BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037819
(377 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IBD|A Chain A, Crystal Structure Of A Cytochrome P450 2b6 Genetic Variant
In Complex With The Inhibitor
4-(4-Chlorophenyl)imidazole
pdb|3QOA|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-Benzylpyridine.
pdb|3QU8|A Chain A, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|B Chain B, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|C Chain C, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|D Chain D, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|E Chain E, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3QU8|F Chain F, Crystal Structure Of A Human Cytochrome P450 2b6
(Y226hK262R) IN Complex With The Inhibitor
4-(4-Nitrobenzyl)pyridine.
pdb|3UA5|A Chain A, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
pdb|3UA5|B Chain B, Crystal Structure Of P450 2b6 (Y226hK262R) IN COMPLEX WITH
TWO Molecules Of Amlodipine
Length = 476
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 85/306 (27%), Positives = 137/306 (44%), Gaps = 20/306 (6%)
Query: 60 TLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGW 119
++ NII + FGKRF + + L ++F +T +++ VF + F G +L G
Sbjct: 154 SITANIICSIVFGKRFHYQDQEFLKML-NLFYQTFSLISSVFGQLFELFSG-FLKHFPGA 211
Query: 120 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYYI 170
+R++ N + + +E H LDP P+ DLID L+ SN S +
Sbjct: 212 HRQVYKNLQEINAYIGHSVEKHRETLDPSAPR-----DLIDTYLLHMEKEKSNAHSEFSH 266
Query: 171 KKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTR 228
+ L ++ A T+T TL + ++K ++V +E+ V+ + D +
Sbjct: 267 QNLNLNTLSLFFAGTETTSTTLRYGFLLMLKYPHVAERVYREIEQVIGPHRPPELHDRAK 326
Query: 229 LEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ Y +AV+ E RF +P T+ GY IP T VF+ + D ++KP
Sbjct: 327 MPYTEAVIYEIQRFSDLLPMGVPHIVTQHTSFRGYIIPKDTEVFLILSTALHDPHYFEKP 386
Query: 288 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRG 347
D F P+ F+ +N + FIPF G+RIC G IA + L +L F P
Sbjct: 387 DAFNPDHFLDANGALKKTE-AFIPFSLGKRICLGEGIARAELFLFFTTILQNFSMASPVA 445
Query: 348 MEIDDL 353
E DL
Sbjct: 446 PEDIDL 451
>pdb|3C6G|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3C6G|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D3
pdb|3DL9|A Chain A, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
pdb|3DL9|B Chain B, Crystal Structure Of Cyp2r1 In Complex With
1-Alpha-Hydroxy- Vitamin D2
Length = 479
Score = 99.8 bits (247), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 152/340 (44%), Gaps = 30/340 (8%)
Query: 51 PINLSEMAMTLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAET--QAMVGRVFFRDCLPF 108
P + ++ + NI + FG+RF E T + +F+E A VF + P+
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDT-DFQHMIELFSENVELAASASVFLYNAFPW 208
Query: 109 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLL------VS 162
+G G +++L N + +LIE ++P++ + +D L +
Sbjct: 209 IGILP---FGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGKN 263
Query: 163 NRRSWYYIKKLIFP--DENIAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGF 220
+ S + + LIF + IA T+T L WA+ + +VQKE+ ++ G
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK 323
Query: 221 VDEDDLTRLEYLKAVVKETMRF---QPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAI 277
DD ++ Y +AV+ E +RF P F T+E V+ GY IP TTV N+ ++
Sbjct: 324 PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF--HATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 278 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLL 337
D + W P+ F PERF+ S+ + +PF GRR C G +A + L LL
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
Query: 338 YKFDWTMPRGMEIDDLDYDVRP--GFTQHKKNPLLLAATK 375
+F P +L D++P G T + P L+ A +
Sbjct: 441 QRFHLHFPH-----ELVPDLKPRLGMTL-QPQPYLICAER 474
>pdb|3CZH|A Chain A, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
pdb|3CZH|B Chain B, Crystal Structure Of Cyp2r1 In Complex With Vitamin D2
Length = 481
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/340 (27%), Positives = 152/340 (44%), Gaps = 30/340 (8%)
Query: 51 PINLSEMAMTLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAET--QAMVGRVFFRDCLPF 108
P + ++ + NI + FG+RF E T + +F+E A VF + P+
Sbjct: 150 PFDFKQLITNAVSNITNLIIFGERFTYEDT-DFQHMIELFSENVELAASASVFLYNAFPW 208
Query: 109 VGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLL------VS 162
+G G +++L N + +LIE ++P++ + +D L +
Sbjct: 209 IGILP---FGKHQQLFRNAAVVYDFLSRLIEKASVNRKPQLPQH--FVDAYLDEMDQGKN 263
Query: 163 NRRSWYYIKKLIFP--DENIAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGF 220
+ S + + LIF + IA T+T L WA+ + +VQKE+ ++ G
Sbjct: 264 DPSSTFSKENLIFSVGELIIAGTETTTNVLRWAILFMALYPNIQGQVQKEIDLIMGPNGK 323
Query: 221 VDEDDLTRLEYLKAVVKETMRF---QPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAI 277
DD ++ Y +AV+ E +RF P F T+E V+ GY IP TTV N+ ++
Sbjct: 324 PSWDDKCKMPYTEAVLHEVLRFCNIVPLGIF--HATSEDAVVRGYSIPKGTTVITNLYSV 381
Query: 278 GRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLL 337
D + W P+ F PERF+ S+ + +PF GRR C G +A + L LL
Sbjct: 382 HFDEKYWRDPEVFHPERFLDSSGYFAKKE-ALVPFSLGRRHCLGEHLARMEMFLFFTALL 440
Query: 338 YKFDWTMPRGMEIDDLDYDVRP--GFTQHKKNPLLLAATK 375
+F P +L D++P G T + P L+ A +
Sbjct: 441 QRFHLHFPH-----ELVPDLKPRLGMTL-QPQPYLICAER 474
>pdb|2HI4|A Chain A, Crystal Structure Of Human Microsomal P450 1a2 In Complex
With Alpha-Naphthoflavone
Length = 495
Score = 99.4 bits (246), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 92/343 (26%), Positives = 155/343 (45%), Gaps = 42/343 (12%)
Query: 27 MIEKISKLSAAPAAADNDYVSSEAPINLSEMAMTLIRNIIFRVGFGKRF---EDEGTATV 83
+I ++ +L A P D P N + + N+I + FG+ F DE + V
Sbjct: 148 LISRLQELMAGPGHFD--------PYN---QVVVSVANVIGAMCFGQHFPESSDEMLSLV 196
Query: 84 SRLHSVFAETQAMVGRVFFRDCLPFV-GCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHL 142
H F ET + + F L ++ L +N+R Q+ +++H
Sbjct: 197 KNTHE-FVETASSGNPLDFFPILRYLPNPALQRFKAFNQRFL-------WFLQKTVQEHY 248
Query: 143 -DPKRPKVAEQEDLIDVLLVSNRRSWYYIKKLIFPDENI---------AATDTIKVTLEW 192
D + V D+ L +++ LI P E I A DT+ + W
Sbjct: 249 QDFDKNSV---RDITGALFKHSKKGPRASGNLI-PQEKIVNLVNDIFGAGFDTVTTAISW 304
Query: 193 AMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPAAQF-LPR 251
++ L+ E +K+QKE+ V+ + D +L YL+A + ET R F +P
Sbjct: 305 SLMYLVTKPEIQRKIQKELDTVIGRERRPRLSDRPQLPYLEAFILETFRHSSFLPFTIPH 364
Query: 252 ETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV---GSNIDMGGQNFE 308
TT ++G++IP K VFVN + D ++W+ P EF PERF+ G+ I+ +
Sbjct: 365 STTRDTTLNGFYIPKKCCVFVNQWQVNHDPELWEDPSEFRPERFLTADGTAINKPLSE-K 423
Query: 309 FIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ FG G+R C G +A + L LA LL + ++++P G+++D
Sbjct: 424 MMLFGMGKRRCIGEVLAKWEIFLFLAILLQQLEFSVPPGVKVD 466
>pdb|3TK3|A Chain A, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|B Chain B, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|C Chain C, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
pdb|3TK3|D Chain D, Cytochrome P450 2b4 Mutant L437a In Complex With
4-(4-Chlorophenyl) Imidazole
Length = 476
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 87/306 (28%), Positives = 139/306 (45%), Gaps = 20/306 (6%)
Query: 60 TLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGW 119
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 120 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYYI 170
+R++ N + + Q +E H LDP P+ D IDV L+ S+ S ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 171 KKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTR 228
+ LI ++ A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 229 LEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ Y AV+ E R F +P T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 288 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRG 347
+ F P F+ +N + +N F+PF G+RICAG IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICAGEGIARTELFLFFTTILQNFSIASPVP 445
Query: 348 MEIDDL 353
E DL
Sbjct: 446 PEDIDL 451
>pdb|3E4E|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E4E|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor 4-
Methylpyrazole
pdb|3E6I|A Chain A, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3E6I|B Chain B, Human Cytochrome P450 2e1 In Complex With The Inhibitor
Indazole
pdb|3GPH|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3GPH|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Decanoic Acid
pdb|3KOH|A Chain A, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3KOH|B Chain B, Cytochrome P450 2e1 With Omega-Imidazolyl Octanoic Acid
pdb|3LC4|A Chain A, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3LC4|B Chain B, Human Cytochrome P450 2e1 In Complex With
Omega-Imidazolyl-Dodecanoic Acid
pdb|3T3Z|A Chain A, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|B Chain B, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|C Chain C, Human Cytochrome P450 2e1 In Complex With Pilocarpine
pdb|3T3Z|D Chain D, Human Cytochrome P450 2e1 In Complex With Pilocarpine
Length = 476
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 93/354 (26%), Positives = 153/354 (43%), Gaps = 38/354 (10%)
Query: 18 QVQTDEIFRMIEKISKLSAAPAAADNDYVSSEAPINLSEMAMTLIRNIIFRVGFGKRFED 77
++Q + F ++E + K P D ++ AP N+ I +I+FR F D
Sbjct: 125 RIQREAHF-LLEALRKTQGQPF--DPTFLIGCAPCNV-------IADILFRKHF-----D 169
Query: 78 EGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQL 137
RL +F E ++ + + F +L L G +R++ N ++ + +
Sbjct: 170 YNDEKFLRLMYLFNENFHLLSTPWLQLYNNFPS-FLHYLPGSHRKVIKNVAEVKEYVSER 228
Query: 138 IEDH---LDPKRPKVAEQEDLIDVLLVSNRRSWYYIKKL--------IFPDENIAATDTI 186
+++H LDP P+ DL D LLV + + ++L D A T+T
Sbjct: 229 VKEHHQSLDPNCPR-----DLTDCLLVEMEKEKHSAERLYTMDGITVTVADLFFAGTETT 283
Query: 187 KVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRF-QPA 245
TL + + LMK E +K+ +E+ V+ D + Y+ AVV E RF
Sbjct: 284 STTLRYGLLILMKYPEIEEKLHEEIDRVIGPSRIPAIKDRQEMPYMDAVVHEIQRFITLV 343
Query: 246 AQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQ 305
LP E T + GY IP T V + ++ D Q + P++F PE F+ N
Sbjct: 344 PSNLPHEATRDTIFRGYLIPKGTVVVPTLDSVLYDNQEFPDPEKFKPEHFLNENGKFKYS 403
Query: 306 NFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDYDVRP 359
++ F PF G+R+CAG +A + L L +L F+ +D D D+ P
Sbjct: 404 DY-FKPFSTGKRVCAGEGLARMELFLLLCAILQHFNLK----PLVDPKDIDLSP 452
>pdb|4I8V|A Chain A, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|B Chain B, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|C Chain C, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
pdb|4I8V|D Chain D, Human Cytochrome P450 1a1 In Complex With
Alpha-naphthoflavone
Length = 491
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 57/173 (32%), Positives = 90/173 (52%), Gaps = 2/173 (1%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A DT+ + W++ L+ N +K+Q+E+ V+ D + L Y++A + ET
Sbjct: 290 AGFDTVTTAISWSLMYLVMNPRVQRKIQEELDTVIGRSRRPRLSDRSHLPYMEAFILETF 349
Query: 241 RFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN 299
R F +P TT + G++IP VFVN I D ++W P EF+PERF+ +
Sbjct: 350 RHSSFVPFTIPHSTTRDTSLKGFYIPKGRCVFVNQWQINHDQKLWVNPSEFLPERFLTPD 409
Query: 300 IDMGGQNFE-FIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ E I FG G+R C G IA V L LA LL + ++++P G+++D
Sbjct: 410 GAIDKVLSEKVIIFGMGKRKCIGETIARWEVFLFLAILLQRVEFSVPLGVKVD 462
>pdb|1PO5|A Chain A, Structure Of Mammalian Cytochrome P450 2b4
Length = 476
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 20/319 (6%)
Query: 47 SSEAPINLSEMAMTLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCL 106
S A ++ + + ++ NII + FGKRF D RL +F ++ +++ +
Sbjct: 141 SKGALLDNTLLFHSITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFE 199
Query: 107 PFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV-- 161
F G +L G +R++ N + + Q +E H LDP P+ D IDV L+
Sbjct: 200 LFSG-FLKHFPGTHRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRM 253
Query: 162 ----SNRRSWYYIKKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVV 215
S+ S ++ + LI ++ A T+T TL + ++K ++VQKE+ V+
Sbjct: 254 EKDKSDPSSEFHHQNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVI 313
Query: 216 KDKGFVDEDDLTRLEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNV 274
DD ++ Y AV+ E R F +P T+ GY IP T VF +
Sbjct: 314 GSHRPPALDDRAKMPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVL 373
Query: 275 LAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALA 334
+ D + ++ P+ F P F+ +N + +N F+PF G+RIC G IA + L
Sbjct: 374 SSALHDPRYFETPNTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFT 432
Query: 335 NLLYKFDWTMPRGMEIDDL 353
+L F P E DL
Sbjct: 433 TILQNFSIASPVPPEDIDL 451
>pdb|1SUO|A Chain A, Structure Of Mammalian Cytochrome P450 2b4 With Bound
4-(4- Chlorophenyl)imidazole
pdb|2BDM|A Chain A, Structure Of Cytochrome P450 2b4 With Bound Bifonazole
pdb|3G5N|A Chain A, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|B Chain B, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|C Chain C, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G5N|D Chain D, Triple Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|A Chain A, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|B Chain B, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|C Chain C, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3G93|D Chain D, Single Ligand Occupancy Crystal Structure Of Cytochrome
P450 Complex With The Inhibitor
1-Biphenyl-4-Methyl-1h-Imidazole
pdb|3KW4|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Ticlopidine
pdb|3ME6|A Chain A, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|B Chain B, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|C Chain C, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3ME6|D Chain D, Crystal Structure Of Cytochrome 2b4 In Complex With The
Anti-Platelet Drug Clopidogrel
pdb|3MVR|A Chain A, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3MVR|B Chain B, Crystal Structure Of Cytochrome P450 2b4-H226y In A Closed
Conformation
pdb|3R1A|A Chain A, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|B Chain B, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|C Chain C, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|D Chain D, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|E Chain E, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|F Chain F, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|G Chain G, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1A|H Chain H, Closed Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|A Chain A, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|B Chain B, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|C Chain C, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3R1B|D Chain D, Open Crystal Structure Of Cytochrome P450 2b4 Covalently
Bound To The Mechanism-Based Inactivator
Tert-Butylphenylacetylene
pdb|3TMZ|A Chain A, Crystal Structure Of P450 2b4(H226y) In Complex With
Amlodipine
pdb|3UAS|A Chain A, Cytochrome P450 2b4 Covalently Bound To The
Mechanism-based Inactivator 9-ethynylphenanthrene
Length = 476
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 20/306 (6%)
Query: 60 TLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGW 119
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 120 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYYI 170
+R++ N + + Q +E H LDP P+ D IDV L+ S+ S ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 171 KKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTR 228
+ LI ++ A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 229 LEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ Y AV+ E R F +P T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 288 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRG 347
+ F P F+ +N + +N F+PF G+RIC G IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
Query: 348 MEIDDL 353
E DL
Sbjct: 446 PEDIDL 451
>pdb|4H1N|A Chain A, Crystal Structure Of P450 2b4 F297a Mutant In Complex With
Anti- Platelet Drug Clopidogrel
Length = 479
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 20/306 (6%)
Query: 60 TLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGW 119
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 120 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYYI 170
+R++ N + + Q +E H LDP P+ D IDV L+ S+ S ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 171 KKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTR 228
+ LI ++ A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFAAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 229 LEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ Y AV+ E R F +P T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 288 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRG 347
+ F P F+ +N + +N F+PF G+RIC G IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
Query: 348 MEIDDL 353
E DL
Sbjct: 446 PEDIDL 451
>pdb|2Q6N|A Chain A, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|B Chain B, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|C Chain C, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|D Chain D, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|E Chain E, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|F Chain F, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
pdb|2Q6N|G Chain G, Structure Of Cytochrome P450 2b4 With Bound 1-(4-
Cholorophenyl)imidazole
Length = 478
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 86/306 (28%), Positives = 138/306 (45%), Gaps = 20/306 (6%)
Query: 60 TLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGW 119
++ NII + FGKRF D RL +F ++ +++ + F G +L G
Sbjct: 154 SITSNIICSIVFGKRF-DYKDPVFLRLLDLFFQSFSLISSFSSQVFELFSG-FLKYFPGT 211
Query: 120 NRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYYI 170
+R++ N + + Q +E H LDP P+ D IDV L+ S+ S ++
Sbjct: 212 HRQIYRNLQEINTFIGQSVEKHRATLDPSNPR-----DFIDVYLLRMEKDKSDPSSEFHH 266
Query: 171 KKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTR 228
+ LI ++ A T+T TL + ++K ++VQKE+ V+ DD +
Sbjct: 267 QNLILTVLSLFFAGTETTSTTLRYGFLLMLKYPHVTERVQKEIEQVIGSHRPPALDDRAK 326
Query: 229 LEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ Y AV+ E R F +P T+ GY IP T VF + + D + ++ P
Sbjct: 327 MPYTDAVIHEIQRLGDLIPFGVPHTVTKDTQFRGYVIPKNTEVFPVLSSALHDPRYFETP 386
Query: 288 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRG 347
+ F P F+ +N + +N F+PF G+RIC G IA + L +L F P
Sbjct: 387 NTFNPGHFLDANGALK-RNEGFMPFSLGKRICLGEGIARTELFLFFTTILQNFSIASPVP 445
Query: 348 MEIDDL 353
E DL
Sbjct: 446 PEDIDL 451
>pdb|1TQN|A Chain A, Crystal Structure Of Human Microsomal P450 3a4
Length = 486
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A +T L + M L + + +K+Q+E+ V+ +K D + ++EYL VV ET+
Sbjct: 284 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 343
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P A L R + I+G IP V + A+ RD + W +P++F+PERF N
Sbjct: 344 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 403
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDW 342
D + + PFG+G R C G+ A+ ++LAL +L F +
Sbjct: 404 D-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 444
>pdb|3UA1|A Chain A, Crystal Structure Of The Cytochrome
P4503a4-Bromoergocryptine Complex
pdb|3TJS|A Chain A, Crystal Structure Of The Complex Between Human Cytochrome
P450 3a4 And Desthiazolylmethyloxycarbonyl Ritonavir
Length = 487
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A +T L + M L + + +K+Q+E+ V+ +K D + ++EYL VV ET+
Sbjct: 285 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 344
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P A L R + I+G IP V + A+ RD + W +P++F+PERF N
Sbjct: 345 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 404
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDW 342
D + + PFG+G R C G+ A+ ++LAL +L F +
Sbjct: 405 D-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 445
>pdb|1W0E|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0F|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|1W0G|A Chain A, Crystal Structure Of Human Cytochrome P450 3a4
pdb|2J0D|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2J0D|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Erythromycin
pdb|2V0M|A Chain A, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|B Chain B, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|C Chain C, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|2V0M|D Chain D, Crystal Structure Of Human P450 3a4 In Complex With
Ketoconazole
pdb|3NXU|A Chain A, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
pdb|3NXU|B Chain B, Crystal Structure Of Human Cytochrome P4503a4 Bound To An
Inhibitor Ritonavir
Length = 485
Score = 93.6 bits (231), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 53/162 (32%), Positives = 85/162 (52%), Gaps = 1/162 (0%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A +T L + M L + + +K+Q+E+ V+ +K D + ++EYL VV ET+
Sbjct: 283 AGYETTSSVLSFIMYELATHPDVQQKLQEEIDAVLPNKAPPTYDTVLQMEYLDMVVNETL 342
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P A L R + I+G IP V + A+ RD + W +P++F+PERF N
Sbjct: 343 RLFPIAMRLERVCKKDVEINGMFIPKGVVVMIPSYALHRDPKYWTEPEKFLPERFSKKNK 402
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDW 342
D + + PFG+G R C G+ A+ ++LAL +L F +
Sbjct: 403 D-NIDPYIYTPFGSGPRNCIGMRFALMNMKLALIRVLQNFSF 443
>pdb|3K9V|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9V|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Chaps
pdb|3K9Y|A Chain A, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
pdb|3K9Y|B Chain B, Crystal Structure Of Rat Mitochondrial P450 24a1 S57d In
Complex With Cymal-5
Length = 482
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 87/163 (53%), Gaps = 2/163 (1%)
Query: 179 NIAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKE 238
+AA +T +L W + NL +N +A +++ +EV+ V+ D +DL + YLKA +KE
Sbjct: 292 QLAAVETTANSLMWILYNLSRNPQAQRRLLQEVQSVLPDNQTPRAEDLRNMPYLKACLKE 351
Query: 239 TMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 298
+MR P+ F R + V+ Y +P T + +N +G ++ +F PER++
Sbjct: 352 SMRLTPSVPFTTRTLDKPTVLGEYALPKGTVLTLNTQVLGSSEDNFEDSHKFRPERWLQK 411
Query: 299 NIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
+ F +PFG G+R+C G +A + LAL ++ K+D
Sbjct: 412 EKKINP--FAHLPFGIGKRMCIGRRLAELQLHLALCWIIQKYD 452
>pdb|1PQ2|A Chain A, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|1PQ2|B Chain B, Crystal Structure Of Human Drug Metabolizing Cytochrome
P450 2c8
pdb|2NNH|A Chain A, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNH|B Chain B, Cyp2c8dh Complexed With 2 Molecules Of 9-Cis Retinoic Acid
pdb|2NNI|A Chain A, Cyp2c8dh Complexed With Montelukast
pdb|2NNJ|A Chain A, Cyp2c8dh Complexed With Felodipine
pdb|2VN0|A Chain A, Cyp2c8dh Complexed With Troglitazone
Length = 476
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 89/346 (25%), Positives = 151/346 (43%), Gaps = 42/346 (12%)
Query: 22 DEIFRMIEKISKLSAAPAAADNDYVSSEAPINLSEMAMTLIRNIIFRVGFGKRFEDEGTA 81
+E ++E++ K A+P D ++ AP N +I V F KRF D
Sbjct: 129 EEAHCLVEELRKTKASPC--DPTFILGCAPCN-----------VICSVVFQKRF-DYKDQ 174
Query: 82 TVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH 141
L F E ++ + + C F +D G + ++ N + ++ +++H
Sbjct: 175 NFLTLMKRFNENFRILNSPWIQVCNNF-PLLIDCFPGTHNKVLKNVALTRSYIREKVKEH 233
Query: 142 ---LDPKRPKVAEQEDLIDVLLVS------NRRSWYYIKKLI--FPDENIAATDTIKVTL 190
LD P+ D ID L+ N++S + I+ L+ D +A T+T TL
Sbjct: 234 QASLDVNNPR-----DFIDCFLIKMEQEKDNQKSEFNIENLVGTVADLFVAGTETTSTTL 288
Query: 191 EWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQ---PAAQ 247
+ + L+K+ E KVQ+E+ +V+ D + + Y AVV E R+ P
Sbjct: 289 RYGLLLLLKHPEVTAKVQEEIDHVIGRHRSPCMQDRSHMPYTDAVVHEIQRYSDLVPTG- 347
Query: 248 FLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNF 307
+P T Y IP TT+ + ++ D + + P+ F P F+ N + ++
Sbjct: 348 -VPHAVTTDTKFRNYLIPKGTTIMALLTSVLHDDKEFPNPNIFDPGHFLDKNGNFKKSDY 406
Query: 308 EFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDL 353
F+PF AG+RICAG +A + L L +L F+ +DDL
Sbjct: 407 -FMPFSAGKRICAGEGLARMELFLFLTTILQNFNLK-----SVDDL 446
>pdb|3QM4|A Chain A, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3QM4|B Chain B, Human Cytochrome P450 (Cyp) 2d6 - Prinomastat Complex
pdb|3TBG|A Chain A, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|B Chain B, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|C Chain C, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TBG|D Chain D, Human Cytochrome P450 2d6 With Two Thioridazines Bound In
Active Site
pdb|3TDA|A Chain A, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|B Chain B, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|C Chain C, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
pdb|3TDA|D Chain D, Competitive Replacement Of Thioridazine By Prinomastat In
Crystals Of Cytochrome P450 2d6
Length = 479
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 79/301 (26%), Positives = 130/301 (43%), Gaps = 26/301 (8%)
Query: 62 IRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNR 121
+ N+I + G+RFE + + L + G F R+ L V L +
Sbjct: 160 VSNVIASLTCGRRFEYDDPRFLRLLDLAQEGLKEESG--FLREVLNAVPVLLHIPALAGK 217
Query: 122 RLRNNFSDCDKVYQQLIEDHL--DPKRPKVAEQEDLIDVLLVSNRRSWYYIKKLIFPDEN 179
LR + ++ + L E + DP +P DL + L ++ + F DEN
Sbjct: 218 VLRFQKAFLTQLDELLTEHRMTWDPAQPP----RDLTEAFLAEMEKAKGNPES-SFNDEN 272
Query: 180 I---------AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLE 230
+ A T TL W + ++ + + ++VQ+E+ V+ + D +
Sbjct: 273 LRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGDQAHMP 332
Query: 231 YLKAVVKETMRFQPAAQFLPRETTERCV-IDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 289
Y AV+ E RF T R + + G+ IP TT+ N+ ++ +D VW+KP
Sbjct: 333 YTTAVIHEVQRFGDIVPLGVTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVWEKPFR 392
Query: 290 FIPERFVGSNIDMGGQNFE---FIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPR 346
F PE F +D G + F+PF AGRR C G P+A + L +LL F +++P
Sbjct: 393 FHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFSFSVPT 448
Query: 347 G 347
G
Sbjct: 449 G 449
>pdb|4GQS|A Chain A, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|B Chain B, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|C Chain C, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
pdb|4GQS|D Chain D, Structure Of Human Microsomal Cytochrome P450 (cyp) 2c19
Length = 477
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 90/347 (25%), Positives = 148/347 (42%), Gaps = 41/347 (11%)
Query: 27 MIEKISKLSAAPAAADNDYVSSEAPINLSEMAMTLIRNIIFRVGFGKRFEDEGTATVSRL 86
++E++ K A+P D ++ AP N +I + F KRF D L
Sbjct: 135 LVEELRKTKASPC--DPTFILGCAPCN-----------VICSIIFQKRF-DYKDQQFLNL 180
Query: 87 HSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LD 143
E +V + + C F +D G + +L N + + + +++H +D
Sbjct: 181 MEKLNENIRIVSTPWIQICNNF-PTIIDYFPGTHNKLLKNLAFMESDILEKVKEHQESMD 239
Query: 144 PKRPKVAEQEDLIDVLLV------SNRRSWYYIKKLIFPDENI--AATDTIKVTLEWAMT 195
P+ D ID L+ N++S + I+ L+ ++ A T+T TL +A+
Sbjct: 240 INNPR-----DFIDCFLIKMEKEKQNQQSEFTIENLVITAADLLGAGTETTSTTLRYALL 294
Query: 196 NLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRF---QPAAQFLPRE 252
L+K+ E KVQ+E+ VV D + Y AVV E R+ P + LP
Sbjct: 295 LLLKHPEVTAKVQEEIERVVGRNRSPCMQDRGHMPYTDAVVHEVQRYIDLIPTS--LPHA 352
Query: 253 TTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPF 312
T Y IP TT+ ++ ++ D + + P+ F P F+ + N+ F+PF
Sbjct: 353 VTCDVKFRNYLIPKGTTILTSLTSVLHDNKEFPNPEMFDPRHFLDEGGNFKKSNY-FMPF 411
Query: 313 GAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDYDVRP 359
AG+RIC G +A + L L +L F+ ID D D P
Sbjct: 412 SAGKRICVGEGLARMELFLFLTFILQNFNLK----SLIDPKDLDTTP 454
>pdb|2F9Q|A Chain A, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|B Chain B, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|C Chain C, Crystal Structure Of Human Cytochrome P450 2d6
pdb|2F9Q|D Chain D, Crystal Structure Of Human Cytochrome P450 2d6
Length = 479
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/186 (30%), Positives = 88/186 (47%), Gaps = 17/186 (9%)
Query: 175 FPDENI---------AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDD 225
F DEN+ A T TL W + ++ + + ++VQ+E+ V+ + D
Sbjct: 268 FNDENLRIVVADLFSAGMVTTSTTLAWGLLLMILHPDVQRRVQQEIDDVIGQVRRPEMGD 327
Query: 226 LTRLEYLKAVVKETMRFQPAAQFLPRETTERCV-IDGYHIPAKTTVFVNVLAIGRDGQVW 284
+ Y AV+ E RF T R + + G+ IP TT+ N+ ++ +D VW
Sbjct: 328 QAHMPYTTAVIHEVQRFGDIVPLGMTHMTSRDIEVQGFRIPKGTTLITNLSSVLKDEAVW 387
Query: 285 DKPDEFIPERFVGSNIDMGGQNFE---FIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
+KP F PE F +D G + F+PF AGRR C G P+A + L +LL F
Sbjct: 388 EKPFRFHPEHF----LDAQGHFVKPEAFLPFSAGRRACLGEPLARMELFLFFTSLLQHFS 443
Query: 342 WTMPRG 347
+++P G
Sbjct: 444 FSVPTG 449
>pdb|3RUK|A Chain A, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|B Chain B, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|C Chain C, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3RUK|D Chain D, Human Cytochrome P450 Cyp17a1 In Complex With Abiraterone
pdb|3SWZ|A Chain A, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|B Chain B, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|C Chain C, Human Cytochrome P450 17a1 In Complex With Tok-001
pdb|3SWZ|D Chain D, Human Cytochrome P450 17a1 In Complex With Tok-001
Length = 494
Score = 85.9 bits (211), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 89/176 (50%), Gaps = 2/176 (1%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A +T ++W + L+ N + KK+ +E+ V D RL L+A ++E +
Sbjct: 284 AGVETTTSVVKWTLAFLLHNPQVKKKLYEEIDQNVGFSRTPTISDRNRLLLLEATIREVL 343
Query: 241 RFQPAAQFL-PRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG-S 298
R +P A L P + I + + T V +N+ A+ + + W +PD+F+PERF+ +
Sbjct: 344 RLRPVAPMLIPHKANVDSSIGEFAVDKGTEVIINLWALHHNEKEWHQPDQFMPERFLNPA 403
Query: 299 NIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLD 354
+ + ++PFGAG R C G +A + L +A LL +FD +P ++ L+
Sbjct: 404 GTQLISPSVSYLPFGAGPRSCIGEILARQELFLIMAWLLQRFDLEVPDDGQLPSLE 459
>pdb|4DVQ|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4DVQ|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Deoxycorticosterone
pdb|4FDH|A Chain A, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|B Chain B, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|C Chain C, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|D Chain D, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|E Chain E, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|F Chain F, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|G Chain G, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|H Chain H, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|I Chain I, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|J Chain J, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|K Chain K, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
pdb|4FDH|L Chain L, Structure Of Human Aldosterone Synthase, Cyp11b2, In
Complex With Fadrozole
Length = 483
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 67/260 (25%), Positives = 118/260 (45%), Gaps = 21/260 (8%)
Query: 71 FGKRF----EDEGTATVSRLHSVFAETQAMVGRVFFRDCL-----PFVGCWLDSLTGWNR 121
FG+R +A+++ LH++ ++ V +F L P V W + W+
Sbjct: 179 FGERLGLVGHSPSSASLNFLHALEVMFKSTVQLMFMPRSLSRWISPKV--WKEHFEAWDC 236
Query: 122 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLVSNRRSWYYIKKLIFPDENIA 181
+ + K+YQ+L + RP+ ++ LL+ S IK +
Sbjct: 237 IFQYGDNCIQKIYQELAFN-----RPQ--HYTGIVAELLLKAELSLEAIKANSM-ELTAG 288
Query: 182 ATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMR 241
+ DT L + L +N + + +++E + T L L+A +KET+R
Sbjct: 289 SVDTTAFPLLMTLFELARNPDVQQILRQESLAAAASISEHPQKATTELPLLRAALKETLR 348
Query: 242 FQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNID 301
P FL R + V+ YHIPA T V V + ++GR+ ++ +P+ + P+R++ +I
Sbjct: 349 LYPVGLFLERVVSSDLVLQNYHIPAGTLVQVFLYSLGRNAALFPRPERYNPQRWL--DIR 406
Query: 302 MGGQNFEFIPFGAGRRICAG 321
G+NF +PFG G R C G
Sbjct: 407 GSGRNFHHVPFGFGMRQCLG 426
>pdb|2Q9F|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1 In Complex
With Cholesterol-3-Sulphate
pdb|2Q9G|A Chain A, Crystal Structure Of Human Cytochrome P450 46a1
pdb|3MDM|A Chain A, Thioperamide Complex Of Cytochrome P450 46a1
pdb|3MDR|A Chain A, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDR|B Chain B, Tranylcypromine Complex Of Cytochrome P450 46a1
pdb|3MDT|A Chain A, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDT|B Chain B, Voriconazole Complex Of Cytochrome P450 46a1
pdb|3MDV|A Chain A, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|3MDV|B Chain B, Clotrimazole Complex Of Cytochrome P450 46a1
pdb|4ENH|A Chain A, Crystal Structure Of Human Cytochrome P450 Cyp46a1 With
Fluvoxamine Bound
pdb|4FIA|A Chain A, Crystal Structure Of Human Cyp46a1 P450 With Bicalutamide
Bound
Length = 456
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 82/168 (48%), Gaps = 3/168 (1%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L + + L + E + ++Q EV V+ K ++D +DL RL+YL V+KE+
Sbjct: 253 IAGHETSANHLAFTVMELSRQPEIVARLQAEVDEVIGSKRYLDFEDLGRLQYLSQVLKES 312
Query: 240 MRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN 299
+R P A R E +IDG +P T + + +GR ++ P F P+RF
Sbjct: 313 LRLYPPAWGTFRLLEEETLIDGVRVPGNTPLLFSTYVMGRMDTYFEDPLTFNPDRF---G 369
Query: 300 IDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRG 347
F + PF G R C G A V++ +A LL + ++ + G
Sbjct: 370 PGAPKPRFTYFPFSLGHRSCIGQQFAQMEVKVVMAKLLQRLEFRLVPG 417
>pdb|2P85|A Chain A, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|B Chain B, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|C Chain C, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|D Chain D, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|E Chain E, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|2P85|F Chain F, Structure Of Human Lung Cytochrome P450 2a13 With Indole
Bound In Two Alternate Conformations
pdb|3T3S|A Chain A, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|B Chain B, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|C Chain C, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|D Chain D, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|E Chain E, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|F Chain F, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|G Chain G, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|3T3S|H Chain H, Human Cytochrome P450 2a13 In Complex With Pilocarpine
pdb|4EJG|A Chain A, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|B Chain B, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|C Chain C, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|D Chain D, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|E Chain E, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|F Chain F, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|G Chain G, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJG|H Chain H, Human Cytochrome P450 2a13 In Complex With Nicotine
pdb|4EJH|A Chain A, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|B Chain B, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|C Chain C, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|D Chain D, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|E Chain E, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|F Chain F, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|G Chain G, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJH|H Chain H, Human Cytochrome P450 2a13 In Complex With
4-(Methylnitrosamino)-1-(3- Pyridyl)-1-Butanone (Nnk)
pdb|4EJI|A Chain A, Human Cytochrome P450 2a13 In Complex With Two Molecules
Of 4- (Methylnitrosamino)-1-(3-Puridyl)-1-Butanone
Length = 476
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 80/319 (25%), Positives = 135/319 (42%), Gaps = 42/319 (13%)
Query: 62 IRNIIFRVGFGKRFEDEGTATVSRLHSV---FAETQAMVGRVFFRDCLPFVGCWLDSLTG 118
+ N+I + FG RF+ E +S L + F T G+++ + L G
Sbjct: 156 VSNVISSIVFGDRFDYEDKEFLSLLRMMLGSFQFTATSTGQLY-----EMFSSVMKHLPG 210
Query: 119 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYY 169
++ + + +E + LDP P+ D ID L+ N + +Y
Sbjct: 211 PQQQAFKELQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 170 IKKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
+K L+ N+ A T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 228 RLEYLKAVVKETMRFQPAAQFLPRETTERCVIDG----YHIPAKTTVFVNVLAIGRDGQV 283
++ Y +AV+ E RF LP R D + +P T VF + ++ RD +
Sbjct: 326 KMPYTEAVIHEIQRF---GDMLPMGLAHRVNKDTKFRDFFLPKGTEVFPMLGSVLRDPRF 382
Query: 284 WDKPDEFIPERFVGSNIDMGGQ---NFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ P +F P+ F +D GQ + F+PF G+R C G +A + L ++ F
Sbjct: 383 FSNPRDFNPQHF----LDKKGQFKKSDAFVPFSIGKRYCFGEGLARMELFLFFTTIMQNF 438
Query: 341 DWTMPRGMEIDDLDYDVRP 359
+ P+ + D DV P
Sbjct: 439 RFKSPQSPK----DIDVSP 453
>pdb|3QZ1|A Chain A, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|B Chain B, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|C Chain C, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
pdb|3QZ1|D Chain D, Crystal Structure Of Bovine Steroid Of 21-Hydroxylase
(P450c21)
Length = 496
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 58/184 (31%), Positives = 82/184 (44%), Gaps = 9/184 (4%)
Query: 177 DENIAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGF---VDEDDLTRLEYLK 233
D I T+T TL WA+ L+ + E +++Q+E+ + V D RL L
Sbjct: 286 DLFIGGTETTASTLSWAVAFLLHHPEIQRRLQEELDRELGPGASCSRVTYKDRARLPLLN 345
Query: 234 AVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 292
A + E +R +P LP TT I GY IP V N+ D VW++P EF P
Sbjct: 346 ATIAEVLRLRPVVPLALPHRTTRPSSIFGYDIPEGMVVIPNLQGAHLDETVWEQPHEFRP 405
Query: 293 ERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDD 352
+RF+ G N + FG G R+C G +A + + LA LL F P +
Sbjct: 406 DRFLEP-----GANPSALAFGCGARVCLGESLARLELFVVLARLLQAFTLLPPPVGALPS 460
Query: 353 LDYD 356
L D
Sbjct: 461 LQPD 464
>pdb|1R9O|A Chain A, Crystal Structure Of P4502c9 With Flurbiprofen Bound
Length = 477
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 89/337 (26%), Positives = 146/337 (43%), Gaps = 53/337 (15%)
Query: 27 MIEKISKLSAAPAAADNDYVSSEAPINLSEMAMTLIRNIIFRVGFGKRFEDEGTATVSRL 86
++E++ K A+P D ++ AP N +I + F KRF D L
Sbjct: 135 LVEELRKTKASPC--DPTFILGCAPCN-----------VICSIIFHKRF-DYKDQQFLNL 180
Query: 87 HSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LD 143
E ++ + + C F +D G + +L N + + +++H +D
Sbjct: 181 MEKLNENIKILSSPWIQICNNF-SPIIDYFPGTHNKLLKNVAFMKSYILEKVKEHQESMD 239
Query: 144 PKRPKVAEQEDLIDVLLV------SNRRSWYYIKKLIFPDENIA------ATDTIKVTLE 191
P +D ID L+ N+ S + I+ L EN A T+T TL
Sbjct: 240 MNNP-----QDFIDCFLMKMEKEKHNQPSEFTIESL----ENTAVDLFGAGTETTSTTLR 290
Query: 192 WAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRF---QPAAQF 248
+A+ L+K+ E KVQ+E+ V+ D + + Y AVV E R+ P +
Sbjct: 291 YALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDLLPTS-- 348
Query: 249 LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 308
LP T Y IP TT+ +++ ++ D + + P+ F P F +D GG NF+
Sbjct: 349 LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF----LDEGG-NFK 403
Query: 309 ----FIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
F+PF AG+RIC G +A + L L ++L F+
Sbjct: 404 KSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFN 440
>pdb|1OG2|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG2|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|A Chain A, Structure Of Human Cytochrome P450 Cyp2c9
pdb|1OG5|B Chain B, Structure Of Human Cytochrome P450 Cyp2c9
Length = 475
Score = 81.3 bits (199), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 86/343 (25%), Positives = 149/343 (43%), Gaps = 65/343 (18%)
Query: 27 MIEKISKLSAAPAAADNDYVSSEAPINLSEMAMTLIRNIIFRVGFGKRFEDEGTATVSRL 86
++E++ K A+P D ++ AP N +I + F KRF+ + ++ +
Sbjct: 133 LVEELRKTKASPC--DPTFILGCAPCN-----------VICSIIFHKRFDYKDQQFLNLM 179
Query: 87 HSVFAETQAMVGRVFFRDCLPFVGCW------LDSLTGWNRRLRNNFSDCDKVYQQLIED 140
+ + + P++ + LD G + +L N + + +++
Sbjct: 180 EKLNENIEILSS--------PWIQVYNNFPALLDYFPGTHNKLLKNVAFMKSYILEKVKE 231
Query: 141 H---LDPKRPKVAEQEDLIDVLLV------SNRRSWYYIKKLIFPDENIA------ATDT 185
H +D P +D ID L+ N+ S + I+ L EN A T+T
Sbjct: 232 HQESMDMNNP-----QDFIDCFLMKMEKEKHNQPSEFTIESL----ENTAVDLFGAGTET 282
Query: 186 IKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRF--- 242
TL +A+ L+K+ E KVQ+E+ V+ D + + Y AVV E R+
Sbjct: 283 TSTTLRYALLLLLKHPEVTAKVQEEIERVIGRNRSPCMQDRSHMPYTDAVVHEVQRYIDL 342
Query: 243 QPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDM 302
P + LP T Y IP TT+ +++ ++ D + + P+ F P F +D
Sbjct: 343 LPTS--LPHAVTCDIKFRNYLIPKGTTILISLTSVLHDNKEFPNPEMFDPHHF----LDE 396
Query: 303 GGQNFE----FIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
GG NF+ F+PF AG+RIC G +A + L L ++L F+
Sbjct: 397 GG-NFKKSKYFMPFSAGKRICVGEALAGMELFLFLTSILQNFN 438
>pdb|3EQM|A Chain A, Crystal Structure Of Human Placental Aromatase Cytochrome
P450 In Complex With Androstenedione
pdb|3S79|A Chain A, Human Placental Aromatase Cytochrome P450 (Cyp19a1)
Refined At 2.75 Angstrom
pdb|3S7S|A Chain A, Crystal Structure Of Human Placental Aromatase Complexed
With Breast Cancer Drug Exemestane
pdb|4GL5|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg029 (Compound 4)
pdb|4GL7|A Chain A, Structure Of Human Placental Aromatase Complexed With
Designed Inhibitor Hddg046 (Compound 5)
Length = 503
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 56/189 (29%), Positives = 100/189 (52%), Gaps = 11/189 (5%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IAA DT+ V+L + + + K+ + + KE++ V+ ++ + DD+ +L+ ++ + E+
Sbjct: 305 IAAPDTMSVSLFFMLFLIAKHPNVEEAIIKEIQTVIGERD-IKIDDIQKLKVMENFIYES 363
Query: 240 MRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN 299
MR+QP + R+ E VIDGY + T + +N+ + R + + KP+EF E F N
Sbjct: 364 MRYQPVVDLVMRKALEDDVIDGYPVKKGTNIILNIGRMHRL-EFFPKPNEFTLENF-AKN 421
Query: 300 IDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDL----DY 355
+ F PFG G R CAG IAM +++ L LL +F +G ++ + D
Sbjct: 422 VPYR----YFQPFGFGPRGCAGKYIAMVMMKAILVTLLRRFHVKTLQGQCVESIQKIHDL 477
Query: 356 DVRPGFTQH 364
+ P T++
Sbjct: 478 SLHPDETKN 486
>pdb|1Z10|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z10|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Coumarin Bound
pdb|1Z11|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|1Z11|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With
Methoxsalen Bound
pdb|2FDU|A Chain A, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|B Chain B, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|C Chain C, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDU|D Chain D, Microsomal P450 2a6 With The Inhibitor N,N-Dimethyl(5-
(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|A Chain A, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|B Chain B, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|C Chain C, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDV|D Chain D, Microsomal P450 2a6 With The Inhibitor
N-Methyl(5-(Pyridin- 3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDW|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 With The
Inhibitor (5-(Pyridin-3-Yl)furan-2-Yl)methanamine Bound
pdb|2FDY|A Chain A, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|B Chain B, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|C Chain C, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|2FDY|D Chain D, Microsomal P450 2a6 With The Inhibitor Adrithiol Bound
pdb|3T3R|A Chain A, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|B Chain B, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|C Chain C, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|3T3R|D Chain D, Human Cytochrome P450 2a6 In Complex With Pilocarpine
pdb|4EJJ|A Chain A, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|B Chain B, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|C Chain C, Human Cytochrome P450 2a6 In Complex With Nicotine
pdb|4EJJ|D Chain D, Human Cytochrome P450 2a6 In Complex With Nicotine
Length = 476
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 117/279 (41%), Gaps = 26/279 (9%)
Query: 62 IRNIIFRVGFGKRFEDEGTATVSRLH---SVFAETQAMVGRVFFRDCLPFVGCWLDSLTG 118
+ N+I + FG RF+ + +S L +F T G+++ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 119 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYY 169
++ + + +E + LDP P+ D ID L+ N + +Y
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 170 IKKLIFPDEN--IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
+K L+ N I T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLNLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 228 RLEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 286
++ Y++AV+ E RF L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSN 385
Query: 287 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA 325
P +F P+ F+ + F+PF G+R C G +A
Sbjct: 386 PQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLA 423
>pdb|3PM0|A Chain A, Structural Characterization Of The Complex Between Alpha-
Naphthoflavone And Human Cytochrome P450 1b1 (Cyp1b1)
Length = 507
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 76/307 (24%), Positives = 124/307 (40%), Gaps = 30/307 (9%)
Query: 57 MAMTLIRNIIFRVGFGKRFEDEGTATVSRLHSVFAETQAMVGRVFFRDCLPFVGCWLDSL 116
+ + + N++ V FG R+ + L S E VG D +P WL
Sbjct: 156 LTVVAVANVMSAVCFGCRYSHD-DPEFRELLSHNEEFGRTVGAGSLVDVMP----WLQYF 210
Query: 117 TGWNRRLRNNFSDCDKVYQQLIED----HLDPKRPKVAEQEDLIDVLLVSNRRSW---YY 169
R + F ++ + I D H + RP A + D++D ++S + +
Sbjct: 211 PNPVRTVFREFEQLNRNFSNFILDKFLRHCESLRPGAAPR-DMMDAFILSAEKKAAGDSH 269
Query: 170 IKKLIFPDENIAAT---------DTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGF 220
EN+ AT DT+ L+W + + + +VQ E+ VV
Sbjct: 270 GGGARLDLENVPATITDIFGASQDTLSTALQWLLLLFTRYPDVQTRVQAELDQVVGRDRL 329
Query: 221 VDEDDLTRLEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGR 279
D L Y+ A + E MRF +P TT + GYHIP T VFVN ++
Sbjct: 330 PCMGDQPNLPYVLAFLYEAMRFSSFVPVTIPHATTANTSVLGYHIPKDTVVFVNQWSVNH 389
Query: 280 DGQVWDKPDEFIPERFVGS----NIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALAN 335
D W P+ F P RF+ N D+ + + F G+R C G ++ + L ++
Sbjct: 390 DPLKWPNPENFDPARFLDKDGLINKDLTSR---VMIFSVGKRRCIGEELSKMQLFLFISI 446
Query: 336 LLYKFDW 342
L ++ D+
Sbjct: 447 LAHQCDF 453
>pdb|3MZS|A Chain A, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|B Chain B, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|C Chain C, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
pdb|3MZS|D Chain D, Crystal Structure Of Cytochrome P450 Cyp11a1 In Complex
With 22- Hydroxy-Cholesterol
Length = 486
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 88/177 (49%), Gaps = 10/177 (5%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRL----EYLKAVV 236
+T +TL+W + + ++ + +++EV + E D++++ LKA +
Sbjct: 287 GGVNTTSMTLQWHLYEMARSLNVQEMLREEVLNARRQA----EGDISKMLQMVPLLKASI 342
Query: 237 KETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV 296
KET+R P + L R V+ Y IPAKT V V + A+GRD + PD+F P R++
Sbjct: 343 KETLRLHPISVTLQRYPESDLVLQDYLIPAKTLVQVAIYAMGRDPAFFSSPDKFDPTRWL 402
Query: 297 GSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDL 353
+ D+ +F + FG G R C G IA + L L ++L F M ++D +
Sbjct: 403 SKDKDL--IHFRNLGFGWGVRQCVGRRIAELEMTLFLIHILENFKVEMQHIGDVDTI 457
>pdb|3EBS|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3EBS|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
With Phenacetin
pdb|3T3Q|A Chain A, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|B Chain B, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|C Chain C, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
pdb|3T3Q|D Chain D, Human Cytochrome P450 2a6 I208sI300FG301AS369G IN COMPLEX
WITH Pilocarpine
Length = 476
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/279 (23%), Positives = 118/279 (42%), Gaps = 26/279 (9%)
Query: 62 IRNIIFRVGFGKRFEDEGTATVSRLHSV---FAETQAMVGRVFFRDCLPFVGCWLDSLTG 118
+ N+I + FG RF+ + +S L + F T G+++ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGSFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 119 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYY 169
++ + + +E + LDP P+ D ID L+ N + +Y
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 170 IKKLIFPDENI--AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
+K L+ N+ A T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLNLFFAGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 228 RLEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 286
++ Y++AV+ E RF L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMGLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSN 385
Query: 287 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA 325
P +F P+ F+ + F+PF G+R C G +A
Sbjct: 386 PQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLA 423
>pdb|1DT6|A Chain A, Structure Of Mammalian Cytochrome P450 2c5
pdb|1N6B|A Chain A, Microsomal Cytochrome P450 2c5/3lvdh Complex With A
Dimethyl Derivative Of Sulfaphenazole
pdb|1NR6|A Chain A, Microsomal Cytochrome P450 2c53LVDH COMPLEX WITH
DICLOFENAC
Length = 473
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 81/337 (24%), Positives = 149/337 (44%), Gaps = 32/337 (9%)
Query: 27 MIEKISKLSAAPAAADNDYVSSEAPINLSEMAMTLIRNIIFRVGFGKRFEDEGTATVSRL 86
++E++ K +A+P D ++ AP N+ I ++IF F + ++E + L
Sbjct: 134 LVEELRKTNASPC--DPTFILGCAPCNV-------ICSVIFHNRFDYK-DEEFLKLMESL 183
Query: 87 HSVFAETQAMVGRVFFRDCLPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDH---LD 143
H E ++G + + F LD G ++ L N + +++H LD
Sbjct: 184 H----ENVELLGTPWLQVYNNFPA-LLDYFPGIHKTLLKNADYIKNFIMEKVKEHQKLLD 238
Query: 144 PKRPKVAEQEDLIDVLLVSNRRS---WYYIKKLIFPDENI--AATDTIKVTLEWAMTNLM 198
P+ D ID L+ + + ++ L+ ++ A T+T TL +++ L+
Sbjct: 239 VNNPR-----DFIDCFLIKMEQENNLEFTLESLVIAVSDLFGAGTETTSTTLRYSLLLLL 293
Query: 199 KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRF-QPAAQFLPRETTERC 257
K+ E +VQ+E+ V+ D +R+ Y AV+ E RF LP T
Sbjct: 294 KHPEVAARVQEEIERVIGRHRSPCMQDRSRMPYTDAVIHEIQRFIDLLPTNLPHAVTRDV 353
Query: 258 VIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRR 317
Y IP T + ++ ++ D + + P F P F+ + + ++ F+PF AG+R
Sbjct: 354 RFRNYFIPKGTDIITSLTSVLHDEKAFPNPKVFDPGHFLDESGNFKKSDY-FMPFSAGKR 412
Query: 318 ICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLD 354
+C G +A + L L ++L F + +E DLD
Sbjct: 413 MCVGEGLARMELFLFLTSILQNFK--LQSLVEPKDLD 447
>pdb|3DBG|A Chain A, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3DBG|B Chain B, Crystal Structure Of Cytochrome P450 170a1 (Cyp170a1) From
Streptomyces Coelicolor
pdb|3EL3|A Chain A, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
pdb|3EL3|B Chain B, Distinct Monooxygenase And Farnesene Synthase Active Sites
In Cytochrome P450 170a1
Length = 467
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 60/230 (26%), Positives = 103/230 (44%), Gaps = 20/230 (8%)
Query: 120 NRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLVSNRRSWYYIKKLIFPDEN 179
NRR + +D + ++I + +R + +DL+ LL + + I + D+
Sbjct: 213 NRRFNDALADLHLLVDEIIAE----RRASGQKPDDLLTALLEAKDDNGDPIGEQEIHDQV 268
Query: 180 IA----ATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
+A ++TI T+ W + L + E +++ EV V + ED + +L + V
Sbjct: 269 VAILTPGSETIASTIMWLLQALADHPEHADRIRDEVEAVTGGRPVAFED-VRKLRHTGNV 327
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWD-----KPDEF 290
+ E MR +PA L R + GY IPA + + AI RD + +D PD +
Sbjct: 328 IVEAMRLRPAVWVLTRRAVAESELGGYRIPAGADIIYSPYAIQRDPKSYDDNLEFDPDRW 387
Query: 291 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+PER +N+ + PF AG+R C +M + L A L K+
Sbjct: 388 LPER--AANV----PKYAMKPFSAGKRKCPSDHFSMAQLTLITAALATKY 431
>pdb|2PG6|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
pdb|2PG6|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 L240cN297Q
Length = 476
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 26/279 (9%)
Query: 62 IRNIIFRVGFGKRFEDEGTATVSRLH---SVFAETQAMVGRVFFRDCLPFVGCWLDSLTG 118
+ N+I + FG RF+ + +S L +F T G+++ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 119 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYY 169
++ + + +E + LDP P+ D ID L+ N + +Y
Sbjct: 211 PQQQAFQCLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 170 IKKLIFPDEN--IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
+K L+ I T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 228 RLEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 286
++ Y++AV+ E RF L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSN 385
Query: 287 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA 325
P +F P+ F+ + F+PF G+R C G +A
Sbjct: 386 PQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLA 423
>pdb|2PG5|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297q
pdb|2PG5|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297q
Length = 476
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 65/279 (23%), Positives = 116/279 (41%), Gaps = 26/279 (9%)
Query: 62 IRNIIFRVGFGKRFEDEGTATVSRLH---SVFAETQAMVGRVFFRDCLPFVGCWLDSLTG 118
+ N+I + FG RF+ + +S L +F T G+++ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 119 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYY 169
++ + + +E + LDP P+ D ID L+ N + +Y
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 170 IKKLIFPDEN--IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
+K L+ I T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLQLFIGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 228 RLEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 286
++ Y++AV+ E RF L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSN 385
Query: 287 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA 325
P +F P+ F+ + F+PF G+R C G +A
Sbjct: 386 PQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLA 423
>pdb|2PG7|A Chain A, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|B Chain B, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|C Chain C, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
pdb|2PG7|D Chain D, Crystal Structure Of Human Microsomal P450 2a6 N297qI300V
Length = 476
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/279 (22%), Positives = 116/279 (41%), Gaps = 26/279 (9%)
Query: 62 IRNIIFRVGFGKRFEDEGTATVSRLH---SVFAETQAMVGRVFFRDCLPFVGCWLDSLTG 118
+ N+I + FG RF+ + +S L +F T G+++ + L G
Sbjct: 156 VSNVISSIVFGDRFDYKDKEFLSLLRMMLGIFQFTSTSTGQLY-----EMFSSVMKHLPG 210
Query: 119 WNRRLRNNFSDCDKVYQQLIEDH---LDPKRPKVAEQEDLIDVLLV------SNRRSWYY 169
++ + + +E + LDP P+ D ID L+ N + +Y
Sbjct: 211 PQQQAFQLLQGLEDFIAKKVEHNQRTLDPNSPR-----DFIDSFLIRMQEEEKNPNTEFY 265
Query: 170 IKKLIFPDEN--IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
+K L+ + T+T+ TL + LMK+ E KV +E+ V+ +D
Sbjct: 266 LKNLVMTTLQLFVGGTETVSTTLRYGFLLLMKHPEVEAKVHEEIDRVIGKNRQPKFEDRA 325
Query: 228 RLEYLKAVVKETMRFQPAAQF-LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 286
++ Y++AV+ E RF L R + + +P T V+ + ++ RD +
Sbjct: 326 KMPYMEAVIHEIQRFGDVIPMSLARRVKKDTKFRDFFLPKGTEVYPMLGSVLRDPSFFSN 385
Query: 287 PDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA 325
P +F P+ F+ + F+PF G+R C G +A
Sbjct: 386 PQDFNPQHFLNEKGQFKKSD-AFVPFSIGKRNCFGEGLA 423
>pdb|3N9Y|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Y|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With
Cholesterol
pdb|3N9Z|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3N9Z|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 22-
Hydroxycholesterol
pdb|3NA1|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
pdb|3NA1|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20-
Hydroxycholesterol
Length = 487
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 105/232 (45%), Gaps = 12/232 (5%)
Query: 111 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLVSNRRSWYYI 170
W D + W+ FS D +Y Q L K + ++ LL ++ S+ I
Sbjct: 222 TWKDHVAAWDVI----FSKAD-IYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDI 276
Query: 171 KKLIFPDENIAA-TDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRL 229
K + E +A DT +TL+W + + +N + ++ EV + + D + +L
Sbjct: 277 KANV--TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV-LAARHQAQGDMATMLQL 333
Query: 230 -EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 288
LKA +KET+R P + L R V+ Y IPAKT V V + A+GR+ + P+
Sbjct: 334 VPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPE 393
Query: 289 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
F P R++ D F + FG G R C G IA + + L N+L F
Sbjct: 394 NFDPTRWLSK--DKNITYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 443
>pdb|3NA0|A Chain A, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
pdb|3NA0|B Chain B, Crystal Structure Of Human Cyp11a1 In Complex With 20,22-
Dihydroxycholesterol
Length = 471
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/232 (28%), Positives = 107/232 (46%), Gaps = 12/232 (5%)
Query: 111 CWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLVSNRRSWYYI 170
W D + W+ FS D +Y Q L K + ++ LL ++ S+ I
Sbjct: 219 TWKDHVAAWDVI----FSKAD-IYTQNFYWELRQKGSVHHDYRGILYRLLGDSKMSFEDI 273
Query: 171 KKLIFPDENIAA-TDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRL 229
K + E +A DT +TL+W + + +N + ++ EV + + D + +L
Sbjct: 274 KANV--TEMLAGGVDTTSMTLQWHLYEMARNLKVQDMLRAEV-LAARHQAQGDMATMLQL 330
Query: 230 -EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 288
LKA +KET+R P + L R V+ Y IPAKT V V + A+GR+ + P+
Sbjct: 331 VPLLKASIKETLRLHPISVTLQRYLVNDLVLRDYMIPAKTLVQVAIYALGREPTFFFDPE 390
Query: 289 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
F P R++ + ++ F + FG G R C G IA + + L N+L F
Sbjct: 391 NFDPTRWLSKDKNI--TYFRNLGFGWGVRQCLGRRIAELEMTIFLINMLENF 440
>pdb|2VE3|A Chain A, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE3|B Chain B, Retinoic Acid Bound Cyanobacterial Cyp120a1
pdb|2VE4|A Chain A, Substrate Free Cyanobacterial Cyp120a1
pdb|2VE4|B Chain B, Substrate Free Cyanobacterial Cyp120a1
Length = 444
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/171 (25%), Positives = 76/171 (44%), Gaps = 1/171 (0%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A +T+ L L ++++ ++V++E + + E L ++ YL V++E +
Sbjct: 254 AGHETLTSALSSFCLLLGQHSDIRERVRQEQNKLQLSQELTAET-LKKMPYLDQVLQEVL 312
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P RE + C G+H P V + D ++ P++F PERF
Sbjct: 313 RLIPPVGGGFRELIQDCQFQGFHFPKGWLVSYQISQTHADPDLYPDPEKFDPERFTPDGS 372
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
F +PFG G R C G A ++L L+ +FDWT+ G ++
Sbjct: 373 ATHNPPFAHVPFGGGLRECLGKEFARLEMKLFATRLIQQFDWTLLPGQNLE 423
>pdb|3CBD|A Chain A, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
pdb|3CBD|B Chain B, Directed Evolution Of Cytochrome P450 Bm3, To Octane
Monoxygenase 139-3
Length = 455
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 78/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++KV +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKVAEEATRVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + V V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEVMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3KX5|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX5|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 78/176 (44%), Gaps = 6/176 (3%)
Query: 178 ENIAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVK 237
E IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+
Sbjct: 261 ELIAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLN 319
Query: 238 ETMRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERF 295
E +R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 320 EALRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERF 379
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 380 ENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3KX4|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX4|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 65.1 bits (157), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACEGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|2UWH|A Chain A, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|B Chain B, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|C Chain C, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|D Chain D, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|E Chain E, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
pdb|2UWH|F Chain F, Cytochrome P450 Bm3 Mutant In Complex With Palmitic Acid
Length = 458
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|2BMH|A Chain A, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|2BMH|B Chain B, Modeling Protein-Substrate Interactions In The Heme Domain
Of Cytochrome P450bm-3
pdb|1BU7|A Chain A, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|1BU7|B Chain B, Cryogenic Structure Of Cytochrome P450bm-3 Heme Domain
pdb|2J1M|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J1M|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|A Chain A, P450 Bm3 Heme Domain In Complex With Dmso
pdb|2J4S|B Chain B, P450 Bm3 Heme Domain In Complex With Dmso
Length = 455
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3HF2|A Chain A, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
pdb|3HF2|B Chain B, Crystal Structure Of The I401p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 322
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 323 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 383 PS---AIPQHAFKPFGNGQRACPGQQFALHEATLVLGMMLKHFDFEDHTNYELD 433
>pdb|2X7Y|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X7Y|B Chain B, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|A Chain A, P450 Bm3 F87a In Complex With Dmso
pdb|2X80|B Chain B, P450 Bm3 F87a In Complex With Dmso
Length = 455
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3NPL|A Chain A, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
pdb|3NPL|B Chain B, Structure Of Ru(Bpy)2(A-Phen)(K97c) P450 Bm3 Heme Domain,
A Ruthenium Modified P450 Bm3 Mutant
Length = 470
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 322
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 323 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 383 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 433
>pdb|1BVY|A Chain A, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
pdb|1BVY|B Chain B, Complex Of The Heme And Fmn-Binding Domains Of The
Cytochrome P450(Bm-3)
Length = 458
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|2HPD|A Chain A, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|2HPD|B Chain B, Crystal Structure Of Hemoprotein Domain Of P450bm-3, A
Prototype For Microsomal P450's
pdb|1FAG|A Chain A, Structure Of Cytochrome P450
pdb|1FAG|B Chain B, Structure Of Cytochrome P450
pdb|1FAG|C Chain C, Structure Of Cytochrome P450
pdb|1FAG|D Chain D, Structure Of Cytochrome P450
Length = 471
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3BEN|A Chain A, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
pdb|3BEN|B Chain B, Structure Of N-(12-Imidazolyl-Dodecanoyl)-L-Leucine
Inhibitor Bound To The Heme Domain Of Cytochrome
P450-Bm3
Length = 470
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 322
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 323 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 383 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 433
>pdb|3KX3|A Chain A, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
pdb|3KX3|B Chain B, Crystal Structure Of Bacillus Megaterium Bm3 Heme Domain
Mut
Length = 470
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|2IJ2|A Chain A, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
pdb|2IJ2|B Chain B, Atomic Structure Of The Heme Domain Of Flavocytochrome
P450- Bm3
Length = 470
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|2NNB|A Chain A, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
pdb|2NNB|B Chain B, The Q403k Mutnat Heme Domain Of Flavocytochrome P450 Bm3
Length = 471
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGKQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1JPZ|A Chain A, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1JPZ|B Chain B, Crystal Structure Of A Complex Of The Heme Domain Of
P450bm- 3 With N-Palmitoylglycine
pdb|1ZO9|A Chain A, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
pdb|1ZO9|B Chain B, Crystal Structure Of The Wild Type Heme Domain Of P450bm-3
With N- Palmitoylmethionine
Length = 473
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 266 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 324
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 325 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 384
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 385 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 435
>pdb|3M4V|A Chain A, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
pdb|3M4V|B Chain B, Crystal Structure Of The A330p Mutant Of Cytochrome P450
Bm3
Length = 482
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 264 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 322
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 323 LRLWPTAPPFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 383 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 433
>pdb|3PSX|A Chain A, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
pdb|3PSX|B Chain B, Crystal Structure Of The Kt2 Mutant Of Cytochrome P450 Bm3
Length = 487
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L + + L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 269 IAGHETTSGLLSFTLYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 327
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 328 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDEIMVLIPQLHRDKTIWGDDVEEFRPERFEN 387
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 388 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 438
>pdb|1P0X|A Chain A, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0X|B Chain B, F393y Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F P+G G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPYGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|4DUF|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|C Chain C, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
pdb|4DUF|D Chain D, Cytochrome P450 Bm3h-2g9 Mri Sensor Bound To Serotonin
Length = 471
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA ++ L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|4DUD|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUD|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor, No Ligand
pdb|4DUE|A Chain A, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
pdb|4DUE|B Chain B, Cytochrome P450 Bm3h-2g9c6 Mri Sensor Bound To Serotonin
Length = 471
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA ++ L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|4DUC|A Chain A, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
pdb|4DUC|B Chain B, Cytochrome P450 Bm3h-2g9 Mri Sensor, No Ligand
Length = 472
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA ++ L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 264 IAGHESTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 322
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 323 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 382
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 383 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 433
>pdb|1ZO4|A Chain A, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
pdb|1ZO4|B Chain B, Crystal Structure Of A328s Mutant Of The Heme Domain Of
P450bm-3
Length = 473
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 266 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 324
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P + E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 325 LRLWPTSPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 384
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 385 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 435
>pdb|4DU2|B Chain B, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
pdb|4DU2|A Chain A, Cytochrome P450 Bm3h-B7 Mri Sensor Bound To Dopamine
Length = 470
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/280 (25%), Positives = 110/280 (39%), Gaps = 41/280 (14%)
Query: 101 FFRD-CLPFVGCWLDSLTGWNRRLRNNFSD---CDKVYQQLIEDHLDPKRPKVAEQEDLI 156
F+RD PF+ + +L +LR D D+ +Q ED + DL+
Sbjct: 166 FYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQED--------IKVMNDLV 217
Query: 157 DVLLVSNRRSWYYIKKLI--------------FPDENI---------AATDTIKVTLEWA 193
D ++ + S L+ DENI A + L +A
Sbjct: 218 DKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFA 277
Query: 194 MTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPAAQFLPRET 253
+ L+KN ++K +E V+ D + +L+Y+ V+ E +R P A
Sbjct: 278 LYFLVKNPHELQKAAEEAARVLVDP-VPSHKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 336
Query: 254 TERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIP 311
E V+ G Y + + V + + RD VW D +EF PERF + F P
Sbjct: 337 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFENPS---AIPQHAFKP 393
Query: 312 FGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
FG G+R C G A+ L L +L FD+ E+D
Sbjct: 394 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 433
>pdb|3QI8|B Chain B, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
pdb|3QI8|A Chain A, Evolved Variant Of Cytochrome P450 (Bm3, Cyp102a1)
Length = 472
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 264 IAGHETTSGLLTFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 322
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E ++ G Y + + V + + RD VW D +EF PERF
Sbjct: 323 LRIWPTAPAFSLYAKEDTMLGGEYPLEKGDELMVLIPQLHRDKTVWGDDVEEFRPERFEN 382
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 383 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 433
>pdb|3EKB|A Chain A, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
pdb|3EKB|B Chain B, Crystal Structure Of The A264c Mutant Heme Domain Of
Cytochrome P450 Bm3
Length = 470
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
I +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 ICGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1YQP|A Chain A, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
pdb|1YQP|B Chain B, T268n Mutant Cytochrome Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA + L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHENTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1YQO|A Chain A, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1YQO|B Chain B, T268a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA + L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3DGI|A Chain A, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
pdb|3DGI|B Chain B, Crystal Structure Of F87aT268A MUTANT OF CYP BM3
Length = 461
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA + L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1FAH|A Chain A, Structure Of Cytochrome P450
pdb|1FAH|B Chain B, Structure Of Cytochrome P450
Length = 471
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA + L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1ZOA|A Chain A, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
pdb|1ZOA|B Chain B, Crystal Structure Of A328v Mutant Of The Heme Domain Of
P450bm-3 With N-Palmitoylglycine
Length = 473
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 266 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 324
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 325 LRLWPTVPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 384
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 385 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 435
>pdb|2IJ3|A Chain A, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
pdb|2IJ3|B Chain B, Structure Of The A264h Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
I +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IHGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1SMI|A Chain A, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMI|B Chain B, A Single Mutation Of P450 Bm3 Induces The Conformational
Rearrangement Seen Upon Substrate-Binding In Wild-Type
Enzyme
pdb|1SMJ|A Chain A, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|B Chain B, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|C Chain C, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
pdb|1SMJ|D Chain D, Structure Of The A264e Mutant Of Cytochrome P450 Bm3
Complexed With Palmitoleate
Length = 471
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
I +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IEGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1P0W|A Chain A, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0W|B Chain B, F393w Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 77/174 (44%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F P+G G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPWGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3EKF|A Chain A, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKF|B Chain B, Crystal Structure Of The A264q Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
I +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IQGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|2IJ4|A Chain A, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
pdb|2IJ4|B Chain B, Structure Of The A264k Mutant Of Cytochrome P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
I +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IKGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3EKD|A Chain A, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
pdb|3EKD|B Chain B, Crystal Structure Of The A264m Heme Domain Of Cytochrome
P450 Bm3
Length = 470
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
I +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IMGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F PFG G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1JME|A Chain A, Crystal Structure Of Phe393his Cytochrome P450 Bm3
pdb|1JME|B Chain B, Crystal Structure Of Phe393his Cytochrome P450 Bm3
Length = 455
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F P G G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPHGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|1P0V|A Chain A, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
pdb|1P0V|B Chain B, F393a Mutant Heme Domain Of Flavocytochrome P450 Bm3
Length = 455
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 76/174 (43%), Gaps = 6/174 (3%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
IA +T L +A+ L+KN ++K +E V+ D + +L+Y+ V+ E
Sbjct: 263 IAGHETTSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEA 321
Query: 240 MRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVG 297
+R P A E V+ G Y + + V + + RD +W D +EF PERF
Sbjct: 322 LRLWPTAPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFEN 381
Query: 298 SNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
+ F P G G+R C G A+ L L +L FD+ E+D
Sbjct: 382 PS---AIPQHAFKPAGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|4DTW|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTW|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Serotonin
pdb|4DTY|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTY|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor, No Ligand
pdb|4DTZ|A Chain A, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
pdb|4DTZ|B Chain B, Cytochrome P450 Bm3h-8c8 Mri Sensor Bound To Dopamine
Length = 469
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/280 (25%), Positives = 110/280 (39%), Gaps = 41/280 (14%)
Query: 101 FFRD-CLPFVGCWLDSLTGWNRRLRNNFSD---CDKVYQQLIEDHLDPKRPKVAEQEDLI 156
F+RD PF+ + +L +LR D D+ +Q ED + DL+
Sbjct: 165 FYRDQPHPFITSMVRALDEAMNKLRRANPDDPAYDENKRQFQED--------IKVMNDLV 216
Query: 157 DVLLVSNRRSWYYIKKLI--------------FPDENI---------AATDTIKVTLEWA 193
D ++ + S L+ DENI A + L +A
Sbjct: 217 DKIIADRKASGEQSDDLLTHMLNGKDPETGEPLDDENIRYQIITFLAAGHEATSGLLSFA 276
Query: 194 MTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPAAQFLPRET 253
+ L+KN ++K +E V+ D + +L+Y+ V+ E +R P A
Sbjct: 277 LYFLVKNPHELQKAAEEAARVLVDP-VPSYKQVKQLKYVGMVLNEALRLWPTAPAFSLYA 335
Query: 254 TERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-DKPDEFIPERFVGSNIDMGGQNFEFIP 311
E V+ G Y + + V + + RD +W D +EF PERF + F P
Sbjct: 336 KEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGDDVEEFRPERFENPS---AIPQHAFKP 392
Query: 312 FGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
FG G+R C G A+ L L +L FD+ E+D
Sbjct: 393 FGNGQRACIGQQFALHEATLVLGMMLKHFDFEDHTNYELD 432
>pdb|3LD6|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3LD6|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C Complex With Ketoconazole
pdb|3JUS|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUS|B Chain B, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(Cyp51) In Complex With Econazole
pdb|3JUV|A Chain A, Crystal Structure Of Human Lanosterol 14alpha-Demethylase
(C
Length = 461
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 4/165 (2%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDK-GFVDEDDLTRLEYLKAVVKE 238
+A T T W L ++ KK E + V + + D L L L +KE
Sbjct: 262 LAGQHTSSTTSAWMGFFLARDKTLQKKCYLEQKTVCGENLPPLTYDQLKDLNLLDRCIKE 321
Query: 239 TMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 298
T+R +P + R + GY IP V V+ R W + +F P+R++
Sbjct: 322 TLRLRPPIMIMMRMARTPQTVAGYTIPPGHQVCVSPTVNQRLKDSWVERLDFNPDRYLQD 381
Query: 299 NIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANL--LYKFD 341
N G+ F ++PFGAGR C G A ++ + + LY+FD
Sbjct: 382 N-PASGEKFAYVPFGAGRHRCIGENFAYVQIKTIWSTMLRLYEFD 425
>pdb|1EA1|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With Fluconazole
pdb|1E9X|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Complex With 4-
Phenylimidazole
pdb|1H5Z|A Chain A, Cytochrome P450 14 Alpha-Sterol Demethylase (Cyp51) From
Mycobacterium Tuberculosis In Ferric Low-Spin State
Length = 455
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A T T W + LM++ +A V E+ + D V L ++ L+ V+KET+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P L R + G+ I V + R + + P +F+P R+
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTM 344
+ + +IPFGAGR C G A+ ++ + LL ++++ M
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|2W0A|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor
N-[(1s)-2-Methyl-1-(Pyridin-4-Ylcarbamoyl)propyl]
Cyclohexanecarboxamide
Length = 455
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A T T W + LM++ +A V E+ + D V L ++ L+ V+KET+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P L R + G+ I V + R + + P +F+P R+
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTM 344
+ + +IPFGAGR C G A+ ++ + LL ++++ M
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1X8V|A Chain A, Estriol-Bound And Ligand-Free Structures Of Sterol
14alpha- Demethylase (Cyp51)
pdb|2BZ9|A Chain A, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2BZ9|B Chain B, Ligand-Free Structure Of Sterol 14alpha-Demethylase From
Mycobacterium Tuberculosis In P2(1) Space Group
pdb|2CI0|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2CIB|A Chain A, High Throughput Screening And X-Ray Crystallography
Assisted Evaluation Of Small Molecule Scaffolds For
Cyp51 Inhibitors
pdb|2VKU|A Chain A, 4,4'-Dihydroxybenzophenone Mimics Sterol Substrate In The
Binding Site Of Sterol 14alpha-Demethylase (Cyp51) In
The X-Ray Structure Of The Complex
pdb|2W09|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor Cis-4-
Methyl-N-[(1s)-3-(Methylsulfanyl)-1-(Pyridin-4-
Ylcarbamoyl)propyl]cyclohexanecarboxamide
pdb|2W0B|A Chain A, Cyp51 Of M. Tuberculosis Bound To An Inhibitor 3-{[(4-
Methylphenyl)sulfonyl]amino}propyl Pyridin-4-Ylcarbamate
Length = 455
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A T T W + LM++ +A V E+ + D V L ++ L+ V+KET+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P L R + G+ I V + R + + P +F+P R+
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTM 344
+ + +IPFGAGR C G A+ ++ + LL ++++ M
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|1U13|A Chain A, Crystal Structure Analysis Of The C37lC151TC442A-Triple
Mutant Of Cyp51 From Mycobacterium Tuberculosis
Length = 455
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/164 (25%), Positives = 72/164 (43%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETM 240
A T T W + LM++ +A V E+ + D V L ++ L+ V+KET+
Sbjct: 256 AGHHTSSGTASWTLIELMRHRDAYAAVIDELDELYGDGRSVSFHALRQIPQLENVLKETL 315
Query: 241 RFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNI 300
R P L R + G+ I V + R + + P +F+P R+
Sbjct: 316 RLHPPLIILMRVAKGEFEVQGHRIHEGDLVAASPAISNRIPEDFPDPHDFVPARYEQPRQ 375
Query: 301 DMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTM 344
+ + +IPFGAGR C G A+ ++ + LL ++++ M
Sbjct: 376 EDLLNRWTWIPFGAGRHRCVGAAFAIMQIKAIFSVLLREYEFEM 419
>pdb|4DUA|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
pdb|4DUA|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor, No Ligand
Length = 471
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 15/186 (8%)
Query: 177 DENI---------AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
DENI A + L +A+ L+KN ++K +E V+ D +
Sbjct: 251 DENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVK 309
Query: 228 RLEYLKAVVKETMRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-D 285
+L+Y+ V+ E +R P E V+ G Y + + V + + RD +W D
Sbjct: 310 QLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGD 369
Query: 286 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMP 345
+EF PERF + F PFG G+R C G A+ L L +L FD+
Sbjct: 370 DVEEFRPERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDH 426
Query: 346 RGMEID 351
E+D
Sbjct: 427 TNYELD 432
>pdb|4DUB|A Chain A, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
pdb|4DUB|B Chain B, Cytochrome P450 Bm3h-9d7 Mri Sensor Bound To Dopamine
Length = 472
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/186 (27%), Positives = 78/186 (41%), Gaps = 15/186 (8%)
Query: 177 DENI---------AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLT 227
DENI A + L +A+ L+KN ++K +E V+ D +
Sbjct: 252 DENIRYQIITFLAAGHEATSGLLSFALYFLVKNPHVLQKAAEEAARVLVDP-VPSYKQVK 310
Query: 228 RLEYLKAVVKETMRFQPAAQFLPRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVW-D 285
+L+Y+ V+ E +R P E V+ G Y + + V + + RD +W D
Sbjct: 311 QLKYVGMVLNEALRLWPTGPAFSLYAKEDTVLGGEYPLEKGDELMVLIPQLHRDKTIWGD 370
Query: 286 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMP 345
+EF PERF + F PFG G+R C G A+ L L +L FD+
Sbjct: 371 DVEEFRPERFENPS---AIPQHAFKPFGNGQRACIGQQFALHEATLVLGMMLKHFDFEDH 427
Query: 346 RGMEID 351
E+D
Sbjct: 428 TNYELD 433
>pdb|3NC3|A Chain A, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC3|B Chain B, Cyp134a1 Structure With A Closed Substrate Binding Loop
pdb|3NC5|A Chain A, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC5|B Chain B, Cyp134a1 Structure With An Open Substrate Binding Loop
pdb|3NC6|A Chain A, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC6|B Chain B, Cyp134a1 1-Phenylimidazole Bound Structure
pdb|3NC7|A Chain A, Cyp134a1 2-Phenylimidazole Bound Structure
pdb|3NC7|B Chain B, Cyp134a1 2-Phenylimidazole Bound Structure
Length = 441
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 84/197 (42%), Gaps = 24/197 (12%)
Query: 145 KRPKVAEQEDLIDVLLVSNRRSWYYIKKLIFP---DENIAATDTIKVTLEWAMTNLMKNA 201
K +V DLI +L S K I + +AAT+ TL + +L+ N
Sbjct: 230 KERRVNPGSDLISILCTSEYEGMALSDKDILALILNVLLAATEPADKTLALMIYHLLNNP 289
Query: 202 EAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPAAQFLPRETTERCVIDG 261
E M V + D+ V + ET+R++P Q +PR+ ++ V+ G
Sbjct: 290 EQMNDV-------LADRSLVPR-----------AIAETLRYKPPVQLIPRQLSQDTVVGG 331
Query: 262 YHIPAKTTVFVNVLAIGRDGQVWDKPDEF-IPERFVGSNIDMGGQNFEFIPFGAGRRICA 320
I T VF + A RD + +++PD F I +G G + FG+G C
Sbjct: 332 MEIKKDTIVFCMIGAANRDPEAFEQPDVFNIHREDLGIKSAFSGAA-RHLAFGSGIHNCV 390
Query: 321 GLPIAMPIVELALANLL 337
G A +E+ +AN++
Sbjct: 391 GTAFAKNEIEI-VANIV 406
>pdb|2JJN|A Chain A, Structure Of Closed Cytochrome P450 Eryk
pdb|2JJO|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With Its
Natural Substrate Erd
pdb|2JJP|A Chain A, Structure Of Cytochrome P450 Eryk In Complex With
Inhibitor Ketoconazole (Kc)
pdb|2XFH|A Chain A, Structure Of Cytochrome P450 Eryk Cocrystallized With
Inhibitor Clotrimazole
Length = 411
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
+ A+V+E +R++P + R TT+ + G IPA V VL+ RD D PD F
Sbjct: 274 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFD 333
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
P R G + FG G C G P+A +AL ++ +F
Sbjct: 334 PSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 374
>pdb|2VRV|A Chain A, Structure Of Histidine Tagged Cytochrome P450 Eryk In
Complex With Inhibitor Clotrimazole (Clt)
pdb|2WIO|A Chain A, Structure Of The Histidine Tagged, Open Cytochrome P450
Eryk From S. Erythraea
Length = 431
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/109 (31%), Positives = 50/109 (45%), Gaps = 8/109 (7%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
+ A+V+E +R++P + R TT+ + G IPA V VL+ RD D PD F
Sbjct: 294 IPAIVEEVLRYRPPFPQMQRTTTKATEVAGVPIPADVMVNTWVLSANRDSDAHDDPDRFD 353
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
P R G + FG G C G P+A +AL ++ +F
Sbjct: 354 PSRKSGGAAQLS--------FGHGVHFCLGAPLARLENRVALEEIIARF 394
>pdb|3R9C|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 With
Econazole Bound
pdb|3R9B|A Chain A, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|B Chain B, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
pdb|3R9B|C Chain C, Crystal Structure Of Mycobacterium Smegmatis Cyp164a2 In
Ligand Free State
Length = 418
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 42/165 (25%), Positives = 65/165 (39%), Gaps = 22/165 (13%)
Query: 177 DENIAATDTIKVTLEWAMTNLMKNAE-AMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
DE IA + + + NL+ NA AM + + + D AV
Sbjct: 244 DEIIATCNLLLIAGHETTVNLIANAALAMLRTPGQWAALAADGSRA-----------SAV 292
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
++ETMR+ P Q + R + I + +P T+ + + A RD + PD F P+R
Sbjct: 293 IEETMRYDPPVQLVSRYAGDDLTIGTHTVPKGDTMLLLLAAAHRDPTIVGAPDRFDPDR- 351
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ FG G C G P+A +AL L +F
Sbjct: 352 ---------AQIRHLGFGKGAHFCLGAPLARLEATVALPALAARF 387
>pdb|1IZO|A Chain A, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|B Chain B, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|1IZO|C Chain C, Cytochrome P450 Bs Beta Complexed With Fatty Acid
pdb|2ZQX|A Chain A, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|B Chain B, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQX|C Chain C, Cytochrome P450bsbeta Cocrystallized With Heptanoic Acid
pdb|2ZQJ|A Chain A, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|B Chain B, Substrate-Free Form Of Cytochrome P450bsbeta
pdb|2ZQJ|C Chain C, Substrate-Free Form Of Cytochrome P450bsbeta
Length = 417
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 8/114 (7%)
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
V+E R+ P FL + V + T+V +++ D ++WD PDEF PERF
Sbjct: 280 VQEVRRYYPFGPFLGALVKKDFVWNNCEFKKGTSVLLDLYGTNHDPRLWDHPDEFRPERF 339
Query: 296 VGSNIDMGGQNFEFIPFGAGR----RICAGLPIAMPIVELALANLLYKFDWTMP 345
++ F+ IP G G C G I + +++ +L L+++ ++ +P
Sbjct: 340 AEREENL----FDMIPQGGGHAEKGHRCPGEGITIEVMKASLDFLVHQIEYDVP 389
>pdb|3KHM|A Chain A, Crystal Structure Of Sterol 14alpha-Demethylase (Cyp51)
From Trypanosoma Cruzi In Complex With Inhibitor
Fluconazole
Length = 464
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 56/241 (23%), Positives = 100/241 (41%), Gaps = 18/241 (7%)
Query: 122 RLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLVS-----NRRSWYYIKKLIFP 176
R R ++ K+ ++I + K DL+ LL + R S + + +I
Sbjct: 205 RCREARAELQKILGEIIVAREKEEASKDNNTSDLLGGLLKAVYRDGTRMSLHEVCGMIV- 263
Query: 177 DENIAATDTIKVTLEWAMTNLM--KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKA 234
A T +T W+M +LM KN + + K+ KE+ + ++ + + + +
Sbjct: 264 AAMFAGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAER 321
Query: 235 VVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPER 294
V+E++R P + R + Y +P + + L D + + P + PER
Sbjct: 322 CVRESIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER 381
Query: 295 FVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLD 354
+D FI FGAG C G A+ V+ LA ++D+ + R E+ D D
Sbjct: 382 --DEKVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRD-EVPDPD 433
Query: 355 Y 355
Y
Sbjct: 434 Y 434
>pdb|2WUZ|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WUZ|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Cruzi In Complex
With Fluconazole In Alternative Conformation
pdb|2WX2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
pdb|2WX2|B Chain B, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Cruzi In Complex With Fluconazole
Length = 473
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 181 AATDTIKVTLEWAMTNLM--KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKE 238
A T +T W+M +LM KN + + K+ KE+ + ++ + + + + V+E
Sbjct: 277 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERCVRE 334
Query: 239 TMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 298
++R P + R + Y +P + + L D + + P + PER
Sbjct: 335 SIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DE 392
Query: 299 NIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+D FI FGAG C G A+ V+ LA ++D+ + R E+ D DY
Sbjct: 393 KVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRD-EVPDPDY 443
>pdb|3K1O|A Chain A, Crystal Structure Of Sterol 14-alpha Demethylase (cyp51)
From Trypanosoma Cruzi In Complex With A Potential
Antichagasic Drug, Posaconazole
pdb|3KSW|A Chain A, Crystal Structure Of Sterol 14alpha-demethylase (cyp51)
From Trypanosoma Cruzi In Complex With An Inhibitor Vnf
((4-(4-
Chlorophenyl)-n-[2-(1h-imidazol-1-yl)-1-
phenylethyl]benzamide)
Length = 458
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 44/177 (24%), Positives = 77/177 (43%), Gaps = 12/177 (6%)
Query: 181 AATDTIKVTLEWAMTNLM--KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKE 238
A T +T W+M +LM KN + + K+ KE+ + ++ + + + + V+E
Sbjct: 262 AGQHTSTITTSWSMLHLMHPKNKKWLDKLHKEIDEFPAQLNY--DNVMDEMPFAERCVRE 319
Query: 239 TMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 298
++R P + R + Y +P + + L D + + P + PER
Sbjct: 320 SIRRDPPLLMVMRMVKAEVKVGSYVVPKGDIIACSPLLSHHDEEAFPNPRLWDPER--DE 377
Query: 299 NIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+D FI FGAG C G A+ V+ LA ++D+ + R E+ D DY
Sbjct: 378 KVDGA-----FIGFGAGVHKCIGQKFALLQVKTILATAFREYDFQLLRD-EVPDPDY 428
>pdb|2WV2|A Chain A, X-Ray Structure Of Cyp51 From The Human Pathogen
Trypanosoma Brucei In Complex With Fluconazole
Length = 475
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 181 AATDTIKVTLEWAMTNLM-----KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
A T +T W+M +LM K+ EA++K +E + +DE + + +
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERC 331
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
+E++R P L R+ + Y +P + + L D + + +P + PER
Sbjct: 332 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 390
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+ + G FI FGAG C G + V+ LA +D+ + R E+ D DY
Sbjct: 391 ---DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDY 443
>pdb|3G1Q|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
pdb|3G1Q|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei In Ligand Free State
Length = 450
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 181 AATDTIKVTLEWAMTNLM-----KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
A T +T W+M +LM K+ EA++K +E + +DE + + +
Sbjct: 265 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERC 319
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
+E++R P L R+ + Y +P + + L D + + +P + PER
Sbjct: 320 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 378
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+ + G FI FGAG C G + V+ LA +D+ + R E+ D DY
Sbjct: 379 ---DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDY 431
>pdb|2X2N|A Chain A, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|B Chain B, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|C Chain C, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
pdb|2X2N|D Chain D, X-Ray Structure Of Cyp51 From Trypanosoma Brucei In
Complex With Posaconazole In Two Different Conformations
Length = 475
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 181 AATDTIKVTLEWAMTNLM-----KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
A T +T W+M +LM K+ EA++K +E + +DE + + +
Sbjct: 277 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERC 331
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
+E++R P L R+ + Y +P + + L D + + +P + PER
Sbjct: 332 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 390
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+ + G FI FGAG C G + V+ LA +D+ + R E+ D DY
Sbjct: 391 ---DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDY 443
>pdb|3GW9|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
pdb|3GW9|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Trypanosoma Brucei Bound To An Inhibitor N-(1-(2,4-
Dichlorophenyl)-2-(1h-Imidazol-1-Yl)ethyl)-4-(5-Phenyl-
1,3, 4-Oxaziazol-2-Yl)benzamide
Length = 450
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 181 AATDTIKVTLEWAMTNLM-----KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
A T +T W+M +LM K+ EA++K +E + +DE + + +
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERC 318
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
+E++R P L R+ + Y +P + + L D + + +P + PER
Sbjct: 319 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 377
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+ + G FI FGAG C G + V+ LA +D+ + R E+ D DY
Sbjct: 378 ---DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDY 430
>pdb|3P99|A Chain A, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|B Chain B, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|C Chain C, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
pdb|3P99|D Chain D, Sterol 14alpha-Demethylase (Cyp51) From Trypanosoma Brucei
In Complex With
Delta7-14alpha-Methylene-Cyclopropyl-Dihydrolanosterol
Length = 453
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 181 AATDTIKVTLEWAMTNLM-----KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
A T +T W+M +LM K+ EA++K +E + +DE + + +
Sbjct: 263 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERC 317
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
+E++R P L R+ + Y +P + + L D + + +P + PER
Sbjct: 318 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 376
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+ + G FI FGAG C G + V+ LA +D+ + R E+ D DY
Sbjct: 377 ---DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDY 429
>pdb|3TIK|A Chain A, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|B Chain B, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|C Chain C, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
pdb|3TIK|D Chain D, Sterol 14-Alpha Demethylase (Cyp51) From Trypanosoma
Brucei In Complex With The Tipifarnib Derivative
6-((4-Chlorophenyl)(Methoxy)(1-Methyl-
1h-Imidazol-5-Yl)methyl)-4-(2,
6-Difluorophenyl)-1-Methylquinolin- 2(1h)-One
Length = 454
Score = 49.7 bits (117), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 45/180 (25%), Positives = 77/180 (42%), Gaps = 18/180 (10%)
Query: 181 AATDTIKVTLEWAMTNLM-----KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAV 235
A T +T W+M +LM K+ EA++K +E + +DE + + +
Sbjct: 264 AGQHTSSITTTWSMLHLMHPANVKHLEALRKEIEEFPAQLNYNNVMDE-----MPFAERC 318
Query: 236 VKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERF 295
+E++R P L R+ + Y +P + + L D + + +P + PER
Sbjct: 319 ARESIRRDPPLLMLMRKVMADVKVGSYVVPKGDIIACSPLLSHHDEEAFPEPRRWDPER- 377
Query: 296 VGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEIDDLDY 355
+ + G FI FGAG C G + V+ LA +D+ + R E+ D DY
Sbjct: 378 ---DEKVEGA---FIGFGAGVHKCIGQKFGLLQVKTILATAFRSYDFQLLRD-EVPDPDY 430
>pdb|1UE8|A Chain A, Crystal Structure Of Thermophilic Cytochrome P450 From
Sulfolobus Tokodaii
pdb|3B4X|A Chain A, Crystal Structure Analysis Of Sulfolobus Tokodaii Strain7
Cytochrom P450
Length = 367
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/109 (32%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
LKAV +E +RF P R T E+ I I V V + + RD +V+ PD FI
Sbjct: 241 LKAV-EEALRFSPPVMRTIRVTKEKVKIRDQVIDEGELVRVWIASANRDEEVFKDPDSFI 299
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
P+R ++ FG+G +C G P+A +AL KF
Sbjct: 300 PDRTPNPHLS----------FGSGIHLCLGAPLARLEARIALEEFAKKF 338
>pdb|3L4D|A Chain A, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|B Chain B, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|C Chain C, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
pdb|3L4D|D Chain D, Crystal Structure Of Sterol 14-Alpha Demethylase (Cyp51)
From Leishmania Infantum In Complex With Fluconazole
Length = 453
Score = 48.5 bits (114), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 36/166 (21%), Positives = 73/166 (43%), Gaps = 10/166 (6%)
Query: 181 AATDTIKVTLEWAMTNLM--KNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKE 238
A T +T W++ +LM +N + K+ +E+ + ++ + + + + +E
Sbjct: 263 AGQHTSTITTTWSLLHLMDPRNKRHLAKLHQEIDEFPAQLNY--DNVMEEMPFAEQCARE 320
Query: 239 TMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 298
++R P L R+ + + Y +P + + L +D + + P E+ PER
Sbjct: 321 SIRRDPPLVMLMRKVLKPVQVGKYVVPEGDIIACSPLLSHQDEEAFPNPREWNPER---- 376
Query: 299 NIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTM 344
+M + F FGAG C G + V+ LA +L +D+ +
Sbjct: 377 --NMKLVDGAFCGFGAGVHKCIGEKFGLLQVKTVLATVLRDYDFEL 420
>pdb|3SN5|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3SN5|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
Cholest-4-En-3-One
pdb|3V8D|A Chain A, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
pdb|3V8D|B Chain B, Crystal Structure Of Human Cyp7a1 In Complex With
7-Ketocholesterol
Length = 491
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 86/188 (45%), Gaps = 22/188 (11%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKG----------FVDEDDLTRLE 230
+ +TI T W++ +++N EAMK +EV+ +++ G + + +L L
Sbjct: 269 SQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLP 327
Query: 231 YLKAVVKETMRFQPAAQFL--PRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVWDKP 287
L +++KE++R A+ + +E + DG Y+I + + + D +++ P
Sbjct: 328 VLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDP 387
Query: 288 DEFIPERFVGSN--------IDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYK 339
F +R++ N + + ++PFG+G IC G A+ ++ L +L
Sbjct: 388 LTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSY 447
Query: 340 FDWTMPRG 347
F+ + G
Sbjct: 448 FELELIEG 455
>pdb|3DAX|A Chain A, Crystal Structure Of Human Cyp7a1
pdb|3DAX|B Chain B, Crystal Structure Of Human Cyp7a1
Length = 491
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/188 (21%), Positives = 85/188 (45%), Gaps = 22/188 (11%)
Query: 181 AATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKG----------FVDEDDLTRLE 230
+ +TI T W++ +++N EAMK +EV+ +++ G + + +L L
Sbjct: 269 SQANTIPATF-WSLFQMIRNPEAMKAATEEVKRTLENAGQKVSLEGNPICLSQAELNDLP 327
Query: 231 YLKAVVKETMRFQPAAQFL--PRETTERCVIDG-YHIPAKTTVFVNVLAIGRDGQVWDKP 287
L +++KE++R A+ + +E + DG Y+I + + + D +++ P
Sbjct: 328 VLDSIIKESLRLSSASLNIRTAKEDFTLHLEDGSYNIRKDDIIALYPQLMHLDPEIYPDP 387
Query: 288 DEFIPERFVGSNIDMGGQ--------NFEFIPFGAGRRICAGLPIAMPIVELALANLLYK 339
F +R++ N + ++PFG+G IC G A+ ++ L +L
Sbjct: 388 LTFKYDRYLDENGKTKTTFYCNGLKLKYYYMPFGSGATICPGRLFAIHEIKQFLILMLSY 447
Query: 340 FDWTMPRG 347
F+ + G
Sbjct: 448 FELELIEG 455
>pdb|2RFB|A Chain A, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|B Chain B, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFB|C Chain C, Crystal Structure Of A Cytochrome P450 From The
Thermoacidophilic Archaeon Picrophilus Torridus
pdb|2RFC|A Chain A, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|B Chain B, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|C Chain C, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
pdb|2RFC|D Chain D, Ligand Bound (4-Phenylimidazole) Crystal Structure Of A
Cytochrome P450 From The Thermoacidophilic Archaeon
Picrophilus Torridus
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 57/236 (24%), Positives = 98/236 (41%), Gaps = 38/236 (16%)
Query: 106 LPFVGCWLDSLTGWNRRLRNNFSDCDKVYQQLIEDHLDPKRPKVAEQEDLIDVLLVSNRR 165
+P W D + G N+R N +++ +L+E ++ +I+VL S+ +
Sbjct: 118 MPLFKLWSDYIIG-NKRDENFNYVNNRMVSRLLEIF-------KSDSHGIINVLAGSSLK 169
Query: 166 SWYYIKKLIFPDENIAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDD 225
+ +KL DE I + + TNL+ N +R + ++ +D+
Sbjct: 170 N----RKLTM-DEKIKYIMLLIIGGNETTTNLIGNM---------IRVIDENPDIIDD-- 213
Query: 226 LTRLEYLKAVVKETMRFQPAAQFLP-RETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVW 284
L+ V+ET+R+ QFLP R E I+ I V V + + RD +
Sbjct: 214 --ALKNRSGFVEETLRYYSPIQFLPHRFAAEDSYINNKKIKKGDQVIVYLGSANRDETFF 271
Query: 285 DKPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
D+PD F G+ + FG G +C G P+A +AL ++L F
Sbjct: 272 DEPDLF-----------KIGRREMHLAFGIGIHMCLGAPLARLEASIALNDILNHF 316
>pdb|2RCM|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|2RCM|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a) At 1.73 A Resolution
pdb|3DSJ|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSJ|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 13(S)-Hod At 1.60 A
Resolution
pdb|3DSK|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
pdb|3DSK|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase Variant (F137l) (At-Aos(F137l), Cytochrome P450
74a, Cyp74a) Complexed With 12r,13s-Vernolic Acid At
1.55 A Resolution
Length = 495
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 202 EAMKKVQKEVRYVVKDKGF-VDEDDLTRLEYLKAVVKETMRFQPAAQFLPRETTERCVID 260
+ ++ +E+R V+K G + + ++E K+VV E +RF+P + VI+
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 261 ----GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG 297
+ + A ++ RD +++D+ DEF+PERFVG
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG 416
>pdb|2RCH|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCH|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hod At 1.85 A Resolution
pdb|2RCL|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|2RCL|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 12r,13s-Vernolic Acid At 2.4 A Resolution
pdb|3CLI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3CLI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) At 1.80 A
Resolution
pdb|3DSI|A Chain A, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
pdb|3DSI|B Chain B, Crystal Structure Of Arabidopsis Thaliana Allene Oxide
Synthase (Aos, Cytochrome P450 74a, Cyp74a) Complexed
With 13(S)-Hot At 1.60 A Resolution
Length = 495
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/101 (27%), Positives = 52/101 (51%), Gaps = 5/101 (4%)
Query: 202 EAMKKVQKEVRYVVKDKGF-VDEDDLTRLEYLKAVVKETMRFQPAAQFLPRETTERCVID 260
+ ++ +E+R V+K G + + ++E K+VV E +RF+P + VI+
Sbjct: 316 QVHNRLAEEIRSVIKSNGGELTMGAIEKMELTKSVVYECLRFEPPVTAQYGRAKKDLVIE 375
Query: 261 ----GYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVG 297
+ + A ++ RD +++D+ DEF+PERFVG
Sbjct: 376 SHDAAFKVKAGEMLYGYQPLATRDPKIFDRADEFVPERFVG 416
>pdb|3AWP|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant F288g
Length = 415
Score = 45.8 bits (107), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 230 EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 289
+Y + V+E RF P + ++ +G P V +++ D W P E
Sbjct: 272 DYAELFVQEVRRFYPFGPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 290 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGLPIAMPIVELALANLLYKFDWTMP 345
F PERF + D +F FIP G G C G I + I+++A L+ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|1IO8|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO8|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 231 YLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 290
YLKA+ +E +R+ P R+T ER + I V V + + RD +V+ ++F
Sbjct: 240 YLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 291 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEI 350
IP+R ++ FG+G +C G P+A +A+ +F R +EI
Sbjct: 299 IPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF-----RHIEI 343
Query: 351 DD 352
D
Sbjct: 344 LD 345
>pdb|1F4T|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4T|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
With 4- Phenylimidazole Bound
pdb|1F4U|A Chain A, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1F4U|B Chain B, Thermophilic P450: Cyp119 From Sulfolobus Solfactaricus
pdb|1IO9|A Chain A, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO9|B Chain B, Thermophilic Cytochrome P450 (cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|A Chain A, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
pdb|1IO7|B Chain B, Thermophilic Cytochrome P450 (Cyp119) From Sulfolobus
Solfataricus: High Resolution Structural Origin Of Its
Thermostability And Functional Properties
Length = 368
Score = 45.4 bits (106), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/122 (27%), Positives = 56/122 (45%), Gaps = 16/122 (13%)
Query: 231 YLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 290
YLKA+ +E +R+ P R+T ER + I V V + + RD +V+ ++F
Sbjct: 240 YLKAI-EEALRYSPPVMRTVRKTKERVKLGDQTIEEGEYVRVWIASANRDEEVFHDGEKF 298
Query: 291 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEI 350
IP+R ++ FG+G +C G P+A +A+ +F R +EI
Sbjct: 299 IPDRNPNPHLS----------FGSGIHLCLGAPLARLEARIAIEEFSKRF-----RHIEI 343
Query: 351 DD 352
D
Sbjct: 344 LD 345
>pdb|1PKF|A Chain A, Crystal Structure Of Epothilone D-Bound Cytochrome
P450epok
Length = 419
Score = 45.1 bits (105), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 52/208 (25%), Positives = 90/208 (43%), Gaps = 33/208 (15%)
Query: 137 LIEDHLDPKRPKVAEQEDLIDVLLVSNRRSWYYIKKLIFPDENI--AATDTIKVTLEWAM 194
L+ LD +R E + L +L S K+L+ I A TDT + +A+
Sbjct: 208 LLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAV 267
Query: 195 TNLMKNAEAMKKVQKEVRYVVKDKGFVDE--DDLTRLEYLKAVVKETMRFQPAAQFLPRE 252
NL+++ EA++ V+ E G + D++ R E + + T+RF R+
Sbjct: 268 LNLLRSPEALELVKAE-------PGLMRNALDEVLRFENILRI--GTVRFA-------RQ 311
Query: 253 TTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPF 312
E C G I VF+ + + RDG V+ +PD F R ++ + +
Sbjct: 312 DLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSAS----------LAY 358
Query: 313 GAGRRICAGLPIAMPIVELALANLLYKF 340
G G +C G+ +A E+A+ + +F
Sbjct: 359 GRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3VOO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant A245e
Length = 407
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 230 EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 289
+Y + V+E RF P + ++ +G P V +++ D W P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 290 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGLPIAMPIVELALANLLYKFDWTMP 345
F PERF + D +F FIP G G C G I + I+++A L+ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|3VM4|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) In Complex With
(R)-Ibuprophen
Length = 407
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 230 EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 289
+Y + V+E RF P + ++ +G P V +++ D W P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 290 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGLPIAMPIVELALANLLYKFDWTMP 345
F PERF + D +F FIP G G C G I + I+++A L+ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|3VNO|A Chain A, Cytochrome P450sp Alpha (cyp152b1) Mutant R241e
Length = 407
Score = 44.7 bits (104), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 230 EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 289
+Y + V+E RF P + ++ +G P V +++ D W P E
Sbjct: 264 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 323
Query: 290 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGLPIAMPIVELALANLLYKFDWTMP 345
F PERF + D +F FIP G G C G I + I+++A L+ + +P
Sbjct: 324 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 379
>pdb|3AWM|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Wild-Type With Palmitic
Acid
Length = 415
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 230 EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 289
+Y + V+E RF P + ++ +G P V +++ D W P E
Sbjct: 272 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 290 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGLPIAMPIVELALANLLYKFDWTMP 345
F PERF + D +F FIP G G C G I + I+++A L+ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|3AWQ|A Chain A, Cytochrome P450sp Alpha (Cyp152b1) Mutant L78f
Length = 415
Score = 44.7 bits (104), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 8/120 (6%)
Query: 230 EYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDE 289
+Y + V+E RF P + ++ +G P V +++ D W P E
Sbjct: 272 DYAELFVQEVRRFYPFFPAVVARASQDFEWEGMAFPEGRQVVLDLYGSNHDAATWADPQE 331
Query: 290 FIPERFVGSNIDMGGQNFEFIPFGAGRRI----CAGLPIAMPIVELALANLLYKFDWTMP 345
F PERF + D +F FIP G G C G I + I+++A L+ + +P
Sbjct: 332 FRPERFRAWDED----SFNFIPQGGGDHYLGHRCPGEWIVLAIMKVAAHLLVNAMRYDVP 387
>pdb|3MGX|A Chain A, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
pdb|3MGX|B Chain B, Crystal Structure Of P450 Oxyd That Is Involved In The
Biosynthesis Of Vancomycin-Type Antibiotics
Length = 415
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 50/113 (44%), Gaps = 13/113 (11%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
+ VV+E +R+ A + R TT I+G +P+ T V + A RD +D PD F+
Sbjct: 287 VDTVVEEVLRWTSPAMHVLRVTTADVTINGRDLPSGTPVVAWLPAANRDPAEFDDPDTFL 346
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA---MPIVELALANLLYKFD 341
P R + I FG G C G +A + +V LA + + D
Sbjct: 347 PGR----------KPNRHITFGHGMHHCLGSALARIELSVVLRVLAERVSRVD 389
>pdb|1Q5D|A Chain A, Epothilone B-Bound Cytochrome P450epok
pdb|1Q5E|A Chain A, Substrate-Free Cytochrome P450epok
Length = 419
Score = 44.3 bits (103), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 91/210 (43%), Gaps = 37/210 (17%)
Query: 137 LIEDHLDPKRPKVAEQEDLIDVLLVSNRRSWYYIKKLIFPDENI--AATDTIKVTLEWAM 194
L+ LD +R E + L +L S K+L+ I A TDT + +A+
Sbjct: 208 LLHGVLDERRRNPLENDVLTMLLQAEADGSRLSTKELVALVGAIIAAGTDTTIYLIAFAV 267
Query: 195 TNLMKNAEAMKKVQKEVRYVVKDKGFVDE----DDLTRLEYLKAVVKETMRFQPAAQFLP 250
NL+++ EA++ V+ E + + +DE D++ R+ T+RF
Sbjct: 268 LNLLRSPEALELVKAEPGLM---RNALDEVLRFDNILRI--------GTVRFA------- 309
Query: 251 RETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFI 310
R+ E C G I VF+ + + RDG V+ +PD F R ++ +
Sbjct: 310 RQDLEYC---GASIKKGEMVFLLIPSALRDGTVFSRPDVFDVRRDTSAS----------L 356
Query: 311 PFGAGRRICAGLPIAMPIVELALANLLYKF 340
+G G +C G+ +A E+A+ + +F
Sbjct: 357 AYGRGPHVCPGVSLARLEAEIAVGTIFRRF 386
>pdb|3EJB|B Chain B, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|D Chain D, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|F Chain F, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJB|H Chain H, Crystal Structure Of P450bioi In Complex With
Tetradecanoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|B Chain B, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|D Chain D, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|F Chain F, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJD|H Chain H, Crystal Structure Of P450bioi In Complex With Hexadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|B Chain B, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|D Chain D, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|F Chain F, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
pdb|3EJE|H Chain H, Crystal Structure Of P450bioi In Complex With Octadec-9z-
Enoic Acid Ligated Acyl Carrier Protein
Length = 404
Score = 42.7 bits (99), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 62/145 (42%), Gaps = 17/145 (11%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
+ V+E +R++ Q R +E I G I V++ + A RD ++ PD F
Sbjct: 267 IGTAVEECLRYESPTQMTARVASEDIDICGVTIRQGEQVYLLLGAANRDPSIFTNPDVF- 325
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
D+ + FG G +C G +A ++A+ LL + MP + +
Sbjct: 326 ---------DITRSPNPHLSFGHGHHVCLGSSLARLEAQIAINTLLQR----MP-SLNLA 371
Query: 352 DLDYDVRP--GFTQHKKNPLLLAAT 374
D ++ RP GF ++ P+ A+
Sbjct: 372 DFEWRYRPLFGFRALEELPVTFEAS 396
>pdb|1ODO|A Chain A, 1.85 A Structure Of Cyp154a1 From Streptomyces Coelicolor
A3(2)
Length = 408
Score = 42.0 bits (97), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 46/108 (42%), Gaps = 12/108 (11%)
Query: 235 VVKETMRFQPAAQFLPRE--TTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIP 292
VV+ET+R +PA + LP T+ + DG I + + A R + D F
Sbjct: 278 VVEETLRHEPAVKHLPLRYAVTDIALPDGRTIARGEPILASYAAANRHPDWHEDADTFDA 337
Query: 293 ERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
R V E + FG G C G P+A V LAL +L +F
Sbjct: 338 TRTVK----------EHLAFGHGVHFCLGAPLARMEVTLALESLFGRF 375
>pdb|3ABB|A Chain A, Crystal Structure Of Cyp105d6
Length = 408
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/109 (25%), Positives = 46/109 (42%), Gaps = 10/109 (9%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
+ VV+E +RF + + R E + G I A V V++ + RD + ++ PD F
Sbjct: 276 VSGVVEELLRFTSVSDHIVRMAKEDIEVGGATIKAGDAVLVSITLMNRDAKAYENPDIFD 335
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
R ++ FG G C G +A +E+AL L +
Sbjct: 336 ARRNARHHVG----------FGHGIHQCLGQNLARAELEIALGGLFARI 374
>pdb|1JIP|A Chain A, P450eryf(A245s)KETOCONAZOLE
Length = 403
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
L V+E +R+ + R E I G IP +TV V A RD + + PD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 327
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
P RF D+ + FG G C G P+A E+AL L +F + G++ D
Sbjct: 328 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 381
Query: 352 DL 353
D+
Sbjct: 382 DV 383
>pdb|1Z8Q|A Chain A, Ferrous Dioxygen Complex Of The A245t Cytochrome P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
L V+E +R+ + R E I G IP +TV V A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
P RF D+ + FG G C G P+A E+AL L +F + G++ D
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 382
Query: 352 DL 353
D+
Sbjct: 383 DV 384
>pdb|1Z8P|A Chain A, Ferrous Dioxygen Complex Of The A245s Cytochrome P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
L V+E +R+ + R E I G IP +TV V A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
P RF D+ + FG G C G P+A E+AL L +F + G++ D
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 382
Query: 352 DL 353
D+
Sbjct: 383 DV 384
>pdb|1Z8O|A Chain A, Ferrous Dioxygen Complex Of The Wild-Type Cytochrome
P450eryf
Length = 404
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
L V+E +R+ + R E I G IP +TV V A RD + + PD
Sbjct: 274 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 328
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
P RF D+ + FG G C G P+A E+AL L +F + G++ D
Sbjct: 329 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 382
Query: 352 DL 353
D+
Sbjct: 383 DV 384
>pdb|1JIO|A Chain A, P450eryf/6deb
Length = 403
Score = 40.4 bits (93), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 11/122 (9%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
L V+E +R+ + R E I G IP +TV V A RD + + PD
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRDPKQF--PD--- 327
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEID 351
P RF D+ + FG G C G P+A E+AL L +F + G++ D
Sbjct: 328 PHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDAD 381
Query: 352 DL 353
D+
Sbjct: 382 DV 383
>pdb|1EGY|A Chain A, Cytochrome P450eryf With 9-Aminophenanthrene Bound
pdb|1EUP|A Chain A, X-Ray Crystal Structure Of Cytochrome P450eryf With
Androstendione Bound
pdb|1JIN|A Chain A, P450eryfKETOCONAZOLE
pdb|1OXA|A Chain A, Cytochrome P450 (Donor:o2 Oxidoreductase)
Length = 403
Score = 40.0 bits (92), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 52/123 (42%), Gaps = 13/123 (10%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
L V+E +R+ + R E I G IP +TV V A RD P +F
Sbjct: 273 LPNAVEEILRYIAPPETTTRFAAEEVEIGGVAIPQYSTVLVANGAANRD------PSQFP 326
Query: 292 -PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPRGMEI 350
P RF D+ + FG G C G P+A E+AL L +F + G++
Sbjct: 327 DPHRF-----DVTRDTRGHLSFGQGIHFCMGRPLAKLEGEVALRALFGRFP-ALSLGIDA 380
Query: 351 DDL 353
DD+
Sbjct: 381 DDV 383
>pdb|1WIY|A Chain A, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
pdb|1WIY|B Chain B, Crystal Structure Analysis Of A 6-Coordinated Cytochorome
P450 From Thermus Thermophilus Hb8
Length = 389
Score = 39.3 bits (90), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/96 (29%), Positives = 44/96 (45%), Gaps = 8/96 (8%)
Query: 237 KETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV 296
+E +R P A L R ++ +P TT+ ++ R + + + F PERF+
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPQGTTLVLSPYVTQR--LYFPEGEAFQPERFL 316
Query: 297 GSNIDMGGQNFEFIPFGAGRRICAGLPIAM---PIV 329
G+ F PFG G+R+C G A+ PIV
Sbjct: 317 AERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIV 349
>pdb|1N97|A Chain A, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
pdb|1N97|B Chain B, Crystal Stucture Of Cyp175a1 From Thermus Thermophillus
Strain Hb27
Length = 389
Score = 38.9 bits (89), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 44/100 (44%), Gaps = 16/100 (16%)
Query: 237 KETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGR----DGQVWDKPDEFIP 292
+E +R P A L R ++ +P TT+ ++ R DG+ F P
Sbjct: 259 QEALRLYPPAWILTRRLERPLLLGEDRLPPGTTLVLSPYVTQRLHFPDGEA------FRP 312
Query: 293 ERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAM---PIV 329
ERF+ G+ F PFG G+R+C G A+ PIV
Sbjct: 313 ERFLEERGTPSGRYF---PFGLGQRLCLGRDFALLEGPIV 349
>pdb|1GWI|A Chain A, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
pdb|1GWI|B Chain B, The 1.92 A Structure Of Streptomyces Coelicolor A3(2)
Cyp154c1: A New Monooxygenase That Functionalizes
Macrolide Ring Systems
Length = 411
Score = 38.1 bits (87), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 11/110 (10%)
Query: 233 KAVVKETMRFQ-PAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWD-KPDEF 290
AVV+ET+RF P + L R E + IPA + V+ A+GRD + D F
Sbjct: 276 SAVVEETLRFSTPTSHVLIRFAAEDVPVGDRVIPAGDALIVSYGALGRDERAHGPTADRF 335
Query: 291 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
R G+ I FG G +C G ++ +AL L +F
Sbjct: 336 DLTRTSGNR---------HISFGHGPHVCPGAALSRMEAGVALPALYARF 376
>pdb|3B98|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B98|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1)
pdb|3B99|A Chain A, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
pdb|3B99|B Chain B, Crystal Structure Of Zebrafish Prostacyclin Synthase
(Cytochrome P450 8a1) In Complex With Substrate Analog
U51605
Length = 475
Score = 37.7 bits (86), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 37/164 (22%), Positives = 76/164 (46%), Gaps = 18/164 (10%)
Query: 192 WAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPAAQFLPR 251
W M L+ + EA++ V++E++ K E+ +V+ ET+R AA + R
Sbjct: 275 WVMGYLLTHPEALRAVREEIQ---GGKHLRLEERQKNTPVFDSVLWETLRLTAAA-LITR 330
Query: 252 ETTER---CVIDG--YHIPAKTTVFV-NVLAIGRDGQVWDKPDEFIPERFVGSN------ 299
+ T+ C+ +G YH+ + V ++ D Q+ +P+ F +RF+ ++
Sbjct: 331 DVTQDKKICLSNGQEYHLRRGDRLCVFPFISPQMDPQIHQQPEMFQFDRFLNADRTEKKD 390
Query: 300 -IDMGGQ-NFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
G + + +P+G +C G A+ ++ + +L +FD
Sbjct: 391 FFKNGARVKYPSVPWGTEDNLCPGRHFAVHAIKELVFTILTRFD 434
>pdb|1UED|A Chain A, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis.
pdb|1UED|B Chain B, Crystal Structure Of Oxyc A Cytochrome P450 Implicated In
An Oxidative C-C Coupling Reaction During Vancomycin
Biosynthesis
Length = 406
Score = 37.7 bits (86), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 45/112 (40%), Gaps = 11/112 (9%)
Query: 230 EYLKAVVKETMRF-QPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 288
E + VV E +R+ P PR + VIDG I A V ++L RD + PD
Sbjct: 276 EKAERVVNELVRYLSPVQAPNPRLAIKDVVIDGQLIKAGDYVLCSILMANRDEALTPDPD 335
Query: 289 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
R S++ FG G C G +A ++ +A L +F
Sbjct: 336 VLDANRAAVSDVG----------FGHGIHYCVGAALARSMLRMAYQTLWRRF 377
>pdb|2WHW|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WHW|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|A Chain A, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
pdb|2WI9|B Chain B, Selective Oxidation Of Carbolide C-H Bonds By Engineered
Macrolide P450 Monooxygenase
Length = 436
Score = 36.6 bits (83), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 229 LEYLKAVVKETMRFQ-PAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ L V+E +R++ P R E +DG IPA TV V VLA P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV-VLA-----DAHRTP 346
Query: 288 DEFI-PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPR 346
+ F P RF D+ + FG G C G P+A +A+ LL +
Sbjct: 347 ERFPDPHRF-----DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER------- 394
Query: 347 GMEIDDLDYDVRPGFTQHKKNPLL 370
DL DV PG NP++
Sbjct: 395 ---CPDLALDVSPGELVWYPNPMI 415
>pdb|2VZ7|A Chain A, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZ7|B Chain B, Crystal Structure Of The Yc-17-Bound Pikc D50n Mutant
pdb|2VZM|A Chain A, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
pdb|2VZM|B Chain B, Crystal Structure Of The Narbomycin-Bound Pikc D50n Mutant
Length = 436
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 229 LEYLKAVVKETMRFQ-PAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ L V+E +R++ P R E +DG IPA TV V VLA P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV-VLA-----DAHRTP 346
Query: 288 DEFI-PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPR 346
+ F P RF D+ + FG G C G P+A +A+ LL +
Sbjct: 347 ERFPDPHRF-----DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER------- 394
Query: 347 GMEIDDLDYDVRPGFTQHKKNPLL 370
DL DV PG NP++
Sbjct: 395 ---CPDLALDVSPGELVWYPNPMI 415
>pdb|2BVJ|A Chain A, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2BVJ|B Chain B, Ligand-Free Structure Of Cytochrome P450 Pikc (Cyp107l1)
pdb|2C6H|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C6H|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2C7X|A Chain A, Crystal Structure Of Narbomycin-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CA0|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|A Chain A, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
pdb|2CD8|B Chain B, Crystal Structure Of Yc-17-Bound Cytochrome P450 Pikc
(Cyp107l1)
Length = 436
Score = 36.6 bits (83), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 57/144 (39%), Gaps = 23/144 (15%)
Query: 229 LEYLKAVVKETMRFQ-PAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
+ L V+E +R++ P R E +DG IPA TV V VLA P
Sbjct: 293 MTLLDGAVEEMLRYEGPVESATYRFPVEPVDLDGTVIPAGDTVLV-VLA-----DAHRTP 346
Query: 288 DEFI-PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFDWTMPR 346
+ F P RF D+ + FG G C G P+A +A+ LL +
Sbjct: 347 ERFPDPHRF-----DIRRDTAGHLAFGHGIHFCIGAPLARLEARIAVRALLER------- 394
Query: 347 GMEIDDLDYDVRPGFTQHKKNPLL 370
DL DV PG NP++
Sbjct: 395 ---CPDLALDVSPGELVWYPNPMI 415
>pdb|3DAM|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DAN|A Chain A, Crystal Structure Of Allene Oxide Synthase
pdb|3DBM|A Chain A, Crystal Structure Of Allene Oxide Synthase
Length = 473
Score = 36.6 bits (83), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 29/132 (21%), Positives = 60/132 (45%), Gaps = 20/132 (15%)
Query: 172 KLIFPDENIAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKD--KGFVDEDDLTRL 229
K++FP+ TL+W + ++ +E+R +K G V + + ++
Sbjct: 282 KILFPN-----------TLKWIG---LAGENLHTQLAEEIRGAIKSYGDGNVTLEAIEQM 327
Query: 230 EYLKAVVKETMRFQPAAQFLPRETTERCVIDG----YHIPAKTTVFVNVLAIGRDGQVWD 285
K+VV E++R +P + I+ + + +F +D +V+D
Sbjct: 328 PLTKSVVYESLRIEPPVPPQYGKAKSNFTIESHDATFEVKKGEMLFGYQPFATKDPKVFD 387
Query: 286 KPDEFIPERFVG 297
+P+E++P+RFVG
Sbjct: 388 RPEEYVPDRFVG 399
>pdb|4EP6|A Chain A, Crystal Structure Of The Xpla Heme Domain In Complex With
Imidazole And Peg
Length = 392
Score = 35.8 bits (81), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 234 AVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 293
A++ E +R P R TE I G I A + + + A RD +V+D PD F
Sbjct: 266 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 325
Query: 294 RFVGSNIDMGGQNFEFIPFGAGRRICAG 321
R ++ ++ FG G CAG
Sbjct: 326 RPPAASRNLS--------FGLGPHSCAG 345
>pdb|2FR7|A Chain A, Crystal Structure Of Cytochrome P450 Cyp199a2
pdb|4DNJ|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a2
Length = 412
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 28/103 (27%), Positives = 44/103 (42%), Gaps = 10/103 (9%)
Query: 237 KETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV 296
+E +RF+ Q R TT + G I V + + + RD + WD PD +
Sbjct: 289 EEAVRFESPVQTFFRTTTRDVELAGATIGEGEKVLMFLGSANRDPRRWDDPDRY------ 342
Query: 297 GSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYK 339
D+ + + FG+G +C G +A E+ LA L K
Sbjct: 343 ----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVVLAALARK 381
>pdb|2WIV|A Chain A, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIV|B Chain B, Cytochrome-P450 Xpla Heme Domain P21
pdb|2WIY|A Chain A, Cytochrome P450 Xpla Heme Domain P21212
Length = 394
Score = 35.8 bits (81), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 38/88 (43%), Gaps = 8/88 (9%)
Query: 234 AVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 293
A++ E +R P R TE I G I A + + + A RD +V+D PD F
Sbjct: 268 AIINEMVRMDPPQLSFLRFPTEDVEIGGVLIEAGSPIRFMIGAANRDPEVFDDPDVFDHT 327
Query: 294 RFVGSNIDMGGQNFEFIPFGAGRRICAG 321
R ++ ++ FG G CAG
Sbjct: 328 RPPAASRNLS--------FGLGPHSCAG 347
>pdb|3A4G|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Trigonal Crystal Form)
pdb|3A4H|A Chain A, Structure Of Cytochrome P450 Vdh From Pseudonocardia
Autotrophica (Orthorhombic Crystal Form)
Length = 411
Score = 34.7 bits (78), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 11/95 (11%)
Query: 232 LKAVVKETMRF-QPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 290
+ + V+E +RF P +Q R T E G IPA V + + A RD +PD
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 291 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA 325
R D G F FG G C G +A
Sbjct: 329 DITR------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|4AW3|A Chain A, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
pdb|4AW3|B Chain B, Structure Of The Mixed-Function P450 Mycg F286v Mutant In
Complex With Mycinamicin V In P1 Space Group
Length = 417
Score = 34.7 bits (78), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 61/153 (39%), Gaps = 12/153 (7%)
Query: 190 LEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQP--AAQ 247
L+ A+ L+ E+ + Y++ + + L R E + + V+E R+ P
Sbjct: 245 LDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGT 304
Query: 248 FLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNF 307
+PR E + G I A V + A RD + D ID+
Sbjct: 305 AVPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD----------RIDVDRTPN 354
Query: 308 EFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ + FG G C G P+A +++AL LL +
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|3A4Z|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A4Z|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution
pdb|3A50|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A50|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound Vitamin D3
pdb|3A51|A Chain A, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|B Chain B, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|C Chain C, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|D Chain D, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
pdb|3A51|E Chain E, Structure Of Cytochrome P450 Vdh Mutant (Vdh-K1) Obtained
By Directed Evolution With Bound 25-Hydroxyvitamin D3
Length = 411
Score = 34.7 bits (78), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 38/95 (40%), Gaps = 11/95 (11%)
Query: 232 LKAVVKETMRF-QPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEF 290
+ + V+E +RF P +Q R T E G IPA V + + A RD +PD
Sbjct: 269 ISSAVEEFLRFDSPVSQAPIRFTAEDVTYSGVTIPAGEMVMLGLAAANRDADWMPEPDRL 328
Query: 291 IPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIA 325
R D G F FG G C G +A
Sbjct: 329 DITR------DASGGVF----FGHGIHFCLGAQLA 353
>pdb|2Y46|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y46|C Chain C, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In C 2 2 21 Space Group
pdb|2Y5N|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5N|B Chain B, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin V In P21 Space Group
pdb|2Y5Z|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|B Chain B, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y5Z|C Chain C, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In C2221 Space Group
pdb|2Y98|A Chain A, Structure Of The Mixed-Function P450 Mycg In Complex With
Mycinamicin Iv In P21212 Space Group
pdb|2YGX|A Chain A, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|B Chain B, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|C Chain C, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YGX|D Chain D, Structure Of The Mixed-Function P450 Mycg In P21 Space
Group
pdb|2YCA|A Chain A, Mixed-Function P450 Mycg In Complex With Mycinamicin Iii
In P21212 Space Group
Length = 417
Score = 34.3 bits (77), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 12/153 (7%)
Query: 190 LEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQP--AAQ 247
L+ A+ L+ E+ + Y++ + + L R E + + V+E R+ P
Sbjct: 245 LDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGT 304
Query: 248 FLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNF 307
PR E + G I A V + A RD + D ID+
Sbjct: 305 AFPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD----------RIDVDRTPN 354
Query: 308 EFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ + FG G C G P+A +++AL LL +
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|3ZSN|A Chain A, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|B Chain B, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
pdb|3ZSN|C Chain C, Structure Of The Mixed-Function P450 Mycg F286a Mutant In
Complex With Mycinamicin Iv
Length = 417
Score = 33.9 bits (76), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 36/153 (23%), Positives = 60/153 (39%), Gaps = 12/153 (7%)
Query: 190 LEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQP--AAQ 247
L+ A+ L+ E+ + Y++ + + L R E + + V+E R+ P
Sbjct: 245 LDLAIGLLVAGYESTTTQIADFVYLLMTRPELRRQLLDRPELIPSAVEELTRWVPLGVGT 304
Query: 248 FLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNF 307
PR E + G I A V + A RD + D ID+
Sbjct: 305 AAPRYAVEDVTLRGVTIRAGEPVLASTGAANRDQAQFPDAD----------RIDVDRTPN 354
Query: 308 EFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ + FG G C G P+A +++AL LL +
Sbjct: 355 QHLGFGHGVHHCLGAPLARVELQVALEVLLQRL 387
>pdb|3TKT|A Chain A, Crystal Structure Of Cyp108d1 From Novosphingobium
Aromaticivorans Dsm12444
Length = 450
Score = 33.9 bits (76), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 28/110 (25%), Positives = 45/110 (40%), Gaps = 10/110 (9%)
Query: 232 LKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFI 291
L +V+E +R+ Q R + G I A + +N +A D + +P +F
Sbjct: 322 LPGIVEEAIRWTTPVQHFMRTAATDTELCGQKIAAGDWLMLNYVAANHDPAQFPEPRKFD 381
Query: 292 PERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
P R ++ FGAG C GL +A + + L LL + D
Sbjct: 382 PTRPANRHLA----------FGAGSHQCLGLHLARLEMRVLLDVLLDRVD 421
>pdb|3BUJ|A Chain A, Crystal Structure Of Calo2
Length = 397
Score = 33.5 bits (75), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 40/94 (42%), Gaps = 10/94 (10%)
Query: 228 RLEYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKP 287
R + L V+E +R+ P+ Q R+ + G + V V A RD + +D+P
Sbjct: 262 RPDLLAQAVEECLRYDPSVQSNTRQLDVDVELRGRRLRRDDVVVVLAGAANRDPRRYDRP 321
Query: 288 DEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAG 321
D+F ER + FGAG R C G
Sbjct: 322 DDFDIER----------DPVPSMSFGAGMRYCLG 345
>pdb|2Z3T|A Chain A, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|B Chain B, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|C Chain C, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3T|D Chain D, Crystal Structure Of Substrate Free Cytochrome P450 Stap
(cyp245a1)
pdb|2Z3U|A Chain A, Crystal Structure Of Chromopyrrolic Acid Bound Cytochrome
P450 Stap (Cyp245a1)
pdb|3A1L|A Chain A, Crystal Structure Of 11,11'-Dichlorochromopyrrolic Acid
Bound Cytochrome P450 Stap (Cyp245a1)
Length = 425
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/115 (27%), Positives = 43/115 (37%), Gaps = 18/115 (15%)
Query: 227 TRLEYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDK 286
T E A V+E MR+ P Q + R E + + IP + V + + RD +
Sbjct: 282 TTPESTPAAVEELMRYDPPVQAVTRWAYEDIRLGDHDIPRGSRVVALLGSANRDPARFPD 341
Query: 287 PDEF----IPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLL 337
PD ER VG FG G C G +A E+ L LL
Sbjct: 342 PDVLDVHRAAERQVG--------------FGLGIHYCLGATLARAEAEIGLRALL 382
>pdb|3TYW|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|C Chain C, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|3TYW|D Chain D, Crystal Structure Of Cyp105n1 From Streptomyces Coelicolor
A3(2)
pdb|4FXB|A Chain A, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
pdb|4FXB|B Chain B, Crystal Structure Of Cyp105n1 From Streptomyces
Coelicolor: A Cytochrome P450 Oxidase In The Coelibactin
Siderophore Biosynthetic Pathway
Length = 417
Score = 32.7 bits (73), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 44/111 (39%), Gaps = 11/111 (9%)
Query: 230 EYLKAVVKETMRFQPAAQFLP-RETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPD 288
+ + A V E +R A +P R E + G +PA V + D + +D P+
Sbjct: 280 DLMPAAVDELLRVLSVADSIPLRVAAEDIELSGRTVPADDGVIALLAGANHDPEQFDDPE 339
Query: 289 EFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYK 339
+D + + FG G C G +A +E+AL LL +
Sbjct: 340 ----------RVDFHRTDNHHVAFGYGVHQCVGQHLARLELEVALETLLRR 380
>pdb|2OJL|A Chain A, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68.
pdb|2OJL|B Chain B, Crystal Structure Of Q7waf1_borpa From Bordetella
Parapertussis. Northeast Structural Genomics Target
Bpr68
Length = 108
Score = 32.3 bits (72), Expect = 0.49, Method: Composition-based stats.
Identities = 13/29 (44%), Positives = 18/29 (62%), Gaps = 1/29 (3%)
Query: 119 WNRRLRNNFSDCDKVYQQLIEDHLDPKRP 147
W+R + F + KV +Q + DHLDP RP
Sbjct: 63 WDREVDGGFPEA-KVLKQRVRDHLDPGRP 90
>pdb|2DKK|A Chain A, Structure/function Studies Of Cytochrome P450 158a1 From
Streptomyces Coelicolor A3(2)
Length = 411
Score = 32.3 bits (72), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 249 LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 308
L R E + G I A V+V+ LA RD V+ PD ID+
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNP 345
Query: 309 FIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ +G G C G +A EL + LL +
Sbjct: 346 HLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|3P3O|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Ntermii) From Streptomyces Thioluteus
pdb|3P3X|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3X|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Nterm- Aurh-I) From Streptomyces Thioluteus
pdb|3P3Z|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh From Streptomyces Thioluteus In Complex With
Ancymidol
Length = 416
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 230 EYLKAVVKETMRFQPAAQFLP----RETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 285
E V+E +R+ P LP R E ++G IP T VF+ RD +V+
Sbjct: 284 ELAPQAVEEVLRWSPT---LPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFA 340
Query: 286 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
D F +I + + I FG G C G +A + A+A L + D
Sbjct: 341 DADRF--------DITV-KREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 387
>pdb|2NZ5|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZ5|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|A Chain A, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
pdb|2NZA|B Chain B, Structure And Function Studies Of Cytochrome P450 158a1
From Streptomyces Coelicolor A3(2)
Length = 413
Score = 32.0 bits (71), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 36/92 (39%), Gaps = 10/92 (10%)
Query: 249 LPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFE 308
L R E + G I A V+V+ LA RD V+ PD ID+
Sbjct: 296 LARIALEDVEVHGTRIAAGEPVYVSYLAANRDPDVFPDPD----------RIDLDRDPNP 345
Query: 309 FIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ +G G C G +A EL + LL +
Sbjct: 346 HLAYGNGHHFCTGAVLARMQTELLVDTLLERL 377
>pdb|4DNZ|A Chain A, The Crystal Structures Of Cyp199a4
pdb|4DNZ|B Chain B, The Crystal Structures Of Cyp199a4
pdb|4DNZ|C Chain C, The Crystal Structures Of Cyp199a4
pdb|4DNZ|D Chain D, The Crystal Structures Of Cyp199a4
pdb|4DO1|A Chain A, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|B Chain B, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|C Chain C, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4DO1|D Chain D, The Crystal Structures Of 4-Methoxybenzoate Bound Cyp199a4
pdb|4EGM|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGM|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
4-ethylbenzoic Acid
pdb|4EGN|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGN|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Veratric Acid
pdb|4EGO|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|C Chain C, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGO|D Chain D, The X-ray Crystal Structure Of Cyp199a4 In Complex With
Indole-6- Carboxylic Acid
pdb|4EGP|A Chain A, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
pdb|4EGP|B Chain B, The X-ray Crystal Structure Of Cyp199a4 In Complex With
2-naphthoic Acid
Length = 410
Score = 32.0 bits (71), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/103 (25%), Positives = 43/103 (41%), Gaps = 10/103 (9%)
Query: 237 KETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFV 296
+E +RF+ Q R TT + G I V + + + RD + W PD +
Sbjct: 287 EEAVRFESPVQTFFRTTTREVELGGAVIGEGEKVLMFLGSANRDPRRWSDPDLY------ 340
Query: 297 GSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYK 339
D+ + + FG+G +C G +A E+ L+ L K
Sbjct: 341 ----DITRKTSGHVGFGSGVHMCVGQLVARLEGEVMLSALARK 379
>pdb|3B6H|A Chain A, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
pdb|3B6H|B Chain B, Crystal Structure Of Human Prostacyclin Synthase In
Complex With Inhibitor Minoxidil
Length = 498
Score = 32.0 bits (71), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 28/154 (18%)
Query: 192 WAMTNLMKNAEAMKKVQKEVRYV-------VKDKGFVDEDDLTRLEYLKAVVKETMRFQP 244
W + L+KN EA+ V+ E+ + V + + L L +V+ E++R
Sbjct: 284 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT- 342
Query: 245 AAQFLPRETTERCVI---DGYHIPAK---TTVFVNVLAIGRDGQVWDKPDEFIPERFVGS 298
AA F+ RE + DG + + L+ RD +++ P+ F RF+
Sbjct: 343 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 402
Query: 299 NIDMGGQNFEF-----------IPFGAGRRICAG 321
+ G + +F +P+GAG C G
Sbjct: 403 D---GSEKKDFYKDGKRLKNYNMPWGAGHNHCLG 433
>pdb|3P3L|A Chain A, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
pdb|3P3L|B Chain B, Crystal Structure Of The Cytochrome P450 Monooxygenase
Aurh (Wildtype) From Streptomyces Thioluteus
Length = 406
Score = 32.0 bits (71), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 32/116 (27%), Positives = 47/116 (40%), Gaps = 16/116 (13%)
Query: 230 EYLKAVVKETMRFQPAAQFLP----RETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWD 285
E V+E +R+ P LP R E ++G IP T VF+ RD +V+
Sbjct: 274 ELAPQAVEEVLRWSPT---LPVTATRVAAEDFEVNGVRIPTGTPVFMCAHVAHRDPRVFA 330
Query: 286 KPDEFIPERFVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKFD 341
D F +I + + I FG G C G +A + A+A L + D
Sbjct: 331 DADRF--------DITV-KREAPSIAFGGGPHFCLGTALARLELTEAVAALATRLD 377
>pdb|2IAG|A Chain A, Crystal Structure Of Human Prostacyclin Synthase
pdb|2IAG|B Chain B, Crystal Structure Of Human Prostacyclin Synthase
Length = 482
Score = 32.0 bits (71), Expect = 0.65, Method: Compositional matrix adjust.
Identities = 36/154 (23%), Positives = 63/154 (40%), Gaps = 28/154 (18%)
Query: 192 WAMTNLMKNAEAMKKVQKEVRYV-------VKDKGFVDEDDLTRLEYLKAVVKETMRFQP 244
W + L+KN EA+ V+ E+ + V + + L L +V+ E++R
Sbjct: 272 WLLLFLLKNPEALAAVRGELESILWQAEQPVSQTTTLPQKVLDSTPVLDSVLSESLRLT- 330
Query: 245 AAQFLPRETTERCVI---DGYHIPAKTT---VFVNVLAIGRDGQVWDKPDEFIPERFVGS 298
AA F+ RE + DG + + L+ RD +++ P+ F RF+
Sbjct: 331 AAPFITREVVVDLAMPMADGREFNLRRGDRLLLFPFLSPQRDPEIYTDPEVFKYNRFLNP 390
Query: 299 NIDMGGQNFEF-----------IPFGAGRRICAG 321
+ G + +F +P+GAG C G
Sbjct: 391 D---GSEKKDFYKDGKRLKNYNMPWGAGHNHCLG 421
>pdb|1SE6|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
pdb|1SE6|B Chain B, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.6 bits (70), Expect = 0.81, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 197 LMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPA--AQFLPRETT 254
L EA+ ++ +++ + + E + E + E +R+ P A L R
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIAL 298
Query: 255 ERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGA 314
E I G I A V+V+ LA RD +V+ PD ER ++ FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS----------FGF 348
Query: 315 GRRICAG 321
G C G
Sbjct: 349 GPHYCPG 355
>pdb|3TNK|A Chain A, Crystal Structure Of Mutant I87r In Cyp158a2
pdb|3TNK|B Chain B, Crystal Structure Of Mutant I87r In Cyp158a2
Length = 407
Score = 31.6 bits (70), Expect = 0.82, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 49/127 (38%), Gaps = 12/127 (9%)
Query: 197 LMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPA--AQFLPRETT 254
L EA+ ++ +++ + + E + E + E +R+ P A L R
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIAL 298
Query: 255 ERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGA 314
E I G I A V+V+ LA RD +V+ PD ID + FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----------RIDFERSPNPHVSFGF 348
Query: 315 GRRICAG 321
G C G
Sbjct: 349 GPHYCPG 355
>pdb|2D0E|A Chain A, Substrate Assited In Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.6 bits (70), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 32/127 (25%), Positives = 50/127 (39%), Gaps = 12/127 (9%)
Query: 197 LMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKETMRFQPA--AQFLPRETT 254
L EA+ ++ +++ + + E + E + E +R+ P A L R
Sbjct: 239 LQIGGEAVTNNSGQMFHLLLSRPELAERLRSEPEIRPRAIDELLRWIPHRNAVGLSRIAL 298
Query: 255 ERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSNIDMGGQNFEFIPFGA 314
E I G I A V+V+ LA RD +V+ PD ER ++ FG
Sbjct: 299 EDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPDRIDFERSPNPHVS----------FGF 348
Query: 315 GRRICAG 321
G C G
Sbjct: 349 GPHYCPG 355
>pdb|1S1F|A Chain A, Crystal Structure Of Streptomyces Coelicolor A3(2)
Cyp158a2 From Antibiotic Biosynthetic Pathways
Length = 406
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 236 VKETMRFQPA--AQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 293
+ E +R+ P A L R E I G I A V+V+ LA RD +V+ PD
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 294 RFVGSNIDMGGQNFEFIPFGAGRRICAG 321
ID + FG G C G
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPG 355
>pdb|3TZO|A Chain A, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
pdb|3TZO|B Chain B, The Role Of I87 Of Cyp158a2 In Oxidative Coupling Reaction
Length = 410
Score = 31.6 bits (70), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 236 VKETMRFQPA--AQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 293
+ E +R+ P A L R E I G I A V+V+ LA RD +V+ PD
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 294 RFVGSNIDMGGQNFEFIPFGAGRRICAG 321
ID + FG G C G
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPG 355
>pdb|1T93|A Chain A, Evidence For Multiple Substrate Recognition And Molecular
Mechanism Of C-C Reaction By Cytochrome P450 Cyp158a2
From Streptomyces Coelicolor A3(2)
Length = 406
Score = 31.2 bits (69), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 236 VKETMRFQPA--AQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 293
+ E +R+ P A L R E I G I A V+V+ LA RD +V+ PD
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 294 RFVGSNIDMGGQNFEFIPFGAGRRICAG 321
ID + FG G C G
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPG 355
>pdb|2D09|A Chain A, A Role For Active Site Water Molecules And Hydroxyl Groups
Of Substrate For Oxygen Activation In Cytochrome P450
158a2
Length = 407
Score = 31.2 bits (69), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 35/88 (39%), Gaps = 12/88 (13%)
Query: 236 VKETMRFQPA--AQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPE 293
+ E +R+ P A L R E I G I A V+V+ LA RD +V+ PD
Sbjct: 278 IDELLRWIPHRNAVGLSRIALEDVEIKGVRIRAGDAVYVSYLAANRDPEVFPDPD----- 332
Query: 294 RFVGSNIDMGGQNFEFIPFGAGRRICAG 321
ID + FG G C G
Sbjct: 333 -----RIDFERSPNPHVSFGFGPHYCPG 355
>pdb|3RWL|A Chain A, Structure Of P450pyr Hydroxylase
Length = 426
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 32/161 (19%), Positives = 60/161 (37%), Gaps = 27/161 (16%)
Query: 180 IAATDTIKVTLEWAMTNLMKNAEAMKKVQKEVRYVVKDKGFVDEDDLTRLEYLKAVVKET 239
+ DT + ++ + L KN + K++ V + +V E
Sbjct: 264 VGGNDTTRNSMTGGVLALHKNPDQFAKLKANPALV------------------ETMVPEI 305
Query: 240 MRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPERFVGSN 299
+R+Q + R + G I V + + RD +V D+P+EFI +R
Sbjct: 306 IRWQTPLAHMRRTAIADSELGGKTIRKGDKVVMWYYSGNRDDEVIDRPEEFIIDR----- 360
Query: 300 IDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
+ + + FG G C G +A + + +L +F
Sbjct: 361 ----PRPRQHLSFGFGIHRCVGNRLAEMQLRILWEEILTRF 397
>pdb|3CTZ|A Chain A, Structure Of Human Cytosolic X-Prolyl Aminopeptidase
Length = 623
Score = 30.4 bits (67), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 26/85 (30%), Positives = 42/85 (49%), Gaps = 9/85 (10%)
Query: 1 KKFVTHMLSANRTEQFRQVQTDEIFRMIEKISKLSAAPAAADNDYVSSEAPINLSEMAMT 60
K VT + +A++ E+FR+ Q D + IS S P A Y AP+ E T
Sbjct: 354 KGGVTEISAADKAEEFRRQQADFVDLSFPTIS--STGPTGAIIHY----APV--PETNRT 405
Query: 61 LIRNIIFRVGFGKRFEDEGTATVSR 85
L + ++ + G +++D GT V+R
Sbjct: 406 LSLDEVYLIDSGAQYKD-GTTDVTR 429
>pdb|1ZAK|A Chain A, Adenylate Kinase From Maize In Complex With The Inhibitor
P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
pdb|1ZAK|B Chain B, Adenylate Kinase From Maize In Complex With The Inhibitor
P1,P5-Bis(Adenosine-5'-)pentaphosphate (Ap5a)
Length = 222
Score = 30.0 bits (66), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 27/85 (31%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 218 KGFVDEDDLTRLEYLKAVVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAI 277
K F+++ L E + +VKE +R QP AQ ++DGY + + L I
Sbjct: 55 KEFMEKGQLVPDEIVVNMVKERLR-QPDAQ------ENGWLLDGYPRSYSQAMALETLEI 107
Query: 278 GRDGQVW-DKPDEFIPERFVGSNID 301
D + D PDE + ER VG +D
Sbjct: 108 RPDTFILLDVPDELLVERVVGRRLD 132
>pdb|1CPT|A Chain A, Crystal Structure And Refinement Of Cytochrome P450-Terp
At 2.3 Angstroms Resolution
Length = 428
Score = 29.6 bits (65), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/106 (24%), Positives = 44/106 (41%), Gaps = 10/106 (9%)
Query: 235 VVKETMRFQPAAQFLPRETTERCVIDGYHIPAKTTVFVNVLAIGRDGQVWDKPDEFIPER 294
+V E +R+ + R + G +I + ++ + RD +V+ PDEF R
Sbjct: 303 LVDEAVRWTAPVKSFMRTALADTEVRGQNIKRGDRIMLSYPSANRDEEVFSNPDEFDITR 362
Query: 295 FVGSNIDMGGQNFEFIPFGAGRRICAGLPIAMPIVELALANLLYKF 340
F N +G FG G +C G +A +++ LL K
Sbjct: 363 F--PNRHLG--------FGWGAHMCLGQHLAKLEMKIFFEELLPKL 398
>pdb|2QHK|A Chain A, Crystal Structure Of Methyl-Accepting Chemotaxis Protein
From Vibrio Parahaemolyticus Rimd 2210633
Length = 174
Score = 28.9 bits (63), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 17/28 (60%)
Query: 330 ELALANLLYKFDWTMPRGMEIDDLDYDV 357
+L A L K+DW + G+ IDD+D V
Sbjct: 131 KLGYAEYLQKWDWVLGTGIYIDDIDQQV 158
>pdb|2CSU|A Chain A, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3
pdb|2CSU|B Chain B, Crystal Structure Of Ph0766 From Pyrococcus Horikoshii Ot3
Length = 457
Score = 28.1 bits (61), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 17/65 (26%), Positives = 30/65 (46%)
Query: 147 PKVAEQEDLIDVLLVSNRRSWYYIKKLIFPDENIAATDTIKVTLEWAMTNLMKNAEAMKK 206
P A ++ +D + + +Y KL+ D N+ I V +A L ++AE + +
Sbjct: 336 PPXAAVKNPVDXIASARGEDYYRTAKLLLQDPNVDXLIAICVVPTFAGXTLTEHAEGIIR 395
Query: 207 VQKEV 211
KEV
Sbjct: 396 AVKEV 400
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.323 0.138 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 10,841,039
Number of Sequences: 62578
Number of extensions: 453160
Number of successful extensions: 1420
Number of sequences better than 100.0: 173
Number of HSP's better than 100.0 without gapping: 120
Number of HSP's successfully gapped in prelim test: 53
Number of HSP's that attempted gapping in prelim test: 1166
Number of HSP's gapped (non-prelim): 179
length of query: 377
length of database: 14,973,337
effective HSP length: 100
effective length of query: 277
effective length of database: 8,715,537
effective search space: 2414203749
effective search space used: 2414203749
T: 11
A: 40
X1: 16 ( 7.5 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (22.0 bits)
S2: 52 (24.6 bits)