Query 037822
Match_columns 497
No_of_seqs 236 out of 3899
Neff 10.8
Searched_HMMs 46136
Date Fri Mar 29 04:43:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037822.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037822hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN00113 leucine-rich repeat r 100.0 1.2E-51 2.6E-56 445.4 32.5 471 2-497 84-583 (968)
2 PLN00113 leucine-rich repeat r 100.0 6.1E-51 1.3E-55 439.9 34.2 467 13-497 65-559 (968)
3 KOG4194 Membrane glycoprotein 100.0 4.6E-38 1E-42 291.2 7.6 388 18-492 53-446 (873)
4 KOG4194 Membrane glycoprotein 100.0 3.2E-37 6.9E-42 285.7 4.1 365 18-413 79-447 (873)
5 KOG0472 Leucine-rich repeat pr 100.0 2.7E-37 5.8E-42 274.0 -12.4 448 18-497 46-540 (565)
6 KOG0618 Serine/threonine phosp 100.0 1.8E-33 3.9E-38 274.2 -5.5 439 18-496 46-487 (1081)
7 KOG0444 Cytoskeletal regulator 100.0 3.7E-33 8E-38 261.0 -3.8 365 40-474 6-375 (1255)
8 KOG0472 Leucine-rich repeat pr 100.0 2.6E-34 5.6E-39 255.1 -14.4 430 18-474 69-541 (565)
9 KOG0618 Serine/threonine phosp 100.0 8.2E-32 1.8E-36 262.7 -8.1 440 19-497 23-464 (1081)
10 KOG0444 Cytoskeletal regulator 99.9 5.6E-30 1.2E-34 239.8 -3.4 367 16-422 6-379 (1255)
11 PLN03210 Resistant to P. syrin 99.9 2.4E-23 5.3E-28 225.6 25.9 341 32-391 549-903 (1153)
12 PLN03210 Resistant to P. syrin 99.9 1.6E-22 3.4E-27 219.4 27.2 330 18-368 559-905 (1153)
13 KOG4237 Extracellular matrix p 99.9 2.1E-26 4.5E-31 204.7 -6.3 96 249-344 263-358 (498)
14 KOG4237 Extracellular matrix p 99.9 2.3E-24 4.9E-29 191.8 -2.5 419 22-495 51-498 (498)
15 PRK15387 E3 ubiquitin-protein 99.8 1.4E-19 3.1E-24 182.7 17.1 265 166-481 201-465 (788)
16 PRK15387 E3 ubiquitin-protein 99.8 5.5E-19 1.2E-23 178.5 16.6 259 143-444 202-460 (788)
17 PRK15370 E3 ubiquitin-protein 99.8 2.3E-18 4.9E-23 175.2 12.0 250 192-474 179-428 (754)
18 cd00116 LRR_RI Leucine-rich re 99.7 2.5E-19 5.4E-24 169.6 0.6 116 305-420 162-293 (319)
19 PRK15370 E3 ubiquitin-protein 99.7 1.2E-17 2.6E-22 170.0 11.8 204 215-442 221-428 (754)
20 cd00116 LRR_RI Leucine-rich re 99.7 1.8E-19 3.9E-24 170.6 -2.6 104 21-125 2-119 (319)
21 KOG0617 Ras suppressor protein 99.6 7.8E-18 1.7E-22 133.3 -4.2 171 7-187 23-193 (264)
22 KOG0617 Ras suppressor protein 99.6 7E-18 1.5E-22 133.6 -5.8 183 258-447 31-217 (264)
23 KOG1259 Nischarin, modulator o 99.3 4.1E-13 8.8E-18 116.4 -0.3 205 275-497 205-411 (490)
24 KOG1909 Ran GTPase-activating 99.3 1.2E-13 2.5E-18 122.4 -3.9 136 283-418 156-311 (382)
25 KOG1909 Ran GTPase-activating 99.3 3.8E-13 8.3E-18 119.1 -1.9 143 279-421 87-257 (382)
26 KOG0532 Leucine-rich repeat (L 99.2 4.2E-13 9.2E-18 126.1 -3.8 170 310-497 77-246 (722)
27 KOG3207 Beta-tubulin folding c 99.2 2.4E-12 5.2E-17 117.4 0.8 141 354-496 195-337 (505)
28 COG4886 Leucine-rich repeat (L 99.2 1.8E-11 3.9E-16 119.2 6.5 195 264-476 97-292 (394)
29 PF14580 LRR_9: Leucine-rich r 99.2 3.9E-12 8.5E-17 105.8 0.7 102 18-124 20-123 (175)
30 PF14580 LRR_9: Leucine-rich r 99.1 4.8E-11 1E-15 99.3 5.2 109 307-420 18-128 (175)
31 KOG0532 Leucine-rich repeat (L 99.1 1.6E-12 3.5E-17 122.2 -5.2 193 236-440 76-271 (722)
32 KOG3207 Beta-tubulin folding c 99.1 2E-11 4.3E-16 111.5 0.4 191 134-344 113-313 (505)
33 COG4886 Leucine-rich repeat (L 99.1 1.8E-10 4E-15 112.1 6.2 198 239-447 97-295 (394)
34 KOG4658 Apoptotic ATPase [Sign 99.0 2E-10 4.3E-15 119.6 4.4 104 18-123 546-651 (889)
35 PF13855 LRR_8: Leucine rich r 99.0 3.1E-10 6.6E-15 77.7 3.8 61 17-77 1-61 (61)
36 KOG1259 Nischarin, modulator o 98.9 2.1E-10 4.5E-15 99.9 1.3 130 258-394 282-412 (490)
37 PF13855 LRR_8: Leucine rich r 98.9 8.2E-10 1.8E-14 75.5 3.7 61 41-101 1-61 (61)
38 PLN03150 hypothetical protein; 98.9 2.6E-09 5.5E-14 109.0 8.8 105 18-123 419-524 (623)
39 PLN03150 hypothetical protein; 98.9 4.5E-09 9.8E-14 107.3 7.7 112 309-421 419-531 (623)
40 KOG4658 Apoptotic ATPase [Sign 98.7 1E-08 2.2E-13 107.0 5.8 266 213-492 522-801 (889)
41 KOG2120 SCF ubiquitin ligase, 98.7 3E-10 6.5E-15 98.8 -6.8 158 42-202 186-349 (419)
42 KOG0531 Protein phosphatase 1, 98.7 3.3E-09 7.2E-14 103.5 -0.6 212 215-441 73-289 (414)
43 KOG1859 Leucine-rich repeat pr 98.6 9.5E-10 2.1E-14 106.8 -5.4 178 301-497 102-291 (1096)
44 KOG0531 Protein phosphatase 1, 98.6 4.2E-09 9.1E-14 102.8 -1.5 240 234-497 71-317 (414)
45 KOG2120 SCF ubiquitin ligase, 98.6 9.2E-10 2E-14 95.8 -5.9 178 236-416 186-374 (419)
46 KOG2982 Uncharacterized conser 98.6 1.5E-08 3.2E-13 88.5 0.4 209 255-467 66-285 (418)
47 KOG4341 F-box protein containi 98.4 4.6E-09 9.9E-14 95.8 -6.9 61 236-296 321-384 (483)
48 KOG2982 Uncharacterized conser 98.4 6.2E-08 1.4E-12 84.6 0.3 38 236-273 225-262 (418)
49 KOG1859 Leucine-rich repeat pr 98.4 5.9E-09 1.3E-13 101.5 -6.7 128 18-155 165-292 (1096)
50 COG5238 RNA1 Ran GTPase-activa 98.3 4.7E-08 1E-12 84.3 -2.4 134 284-418 157-316 (388)
51 KOG4341 F-box protein containi 98.3 8.7E-09 1.9E-13 94.0 -8.1 60 143-202 139-201 (483)
52 COG5238 RNA1 Ran GTPase-activa 98.2 1.1E-07 2.4E-12 82.0 -2.0 43 136-178 86-132 (388)
53 KOG1644 U2-associated snRNP A' 98.2 2.5E-06 5.4E-11 70.6 5.5 103 19-124 21-123 (233)
54 KOG4579 Leucine-rich repeat (L 98.0 2.2E-07 4.7E-12 71.7 -3.6 35 309-344 78-112 (177)
55 PRK15386 type III secretion pr 98.0 2.2E-05 4.7E-10 74.0 8.4 134 258-415 50-187 (426)
56 PF12799 LRR_4: Leucine Rich r 98.0 5E-06 1.1E-10 51.8 2.9 15 37-51 20-34 (44)
57 KOG1644 U2-associated snRNP A' 98.0 1.8E-05 3.9E-10 65.7 6.5 104 332-438 42-149 (233)
58 KOG3665 ZYG-1-like serine/thre 98.0 1E-06 2.2E-11 90.0 -1.0 121 355-479 147-268 (699)
59 PF12799 LRR_4: Leucine Rich r 98.0 7.7E-06 1.7E-10 51.0 3.0 36 42-78 2-37 (44)
60 KOG4579 Leucine-rich repeat (L 97.9 3.6E-07 7.8E-12 70.6 -3.9 104 310-418 29-136 (177)
61 KOG3665 ZYG-1-like serine/thre 97.8 4.7E-06 1E-10 85.2 -0.2 153 236-390 123-284 (699)
62 PF13306 LRR_5: Leucine rich r 97.8 7.1E-05 1.5E-09 60.1 6.5 121 304-431 8-128 (129)
63 PF13306 LRR_5: Leucine rich r 97.8 0.00011 2.4E-09 59.0 7.4 81 257-340 9-89 (129)
64 KOG2739 Leucine-rich acidic nu 97.7 1.8E-05 3.9E-10 68.6 2.3 102 18-121 44-150 (260)
65 PRK15386 type III secretion pr 97.5 0.00021 4.5E-09 67.6 7.0 84 328-425 48-134 (426)
66 KOG2123 Uncharacterized conser 97.5 2.3E-06 5E-11 74.4 -5.7 105 12-120 14-123 (388)
67 KOG2739 Leucine-rich acidic nu 97.4 5.5E-05 1.2E-09 65.7 1.0 90 33-124 35-126 (260)
68 KOG1947 Leucine rich repeat pr 97.3 2.6E-05 5.7E-10 78.3 -2.0 15 402-416 359-373 (482)
69 KOG1947 Leucine rich repeat pr 97.2 2.7E-05 5.9E-10 78.3 -3.2 229 258-496 186-438 (482)
70 KOG2123 Uncharacterized conser 96.8 3.8E-05 8.2E-10 67.0 -5.3 101 283-387 18-123 (388)
71 PF00560 LRR_1: Leucine Rich R 95.5 0.0066 1.4E-07 31.2 1.0 22 462-484 1-22 (22)
72 KOG3864 Uncharacterized conser 94.8 0.0016 3.6E-08 54.4 -3.9 33 310-342 103-135 (221)
73 KOG3864 Uncharacterized conser 94.3 0.0052 1.1E-07 51.5 -2.1 35 460-494 150-185 (221)
74 KOG4308 LRR-containing protein 94.1 0.00019 4.2E-09 70.4 -12.9 88 331-418 203-303 (478)
75 KOG4308 LRR-containing protein 93.3 0.00038 8.3E-09 68.3 -12.3 34 215-248 263-303 (478)
76 PF13516 LRR_6: Leucine Rich r 92.6 0.039 8.4E-07 29.0 0.2 23 460-482 1-23 (24)
77 PF13504 LRR_7: Leucine rich r 92.5 0.08 1.7E-06 25.1 1.2 10 67-76 3-12 (17)
78 smart00369 LRR_TYP Leucine-ric 90.0 0.23 5E-06 26.6 1.7 22 460-481 1-22 (26)
79 smart00370 LRR Leucine-rich re 90.0 0.23 5E-06 26.6 1.7 22 460-481 1-22 (26)
80 smart00370 LRR Leucine-rich re 89.7 0.28 6.1E-06 26.2 1.8 13 66-78 3-15 (26)
81 smart00369 LRR_TYP Leucine-ric 89.7 0.28 6.1E-06 26.2 1.8 13 66-78 3-15 (26)
82 KOG0473 Leucine-rich repeat pr 89.1 0.0092 2E-07 51.1 -6.5 81 18-101 43-123 (326)
83 KOG0473 Leucine-rich repeat pr 80.1 0.042 9.1E-07 47.3 -6.6 84 258-344 40-123 (326)
84 smart00368 LRR_RI Leucine rich 76.0 1.9 4.2E-05 23.5 1.4 16 356-371 2-17 (28)
85 smart00365 LRR_SD22 Leucine-ri 71.9 3.7 8.1E-05 22.0 1.8 14 89-102 2-15 (26)
86 KOG4242 Predicted myosin-I-bin 67.0 13 0.00029 36.1 5.6 15 406-420 355-369 (553)
87 smart00364 LRR_BAC Leucine-ric 64.6 5.1 0.00011 21.5 1.4 13 66-78 3-15 (26)
88 smart00367 LRR_CC Leucine-rich 59.6 6.7 0.00015 20.8 1.4 13 484-496 1-13 (26)
89 KOG3763 mRNA export factor TAP 59.2 5.3 0.00012 39.5 1.6 36 283-318 217-254 (585)
90 KOG4242 Predicted myosin-I-bin 44.2 1.1E+02 0.0025 30.1 7.6 84 18-102 215-312 (553)
91 KOG3763 mRNA export factor TAP 39.3 20 0.00044 35.6 2.1 35 332-366 218-254 (585)
No 1
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=1.2e-51 Score=445.43 Aligned_cols=471 Identities=32% Similarity=0.476 Sum_probs=289.5
Q ss_pred CCCccccCCCCCCCCCCccEEEcCCCCCcccCCccc-cCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCccc
Q 037822 2 EVSDFIDGLSECTNSSLLEKLELGFNQLNGDLPSSL-GYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGK 80 (497)
Q Consensus 2 ~~~~~l~~l~~~~~~~~L~~L~l~~~~i~~~~~~~~-~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~ 80 (497)
.+|..+..++ +|++|++++|++.+.+|..+ ..+++|++|++++|.+.+.+|. ..+++|++|++++|.+++.
T Consensus 84 ~~~~~~~~l~------~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L~~L~Ls~n~~~~~ 155 (968)
T PLN00113 84 KISSAIFRLP------YIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNLETLDLSNNMLSGE 155 (968)
T ss_pred cCChHHhCCC------CCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCCCEEECcCCccccc
Confidence 3455555555 78888888887776666554 3777777777777776655553 3466666666666666656
Q ss_pred CCccCCCCCCCCEEEcCCCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCc
Q 037822 81 FPENFGQLSAVEVLDLSENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPT 160 (497)
Q Consensus 81 ~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~ 160 (497)
.|..+..+++|++|++++|.+.+.+|. .+.++++|+.|++++|. ....++..+..+++|+.|++++|.+....|.
T Consensus 156 ~p~~~~~l~~L~~L~L~~n~l~~~~p~-~~~~l~~L~~L~L~~n~----l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~ 230 (968)
T PLN00113 156 IPNDIGSFSSLKVLDLGGNVLVGKIPN-SLTNLTSLEFLTLASNQ----LVGQIPRELGQMKSLKWIYLGYNNLSGEIPY 230 (968)
T ss_pred CChHHhcCCCCCEEECccCcccccCCh-hhhhCcCCCeeeccCCC----CcCcCChHHcCcCCccEEECcCCccCCcCCh
Confidence 666666666666666666666554444 56666666666666642 2233455555556666666666666555566
Q ss_pred cccCCCCccEEEeeccccccccCchhhhcccCccEEEcccccccccCCccc-cccCCCEEEccCCccccCCCCC---ccc
Q 037822 161 WLRNQTELTTLVLNNVRISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSL-GFRFPATVDLSSNSFEGPLPLW---SFN 236 (497)
Q Consensus 161 ~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~~~~l~~l~l~~~~~~~~~~~~---~~~ 236 (497)
.++.+++|+.|++++|.+.+..|..+..+ ++|++|++++|.+.+..|..+ .+++|+.+++++|.+.+..|.. .++
T Consensus 231 ~l~~l~~L~~L~L~~n~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l~~~~p~~~~~l~~ 309 (968)
T PLN00113 231 EIGGLTSLNHLDLVYNNLTGPIPSSLGNL-KNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSLSGEIPELVIQLQN 309 (968)
T ss_pred hHhcCCCCCEEECcCceeccccChhHhCC-CCCCEEECcCCeeeccCchhHhhccCcCEEECcCCeeccCCChhHcCCCC
Confidence 66666666666666666555555555544 356666666665555444333 3455555666555555444432 235
Q ss_pred cceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccC---------------
Q 037822 237 VTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIP--------------- 301 (497)
Q Consensus 237 L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~--------------- 301 (497)
|+.|++++|.+.+..|..+ ..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|
T Consensus 310 L~~L~l~~n~~~~~~~~~~-~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~~~~~~~L~~L~l~ 388 (968)
T PLN00113 310 LEILHLFSNNFTGKIPVAL-TSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEGLCSSGNLFKLILF 388 (968)
T ss_pred CcEEECCCCccCCcCChhH-hcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChhHhCcCCCCEEECc
Confidence 5555555555554444333 245555555555555554445555555555555555555444444
Q ss_pred ---------cccccCCCCCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccC
Q 037822 302 ---------RLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNI 372 (497)
Q Consensus 302 ---------~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~ 372 (497)
..+..+++|+.|++++|.+++..|..+..+++|+.|++++|.+.+..+..+..+++|+.|++++|.+.+.+
T Consensus 389 ~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~~L~L~~n~~~~~~ 468 (968)
T PLN00113 389 SNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQMLSLARNKFFGGL 468 (968)
T ss_pred CCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCcEEECcCceeeeec
Confidence 44444555555555555555444445555555555555555555444444455555666666666555555
Q ss_pred ChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCc
Q 037822 373 PAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGS 452 (497)
Q Consensus 373 ~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~ 452 (497)
|.... .++|+.|++++|++++..|..+..+++|++|++++|.+.+..|+.+.++++|+.|++++|.+...
T Consensus 469 p~~~~--~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~-------- 538 (968)
T PLN00113 469 PDSFG--SKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGEIPDELSSCKKLVSLDLSHNQLSGQ-------- 538 (968)
T ss_pred Ccccc--cccceEEECcCCccCCccChhhhhhhccCEEECcCCcceeeCChHHcCccCCCEEECCCCccccc--------
Confidence 54331 45677777777777766677777777777788888777777777777777888888887777443
Q ss_pred cccccccccccCEEEccCCcccccCChhhhccCCCCeEECCCCCC
Q 037822 453 EYVFYTTLYLVNLMDLSSNNLSGEMPVELTRLIHLGTLNLSRNHL 497 (497)
Q Consensus 453 ~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~l~l~~n~i 497 (497)
.+..+..+++|++|++++|.+++.+|..+..+++|+++++++|++
T Consensus 539 ~p~~~~~l~~L~~L~Ls~N~l~~~~p~~l~~l~~L~~l~ls~N~l 583 (968)
T PLN00113 539 IPASFSEMPVLSQLDLSQNQLSGEIPKNLGNVESLVQVNISHNHL 583 (968)
T ss_pred CChhHhCcccCCEEECCCCcccccCChhHhcCcccCEEeccCCcc
Confidence 334456788888889988888888888888888888999888874
No 2
>PLN00113 leucine-rich repeat receptor-like protein kinase; Provisional
Probab=100.00 E-value=6.1e-51 Score=439.89 Aligned_cols=467 Identities=33% Similarity=0.482 Sum_probs=373.7
Q ss_pred CCCCCCccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCcccc-CCCCCCEEECcCCcCcccCCccCCCCCCC
Q 037822 13 CTNSSLLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIG-NLTFLKELYLSSNQMNGKFPENFGQLSAV 91 (497)
Q Consensus 13 ~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~-~l~~L~~L~l~~n~~~~~~~~~~~~l~~L 91 (497)
|....+++.|+++++.+.+..+.+|..+++|++|++++|.+.+.+|..+. .+++|++|++++|.+++..|. ..+++|
T Consensus 65 c~~~~~v~~L~L~~~~i~~~~~~~~~~l~~L~~L~Ls~n~~~~~ip~~~~~~l~~L~~L~Ls~n~l~~~~p~--~~l~~L 142 (968)
T PLN00113 65 CNNSSRVVSIDLSGKNISGKISSAIFRLPYIQTINLSNNQLSGPIPDDIFTTSSSLRYLNLSNNNFTGSIPR--GSIPNL 142 (968)
T ss_pred cCCCCcEEEEEecCCCccccCChHHhCCCCCCEEECCCCccCCcCChHHhccCCCCCEEECcCCccccccCc--cccCCC
Confidence 44456899999999999988899999999999999999999877776654 999999999999999876664 568999
Q ss_pred CEEEcCCCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEE
Q 037822 92 EVLDLSENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTL 171 (497)
Q Consensus 92 ~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L 171 (497)
++|++++|.+.+.++. .++++++|+.|++++|. ....++..+..+++|++|++++|.+....|..++.+++|+.|
T Consensus 143 ~~L~Ls~n~~~~~~p~-~~~~l~~L~~L~L~~n~----l~~~~p~~~~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L 217 (968)
T PLN00113 143 ETLDLSNNMLSGEIPN-DIGSFSSLKVLDLGGNV----LVGKIPNSLTNLTSLEFLTLASNQLVGQIPRELGQMKSLKWI 217 (968)
T ss_pred CEEECcCCcccccCCh-HHhcCCCCCEEECccCc----ccccCChhhhhCcCCCeeeccCCCCcCcCChHHcCcCCccEE
Confidence 9999999999876776 79999999999999963 345677888899999999999999998899999999999999
Q ss_pred EeeccccccccCchhhhcccCccEEEcccccccccCCccc-cccCCCEEEccCCccccCCCCC---ccccceEecccCcc
Q 037822 172 VLNNVRISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSL-GFRFPATVDLSSNSFEGPLPLW---SFNVTKLYLRDNSF 247 (497)
Q Consensus 172 ~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~~~~l~~l~l~~~~~~~~~~~~---~~~L~~L~l~~~~~ 247 (497)
++++|.+.+..|..+..+ ++|++|++++|.+.+..|..+ .+++|+.+++++|.+.+..|.. ..+|+.|++++|.+
T Consensus 218 ~L~~n~l~~~~p~~l~~l-~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~L~~n~l~~~~p~~l~~l~~L~~L~Ls~n~l 296 (968)
T PLN00113 218 YLGYNNLSGEIPYEIGGL-TSLNHLDLVYNNLTGPIPSSLGNLKNLQYLFLYQNKLSGPIPPSIFSLQKLISLDLSDNSL 296 (968)
T ss_pred ECcCCccCCcCChhHhcC-CCCCEEECcCceeccccChhHhCCCCCCEEECcCCeeeccCchhHhhccCcCEEECcCCee
Confidence 999999998899888777 599999999999988877665 5789999999999998877654 45899999999999
Q ss_pred cccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcc
Q 037822 248 SGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPES 327 (497)
Q Consensus 248 ~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~ 327 (497)
.+.+|..+ ..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+..|..+..+++|+.|++++|++.+..|..
T Consensus 297 ~~~~p~~~-~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~L~~n~l~~~~p~~l~~~~~L~~L~Ls~n~l~~~~p~~ 375 (968)
T PLN00113 297 SGEIPELV-IQLQNLEILHLFSNNFTGKIPVALTSLPRLQVLQLWSNKFSGEIPKNLGKHNNLTVLDLSTNNLTGEIPEG 375 (968)
T ss_pred ccCCChhH-cCCCCCcEEECCCCccCCcCChhHhcCCCCCEEECcCCCCcCcCChHHhCCCCCcEEECCCCeeEeeCChh
Confidence 87777665 57899999999999999888999999999999999999998888988999999999999999887766666
Q ss_pred cccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhh-----------------------hCCCCC
Q 037822 328 IGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGE-----------------------SMPSLS 384 (497)
Q Consensus 328 l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~-----------------------~~~~L~ 384 (497)
+..+++|+.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..+.. .+++|+
T Consensus 376 ~~~~~~L~~L~l~~n~l~~~~p~~~~~~~~L~~L~L~~n~l~~~~p~~~~~l~~L~~L~Ls~N~l~~~~~~~~~~l~~L~ 455 (968)
T PLN00113 376 LCSSGNLFKLILFSNSLEGEIPKSLGACRSLRRVRLQDNSFSGELPSEFTKLPLVYFLDISNNNLQGRINSRKWDMPSLQ 455 (968)
T ss_pred HhCcCCCCEEECcCCEecccCCHHHhCCCCCCEEECcCCEeeeECChhHhcCCCCCEEECcCCcccCccChhhccCCCCc
Confidence 655555666666555555555555555555555555555555444443332 144555
Q ss_pred EEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccC
Q 037822 385 ILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVN 464 (497)
Q Consensus 385 ~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~ 464 (497)
.|++++|++.+..|..+ ..++|+.|++++|++.+..|..+.++++|+.|++++|.+... .+..+..+++|+
T Consensus 456 ~L~L~~n~~~~~~p~~~-~~~~L~~L~ls~n~l~~~~~~~~~~l~~L~~L~Ls~N~l~~~--------~p~~~~~l~~L~ 526 (968)
T PLN00113 456 MLSLARNKFFGGLPDSF-GSKRLENLDLSRNQFSGAVPRKLGSLSELMQLKLSENKLSGE--------IPDELSSCKKLV 526 (968)
T ss_pred EEECcCceeeeecCccc-ccccceEEECcCCccCCccChhhhhhhccCEEECcCCcceee--------CChHHcCccCCC
Confidence 55555555544444332 235566666666666666666666677777777777766433 334467788999
Q ss_pred EEEccCCcccccCChhhhccCCCCeEECCCCCC
Q 037822 465 LMDLSSNNLSGEMPVELTRLIHLGTLNLSRNHL 497 (497)
Q Consensus 465 ~L~l~~n~~~~~~~~~l~~l~~L~~l~l~~n~i 497 (497)
+|++++|.+++.+|..|..+++|++|++++|++
T Consensus 527 ~L~Ls~N~l~~~~p~~~~~l~~L~~L~Ls~N~l 559 (968)
T PLN00113 527 SLDLSHNQLSGQIPASFSEMPVLSQLDLSQNQL 559 (968)
T ss_pred EEECCCCcccccCChhHhCcccCCEEECCCCcc
Confidence 999999999989999999999999999999875
No 3
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=4.6e-38 Score=291.21 Aligned_cols=388 Identities=22% Similarity=0.234 Sum_probs=209.8
Q ss_pred CccEEEcCCCCCcccCCccccCCCCC--CEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEE
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNL--RYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLD 95 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L--~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 95 (497)
.-+-||+++..+.......+.++-.. +.||+++|+++...+..|.++++|+++++.+|.++ .+|.......+|+.|+
T Consensus 53 ~~~lldcs~~~lea~~~~~l~g~lp~~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~ 131 (873)
T KOG4194|consen 53 NTRLLDCSDRELEAIDKSRLKGFLPSQTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLD 131 (873)
T ss_pred CceeeecCccccccccccccCCcCccceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEe
Confidence 34557777777765544555554444 44888888887777777788888888888888877 6676666666788888
Q ss_pred cCCCccccccChhhhhcCCCCceEeccCccccceeeecccC-CCCCCccccEEEccCCcCCCCCCccccCCCCccEEEee
Q 037822 96 LSENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISS-HWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLN 174 (497)
Q Consensus 96 l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~-~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~ 174 (497)
+.+|.|++ +....+..++.||.|+++.|.+. .++. .+....++++|+|++|+|+..-...|..+.+|..|.++
T Consensus 132 L~~N~I~s-v~se~L~~l~alrslDLSrN~is-----~i~~~sfp~~~ni~~L~La~N~It~l~~~~F~~lnsL~tlkLs 205 (873)
T KOG4194|consen 132 LRHNLISS-VTSEELSALPALRSLDLSRNLIS-----EIPKPSFPAKVNIKKLNLASNRITTLETGHFDSLNSLLTLKLS 205 (873)
T ss_pred eecccccc-ccHHHHHhHhhhhhhhhhhchhh-----cccCCCCCCCCCceEEeeccccccccccccccccchheeeecc
Confidence 88888776 34446777777777777764322 1111 11111233333333333333333333333333333333
Q ss_pred ccccccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCCCccccceEecccCcccccCChh
Q 037822 175 NVRISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRD 254 (497)
Q Consensus 175 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~ 254 (497)
.|+++..-+..|..+ ++|+.|++..|.+. .+...
T Consensus 206 rNrittLp~r~Fk~L-~~L~~LdLnrN~ir---------------------------------------------ive~l 239 (873)
T KOG4194|consen 206 RNRITTLPQRSFKRL-PKLESLDLNRNRIR---------------------------------------------IVEGL 239 (873)
T ss_pred cCcccccCHHHhhhc-chhhhhhcccccee---------------------------------------------eehhh
Confidence 333332111222112 12222222222221 11122
Q ss_pred hhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCC
Q 037822 255 FGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSV 334 (497)
Q Consensus 255 ~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L 334 (497)
.+..+++|+.|.+..|.|......+|-.+.++++|+++.|++......++-++++|+.|++++|.|....++.+..+++|
T Consensus 240 tFqgL~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~~vn~g~lfgLt~L~~L~lS~NaI~rih~d~WsftqkL 319 (873)
T KOG4194|consen 240 TFQGLPSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQAVNEGWLFGLTSLEQLDLSYNAIQRIHIDSWSFTQKL 319 (873)
T ss_pred hhcCchhhhhhhhhhcCcccccCcceeeecccceeecccchhhhhhcccccccchhhhhccchhhhheeecchhhhcccc
Confidence 23455555566666665554444555555666666666665554444444555566666666666555555555555666
Q ss_pred cEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCC---cccCCCCCCCEEE
Q 037822 335 RFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIP---PELCKLPALHILD 411 (497)
Q Consensus 335 ~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~---~~l~~l~~L~~L~ 411 (497)
++|+|+.|.++...+..|..+..|++|++++|.+. .+.+..+.++.+|++||+++|.+...+. ..|..++.|+.|+
T Consensus 320 ~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~-~l~e~af~~lssL~~LdLr~N~ls~~IEDaa~~f~gl~~LrkL~ 398 (873)
T KOG4194|consen 320 KELDLSSNRITRLDEGSFRVLSQLEELNLSHNSID-HLAEGAFVGLSSLHKLDLRSNELSWCIEDAAVAFNGLPSLRKLR 398 (873)
T ss_pred eeEeccccccccCChhHHHHHHHhhhhcccccchH-HHHhhHHHHhhhhhhhcCcCCeEEEEEecchhhhccchhhhhee
Confidence 66666666655444555555556666666666554 5555555555666666666665543221 2344555566666
Q ss_pred ccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEccCCcccccCChhhhccCCCCeEE
Q 037822 412 LSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGEMPVELTRLIHLGTLN 491 (497)
Q Consensus 412 l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~l~ 491 (497)
+.+|++..+....| .++++||.|||.+|.|....|+.|..+ .|++|-
T Consensus 399 l~gNqlk~I~krAf--------------------------------sgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv 445 (873)
T KOG4194|consen 399 LTGNQLKSIPKRAF--------------------------------SGLEALEHLDLGDNAIASIQPNAFEPM-ELKELV 445 (873)
T ss_pred ecCceeeecchhhh--------------------------------ccCcccceecCCCCcceeecccccccc-hhhhhh
Confidence 66665554444444 445555666666666655556666655 555554
Q ss_pred C
Q 037822 492 L 492 (497)
Q Consensus 492 l 492 (497)
+
T Consensus 446 ~ 446 (873)
T KOG4194|consen 446 M 446 (873)
T ss_pred h
Confidence 4
No 4
>KOG4194 consensus Membrane glycoprotein LIG-1 [Signal transduction mechanisms]
Probab=100.00 E-value=3.2e-37 Score=285.70 Aligned_cols=365 Identities=23% Similarity=0.225 Sum_probs=255.0
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcC
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLS 97 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 97 (497)
.-+.|++++|.+..+.+..|.++++|+.+++.+|.++ .+|.......+|+.|++.+|.|+..-.+.+..++-|++||++
T Consensus 79 ~t~~LdlsnNkl~~id~~~f~nl~nLq~v~l~~N~Lt-~IP~f~~~sghl~~L~L~~N~I~sv~se~L~~l~alrslDLS 157 (873)
T KOG4194|consen 79 QTQTLDLSNNKLSHIDFEFFYNLPNLQEVNLNKNELT-RIPRFGHESGHLEKLDLRHNLISSVTSEELSALPALRSLDLS 157 (873)
T ss_pred ceeeeeccccccccCcHHHHhcCCcceeeeeccchhh-hcccccccccceeEEeeeccccccccHHHHHhHhhhhhhhhh
Confidence 4567999999999888888999999999999999998 788877777889999999999998877889999999999999
Q ss_pred CCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeeccc
Q 037822 98 ENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVR 177 (497)
Q Consensus 98 ~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 177 (497)
.|.|.+ ++...|..-.++++|++++|.|. .-....|..+.+|..|.|+.|+++...+..|.++++|+.|++..|+
T Consensus 158 rN~is~-i~~~sfp~~~ni~~L~La~N~It----~l~~~~F~~lnsL~tlkLsrNrittLp~r~Fk~L~~L~~LdLnrN~ 232 (873)
T KOG4194|consen 158 RNLISE-IPKPSFPAKVNIKKLNLASNRIT----TLETGHFDSLNSLLTLKLSRNRITTLPQRSFKRLPKLESLDLNRNR 232 (873)
T ss_pred hchhhc-ccCCCCCCCCCceEEeecccccc----ccccccccccchheeeecccCcccccCHHHhhhcchhhhhhccccc
Confidence 999986 55558888899999999997554 3334556667799999999999998888999999999999999999
Q ss_pred cccccCchhhhcccCccEEEcccccccccCCccc-cccCCCEEEccCCccccCCCCCccccceEecccCcccccCChhhh
Q 037822 178 ISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSL-GFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFG 256 (497)
Q Consensus 178 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~-~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~ 256 (497)
+.-.--..|.++ ++|+.+.+..|.+.....+.+ .+..+++++++.|.+. .......
T Consensus 233 irive~ltFqgL-~Sl~nlklqrN~I~kL~DG~Fy~l~kme~l~L~~N~l~----------------------~vn~g~l 289 (873)
T KOG4194|consen 233 IRIVEGLTFQGL-PSLQNLKLQRNDISKLDDGAFYGLEKMEHLNLETNRLQ----------------------AVNEGWL 289 (873)
T ss_pred eeeehhhhhcCc-hhhhhhhhhhcCcccccCcceeeecccceeecccchhh----------------------hhhcccc
Confidence 863323334444 478888888887764333322 3333333333333332 1122222
Q ss_pred cCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcE
Q 037822 257 QKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRF 336 (497)
Q Consensus 257 ~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~ 336 (497)
-.++.|+.|++++|.|....+..+..+++|++|+++.|.++...+..|..+..|++|.+++|++......+|..+.+|++
T Consensus 290 fgLt~L~~L~lS~NaI~rih~d~WsftqkL~~LdLs~N~i~~l~~~sf~~L~~Le~LnLs~Nsi~~l~e~af~~lssL~~ 369 (873)
T KOG4194|consen 290 FGLTSLEQLDLSYNAIQRIHIDSWSFTQKLKELDLSSNRITRLDEGSFRVLSQLEELNLSHNSIDHLAEGAFVGLSSLHK 369 (873)
T ss_pred cccchhhhhccchhhhheeecchhhhcccceeEeccccccccCChhHHHHHHHhhhhcccccchHHHHhhHHHHhhhhhh
Confidence 24566666666666666666666666666666666666666555556666666666666666666444555666666666
Q ss_pred EEeecceeeee---CCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEcc
Q 037822 337 LILCNNHISGE---VPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLS 413 (497)
Q Consensus 337 L~l~~~~~~~~---~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~ 413 (497)
|+|..|.+... ....|.++++|+.|++.+|++. .++...+.++++|+.|++.+|.|-...+.+|..+ +|++|.+.
T Consensus 370 LdLr~N~ls~~IEDaa~~f~gl~~LrkL~l~gNqlk-~I~krAfsgl~~LE~LdL~~NaiaSIq~nAFe~m-~Lk~Lv~n 447 (873)
T KOG4194|consen 370 LDLRSNELSWCIEDAAVAFNGLPSLRKLRLTGNQLK-SIPKRAFSGLEALEHLDLGDNAIASIQPNAFEPM-ELKELVMN 447 (873)
T ss_pred hcCcCCeEEEEEecchhhhccchhhhheeecCceee-ecchhhhccCcccceecCCCCcceeecccccccc-hhhhhhhc
Confidence 66666655432 2334555666666666666665 5555555556666666666666655555556555 55555543
No 5
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=100.00 E-value=2.7e-37 Score=274.00 Aligned_cols=448 Identities=25% Similarity=0.342 Sum_probs=281.9
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcC
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLS 97 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 97 (497)
.+..++++.|.+. ...+++..+..|.+|++.+|++. ..|.+++.+..++.+++++|++. .+|..+..+.+|..++++
T Consensus 46 ~l~~lils~N~l~-~l~~dl~nL~~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s 122 (565)
T KOG0472|consen 46 DLQKLILSHNDLE-VLREDLKNLACLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCS 122 (565)
T ss_pred chhhhhhccCchh-hccHhhhcccceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcc
Confidence 5677888888887 55567888888888888888887 67788888888888888888888 778888888888888888
Q ss_pred CCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeeccc
Q 037822 98 ENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVR 177 (497)
Q Consensus 98 ~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 177 (497)
+|.+.. +++ .++.+..|+.++..+ +.+...+..+..+.++..+++.++.+....|..+ +++.|+++|...|.
T Consensus 123 ~n~~~e-l~~-~i~~~~~l~dl~~~~-----N~i~slp~~~~~~~~l~~l~~~~n~l~~l~~~~i-~m~~L~~ld~~~N~ 194 (565)
T KOG0472|consen 123 SNELKE-LPD-SIGRLLDLEDLDATN-----NQISSLPEDMVNLSKLSKLDLEGNKLKALPENHI-AMKRLKHLDCNSNL 194 (565)
T ss_pred ccceee-cCc-hHHHHhhhhhhhccc-----cccccCchHHHHHHHHHHhhccccchhhCCHHHH-HHHHHHhcccchhh
Confidence 888876 344 577777888887776 3345566667777777777777777654444433 37777777777776
Q ss_pred cccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCC---CccccceEecccCcccccCChh
Q 037822 178 ISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPL---WSFNVTKLYLRDNSFSGPIPRD 254 (497)
Q Consensus 178 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~---~~~~L~~L~l~~~~~~~~~~~~ 254 (497)
+. ..|..++.+. +|..|++..|++. .+|++-++..+.++.++.|.+.-.... ..+.+..+++++|++. ..|..
T Consensus 195 L~-tlP~~lg~l~-~L~~LyL~~Nki~-~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklk-e~Pde 270 (565)
T KOG0472|consen 195 LE-TLPPELGGLE-SLELLYLRRNKIR-FLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLK-EVPDE 270 (565)
T ss_pred hh-cCChhhcchh-hhHHHHhhhcccc-cCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccc-cCchH
Confidence 65 5666666553 6777777777776 444444444555555555544322211 1224444444444444 34443
Q ss_pred hhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCc--------------------c-----------
Q 037822 255 FGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPR--------------------L----------- 303 (497)
Q Consensus 255 ~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~--------------------~----------- 303 (497)
++ .+.+|++||+++|.++ ..|..++++ .|+.|.+.+|.+.+.-.+ .
T Consensus 271 ~c-lLrsL~rLDlSNN~is-~Lp~sLgnl-hL~~L~leGNPlrTiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~ 347 (565)
T KOG0472|consen 271 IC-LLRSLERLDLSNNDIS-SLPYSLGNL-HLKFLALEGNPLRTIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETA 347 (565)
T ss_pred HH-HhhhhhhhcccCCccc-cCCcccccc-eeeehhhcCCchHHHHHHHHcccHHHHHHHHHHhhccCCCCCCccccccc
Confidence 32 3444444444444444 333444444 444444444432210000 0
Q ss_pred ----------cccCCCCCEEECccCcccccCCccccccc--CCcEEEeecceeeeeCCcccccCCCCCE-EecCCCcCcc
Q 037822 304 ----------WSNISSLYILDMSNNSLSGEIPESIGSLL--SVRFLILCNNHISGEVPPSLKNCSMMDS-LDLGDNQLSG 370 (497)
Q Consensus 304 ----------~~~~~~L~~L~l~~n~i~~~~~~~l~~~~--~L~~L~l~~~~~~~~~~~~~~~~~~L~~-L~l~~~~i~~ 370 (497)
....-+.+.|++++-+++..+.+.|..-. -....++++|++. .+|..+..+..+.+ +.+++|.+.
T Consensus 348 ~t~~~~~~~~~~~~i~tkiL~~s~~qlt~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is- 425 (565)
T KOG0472|consen 348 MTLPSESFPDIYAIITTKILDVSDKQLTLVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS- 425 (565)
T ss_pred CCCCCCcccchhhhhhhhhhcccccccccCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-
Confidence 00011223333333333322112221111 1333444444443 33333333332222 333344433
Q ss_pred cCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeee
Q 037822 371 NIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLK 450 (497)
Q Consensus 371 ~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~ 450 (497)
-+|..+.+ +++|..|++++|.+. .+|..++.+..|+.|+++.|.|. ..|.++..+..++++..+.+++...
T Consensus 426 fv~~~l~~-l~kLt~L~L~NN~Ln-~LP~e~~~lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~v------ 496 (565)
T KOG0472|consen 426 FVPLELSQ-LQKLTFLDLSNNLLN-DLPEEMGSLVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSV------ 496 (565)
T ss_pred cchHHHHh-hhcceeeecccchhh-hcchhhhhhhhhheecccccccc-cchHHHhhHHHHHHHHhcccccccc------
Confidence 55555554 888889999888877 67888888888999999999887 7888888888888888887877432
Q ss_pred CccccccccccccCEEEccCCcccccCChhhhccCCCCeEECCCCCC
Q 037822 451 GSEYVFYTTLYLVNLMDLSSNNLSGEMPVELTRLIHLGTLNLSRNHL 497 (497)
Q Consensus 451 ~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~l~l~~n~i 497 (497)
.+.-+..+..|..||+.+|.+. .+|..++++.+|++|+|.+|||
T Consensus 497 --d~~~l~nm~nL~tLDL~nNdlq-~IPp~LgnmtnL~hLeL~gNpf 540 (565)
T KOG0472|consen 497 --DPSGLKNMRNLTTLDLQNNDLQ-QIPPILGNMTNLRHLELDGNPF 540 (565)
T ss_pred --ChHHhhhhhhcceeccCCCchh-hCChhhccccceeEEEecCCcc
Confidence 3334678999999999999997 6788899999999999999996
No 6
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.97 E-value=1.8e-33 Score=274.19 Aligned_cols=439 Identities=25% Similarity=0.291 Sum_probs=281.6
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcC
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLS 97 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 97 (497)
+|+.|++++|++. .+|..+..+++|+.|+++.|.+. ..|.+..++.+|+++.|.+|.+. ..|..+..+.+|+.|+++
T Consensus 46 ~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~n~l~-~lP~~~~~lknl~~LdlS 122 (1081)
T KOG0618|consen 46 KLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKNNRLQ-SLPASISELKNLQYLDLS 122 (1081)
T ss_pred eeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheeccchhh-cCchhHHhhhcccccccc
Confidence 5888888888887 66778888888888888888887 66777888888888888888777 778888888888888888
Q ss_pred CCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeeccc
Q 037822 98 ENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVR 177 (497)
Q Consensus 98 ~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 177 (497)
+|.+.. +|. .+..+..++.+..++|. .... ++.. .++.+++..+.+...++..+..+.. .+++.+|.
T Consensus 123 ~N~f~~-~Pl-~i~~lt~~~~~~~s~N~-~~~~-------lg~~-~ik~~~l~~n~l~~~~~~~i~~l~~--~ldLr~N~ 189 (1081)
T KOG0618|consen 123 FNHFGP-IPL-VIEVLTAEEELAASNNE-KIQR-------LGQT-SIKKLDLRLNVLGGSFLIDIYNLTH--QLDLRYNE 189 (1081)
T ss_pred hhccCC-Cch-hHHhhhHHHHHhhhcch-hhhh-------hccc-cchhhhhhhhhcccchhcchhhhhe--eeecccch
Confidence 888765 454 56667777777776641 1011 1111 2666677777666666665655554 58888888
Q ss_pred cccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCCC-ccccceEecccCcccccCChhhh
Q 037822 178 ISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLW-SFNVTKLYLRDNSFSGPIPRDFG 256 (497)
Q Consensus 178 ~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~-~~~L~~L~l~~~~~~~~~~~~~~ 256 (497)
+....... .++++.+....|.+... ....++++.+..+.|.+....... +.+++.++++++++. .+| ...
T Consensus 190 ~~~~dls~----~~~l~~l~c~rn~ls~l---~~~g~~l~~L~a~~n~l~~~~~~p~p~nl~~~dis~n~l~-~lp-~wi 260 (1081)
T KOG0618|consen 190 MEVLDLSN----LANLEVLHCERNQLSEL---EISGPSLTALYADHNPLTTLDVHPVPLNLQYLDISHNNLS-NLP-EWI 260 (1081)
T ss_pred hhhhhhhh----ccchhhhhhhhcccceE---EecCcchheeeeccCcceeeccccccccceeeecchhhhh-cch-HHH
Confidence 76222221 24677777777765521 224567788888888877544443 338889999999887 667 444
Q ss_pred cCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccC-Cc
Q 037822 257 QKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLS-VR 335 (497)
Q Consensus 257 ~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~-L~ 335 (497)
..+++|+.++..+|.+. ..|..+....+|+.+.+..|.+. ..|.....+.+|+.|++..|.+....+..+..... |+
T Consensus 261 ~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLdL~~N~L~~lp~~~l~v~~~~l~ 338 (1081)
T KOG0618|consen 261 GACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLDLQSNNLPSLPDNFLAVLNASLN 338 (1081)
T ss_pred HhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeeeehhccccccchHHHhhhhHHHH
Confidence 67889999999999885 66777777788888888888887 66767777888999999888887433333333222 55
Q ss_pred EEEeecceeeeeCCc-ccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccC
Q 037822 336 FLILCNNHISGEVPP-SLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSH 414 (497)
Q Consensus 336 ~L~l~~~~~~~~~~~-~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~ 414 (497)
.|+.+.+.+. ..|. .=...+.|+.|.+.+|.+++..-..+. ++..|+.|+++.|++.......+.+++.|++|+|||
T Consensus 339 ~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~-~~~hLKVLhLsyNrL~~fpas~~~kle~LeeL~LSG 416 (1081)
T KOG0618|consen 339 TLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLV-NFKHLKVLHLSYNRLNSFPASKLRKLEELEELNLSG 416 (1081)
T ss_pred HHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhc-cccceeeeeecccccccCCHHHHhchHHhHHHhccc
Confidence 5555555554 2221 111234556666666666544333222 255666666666666533233455666666666666
Q ss_pred CcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEccCCcccccCChhhhccCCCCeEECCC
Q 037822 415 NNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGEMPVELTRLIHLGTLNLSR 494 (497)
Q Consensus 415 n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~l~l~~ 494 (497)
|+++ .+|.++.++..|++|..-+|++.... -+..++.|+.+|+|.|.++...-..-..-|+|++||++|
T Consensus 417 NkL~-~Lp~tva~~~~L~tL~ahsN~l~~fP----------e~~~l~qL~~lDlS~N~L~~~~l~~~~p~p~LkyLdlSG 485 (1081)
T KOG0618|consen 417 NKLT-TLPDTVANLGRLHTLRAHSNQLLSFP----------ELAQLPQLKVLDLSCNNLSEVTLPEALPSPNLKYLDLSG 485 (1081)
T ss_pred chhh-hhhHHHHhhhhhHHHhhcCCceeech----------hhhhcCcceEEecccchhhhhhhhhhCCCcccceeeccC
Confidence 6666 45566666666666666655553322 224456666666666666543211111115666666666
Q ss_pred CC
Q 037822 495 NH 496 (497)
Q Consensus 495 n~ 496 (497)
|.
T Consensus 486 N~ 487 (1081)
T KOG0618|consen 486 NT 487 (1081)
T ss_pred Cc
Confidence 63
No 7
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.97 E-value=3.7e-33 Score=260.99 Aligned_cols=365 Identities=23% Similarity=0.340 Sum_probs=259.9
Q ss_pred CCCCCEEECCCCccc-ccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcCCCccccccChhhhhcCCCCce
Q 037822 40 LKNLRYLELWHNSFV-GSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLSENQWEGIITETHFRNLSNLKE 118 (497)
Q Consensus 40 l~~L~~L~l~~~~l~-~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~ 118 (497)
++-.|-+|+++|.++ +.+|.....+++++.|.+...++. .+|+.++.+.+|++|.+++|++..+. ..+..++.||.
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~~vh--GELs~Lp~LRs 82 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLISVH--GELSDLPRLRS 82 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhHhhh--hhhccchhhHH
Confidence 344555666666665 346666666666666666666665 56666666677777777776665421 13555566666
Q ss_pred EeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeeccccccccCchhhhcccCccEEEc
Q 037822 119 LALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVRISDTIPDWFWQLDLTLDELDV 198 (497)
Q Consensus 119 L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l 198 (497)
+.+..|+.. ...+|..+.++..|+.||+++|++. ..|..+... +++-.|++
T Consensus 83 v~~R~N~LK---------------------------nsGiP~diF~l~dLt~lDLShNqL~-EvP~~LE~A-Kn~iVLNL 133 (1255)
T KOG0444|consen 83 VIVRDNNLK---------------------------NSGIPTDIFRLKDLTILDLSHNQLR-EVPTNLEYA-KNSIVLNL 133 (1255)
T ss_pred Hhhhccccc---------------------------cCCCCchhcccccceeeecchhhhh-hcchhhhhh-cCcEEEEc
Confidence 655553211 1234455556666666666666665 455554433 35556666
Q ss_pred ccccccccCCccc--cccCCCEEEccCCccccCCCCCccccceEecccCcccccCChhhhcCCCCccEEEcccCcceecc
Q 037822 199 AYNELSGSIPNSL--GFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSV 276 (497)
Q Consensus 199 ~~~~~~~~~~~~~--~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~ 276 (497)
++|+|.. +|..+ .+. .|-.|++++|++. ..|..+ ..+..|++|++++|++.-.-
T Consensus 134 S~N~Iet-IPn~lfinLt---------------------DLLfLDLS~NrLe-~LPPQ~-RRL~~LqtL~Ls~NPL~hfQ 189 (1255)
T KOG0444|consen 134 SYNNIET-IPNSLFINLT---------------------DLLFLDLSNNRLE-MLPPQI-RRLSMLQTLKLSNNPLNHFQ 189 (1255)
T ss_pred ccCcccc-CCchHHHhhH---------------------hHhhhccccchhh-hcCHHH-HHHhhhhhhhcCCChhhHHH
Confidence 6666542 22111 111 3444555555554 556555 46788888889988876444
Q ss_pred cccccCcCCccEEEeecceee-cccCcccccCCCCCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcccccC
Q 037822 277 SKSICNLQQLLTLVISNNNLS-GEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNC 355 (497)
Q Consensus 277 ~~~l~~l~~L~~L~l~~n~~~-~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~ 355 (497)
-..+..+++|++|.+++.+-+ ..+|..+..+.+|..++++.|.+. ..|+.+..+++|+.|+|++|.++ ........+
T Consensus 190 LrQLPsmtsL~vLhms~TqRTl~N~Ptsld~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W 267 (1255)
T KOG0444|consen 190 LRQLPSMTSLSVLHMSNTQRTLDNIPTSLDDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEW 267 (1255)
T ss_pred HhcCccchhhhhhhcccccchhhcCCCchhhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHH
Confidence 445556778888888886543 357888889999999999999998 78889999999999999999998 555667788
Q ss_pred CCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCccccc-CCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCccc
Q 037822 356 SMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNG-TIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVE 434 (497)
Q Consensus 356 ~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~-~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L 434 (497)
.+|++|+++.|+++ .+|..++. ++.|++|.+.+|+++- .+|++++.+.+|+.+..++|.+. .+|+.+..|.+|+.|
T Consensus 268 ~~lEtLNlSrNQLt-~LP~avcK-L~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcRC~kL~kL 344 (1255)
T KOG0444|consen 268 ENLETLNLSRNQLT-VLPDAVCK-LTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCRCVKLQKL 344 (1255)
T ss_pred hhhhhhccccchhc-cchHHHhh-hHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhhhHHHHHh
Confidence 99999999999999 99999987 9999999999999874 47899999999999999999998 899999999999999
Q ss_pred CCCCCcccccceeeeeCccccccccccccCEEEccCCccc
Q 037822 435 PPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLS 474 (497)
Q Consensus 435 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~ 474 (497)
.++.|.+.+. |..+.-++.|+.||+..|.--
T Consensus 345 ~L~~NrLiTL---------PeaIHlL~~l~vLDlreNpnL 375 (1255)
T KOG0444|consen 345 KLDHNRLITL---------PEAIHLLPDLKVLDLRENPNL 375 (1255)
T ss_pred cccccceeec---------hhhhhhcCCcceeeccCCcCc
Confidence 8888887443 344566788888888888543
No 8
>KOG0472 consensus Leucine-rich repeat protein [Function unknown]
Probab=99.97 E-value=2.6e-34 Score=255.11 Aligned_cols=430 Identities=25% Similarity=0.327 Sum_probs=241.6
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcC
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLS 97 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 97 (497)
.+.+|++.+|+.. ..|.+++.+..++.+++++|++. .+|+++..+..|+.+++++|.+. ..++.++.+..|+.++..
T Consensus 69 ~l~vl~~~~n~l~-~lp~aig~l~~l~~l~vs~n~ls-~lp~~i~s~~~l~~l~~s~n~~~-el~~~i~~~~~l~dl~~~ 145 (565)
T KOG0472|consen 69 CLTVLNVHDNKLS-QLPAAIGELEALKSLNVSHNKLS-ELPEQIGSLISLVKLDCSSNELK-ELPDSIGRLLDLEDLDAT 145 (565)
T ss_pred ceeEEEeccchhh-hCCHHHHHHHHHHHhhcccchHh-hccHHHhhhhhhhhhhcccccee-ecCchHHHHhhhhhhhcc
Confidence 6777777777776 45556777777777777777766 56666777777777777777666 555666666666666666
Q ss_pred CCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeeccc
Q 037822 98 ENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVR 177 (497)
Q Consensus 98 ~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~ 177 (497)
+|++.+ .|. .+..+.+|..+.+.+| ...+.+.....++.|+++++..|.+. .+|+.++.+.+|..|++..|+
T Consensus 146 ~N~i~s-lp~-~~~~~~~l~~l~~~~n-----~l~~l~~~~i~m~~L~~ld~~~N~L~-tlP~~lg~l~~L~~LyL~~Nk 217 (565)
T KOG0472|consen 146 NNQISS-LPE-DMVNLSKLSKLDLEGN-----KLKALPENHIAMKRLKHLDCNSNLLE-TLPPELGGLESLELLYLRRNK 217 (565)
T ss_pred cccccc-Cch-HHHHHHHHHHhhcccc-----chhhCCHHHHHHHHHHhcccchhhhh-cCChhhcchhhhHHHHhhhcc
Confidence 666654 333 3444555555555442 22233333333444444444444332 233444444444444444444
Q ss_pred ccc---------------------ccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCCC-cc
Q 037822 178 ISD---------------------TIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLW-SF 235 (497)
Q Consensus 178 ~~~---------------------~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~-~~ 235 (497)
+.. ..|...+...+++..|++..|++.+...+..-+++++.+|+++|.+++..+.. .-
T Consensus 218 i~~lPef~gcs~L~Elh~g~N~i~~lpae~~~~L~~l~vLDLRdNklke~Pde~clLrsL~rLDlSNN~is~Lp~sLgnl 297 (565)
T KOG0472|consen 218 IRFLPEFPGCSLLKELHVGENQIEMLPAEHLKHLNSLLVLDLRDNKLKEVPDEICLLRSLERLDLSNNDISSLPYSLGNL 297 (565)
T ss_pred cccCCCCCccHHHHHHHhcccHHHhhHHHHhcccccceeeeccccccccCchHHHHhhhhhhhcccCCccccCCcccccc
Confidence 430 33333332223445555555555433333334444555555555554433221 11
Q ss_pred ccceEecccCcccccCChhhhc-----CCCCccE----EEcccCcce--------ecccccccCcCCccEEEeecceeec
Q 037822 236 NVTKLYLRDNSFSGPIPRDFGQ-----KIPFLTD----LDISFNSLN--------GSVSKSICNLQQLLTLVISNNNLSG 298 (497)
Q Consensus 236 ~L~~L~l~~~~~~~~~~~~~~~-----~~~~L~~----L~l~~~~i~--------~~~~~~l~~l~~L~~L~l~~n~~~~ 298 (497)
+|+.+.+.||.+. .+-..+.. -++.|+. =-++...-+ ...........+.+.|++++-+++
T Consensus 298 hL~~L~leGNPlr-TiRr~ii~~gT~~vLKyLrs~~~~dglS~se~~~e~~~t~~~~~~~~~~~~i~tkiL~~s~~qlt- 375 (565)
T KOG0472|consen 298 HLKFLALEGNPLR-TIRREIISKGTQEVLKYLRSKIKDDGLSQSEGGTETAMTLPSESFPDIYAIITTKILDVSDKQLT- 375 (565)
T ss_pred eeeehhhcCCchH-HHHHHHHcccHHHHHHHHHHhhccCCCCCCcccccccCCCCCCcccchhhhhhhhhhcccccccc-
Confidence 4444444444332 11111100 0000110 000000000 000011222446777888777776
Q ss_pred ccCcccccC---CCCCEEECccCcccccCCcccccccCCcE-EEeecceeeeeCCcccccCCCCCEEecCCCcCcccCCh
Q 037822 299 EIPRLWSNI---SSLYILDMSNNSLSGEIPESIGSLLSVRF-LILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPA 374 (497)
Q Consensus 299 ~~~~~~~~~---~~L~~L~l~~n~i~~~~~~~l~~~~~L~~-L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~ 374 (497)
..|..+..- .-+..++++.|++. +.|..+..+..+.+ +.++.|.+. -+|..+..+++|+.|++++|.+. .+|.
T Consensus 376 ~VPdEVfea~~~~~Vt~VnfskNqL~-elPk~L~~lkelvT~l~lsnn~is-fv~~~l~~l~kLt~L~L~NN~Ln-~LP~ 452 (565)
T KOG0472|consen 376 LVPDEVFEAAKSEIVTSVNFSKNQLC-ELPKRLVELKELVTDLVLSNNKIS-FVPLELSQLQKLTFLDLSNNLLN-DLPE 452 (565)
T ss_pred cCCHHHHHHhhhcceEEEecccchHh-hhhhhhHHHHHHHHHHHhhcCccc-cchHHHHhhhcceeeecccchhh-hcch
Confidence 444433222 23777888888886 66766665555443 344555553 56667777888888888888776 7777
Q ss_pred hHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccc
Q 037822 375 WIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEY 454 (497)
Q Consensus 375 ~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~ 454 (497)
..++ +..|+.|+++.|++. .+|..+..+..++.+-.++|++....|+.+.++.+|++|++.+|-+....+.
T Consensus 453 e~~~-lv~Lq~LnlS~NrFr-~lP~~~y~lq~lEtllas~nqi~~vd~~~l~nm~nL~tLDL~nNdlq~IPp~------- 523 (565)
T KOG0472|consen 453 EMGS-LVRLQTLNLSFNRFR-MLPECLYELQTLETLLASNNQIGSVDPSGLKNMRNLTTLDLQNNDLQQIPPI------- 523 (565)
T ss_pred hhhh-hhhhheecccccccc-cchHHHhhHHHHHHHHhccccccccChHHhhhhhhcceeccCCCchhhCChh-------
Confidence 7776 667888888888776 6777777777777777777888766666688888888888888877544333
Q ss_pred cccccccccCEEEccCCccc
Q 037822 455 VFYTTLYLVNLMDLSSNNLS 474 (497)
Q Consensus 455 ~~~~~~~~L~~L~l~~n~~~ 474 (497)
++.+.+|+.|++++|.+.
T Consensus 524 --LgnmtnL~hLeL~gNpfr 541 (565)
T KOG0472|consen 524 --LGNMTNLRHLELDGNPFR 541 (565)
T ss_pred --hccccceeEEEecCCccC
Confidence 577888888888888887
No 9
>KOG0618 consensus Serine/threonine phosphatase 2C containing leucine-rich repeats, similar to SCN circadian oscillatory protein (SCOP) [Signal transduction mechanisms]
Probab=99.96 E-value=8.2e-32 Score=262.66 Aligned_cols=440 Identities=24% Similarity=0.273 Sum_probs=255.5
Q ss_pred ccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcCC
Q 037822 19 LEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLSE 98 (497)
Q Consensus 19 L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 98 (497)
+..|+++.|-+.+...+.+.+..+|+.||+++|.+. .+|..+..+.+|+.|+++.|-|. ..|....++.+|+.+++.+
T Consensus 23 ~~~ln~~~N~~l~~pl~~~~~~v~L~~l~lsnn~~~-~fp~~it~l~~L~~ln~s~n~i~-~vp~s~~~~~~l~~lnL~~ 100 (1081)
T KOG0618|consen 23 LQILNLRRNSLLSRPLEFVEKRVKLKSLDLSNNQIS-SFPIQITLLSHLRQLNLSRNYIR-SVPSSCSNMRNLQYLNLKN 100 (1081)
T ss_pred HHhhhccccccccCchHHhhheeeeEEeeccccccc-cCCchhhhHHHHhhcccchhhHh-hCchhhhhhhcchhheecc
Confidence 444555555444332333334444555555555554 45555555555555555555555 4445555555555555555
Q ss_pred CccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeecccc
Q 037822 99 NQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVRI 178 (497)
Q Consensus 99 n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~ 178 (497)
|++.. .|. .+..+++|+.|+++.| ....+|..+..++.++.+..++|..... ++... ++.+++..+.+
T Consensus 101 n~l~~-lP~-~~~~lknl~~LdlS~N-----~f~~~Pl~i~~lt~~~~~~~s~N~~~~~----lg~~~-ik~~~l~~n~l 168 (1081)
T KOG0618|consen 101 NRLQS-LPA-SISELKNLQYLDLSFN-----HFGPIPLVIEVLTAEEELAASNNEKIQR----LGQTS-IKKLDLRLNVL 168 (1081)
T ss_pred chhhc-Cch-hHHhhhcccccccchh-----ccCCCchhHHhhhHHHHHhhhcchhhhh----hcccc-chhhhhhhhhc
Confidence 55543 333 4555555555555552 2223344444444444444444411111 11111 44445544444
Q ss_pred ccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCCCccccceEecccCcccccCChhhhcC
Q 037822 179 SDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFGQK 258 (497)
Q Consensus 179 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~ 258 (497)
.+..+.+...+. . .+++.+|.+. ....-.+..++.+....|.+.... ..-+.++.++.++|.++ ..... ..
T Consensus 169 ~~~~~~~i~~l~-~--~ldLr~N~~~--~~dls~~~~l~~l~c~rn~ls~l~-~~g~~l~~L~a~~n~l~-~~~~~--p~ 239 (1081)
T KOG0618|consen 169 GGSFLIDIYNLT-H--QLDLRYNEME--VLDLSNLANLEVLHCERNQLSELE-ISGPSLTALYADHNPLT-TLDVH--PV 239 (1081)
T ss_pred ccchhcchhhhh-e--eeecccchhh--hhhhhhccchhhhhhhhcccceEE-ecCcchheeeeccCcce-eeccc--cc
Confidence 444444333221 1 3555555554 222223344444444444433211 11225556666666554 22111 23
Q ss_pred CCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEEE
Q 037822 259 IPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLI 338 (497)
Q Consensus 259 ~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~ 338 (497)
..++++++++++.+. ..|.++..+.+|+.+...+|.+. ..|..+...++|+.|.+..|.+. -+|.......+|+.|+
T Consensus 240 p~nl~~~dis~n~l~-~lp~wi~~~~nle~l~~n~N~l~-~lp~ri~~~~~L~~l~~~~nel~-yip~~le~~~sL~tLd 316 (1081)
T KOG0618|consen 240 PLNLQYLDISHNNLS-NLPEWIGACANLEALNANHNRLV-ALPLRISRITSLVSLSAAYNELE-YIPPFLEGLKSLRTLD 316 (1081)
T ss_pred cccceeeecchhhhh-cchHHHHhcccceEecccchhHH-hhHHHHhhhhhHHHHHhhhhhhh-hCCCcccccceeeeee
Confidence 445666666666665 33466666666666666666664 55555555666666666666665 3444455566666666
Q ss_pred eecceeeeeCCcc-cccCCC-CCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCc
Q 037822 339 LCNNHISGEVPPS-LKNCSM-MDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNN 416 (497)
Q Consensus 339 l~~~~~~~~~~~~-~~~~~~-L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 416 (497)
|..|.+. ..|.. +..... |+.|+.+.+.+. ..|..-...++.|+.|++.+|.+++.....+.+.++|+.|+|++|.
T Consensus 317 L~~N~L~-~lp~~~l~v~~~~l~~ln~s~n~l~-~lp~~~e~~~~~Lq~LylanN~Ltd~c~p~l~~~~hLKVLhLsyNr 394 (1081)
T KOG0618|consen 317 LQSNNLP-SLPDNFLAVLNASLNTLNVSSNKLS-TLPSYEENNHAALQELYLANNHLTDSCFPVLVNFKHLKVLHLSYNR 394 (1081)
T ss_pred ehhcccc-ccchHHHhhhhHHHHHHhhhhcccc-ccccccchhhHHHHHHHHhcCcccccchhhhccccceeeeeecccc
Confidence 6666665 33332 222222 555666666554 4443333345678899999999998777789999999999999999
Q ss_pred CcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEccCCcccccCChhhhccCCCCeEECCCCC
Q 037822 417 LSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGEMPVELTRLIHLGTLNLSRNH 496 (497)
Q Consensus 417 i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~l~l~~n~ 496 (497)
+.......+.++..|+.|.+++|++.+.. ..+..++.|++|...+|.+. ..| .+..+++|+.+|+|.|+
T Consensus 395 L~~fpas~~~kle~LeeL~LSGNkL~~Lp---------~tva~~~~L~tL~ahsN~l~-~fP-e~~~l~qL~~lDlS~N~ 463 (1081)
T KOG0618|consen 395 LNSFPASKLRKLEELEELNLSGNKLTTLP---------DTVANLGRLHTLRAHSNQLL-SFP-ELAQLPQLKVLDLSCNN 463 (1081)
T ss_pred cccCCHHHHhchHHhHHHhcccchhhhhh---------HHHHhhhhhHHHhhcCCcee-ech-hhhhcCcceEEecccch
Confidence 99666677899999999999999986543 33567899999999999998 667 78999999999999997
Q ss_pred C
Q 037822 497 L 497 (497)
Q Consensus 497 i 497 (497)
+
T Consensus 464 L 464 (1081)
T KOG0618|consen 464 L 464 (1081)
T ss_pred h
Confidence 5
No 10
>KOG0444 consensus Cytoskeletal regulator Flightless-I (contains leucine-rich and gelsolin repeats) [Cytoskeleton]
Probab=99.95 E-value=5.6e-30 Score=239.79 Aligned_cols=367 Identities=20% Similarity=0.310 Sum_probs=263.2
Q ss_pred CCCccEEEcCCCCCc-ccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEE
Q 037822 16 SSLLEKLELGFNQLN-GDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVL 94 (497)
Q Consensus 16 ~~~L~~L~l~~~~i~-~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L 94 (497)
+|-++-+|+++|.+. +.+|.+...++.++.|.+...++. .+|+.++.+.+|++|.+++|++. .+-..+..++.|+.+
T Consensus 6 LpFVrGvDfsgNDFsg~~FP~~v~qMt~~~WLkLnrt~L~-~vPeEL~~lqkLEHLs~~HN~L~-~vhGELs~Lp~LRsv 83 (1255)
T KOG0444|consen 6 LPFVRGVDFSGNDFSGDRFPHDVEQMTQMTWLKLNRTKLE-QVPEELSRLQKLEHLSMAHNQLI-SVHGELSDLPRLRSV 83 (1255)
T ss_pred cceeecccccCCcCCCCcCchhHHHhhheeEEEechhhhh-hChHHHHHHhhhhhhhhhhhhhH-hhhhhhccchhhHHH
Confidence 457788999999988 678999999999999999999887 78999999999999999999987 555678889999999
Q ss_pred EcCCCccccc-cChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEe
Q 037822 95 DLSENQWEGI-ITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVL 173 (497)
Q Consensus 95 ~l~~n~l~~~-~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l 173 (497)
+++.|++... +|. .+-++..|..|++++|+ ....|..+...+.+-.|+|++|+|.+...+-+.++..|-.||+
T Consensus 84 ~~R~N~LKnsGiP~-diF~l~dLt~lDLShNq-----L~EvP~~LE~AKn~iVLNLS~N~IetIPn~lfinLtDLLfLDL 157 (1255)
T KOG0444|consen 84 IVRDNNLKNSGIPT-DIFRLKDLTILDLSHNQ-----LREVPTNLEYAKNSIVLNLSYNNIETIPNSLFINLTDLLFLDL 157 (1255)
T ss_pred hhhccccccCCCCc-hhcccccceeeecchhh-----hhhcchhhhhhcCcEEEEcccCccccCCchHHHhhHhHhhhcc
Confidence 9999987633 555 45567778888777733 3334444444444555555555554433344445555555555
Q ss_pred eccccccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCCC---ccccceEecccCccc-c
Q 037822 174 NNVRISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLW---SFNVTKLYLRDNSFS-G 249 (497)
Q Consensus 174 ~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~---~~~L~~L~l~~~~~~-~ 249 (497)
++|++. ..|..+..+ ..|+.|++++|++ .-.-... ...|+.|.+++.+-+ .
T Consensus 158 S~NrLe-~LPPQ~RRL-~~LqtL~Ls~NPL-----------------------~hfQLrQLPsmtsL~vLhms~TqRTl~ 212 (1255)
T KOG0444|consen 158 SNNRLE-MLPPQIRRL-SMLQTLKLSNNPL-----------------------NHFQLRQLPSMTSLSVLHMSNTQRTLD 212 (1255)
T ss_pred ccchhh-hcCHHHHHH-hhhhhhhcCCChh-----------------------hHHHHhcCccchhhhhhhcccccchhh
Confidence 555543 333333333 2444555544443 2111111 125556666665322 2
Q ss_pred cCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccc
Q 037822 250 PIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIG 329 (497)
Q Consensus 250 ~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~ 329 (497)
.+|..+ ..+.+|..++++.|.+. ..|+.+-.+++|+.|++|+|.++ .+..+.....+|+.|+++.|+++ ..|.++.
T Consensus 213 N~Ptsl-d~l~NL~dvDlS~N~Lp-~vPecly~l~~LrrLNLS~N~it-eL~~~~~~W~~lEtLNlSrNQLt-~LP~avc 288 (1255)
T KOG0444|consen 213 NIPTSL-DDLHNLRDVDLSENNLP-IVPECLYKLRNLRRLNLSGNKIT-ELNMTEGEWENLETLNLSRNQLT-VLPDAVC 288 (1255)
T ss_pred cCCCch-hhhhhhhhccccccCCC-cchHHHhhhhhhheeccCcCcee-eeeccHHHHhhhhhhccccchhc-cchHHHh
Confidence 455554 56888888888888887 67777888888888899888888 56666677788888889988887 7788888
Q ss_pred cccCCcEEEeecceeee-eCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCC
Q 037822 330 SLLSVRFLILCNNHISG-EVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALH 408 (497)
Q Consensus 330 ~~~~L~~L~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~ 408 (497)
.+++|+.|.+.+|+++- -+|+.++++.+|+.+..++|.+. .+|+.++. |..|++|.+++|++. .+|+++..++.|+
T Consensus 289 KL~kL~kLy~n~NkL~FeGiPSGIGKL~~Levf~aanN~LE-lVPEglcR-C~kL~kL~L~~NrLi-TLPeaIHlL~~l~ 365 (1255)
T KOG0444|consen 289 KLTKLTKLYANNNKLTFEGIPSGIGKLIQLEVFHAANNKLE-LVPEGLCR-CVKLQKLKLDHNRLI-TLPEAIHLLPDLK 365 (1255)
T ss_pred hhHHHHHHHhccCcccccCCccchhhhhhhHHHHhhccccc-cCchhhhh-hHHHHHhccccccee-echhhhhhcCCcc
Confidence 88888888888887752 36788888888888888888886 88888876 888888888888887 6888888888888
Q ss_pred EEEccCCcCcCCCC
Q 037822 409 ILDLSHNNLSGIIP 422 (497)
Q Consensus 409 ~L~l~~n~i~~~~~ 422 (497)
.||+..|+-..-.|
T Consensus 366 vLDlreNpnLVMPP 379 (1255)
T KOG0444|consen 366 VLDLRENPNLVMPP 379 (1255)
T ss_pred eeeccCCcCccCCC
Confidence 88888887653444
No 11
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.92 E-value=2.4e-23 Score=225.64 Aligned_cols=341 Identities=19% Similarity=0.203 Sum_probs=182.8
Q ss_pred cCCccccCCCCCCEEECCCCcc------cccCCccccCCC-CCCEEECcCCcCcccCCccCCCCCCCCEEEcCCCccccc
Q 037822 32 DLPSSLGYLKNLRYLELWHNSF------VGSIPPSIGNLT-FLKELYLSSNQMNGKFPENFGQLSAVEVLDLSENQWEGI 104 (497)
Q Consensus 32 ~~~~~~~~l~~L~~L~l~~~~l------~~~~~~~l~~l~-~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l~~~ 104 (497)
..+.+|.++++|+.|.+..+.. ...+|..+..++ +|+.|.+.++.+. .+|..+ ...+|++|++.+|.+..
T Consensus 549 i~~~aF~~m~~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~~- 625 (1153)
T PLN03210 549 IHENAFKGMRNLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLEK- 625 (1153)
T ss_pred ecHHHHhcCccccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCccccc-
Confidence 4456788999999999866532 224667777765 5999999999887 667776 57899999999998875
Q ss_pred cChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeeccccccccCc
Q 037822 105 ITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVRISDTIPD 184 (497)
Q Consensus 105 ~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~ 184 (497)
++. .+..+++|+.|+++++. ....++ .+..+++|+.|++.+|.....+|..+..+++|+.|++++|......|.
T Consensus 626 L~~-~~~~l~~Lk~L~Ls~~~----~l~~ip-~ls~l~~Le~L~L~~c~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~ 699 (1153)
T PLN03210 626 LWD-GVHSLTGLRNIDLRGSK----NLKEIP-DLSMATNLETLKLSDCSSLVELPSSIQYLNKLEDLDMSRCENLEILPT 699 (1153)
T ss_pred ccc-ccccCCCCCEEECCCCC----CcCcCC-ccccCCcccEEEecCCCCccccchhhhccCCCCEEeCCCCCCcCccCC
Confidence 333 46778889999988742 222333 356677888888888776667777788888888888887754445554
Q ss_pred hhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCC-CccccceEecccCcccc------cCChhhhc
Q 037822 185 WFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPL-WSFNVTKLYLRDNSFSG------PIPRDFGQ 257 (497)
Q Consensus 185 ~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~-~~~~L~~L~l~~~~~~~------~~~~~~~~ 257 (497)
.. . .++|+.|++++|......|.. ..+++.++++++.+...... .+++|+.|.+.++.... ..+.....
T Consensus 700 ~i-~-l~sL~~L~Lsgc~~L~~~p~~--~~nL~~L~L~~n~i~~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~ 775 (1153)
T PLN03210 700 GI-N-LKSLYRLNLSGCSRLKSFPDI--STNISWLDLDETAIEEFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTM 775 (1153)
T ss_pred cC-C-CCCCCEEeCCCCCCccccccc--cCCcCeeecCCCccccccccccccccccccccccchhhccccccccchhhhh
Confidence 43 2 246777777776543333321 23455555555554322111 12344444444322100 00000111
Q ss_pred CCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEE
Q 037822 258 KIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFL 337 (497)
Q Consensus 258 ~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L 337 (497)
.++.|+.|++++|......|..++++++|+.|++++|...+.+|... .+++|+.|++++|......|.. .++|++|
T Consensus 776 ~~~sL~~L~Ls~n~~l~~lP~si~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L 851 (1153)
T PLN03210 776 LSPSLTRLFLSDIPSLVELPSSIQNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDL 851 (1153)
T ss_pred ccccchheeCCCCCCccccChhhhCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEe
Confidence 23344444444444333444444444444444444443222333332 3444444444444322122211 2344444
Q ss_pred EeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCc
Q 037822 338 ILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSN 391 (497)
Q Consensus 338 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n 391 (497)
++++|.+. .+|..+..+++|+.|++++|.-...++..+.. +++|+.+++++|
T Consensus 852 ~Ls~n~i~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~-L~~L~~L~l~~C 903 (1153)
T PLN03210 852 NLSRTGIE-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISK-LKHLETVDFSDC 903 (1153)
T ss_pred ECCCCCCc-cChHHHhcCCCCCEEECCCCCCcCccCccccc-ccCCCeeecCCC
Confidence 44444443 33444444444444444443222233333222 444444444444
No 12
>PLN03210 Resistant to P. syringae 6; Provisional
Probab=99.91 E-value=1.6e-22 Score=219.42 Aligned_cols=330 Identities=20% Similarity=0.259 Sum_probs=257.4
Q ss_pred CccEEEcCCCC------CcccCCccccCCC-CCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCC
Q 037822 18 LLEKLELGFNQ------LNGDLPSSLGYLK-NLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSA 90 (497)
Q Consensus 18 ~L~~L~l~~~~------i~~~~~~~~~~l~-~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~ 90 (497)
+|+.|.+..+. +...+|..|..++ +|+.|.+.++.+. .+|..| ...+|++|++.+|.+. .++..+..+++
T Consensus 559 ~L~~L~~~~~~~~~~~~~~~~lp~~~~~lp~~Lr~L~~~~~~l~-~lP~~f-~~~~L~~L~L~~s~l~-~L~~~~~~l~~ 635 (1153)
T PLN03210 559 NLLFLKFYTKKWDQKKEVRWHLPEGFDYLPPKLRLLRWDKYPLR-CMPSNF-RPENLVKLQMQGSKLE-KLWDGVHSLTG 635 (1153)
T ss_pred cccEEEEecccccccccceeecCcchhhcCcccEEEEecCCCCC-CCCCcC-CccCCcEEECcCcccc-ccccccccCCC
Confidence 88888886543 2334666777764 6999999999887 677776 5789999999999988 67788889999
Q ss_pred CCEEEcCCCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccE
Q 037822 91 VEVLDLSENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTT 170 (497)
Q Consensus 91 L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~ 170 (497)
|+.|+++++.....++ .+..+++|+.|++.+| .....++..+..+++|+.|++++|.....+|..+ .+++|+.
T Consensus 636 Lk~L~Ls~~~~l~~ip--~ls~l~~Le~L~L~~c----~~L~~lp~si~~L~~L~~L~L~~c~~L~~Lp~~i-~l~sL~~ 708 (1153)
T PLN03210 636 LRNIDLRGSKNLKEIP--DLSMATNLETLKLSDC----SSLVELPSSIQYLNKLEDLDMSRCENLEILPTGI-NLKSLYR 708 (1153)
T ss_pred CCEEECCCCCCcCcCC--ccccCCcccEEEecCC----CCccccchhhhccCCCCEEeCCCCCCcCccCCcC-CCCCCCE
Confidence 9999999876433455 3778899999999886 3456677888888999999999987666667655 7899999
Q ss_pred EEeeccccccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCcccc----------CCCCCccccceE
Q 037822 171 LVLNNVRISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEG----------PLPLWSFNVTKL 240 (497)
Q Consensus 171 L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~----------~~~~~~~~L~~L 240 (497)
|++++|......|.. ..+|++|+++++.+. ..|..+.+++|..|.+.++.... .....+++|+.|
T Consensus 709 L~Lsgc~~L~~~p~~----~~nL~~L~L~~n~i~-~lP~~~~l~~L~~L~l~~~~~~~l~~~~~~l~~~~~~~~~sL~~L 783 (1153)
T PLN03210 709 LNLSGCSRLKSFPDI----STNISWLDLDETAIE-EFPSNLRLENLDELILCEMKSEKLWERVQPLTPLMTMLSPSLTRL 783 (1153)
T ss_pred EeCCCCCCccccccc----cCCcCeeecCCCccc-cccccccccccccccccccchhhccccccccchhhhhccccchhe
Confidence 999998755444432 258999999999876 56666677888888777643211 111224589999
Q ss_pred ecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcc
Q 037822 241 YLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSL 320 (497)
Q Consensus 241 ~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i 320 (497)
++++|.....+|..+ ..+++|+.|++++|...+..|... .+++|+.|++++|.....+|.. .++|++|++++|.+
T Consensus 784 ~Ls~n~~l~~lP~si-~~L~~L~~L~Ls~C~~L~~LP~~~-~L~sL~~L~Ls~c~~L~~~p~~---~~nL~~L~Ls~n~i 858 (1153)
T PLN03210 784 FLSDIPSLVELPSSI-QNLHKLEHLEIENCINLETLPTGI-NLESLESLDLSGCSRLRTFPDI---STNISDLNLSRTGI 858 (1153)
T ss_pred eCCCCCCccccChhh-hCCCCCCEEECCCCCCcCeeCCCC-CccccCEEECCCCCcccccccc---ccccCEeECCCCCC
Confidence 999998776788876 579999999999987555566555 6899999999998755455543 46899999999999
Q ss_pred cccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcC
Q 037822 321 SGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQL 368 (497)
Q Consensus 321 ~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i 368 (497)
. ..|..+..+++|++|++++|.-...++.....+++|+.+++++|.-
T Consensus 859 ~-~iP~si~~l~~L~~L~L~~C~~L~~l~~~~~~L~~L~~L~l~~C~~ 905 (1153)
T PLN03210 859 E-EVPWWIEKFSNLSFLDMNGCNNLQRVSLNISKLKHLETVDFSDCGA 905 (1153)
T ss_pred c-cChHHHhcCCCCCEEECCCCCCcCccCcccccccCCCeeecCCCcc
Confidence 8 6788899999999999999765446777788899999999999953
No 13
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.90 E-value=2.1e-26 Score=204.70 Aligned_cols=96 Identities=22% Similarity=0.295 Sum_probs=72.8
Q ss_pred ccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCccc
Q 037822 249 GPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESI 328 (497)
Q Consensus 249 ~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l 328 (497)
+..|...++.+++|++|++++|++++....+|.+...+++|.+..|++......+|.++..|+.|++++|+|+...|.+|
T Consensus 263 ~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L~~N~it~~~~~aF 342 (498)
T KOG4237|consen 263 SICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSLYDNQITTVAPGAF 342 (498)
T ss_pred CcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeeecCCeeEEEecccc
Confidence 35566666777888888888888877777777777888888888887776666677777888888888888877777777
Q ss_pred ccccCCcEEEeeccee
Q 037822 329 GSLLSVRFLILCNNHI 344 (497)
Q Consensus 329 ~~~~~L~~L~l~~~~~ 344 (497)
....+|.+|.+-.|.+
T Consensus 343 ~~~~~l~~l~l~~Np~ 358 (498)
T KOG4237|consen 343 QTLFSLSTLNLLSNPF 358 (498)
T ss_pred cccceeeeeehccCcc
Confidence 7777788887776655
No 14
>KOG4237 consensus Extracellular matrix protein slit, contains leucine-rich and EGF-like repeats [Extracellular structures; Signal transduction mechanisms]
Probab=99.87 E-value=2.3e-24 Score=191.79 Aligned_cols=419 Identities=22% Similarity=0.205 Sum_probs=236.5
Q ss_pred EEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcCC-Cc
Q 037822 22 LELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLSE-NQ 100 (497)
Q Consensus 22 L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~-n~ 100 (497)
++.++..++ .+|..+. ..-..++|..|+|+.+.|.+|+.+++||.|||++|.|+.+.|++|.++++|.+|-+.+ |+
T Consensus 51 VdCr~~GL~-eVP~~LP--~~tveirLdqN~I~~iP~~aF~~l~~LRrLdLS~N~Is~I~p~AF~GL~~l~~Lvlyg~Nk 127 (498)
T KOG4237|consen 51 VDCRGKGLT-EVPANLP--PETVEIRLDQNQISSIPPGAFKTLHRLRRLDLSKNNISFIAPDAFKGLASLLSLVLYGNNK 127 (498)
T ss_pred EEccCCCcc-cCcccCC--CcceEEEeccCCcccCChhhccchhhhceecccccchhhcChHhhhhhHhhhHHHhhcCCc
Confidence 455555555 3444443 3556778888888877778888899999999999998888888898888888877776 88
Q ss_pred cccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCCCccEEEeecccccc
Q 037822 101 WEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVRISD 180 (497)
Q Consensus 101 l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~ 180 (497)
|++ ++..+|+.+..|+.|.+.-|.++ ....+.+..++.+..|.+.++.+.......+..+..++.+.+..|.+..
T Consensus 128 I~~-l~k~~F~gL~slqrLllNan~i~----Cir~~al~dL~~l~lLslyDn~~q~i~~~tf~~l~~i~tlhlA~np~ic 202 (498)
T KOG4237|consen 128 ITD-LPKGAFGGLSSLQRLLLNANHIN----CIRQDALRDLPSLSLLSLYDNKIQSICKGTFQGLAAIKTLHLAQNPFIC 202 (498)
T ss_pred hhh-hhhhHhhhHHHHHHHhcChhhhc----chhHHHHHHhhhcchhcccchhhhhhccccccchhccchHhhhcCcccc
Confidence 876 66668888888888777654322 1122223333344444444443332222234444444444444443211
Q ss_pred ccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCCCccccceEecccCcccccCChhhhcCCC
Q 037822 181 TIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFGQKIP 260 (497)
Q Consensus 181 ~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~ 260 (497)
. .+|+++ .. ++..+.+. -.++.-..-..+.+.++...-+..+.....
T Consensus 203 d---------CnL~wl--------------------a~-~~a~~~ie---tsgarc~~p~rl~~~Ri~q~~a~kf~c~~e 249 (498)
T KOG4237|consen 203 D---------CNLPWL--------------------AD-DLAMNPIE---TSGARCVSPYRLYYKRINQEDARKFLCSLE 249 (498)
T ss_pred c---------cccchh--------------------hh-HHhhchhh---cccceecchHHHHHHHhcccchhhhhhhHH
Confidence 0 011111 00 00000000 000111111112222222111222211111
Q ss_pred CccEEEcccC-cceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEEEe
Q 037822 261 FLTDLDISFN-SLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLIL 339 (497)
Q Consensus 261 ~L~~L~l~~~-~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l 339 (497)
.+..--.+.+ .........|..+++|++|++++|.++..-..+|.....+++|.+..|++.......|..+..|+.|+|
T Consensus 250 sl~s~~~~~d~~d~~cP~~cf~~L~~L~~lnlsnN~i~~i~~~aFe~~a~l~eL~L~~N~l~~v~~~~f~~ls~L~tL~L 329 (498)
T KOG4237|consen 250 SLPSRLSSEDFPDSICPAKCFKKLPNLRKLNLSNNKITRIEDGAFEGAAELQELYLTRNKLEFVSSGMFQGLSGLKTLSL 329 (498)
T ss_pred hHHHhhccccCcCCcChHHHHhhcccceEeccCCCccchhhhhhhcchhhhhhhhcCcchHHHHHHHhhhccccceeeee
Confidence 1111111222 222223345888999999999999999888899999999999999999998667778999999999999
Q ss_pred ecceeeeeCCcccccCCCCCEEecCCCcCccc-CChhHhh--------------hCCCCCEEEccCccccc---CCCccc
Q 037822 340 CNNHISGEVPPSLKNCSMMDSLDLGDNQLSGN-IPAWIGE--------------SMPSLSILRLRSNYFNG---TIPPEL 401 (497)
Q Consensus 340 ~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~-~~~~~~~--------------~~~~L~~L~l~~n~~~~---~~~~~l 401 (497)
++|+|+...|.+|....+|.+|.+-.|++.-. -..++.+ .+..++.+.++...+.+ ..|+..
T Consensus 330 ~~N~it~~~~~aF~~~~~l~~l~l~~Np~~CnC~l~wl~~Wlr~~~~~~~~~Cq~p~~~~~~~~~dv~~~~~~c~~~ee~ 409 (498)
T KOG4237|consen 330 YDNQITTVAPGAFQTLFSLSTLNLLSNPFNCNCRLAWLGEWLRKKSVVGNPRCQSPGFVRQIPISDVAFGDFRCGGPEEL 409 (498)
T ss_pred cCCeeEEEecccccccceeeeeehccCcccCccchHHHHHHHhhCCCCCCCCCCCCchhccccchhccccccccCCcccc
Confidence 99999988899999999999999998876421 1122222 12234455554433221 011100
Q ss_pred ---------CCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEccCCc
Q 037822 402 ---------CKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNN 472 (497)
Q Consensus 402 ---------~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~ 472 (497)
..++.+.++.=..|+....+|..+.. .-..|.+.++.+....- ..+.+| .+|+++|+
T Consensus 410 ~~~~s~~cP~~c~c~~tVvRcSnk~lk~lp~~iP~--d~telyl~gn~~~~vp~-----------~~~~~l-~~dls~n~ 475 (498)
T KOG4237|consen 410 GCLTSSPCPPPCTCLDTVVRCSNKLLKLLPRGIPV--DVTELYLDGNAITSVPD-----------ELLRSL-LLDLSNNR 475 (498)
T ss_pred CCCCCCCCCCCcchhhhhHhhcccchhhcCCCCCc--hhHHHhcccchhcccCH-----------HHHhhh-hcccccCc
Confidence 11122221111111111122222110 11123344444321110 134566 78999999
Q ss_pred ccccCChhhhccCCCCeEECCCC
Q 037822 473 LSGEMPVELTRLIHLGTLNLSRN 495 (497)
Q Consensus 473 ~~~~~~~~l~~l~~L~~l~l~~n 495 (497)
++...-..|.++.+|.+|-|++|
T Consensus 476 i~~Lsn~tf~n~tql~tlilsyn 498 (498)
T KOG4237|consen 476 ISSLSNYTFSNMTQLSTLILSYN 498 (498)
T ss_pred eehhhcccccchhhhheeEEecC
Confidence 98666677889999999998886
No 15
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.83 E-value=1.4e-19 Score=182.71 Aligned_cols=265 Identities=23% Similarity=0.235 Sum_probs=143.4
Q ss_pred CCccEEEeeccccccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEccCCccccCCCCCccccceEecccC
Q 037822 166 TELTTLVLNNVRISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDN 245 (497)
Q Consensus 166 ~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~ 245 (497)
.+-..|+++++.++ .+|..+. ++++.|++.+|.++. +|. ..+.|+.|++++|.++.. |..+++|+.|++.+|
T Consensus 201 ~~~~~LdLs~~~Lt-sLP~~l~---~~L~~L~L~~N~Lt~-LP~--lp~~Lk~LdLs~N~LtsL-P~lp~sL~~L~Ls~N 272 (788)
T PRK15387 201 NGNAVLNVGESGLT-TLPDCLP---AHITTLVIPDNNLTS-LPA--LPPELRTLEVSGNQLTSL-PVLPPGLLELSIFSN 272 (788)
T ss_pred CCCcEEEcCCCCCC-cCCcchh---cCCCEEEccCCcCCC-CCC--CCCCCcEEEecCCccCcc-cCcccccceeeccCC
Confidence 34556777777766 4565543 367777777777663 332 135666666666666643 334456666666666
Q ss_pred cccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCC
Q 037822 246 SFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIP 325 (497)
Q Consensus 246 ~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~ 325 (497)
.+. .+|. .++.|+.|++++|.++. .|. .+++|+.|++++|.+. .+|.. ..+|+.|++++|.+++ +|
T Consensus 273 ~L~-~Lp~----lp~~L~~L~Ls~N~Lt~-LP~---~p~~L~~LdLS~N~L~-~Lp~l---p~~L~~L~Ls~N~L~~-LP 338 (788)
T PRK15387 273 PLT-HLPA----LPSGLCKLWIFGNQLTS-LPV---LPPGLQELSVSDNQLA-SLPAL---PSELCKLWAYNNQLTS-LP 338 (788)
T ss_pred chh-hhhh----chhhcCEEECcCCcccc-ccc---cccccceeECCCCccc-cCCCC---cccccccccccCcccc-cc
Confidence 654 3332 23456666666666652 222 2355666666666665 23322 2345666666666652 33
Q ss_pred cccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCC
Q 037822 326 ESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLP 405 (497)
Q Consensus 326 ~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~ 405 (497)
. ...+|++|++++|.+. .+|.. .++|+.|++++|.+. .+|.. +++|+.|++++|+++ .+|.. .+
T Consensus 339 ~---lp~~Lq~LdLS~N~Ls-~LP~l---p~~L~~L~Ls~N~L~-~LP~l----~~~L~~LdLs~N~Lt-~LP~l---~s 402 (788)
T PRK15387 339 T---LPSGLQELSVSDNQLA-SLPTL---PSELYKLWAYNNRLT-SLPAL----PSGLKELIVSGNRLT-SLPVL---PS 402 (788)
T ss_pred c---cccccceEecCCCccC-CCCCC---Ccccceehhhccccc-cCccc----ccccceEEecCCccc-CCCCc---cc
Confidence 2 1235666666666665 33322 245566666666665 44432 345666666666665 34432 24
Q ss_pred CCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEccCCcccccCChhh
Q 037822 406 ALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGEMPVEL 481 (497)
Q Consensus 406 ~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l 481 (497)
+|+.|++++|++.. +|... .+|+.|++++|++.. .+..+..+++|+.|++++|++++..+..+
T Consensus 403 ~L~~LdLS~N~Lss-IP~l~---~~L~~L~Ls~NqLt~---------LP~sl~~L~~L~~LdLs~N~Ls~~~~~~L 465 (788)
T PRK15387 403 ELKELMVSGNRLTS-LPMLP---SGLLSLSVYRNQLTR---------LPESLIHLSSETTVNLEGNPLSERTLQAL 465 (788)
T ss_pred CCCEEEccCCcCCC-CCcch---hhhhhhhhccCcccc---------cChHHhhccCCCeEECCCCCCCchHHHHH
Confidence 56666666666663 34322 344555555555532 12223445556666666666655544444
No 16
>PRK15387 E3 ubiquitin-protein ligase SspH2; Provisional
Probab=99.81 E-value=5.5e-19 Score=178.51 Aligned_cols=259 Identities=24% Similarity=0.319 Sum_probs=160.0
Q ss_pred cccEEEccCCcCCCCCCccccCCCCccEEEeeccccccccCchhhhcccCccEEEcccccccccCCccccccCCCEEEcc
Q 037822 143 KLTFINIRSCQLGPKFPTWLRNQTELTTLVLNNVRISDTIPDWFWQLDLTLDELDVAYNELSGSIPNSLGFRFPATVDLS 222 (497)
Q Consensus 143 ~L~~l~l~~~~~~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~ 222 (497)
.-..|+++++.+. .+|..+. ++|+.|++.+|.++. .|. ..++|++|++++|.++. +|.. .+.|+.|++.
T Consensus 202 ~~~~LdLs~~~Lt-sLP~~l~--~~L~~L~L~~N~Lt~-LP~----lp~~Lk~LdLs~N~Lts-LP~l--p~sL~~L~Ls 270 (788)
T PRK15387 202 GNAVLNVGESGLT-TLPDCLP--AHITTLVIPDNNLTS-LPA----LPPELRTLEVSGNQLTS-LPVL--PPGLLELSIF 270 (788)
T ss_pred CCcEEEcCCCCCC-cCCcchh--cCCCEEEccCCcCCC-CCC----CCCCCcEEEecCCccCc-ccCc--ccccceeecc
Confidence 3445666666665 3454443 366777777776653 332 22567777777776663 3322 3466777777
Q ss_pred CCccccCCCCCccccceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCc
Q 037822 223 SNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPR 302 (497)
Q Consensus 223 ~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~ 302 (497)
+|.+... |..+.+|+.|++++|++. .+|. .+++|+.|++++|.+.+. |.. ..+|+.|++++|.++ .+|.
T Consensus 271 ~N~L~~L-p~lp~~L~~L~Ls~N~Lt-~LP~----~p~~L~~LdLS~N~L~~L-p~l---p~~L~~L~Ls~N~L~-~LP~ 339 (788)
T PRK15387 271 SNPLTHL-PALPSGLCKLWIFGNQLT-SLPV----LPPGLQELSVSDNQLASL-PAL---PSELCKLWAYNNQLT-SLPT 339 (788)
T ss_pred CCchhhh-hhchhhcCEEECcCCccc-cccc----cccccceeECCCCccccC-CCC---cccccccccccCccc-cccc
Confidence 7766543 224456777777777766 4443 346677777777777642 221 245667777777776 3443
Q ss_pred ccccCCCCCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCC
Q 037822 303 LWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPS 382 (497)
Q Consensus 303 ~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~ 382 (497)
. .++|+.|++++|+++. +|.. .++|+.|++++|.+. .+|.. ..+|+.|++++|++. .+|.. +++
T Consensus 340 l---p~~Lq~LdLS~N~Ls~-LP~l---p~~L~~L~Ls~N~L~-~LP~l---~~~L~~LdLs~N~Lt-~LP~l----~s~ 403 (788)
T PRK15387 340 L---PSGLQELSVSDNQLAS-LPTL---PSELYKLWAYNNRLT-SLPAL---PSGLKELIVSGNRLT-SLPVL----PSE 403 (788)
T ss_pred c---ccccceEecCCCccCC-CCCC---Ccccceehhhccccc-cCccc---ccccceEEecCCccc-CCCCc----ccC
Confidence 1 2467777777777763 3322 346777777777776 34432 246777777777776 45532 456
Q ss_pred CCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCccccc
Q 037822 383 LSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGS 444 (497)
Q Consensus 383 L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~ 444 (497)
|+.|++++|.++ .+|.. ..+|+.|++++|+++ .+|.++.+++.|+.|++++|++...
T Consensus 404 L~~LdLS~N~Ls-sIP~l---~~~L~~L~Ls~NqLt-~LP~sl~~L~~L~~LdLs~N~Ls~~ 460 (788)
T PRK15387 404 LKELMVSGNRLT-SLPML---PSGLLSLSVYRNQLT-RLPESLIHLSSETTVNLEGNPLSER 460 (788)
T ss_pred CCEEEccCCcCC-CCCcc---hhhhhhhhhccCccc-ccChHHhhccCCCeEECCCCCCCch
Confidence 777777777776 35532 345677777777777 5677777777777777777777544
No 17
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.76 E-value=2.3e-18 Score=175.23 Aligned_cols=250 Identities=21% Similarity=0.327 Sum_probs=146.3
Q ss_pred CccEEEcccccccccCCccccccCCCEEEccCCccccCCCCCccccceEecccCcccccCChhhhcCCCCccEEEcccCc
Q 037822 192 TLDELDVAYNELSGSIPNSLGFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNS 271 (497)
Q Consensus 192 ~L~~L~l~~~~~~~~~~~~~~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~ 271 (497)
+...|+++++.++. +|..+ .+.+..+++++|.+.......+.+|+.|++++|.+. .+|..+ .+.|+.|++++|.
T Consensus 179 ~~~~L~L~~~~Lts-LP~~I-p~~L~~L~Ls~N~LtsLP~~l~~nL~~L~Ls~N~Lt-sLP~~l---~~~L~~L~Ls~N~ 252 (754)
T PRK15370 179 NKTELRLKILGLTT-IPACI-PEQITTLILDNNELKSLPENLQGNIKTLYANSNQLT-SIPATL---PDTIQEMELSINR 252 (754)
T ss_pred CceEEEeCCCCcCc-CCccc-ccCCcEEEecCCCCCcCChhhccCCCEEECCCCccc-cCChhh---hccccEEECcCCc
Confidence 46677777776663 34322 245677777777776554444457777777777766 455433 3457777777777
Q ss_pred ceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcc
Q 037822 272 LNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPS 351 (497)
Q Consensus 272 i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~ 351 (497)
+. ..|..+. .+|+.|++++|.+. .+|..+. ++|+.|++++|.++. .|..+ .++|+.|++++|.+. .+|..
T Consensus 253 L~-~LP~~l~--s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N~Lt~-LP~~l--p~sL~~L~Ls~N~Lt-~LP~~ 322 (754)
T PRK15370 253 IT-ELPERLP--SALQSLDLFHNKIS-CLPENLP--EELRYLSVYDNSIRT-LPAHL--PSGITHLNVQSNSLT-ALPET 322 (754)
T ss_pred cC-cCChhHh--CCCCEEECcCCccC-ccccccC--CCCcEEECCCCcccc-Ccccc--hhhHHHHHhcCCccc-cCCcc
Confidence 66 3344332 46777777777766 4554432 467777777777663 33322 235677777777765 34433
Q ss_pred cccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCC
Q 037822 352 LKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGM 431 (497)
Q Consensus 352 ~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 431 (497)
+ .++|+.|++++|.++ .+|..+ +++|+.|++++|+++ .+|..+ .+.|+.|++++|++. .+|..+. ..|
T Consensus 323 l--~~sL~~L~Ls~N~Lt-~LP~~l---~~sL~~L~Ls~N~L~-~LP~~l--p~~L~~LdLs~N~Lt-~LP~~l~--~sL 390 (754)
T PRK15370 323 L--PPGLKTLEAGENALT-SLPASL---PPELQVLDVSKNQIT-VLPETL--PPTITTLDVSRNALT-NLPENLP--AAL 390 (754)
T ss_pred c--cccceeccccCCccc-cCChhh---cCcccEEECCCCCCC-cCChhh--cCCcCEEECCCCcCC-CCCHhHH--HHH
Confidence 2 256777777777766 455443 356777777777766 455433 256777777777776 3444443 246
Q ss_pred cccCCCCCcccccceeeeeCccccccccccccCEEEccCCccc
Q 037822 432 KVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLS 474 (497)
Q Consensus 432 ~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~ 474 (497)
+.|++++|++... + ...+.+....+.+..|++.+|+++
T Consensus 391 ~~LdLs~N~L~~L-P----~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 391 QIMQASRNNLVRL-P----ESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred HHHhhccCCcccC-c----hhHHHHhhcCCCccEEEeeCCCcc
Confidence 6666666665422 1 112233344456666666666665
No 18
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.74 E-value=2.5e-19 Score=169.58 Aligned_cols=116 Identities=25% Similarity=0.312 Sum_probs=62.4
Q ss_pred ccCCCCCEEECccCcccccC----CcccccccCCcEEEeecceeeee----CCcccccCCCCCEEecCCCcCcccCChhH
Q 037822 305 SNISSLYILDMSNNSLSGEI----PESIGSLLSVRFLILCNNHISGE----VPPSLKNCSMMDSLDLGDNQLSGNIPAWI 376 (497)
Q Consensus 305 ~~~~~L~~L~l~~n~i~~~~----~~~l~~~~~L~~L~l~~~~~~~~----~~~~~~~~~~L~~L~l~~~~i~~~~~~~~ 376 (497)
..+++|+.|++++|.+++.. +..+...++|++|++++|.+.+. +...+..+++|++|++++|.+.+.....+
T Consensus 162 ~~~~~L~~L~l~~n~l~~~~~~~l~~~l~~~~~L~~L~L~~n~i~~~~~~~l~~~~~~~~~L~~L~ls~n~l~~~~~~~l 241 (319)
T cd00116 162 RANRDLKELNLANNGIGDAGIRALAEGLKANCNLEVLDLNNNGLTDEGASALAETLASLKSLEVLNLGDNNLTDAGAAAL 241 (319)
T ss_pred HhCCCcCEEECcCCCCchHHHHHHHHHHHhCCCCCEEeccCCccChHHHHHHHHHhcccCCCCEEecCCCcCchHHHHHH
Confidence 33444555555555444211 11223334555555555554321 22334556677777777777665333333
Q ss_pred hhhC----CCCCEEEccCccccc----CCCcccCCCCCCCEEEccCCcCcCC
Q 037822 377 GESM----PSLSILRLRSNYFNG----TIPPELCKLPALHILDLSHNNLSGI 420 (497)
Q Consensus 377 ~~~~----~~L~~L~l~~n~~~~----~~~~~l~~l~~L~~L~l~~n~i~~~ 420 (497)
...+ +.|+.|++++|.+++ .+...+..+++|+++++++|.++..
T Consensus 242 ~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~~~~~L~~l~l~~N~l~~~ 293 (319)
T cd00116 242 ASALLSPNISLLTLSLSCNDITDDGAKDLAEVLAEKESLLELDLRGNKFGEE 293 (319)
T ss_pred HHHHhccCCCceEEEccCCCCCcHHHHHHHHHHhcCCCccEEECCCCCCcHH
Confidence 3332 577777777777652 1223445556777777777777744
No 19
>PRK15370 E3 ubiquitin-protein ligase SlrP; Provisional
Probab=99.73 E-value=1.2e-17 Score=170.00 Aligned_cols=204 Identities=22% Similarity=0.348 Sum_probs=109.7
Q ss_pred CCCEEEccCCccccCCCCCccccceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecc
Q 037822 215 FPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNN 294 (497)
Q Consensus 215 ~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n 294 (497)
+|+.|++++|.+.......+..|+.|++++|.+. .+|..+ ...|+.|++++|++. ..|..+. ++|+.|++++|
T Consensus 221 nL~~L~Ls~N~LtsLP~~l~~~L~~L~Ls~N~L~-~LP~~l---~s~L~~L~Ls~N~L~-~LP~~l~--~sL~~L~Ls~N 293 (754)
T PRK15370 221 NIKTLYANSNQLTSIPATLPDTIQEMELSINRIT-ELPERL---PSALQSLDLFHNKIS-CLPENLP--EELRYLSVYDN 293 (754)
T ss_pred CCCEEECCCCccccCChhhhccccEEECcCCccC-cCChhH---hCCCCEEECcCCccC-ccccccC--CCCcEEECCCC
Confidence 4444444444444322222335666666666655 444443 235666666666665 2333332 45666666666
Q ss_pred eeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCCh
Q 037822 295 NLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPA 374 (497)
Q Consensus 295 ~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~ 374 (497)
.++ .+|..+. ++|+.|++++|.++. .|..+ .++|+.|++++|.++ .+|..+ +++|+.|++++|++. .+|.
T Consensus 294 ~Lt-~LP~~lp--~sL~~L~Ls~N~Lt~-LP~~l--~~sL~~L~Ls~N~Lt-~LP~~l--~~sL~~L~Ls~N~L~-~LP~ 363 (754)
T PRK15370 294 SIR-TLPAHLP--SGITHLNVQSNSLTA-LPETL--PPGLKTLEAGENALT-SLPASL--PPELQVLDVSKNQIT-VLPE 363 (754)
T ss_pred ccc-cCcccch--hhHHHHHhcCCcccc-CCccc--cccceeccccCCccc-cCChhh--cCcccEEECCCCCCC-cCCh
Confidence 665 3443322 356666666666652 33222 246666666666665 344433 256677777776665 5554
Q ss_pred hHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccc----cCCCCCcccCCCCCccc
Q 037822 375 WIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCV----GNFSGMKVEPPDSVKYE 442 (497)
Q Consensus 375 ~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l----~~l~~L~~L~l~~~~~~ 442 (497)
.+ +++|+.|++++|+++ .+|..+. ..|+.|++++|++. .+|..+ ..++.+..+++.+|++.
T Consensus 364 ~l---p~~L~~LdLs~N~Lt-~LP~~l~--~sL~~LdLs~N~L~-~LP~sl~~~~~~~~~l~~L~L~~Npls 428 (754)
T PRK15370 364 TL---PPTITTLDVSRNALT-NLPENLP--AALQIMQASRNNLV-RLPESLPHFRGEGPQPTRIIVEYNPFS 428 (754)
T ss_pred hh---cCCcCEEECCCCcCC-CCCHhHH--HHHHHHhhccCCcc-cCchhHHHHhhcCCCccEEEeeCCCcc
Confidence 33 346667777777666 4444332 25666667777666 444433 23355666666666653
No 20
>cd00116 LRR_RI Leucine-rich repeats (LRRs), ribonuclease inhibitor (RI)-like subfamily. LRRs are 20-29 residue sequence motifs present in many proteins that participate in protein-protein interactions and have different functions and cellular locations. LRRs correspond to structural units consisting of a beta strand (LxxLxLxxN/CxL conserved pattern) and an alpha helix. This alignment contains 12 strands corresponding to 11 full repeats, consistent with the extent observed in the subfamily acting as Ran GTPase Activating Proteins (RanGAP1).
Probab=99.73 E-value=1.8e-19 Score=170.55 Aligned_cols=104 Identities=26% Similarity=0.244 Sum_probs=64.4
Q ss_pred EEEcCCCCCc-ccCCccccCCCCCCEEECCCCcccc----cCCccccCCCCCCEEECcCCcCcc------cCCccCCCCC
Q 037822 21 KLELGFNQLN-GDLPSSLGYLKNLRYLELWHNSFVG----SIPPSIGNLTFLKELYLSSNQMNG------KFPENFGQLS 89 (497)
Q Consensus 21 ~L~l~~~~i~-~~~~~~~~~l~~L~~L~l~~~~l~~----~~~~~l~~l~~L~~L~l~~n~~~~------~~~~~~~~l~ 89 (497)
.|+|.++.+. ......+..+.+|++|+++++.++. .++..+...+.|++++++++.+.. ..+..+.+++
T Consensus 2 ~l~L~~~~l~~~~~~~~~~~l~~L~~l~l~~~~l~~~~~~~i~~~l~~~~~l~~l~l~~~~~~~~~~~~~~~~~~l~~~~ 81 (319)
T cd00116 2 QLSLKGELLKTERATELLPKLLCLQVLRLEGNTLGEEAAKALASALRPQPSLKELCLSLNETGRIPRGLQSLLQGLTKGC 81 (319)
T ss_pred ccccccCcccccchHHHHHHHhhccEEeecCCCCcHHHHHHHHHHHhhCCCceEEeccccccCCcchHHHHHHHHHHhcC
Confidence 3566666665 3334456677778888888887743 245556677778888888877651 2233456677
Q ss_pred CCCEEEcCCCccccccChhhhhcCCC---CceEeccCcc
Q 037822 90 AVEVLDLSENQWEGIITETHFRNLSN---LKELALNKQS 125 (497)
Q Consensus 90 ~L~~L~l~~n~l~~~~~~~~~~~l~~---L~~L~l~~~~ 125 (497)
+|+.|++++|.+.+..+. .+..+.. |++|++++|.
T Consensus 82 ~L~~L~l~~~~~~~~~~~-~~~~l~~~~~L~~L~ls~~~ 119 (319)
T cd00116 82 GLQELDLSDNALGPDGCG-VLESLLRSSSLQELKLNNNG 119 (319)
T ss_pred ceeEEEccCCCCChhHHH-HHHHHhccCcccEEEeeCCc
Confidence 888888888777542222 3333333 6666665543
No 21
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.62 E-value=7.8e-18 Score=133.31 Aligned_cols=171 Identities=27% Similarity=0.380 Sum_probs=139.6
Q ss_pred ccCCCCCCCCCCccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCC
Q 037822 7 IDGLSECTNSSLLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFG 86 (497)
Q Consensus 7 l~~l~~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~ 86 (497)
+..+.++-.+++++.|.+|.|+++ ..|..++.+.+|++|++++|++. .+|..++.+++|+.|++.-|++. ..|..|+
T Consensus 23 f~~~~gLf~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfg 99 (264)
T KOG0617|consen 23 FEELPGLFNMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFG 99 (264)
T ss_pred HhhcccccchhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccC
Confidence 344445555568899999999999 55667999999999999999998 78999999999999999999987 8899999
Q ss_pred CCCCCCEEEcCCCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCCCCCCccccCCC
Q 037822 87 QLSAVEVLDLSENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGPKFPTWLRNQT 166 (497)
Q Consensus 87 ~l~~L~~L~l~~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~~~~~~l~~l~ 166 (497)
.++-|++||+.+|.+.+......|-.+..|+.|.++. .....++..++++++|+.|.+.++++. ..|..++.+.
T Consensus 100 s~p~levldltynnl~e~~lpgnff~m~tlralyl~d-----ndfe~lp~dvg~lt~lqil~lrdndll-~lpkeig~lt 173 (264)
T KOG0617|consen 100 SFPALEVLDLTYNNLNENSLPGNFFYMTTLRALYLGD-----NDFEILPPDVGKLTNLQILSLRDNDLL-SLPKEIGDLT 173 (264)
T ss_pred CCchhhhhhccccccccccCCcchhHHHHHHHHHhcC-----CCcccCChhhhhhcceeEEeeccCchh-hCcHHHHHHH
Confidence 9999999999999987544334677788888888887 455667888888888888888888765 4677788888
Q ss_pred CccEEEeeccccccccCchhh
Q 037822 167 ELTTLVLNNVRISDTIPDWFW 187 (497)
Q Consensus 167 ~L~~L~l~~~~~~~~~~~~~~ 187 (497)
.|++|.+.+|+++ ..|..++
T Consensus 174 ~lrelhiqgnrl~-vlppel~ 193 (264)
T KOG0617|consen 174 RLRELHIQGNRLT-VLPPELA 193 (264)
T ss_pred HHHHHhcccceee-ecChhhh
Confidence 8888888888876 4554444
No 22
>KOG0617 consensus Ras suppressor protein (contains leucine-rich repeats) [Signal transduction mechanisms]
Probab=99.61 E-value=7e-18 Score=133.59 Aligned_cols=183 Identities=28% Similarity=0.481 Sum_probs=134.8
Q ss_pred CCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEE
Q 037822 258 KIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFL 337 (497)
Q Consensus 258 ~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L 337 (497)
.+..++.|.+++|+++ ..|..++.+.+|+.|++++|+++ ..|..++.+++|+.|+++-|++. ..|..|+++|.|+.|
T Consensus 31 ~~s~ITrLtLSHNKl~-~vppnia~l~nlevln~~nnqie-~lp~~issl~klr~lnvgmnrl~-~lprgfgs~p~levl 107 (264)
T KOG0617|consen 31 NMSNITRLTLSHNKLT-VVPPNIAELKNLEVLNLSNNQIE-ELPTSISSLPKLRILNVGMNRLN-ILPRGFGSFPALEVL 107 (264)
T ss_pred chhhhhhhhcccCcee-ecCCcHHHhhhhhhhhcccchhh-hcChhhhhchhhhheecchhhhh-cCccccCCCchhhhh
Confidence 4566777778888877 45556777888888888888877 67777888888888888888776 777788888888888
Q ss_pred Eeecceeee-eCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCc
Q 037822 338 ILCNNHISG-EVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNN 416 (497)
Q Consensus 338 ~l~~~~~~~-~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~ 416 (497)
|+.+|.+.+ ..|..|.++..|+.|.+++|++. .+|..+++ +++|+.|.+++|.+. ..|..++.++.|++|++.+|.
T Consensus 108 dltynnl~e~~lpgnff~m~tlralyl~dndfe-~lp~dvg~-lt~lqil~lrdndll-~lpkeig~lt~lrelhiqgnr 184 (264)
T KOG0617|consen 108 DLTYNNLNENSLPGNFFYMTTLRALYLGDNDFE-ILPPDVGK-LTNLQILSLRDNDLL-SLPKEIGDLTRLRELHIQGNR 184 (264)
T ss_pred hccccccccccCCcchhHHHHHHHHHhcCCCcc-cCChhhhh-hcceeEEeeccCchh-hCcHHHHHHHHHHHHhcccce
Confidence 888877753 35667777788888888888886 77777776 888888888888877 677788888888888888888
Q ss_pred CcCCCCccccCCC---CCcccCCCCCccccccee
Q 037822 417 LSGIIPPCVGNFS---GMKVEPPDSVKYEGSLQV 447 (497)
Q Consensus 417 i~~~~~~~l~~l~---~L~~L~l~~~~~~~~~~~ 447 (497)
++ .+|..++++. +-++..+.+|++...+..
T Consensus 185 l~-vlppel~~l~l~~~k~v~r~E~NPwv~pIae 217 (264)
T KOG0617|consen 185 LT-VLPPELANLDLVGNKQVMRMEENPWVNPIAE 217 (264)
T ss_pred ee-ecChhhhhhhhhhhHHHHhhhhCCCCChHHH
Confidence 88 4555555443 223345566666554443
No 23
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=99.29 E-value=4.1e-13 Score=116.42 Aligned_cols=205 Identities=24% Similarity=0.194 Sum_probs=118.6
Q ss_pred cccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEEEeecc-eeeeeCCcccc
Q 037822 275 SVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNN-HISGEVPPSLK 353 (497)
Q Consensus 275 ~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~-~~~~~~~~~~~ 353 (497)
..+..+..+++|+++.++.|.-. -+-.....-|.|+.+.+.+..+.. ...+....++....-..- -..|.....+.
T Consensus 205 ~l~f~l~~f~~l~~~~~s~~~~~-~i~~~~~~kptl~t~~v~~s~~~~--~~~l~pe~~~~D~~~~E~~t~~G~~~~~~d 281 (490)
T KOG1259|consen 205 RLSFNLNAFRNLKTLKFSALSTE-NIVDIELLKPTLQTICVHNTTIQD--VPSLLPETILADPSGSEPSTSNGSALVSAD 281 (490)
T ss_pred ccccchHHhhhhheeeeeccchh-heeceeecCchhheeeeecccccc--cccccchhhhcCccCCCCCccCCceEEecc
Confidence 34455556677777777776643 122222233567777666654431 111211112211111110 01112223344
Q ss_pred cCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcc
Q 037822 354 NCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKV 433 (497)
Q Consensus 354 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~ 433 (497)
.|..|+++|+++|.|+ .+.+..-- .|.++.|+++.|.++ .+ ..+..+++|++||+++|.++ ...++-.++-+.|+
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL-~Pkir~L~lS~N~i~-~v-~nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKt 356 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKL-APKLRRLILSQNRIR-TV-QNLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKT 356 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhh-ccceeEEecccccee-ee-hhhhhcccceEeecccchhH-hhhhhHhhhcCEee
Confidence 5667777777777776 55554432 677777777777776 22 23677777777777777776 34445556666677
Q ss_pred cCCCCCcccccceeeeeCccccccccccccCEEEccCCcccccC-ChhhhccCCCCeEECCCCCC
Q 037822 434 EPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGEM-PVELTRLIHLGTLNLSRNHL 497 (497)
Q Consensus 434 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~-~~~l~~l~~L~~l~l~~n~i 497 (497)
|.+.+|.+.+.. .++.+-+|..||+++|.|.+.. ..+++++|.|+++.+.+|||
T Consensus 357 L~La~N~iE~LS----------GL~KLYSLvnLDl~~N~Ie~ldeV~~IG~LPCLE~l~L~~NPl 411 (490)
T KOG1259|consen 357 LKLAQNKIETLS----------GLRKLYSLVNLDLSSNQIEELDEVNHIGNLPCLETLRLTGNPL 411 (490)
T ss_pred eehhhhhHhhhh----------hhHhhhhheeccccccchhhHHHhcccccccHHHHHhhcCCCc
Confidence 777777663321 1245567777888888886542 45688888888888888875
No 24
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.28 E-value=1.2e-13 Score=122.36 Aligned_cols=136 Identities=24% Similarity=0.324 Sum_probs=79.6
Q ss_pred cCCccEEEeecceeec----ccCcccccCCCCCEEECccCcccccC----CcccccccCCcEEEeecceeeee----CCc
Q 037822 283 LQQLLTLVISNNNLSG----EIPRLWSNISSLYILDMSNNSLSGEI----PESIGSLLSVRFLILCNNHISGE----VPP 350 (497)
Q Consensus 283 l~~L~~L~l~~n~~~~----~~~~~~~~~~~L~~L~l~~n~i~~~~----~~~l~~~~~L~~L~l~~~~~~~~----~~~ 350 (497)
.+.|+++....|++.. .+...|...+.|+++.+..|.|.... ..++..+++|++|++.+|.++.. +..
T Consensus 156 ~~~Lrv~i~~rNrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~Lak 235 (382)
T KOG1909|consen 156 KPKLRVFICGRNRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAK 235 (382)
T ss_pred CcceEEEEeeccccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHH
Confidence 4556666666665542 12234455566666666666664222 23456667777777777766422 334
Q ss_pred ccccCCCCCEEecCCCcCcccCChhH----hhhCCCCCEEEccCcccccC----CCcccCCCCCCCEEEccCCcCc
Q 037822 351 SLKNCSMMDSLDLGDNQLSGNIPAWI----GESMPSLSILRLRSNYFNGT----IPPELCKLPALHILDLSHNNLS 418 (497)
Q Consensus 351 ~~~~~~~L~~L~l~~~~i~~~~~~~~----~~~~~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L~l~~n~i~ 418 (497)
++..|++|+.+++++|.+.......+ ....|+|+.+.+.+|.++.. +..++...+.|+.|+|++|.+.
T Consensus 236 aL~s~~~L~El~l~dcll~~~Ga~a~~~al~~~~p~L~vl~l~gNeIt~da~~~la~~~~ek~dL~kLnLngN~l~ 311 (382)
T KOG1909|consen 236 ALSSWPHLRELNLGDCLLENEGAIAFVDALKESAPSLEVLELAGNEITRDAALALAACMAEKPDLEKLNLNGNRLG 311 (382)
T ss_pred HhcccchheeecccccccccccHHHHHHHHhccCCCCceeccCcchhHHHHHHHHHHHHhcchhhHHhcCCccccc
Confidence 55667777777777777664443333 23356777777777777641 2223444677777777777773
No 25
>KOG1909 consensus Ran GTPase-activating protein [RNA processing and modification; Nuclear structure; Signal transduction mechanisms]
Probab=99.26 E-value=3.8e-13 Score=119.14 Aligned_cols=143 Identities=22% Similarity=0.243 Sum_probs=87.3
Q ss_pred cccCcCCccEEEeecceeecccCcc----cccCCCCCEEECccCcccccCC-------------cccccccCCcEEEeec
Q 037822 279 SICNLQQLLTLVISNNNLSGEIPRL----WSNISSLYILDMSNNSLSGEIP-------------ESIGSLLSVRFLILCN 341 (497)
Q Consensus 279 ~l~~l~~L~~L~l~~n~~~~~~~~~----~~~~~~L~~L~l~~n~i~~~~~-------------~~l~~~~~L~~L~l~~ 341 (497)
++..++.|+++++|+|-+....+.. ++++..|++|.+.+|.+....- ....+.+.|+++...+
T Consensus 87 aL~~~~~L~~ldLSDNA~G~~g~~~l~~ll~s~~~L~eL~L~N~Glg~~ag~~l~~al~~l~~~kk~~~~~~Lrv~i~~r 166 (382)
T KOG1909|consen 87 ALLGCPKLQKLDLSDNAFGPKGIRGLEELLSSCTDLEELYLNNCGLGPEAGGRLGRALFELAVNKKAASKPKLRVFICGR 166 (382)
T ss_pred HHhcCCceeEeeccccccCccchHHHHHHHHhccCHHHHhhhcCCCChhHHHHHHHHHHHHHHHhccCCCcceEEEEeec
Confidence 3455667888888887766444433 3456778888888887652211 1223456777777777
Q ss_pred ceeeee----CCcccccCCCCCEEecCCCcCcccCC---hhHhhhCCCCCEEEccCcccccC----CCcccCCCCCCCEE
Q 037822 342 NHISGE----VPPSLKNCSMMDSLDLGDNQLSGNIP---AWIGESMPSLSILRLRSNYFNGT----IPPELCKLPALHIL 410 (497)
Q Consensus 342 ~~~~~~----~~~~~~~~~~L~~L~l~~~~i~~~~~---~~~~~~~~~L~~L~l~~n~~~~~----~~~~l~~l~~L~~L 410 (497)
|.+... +...|..++.|+.+++..|.|.-... ...+..+++|+.||+.+|-++.. +...+..+++|+++
T Consensus 167 Nrlen~ga~~~A~~~~~~~~leevr~~qN~I~~eG~~al~eal~~~~~LevLdl~DNtft~egs~~LakaL~s~~~L~El 246 (382)
T KOG1909|consen 167 NRLENGGATALAEAFQSHPTLEEVRLSQNGIRPEGVTALAEALEHCPHLEVLDLRDNTFTLEGSVALAKALSSWPHLREL 246 (382)
T ss_pred cccccccHHHHHHHHHhccccceEEEecccccCchhHHHHHHHHhCCcceeeecccchhhhHHHHHHHHHhcccchheee
Confidence 776422 22345666777777777776653222 12233477777777777776632 23445666777777
Q ss_pred EccCCcCcCCC
Q 037822 411 DLSHNNLSGII 421 (497)
Q Consensus 411 ~l~~n~i~~~~ 421 (497)
++++|.+....
T Consensus 247 ~l~dcll~~~G 257 (382)
T KOG1909|consen 247 NLGDCLLENEG 257 (382)
T ss_pred ccccccccccc
Confidence 77777776553
No 26
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.22 E-value=4.2e-13 Score=126.08 Aligned_cols=170 Identities=29% Similarity=0.467 Sum_probs=118.8
Q ss_pred CCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEcc
Q 037822 310 LYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLR 389 (497)
Q Consensus 310 L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~ 389 (497)
-...+++.|++. +.|..+..+..|+.+.++.|.+. .+|..+..+..|+.++++.|++. ..|..++. --|+.|-++
T Consensus 77 t~~aDlsrNR~~-elp~~~~~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~--lpLkvli~s 151 (722)
T KOG0532|consen 77 TVFADLSRNRFS-ELPEEACAFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCD--LPLKVLIVS 151 (722)
T ss_pred hhhhhccccccc-cCchHHHHHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhc--CcceeEEEe
Confidence 344556666665 55656666666666666666665 56666677777777777777776 66666653 346777777
Q ss_pred CcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEcc
Q 037822 390 SNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLS 469 (497)
Q Consensus 390 ~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~ 469 (497)
+|+++ .+|..++....|..|+.+.|.+. .+|..+..+.+|+.|.++.|.+....+.. . .=.|..||+|
T Consensus 152 NNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~~lp~El---------~-~LpLi~lDfS 219 (722)
T KOG0532|consen 152 NNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLEDLPEEL---------C-SLPLIRLDFS 219 (722)
T ss_pred cCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhhhCCHHH---------h-CCceeeeecc
Confidence 77776 56666777777777777777777 56667777777777777777775544432 2 2346778999
Q ss_pred CCcccccCChhhhccCCCCeEECCCCCC
Q 037822 470 SNNLSGEMPVELTRLIHLGTLNLSRNHL 497 (497)
Q Consensus 470 ~n~~~~~~~~~l~~l~~L~~l~l~~n~i 497 (497)
.|+++ .+|..|.+|+.|++|.|.+||+
T Consensus 220 cNkis-~iPv~fr~m~~Lq~l~LenNPL 246 (722)
T KOG0532|consen 220 CNKIS-YLPVDFRKMRHLQVLQLENNPL 246 (722)
T ss_pred cCcee-ecchhhhhhhhheeeeeccCCC
Confidence 99998 7888899999999999988885
No 27
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.21 E-value=2.4e-12 Score=117.36 Aligned_cols=141 Identities=25% Similarity=0.185 Sum_probs=69.3
Q ss_pred cCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCC-CccccCCCCCc
Q 037822 354 NCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGII-PPCVGNFSGMK 432 (497)
Q Consensus 354 ~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~-~~~l~~l~~L~ 432 (497)
.+++|+.|.+++|.++-.-...+...+|+|+.|++.+|...........-+..|++|+|++|++.+.. ....+.++.|.
T Consensus 195 ~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdLs~N~li~~~~~~~~~~l~~L~ 274 (505)
T KOG3207|consen 195 LLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDLSNNNLIDFDQGYKVGTLPGLN 274 (505)
T ss_pred hhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccccCCcccccccccccccccchh
Confidence 34555555565555543223333334566666666655322122222333445666666666554221 12345555666
Q ss_pred ccCCCCCcccccceeeeeCccccccccccccCEEEccCCccccc-CChhhhccCCCCeEECCCCC
Q 037822 433 VEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGE-MPVELTRLIHLGTLNLSRNH 496 (497)
Q Consensus 433 ~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~-~~~~l~~l~~L~~l~l~~n~ 496 (497)
.|+++.+.+.+.-... +....-...+++|++|+++.|.+.+- ....+..+++|+.+.+..|+
T Consensus 275 ~Lnls~tgi~si~~~d--~~s~~kt~~f~kL~~L~i~~N~I~~w~sl~~l~~l~nlk~l~~~~n~ 337 (505)
T KOG3207|consen 275 QLNLSSTGIASIAEPD--VESLDKTHTFPKLEYLNISENNIRDWRSLNHLRTLENLKHLRITLNY 337 (505)
T ss_pred hhhccccCcchhcCCC--ccchhhhcccccceeeecccCccccccccchhhccchhhhhhccccc
Confidence 6666555553322111 11111124567777788887777421 12345556666666665554
No 28
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.20 E-value=1.8e-11 Score=119.25 Aligned_cols=195 Identities=30% Similarity=0.457 Sum_probs=102.8
Q ss_pred EEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCC-CCCEEECccCcccccCCcccccccCCcEEEeecc
Q 037822 264 DLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNIS-SLYILDMSNNSLSGEIPESIGSLLSVRFLILCNN 342 (497)
Q Consensus 264 ~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~-~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~ 342 (497)
.++...+.+. .....+..++.++.+.+.+|.++ .++....... +|+.|++++|.+. ..+..+..+++|+.|++++|
T Consensus 97 ~l~~~~~~~~-~~~~~~~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~N 173 (394)
T COG4886 97 SLDLNLNRLR-SNISELLELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSFN 173 (394)
T ss_pred eeeccccccc-cCchhhhcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCCc
Confidence 4555555542 11222333456666666666665 4444444443 6666666666665 33344566666666666666
Q ss_pred eeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCC
Q 037822 343 HISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIP 422 (497)
Q Consensus 343 ~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~ 422 (497)
++. ..+......+.|+.|++++|++. .+|..+.. +..|+++.+++|++. ..+..+..+.++..+.+.+|++.. .+
T Consensus 174 ~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~-~~~L~~l~~~~N~~~-~~~~~~~~~~~l~~l~l~~n~~~~-~~ 248 (394)
T COG4886 174 DLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIEL-LSALEELDLSNNSII-ELLSSLSNLKNLSGLELSNNKLED-LP 248 (394)
T ss_pred hhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhh-hhhhhhhhhcCCcce-ecchhhhhcccccccccCCceeee-cc
Confidence 665 34433335566666666666665 55544321 444666666666433 334445556666666666666552 24
Q ss_pred ccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEccCCccccc
Q 037822 423 PCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGE 476 (497)
Q Consensus 423 ~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~ 476 (497)
..+..++.++.|++++|.+..... ++....++.|++++|.++..
T Consensus 249 ~~~~~l~~l~~L~~s~n~i~~i~~----------~~~~~~l~~L~~s~n~~~~~ 292 (394)
T COG4886 249 ESIGNLSNLETLDLSNNQISSISS----------LGSLTNLRELDLSGNSLSNA 292 (394)
T ss_pred chhccccccceecccccccccccc----------ccccCccCEEeccCcccccc
Confidence 445555555555555555432211 23344555555555555433
No 29
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.19 E-value=3.9e-12 Score=105.80 Aligned_cols=102 Identities=28% Similarity=0.361 Sum_probs=29.9
Q ss_pred CccEEEcCCCCCcccCCcccc-CCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccC-CCCCCCCEEE
Q 037822 18 LLEKLELGFNQLNGDLPSSLG-YLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENF-GQLSAVEVLD 95 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~-~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~-~~l~~L~~L~ 95 (497)
++++|++.+|+|+.+ +.++ .+.+|++|++++|.+... +.+..+++|++|++++|.++. +...+ ..+++|++|+
T Consensus 20 ~~~~L~L~~n~I~~I--e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~~-i~~~l~~~lp~L~~L~ 94 (175)
T PF14580_consen 20 KLRELNLRGNQISTI--ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRISS-ISEGLDKNLPNLQELY 94 (175)
T ss_dssp ------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS---S--CHHHHHH-TT--EEE
T ss_pred ccccccccccccccc--cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCCc-cccchHHhCCcCCEEE
Confidence 577777777777633 2354 466777777777777643 346667777777777777763 32233 3467777777
Q ss_pred cCCCccccccChhhhhcCCCCceEeccCc
Q 037822 96 LSENQWEGIITETHFRNLSNLKELALNKQ 124 (497)
Q Consensus 96 l~~n~l~~~~~~~~~~~l~~L~~L~l~~~ 124 (497)
+++|+|.+.-.-..+..+++|+.|++.+|
T Consensus 95 L~~N~I~~l~~l~~L~~l~~L~~L~L~~N 123 (175)
T PF14580_consen 95 LSNNKISDLNELEPLSSLPKLRVLSLEGN 123 (175)
T ss_dssp -TTS---SCCCCGGGGG-TT--EEE-TT-
T ss_pred CcCCcCCChHHhHHHHcCCCcceeeccCC
Confidence 77777665322234555555555555553
No 30
>PF14580 LRR_9: Leucine-rich repeat; PDB: 2JE1_D 2JE0_A 2JQD_A.
Probab=99.14 E-value=4.8e-11 Score=99.32 Aligned_cols=109 Identities=29% Similarity=0.416 Sum_probs=36.1
Q ss_pred CCCCCEEECccCcccccCCcccc-cccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCE
Q 037822 307 ISSLYILDMSNNSLSGEIPESIG-SLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSI 385 (497)
Q Consensus 307 ~~~L~~L~l~~n~i~~~~~~~l~-~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~ 385 (497)
+..+++|++.+|.|+. + +.++ .+.+|+.|++++|.+... +.+..++.|++|++++|.++ .+...+...+++|+.
T Consensus 18 ~~~~~~L~L~~n~I~~-I-e~L~~~l~~L~~L~Ls~N~I~~l--~~l~~L~~L~~L~L~~N~I~-~i~~~l~~~lp~L~~ 92 (175)
T PF14580_consen 18 PVKLRELNLRGNQIST-I-ENLGATLDKLEVLDLSNNQITKL--EGLPGLPRLKTLDLSNNRIS-SISEGLDKNLPNLQE 92 (175)
T ss_dssp --------------------S--TT-TT--EEE-TTS--S----TT----TT--EEE--SS----S-CHHHHHH-TT--E
T ss_pred cccccccccccccccc-c-cchhhhhcCCCEEECCCCCCccc--cCccChhhhhhcccCCCCCC-ccccchHHhCCcCCE
Confidence 4456666777766652 2 2343 356677777777777522 34666777777777777776 555444444777888
Q ss_pred EEccCcccccC-CCcccCCCCCCCEEEccCCcCcCC
Q 037822 386 LRLRSNYFNGT-IPPELCKLPALHILDLSHNNLSGI 420 (497)
Q Consensus 386 L~l~~n~~~~~-~~~~l~~l~~L~~L~l~~n~i~~~ 420 (497)
|++++|++... ....+..+++|+.|++.+|++...
T Consensus 93 L~L~~N~I~~l~~l~~L~~l~~L~~L~L~~NPv~~~ 128 (175)
T PF14580_consen 93 LYLSNNKISDLNELEPLSSLPKLRVLSLEGNPVCEK 128 (175)
T ss_dssp EE-TTS---SCCCCGGGGG-TT--EEE-TT-GGGGS
T ss_pred EECcCCcCCChHHhHHHHcCCCcceeeccCCcccch
Confidence 88887777642 124566778888888888887633
No 31
>KOG0532 consensus Leucine-rich repeat (LRR) protein, contains calponin homology domain [Cytoskeleton]
Probab=99.11 E-value=1.6e-12 Score=122.24 Aligned_cols=193 Identities=27% Similarity=0.425 Sum_probs=164.8
Q ss_pred ccceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEEC
Q 037822 236 NVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDM 315 (497)
Q Consensus 236 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l 315 (497)
.....+++.|++. .+|..+. .+..|+.+.+..|.+- ..|..++++..|.+++++.|++. ..|..+..++ |+.|.+
T Consensus 76 dt~~aDlsrNR~~-elp~~~~-~f~~Le~liLy~n~~r-~ip~~i~~L~~lt~l~ls~NqlS-~lp~~lC~lp-Lkvli~ 150 (722)
T KOG0532|consen 76 DTVFADLSRNRFS-ELPEEAC-AFVSLESLILYHNCIR-TIPEAICNLEALTFLDLSSNQLS-HLPDGLCDLP-LKVLIV 150 (722)
T ss_pred chhhhhccccccc-cCchHHH-HHHHHHHHHHHhccce-ecchhhhhhhHHHHhhhccchhh-cCChhhhcCc-ceeEEE
Confidence 4566788889887 7777763 6788999999999887 67888999999999999999998 7887777775 899999
Q ss_pred ccCcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCccccc
Q 037822 316 SNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNG 395 (497)
Q Consensus 316 ~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~ 395 (497)
++|+++ ..|..++..+.|..|+.+.|.+. ..|.-+.++.+|+.|.+..|.+. .+|..++ .-.|.+||+++|++.
T Consensus 151 sNNkl~-~lp~~ig~~~tl~~ld~s~nei~-slpsql~~l~slr~l~vrRn~l~-~lp~El~--~LpLi~lDfScNkis- 224 (722)
T KOG0532|consen 151 SNNKLT-SLPEEIGLLPTLAHLDVSKNEIQ-SLPSQLGYLTSLRDLNVRRNHLE-DLPEELC--SLPLIRLDFSCNKIS- 224 (722)
T ss_pred ecCccc-cCCcccccchhHHHhhhhhhhhh-hchHHhhhHHHHHHHHHhhhhhh-hCCHHHh--CCceeeeecccCcee-
Confidence 999998 77878888899999999999997 77888999999999999999998 7888776 457999999999998
Q ss_pred CCCcccCCCCCCCEEEccCCcCcCCCCccc---cCCCCCcccCCCCCc
Q 037822 396 TIPPELCKLPALHILDLSHNNLSGIIPPCV---GNFSGMKVEPPDSVK 440 (497)
Q Consensus 396 ~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l---~~l~~L~~L~l~~~~ 440 (497)
.+|-.|.++.+|++|-|.+|++. ..|-++ +...-.|+|+...|+
T Consensus 225 ~iPv~fr~m~~Lq~l~LenNPLq-SPPAqIC~kGkVHIFKyL~~qA~q 271 (722)
T KOG0532|consen 225 YLPVDFRKMRHLQVLQLENNPLQ-SPPAQICEKGKVHIFKYLSTQACQ 271 (722)
T ss_pred ecchhhhhhhhheeeeeccCCCC-CChHHHHhccceeeeeeecchhcc
Confidence 78999999999999999999998 555444 455667888888885
No 32
>KOG3207 consensus Beta-tubulin folding cofactor E [Posttranslational modification, protein turnover, chaperones]
Probab=99.08 E-value=2e-11 Score=111.46 Aligned_cols=191 Identities=19% Similarity=0.138 Sum_probs=89.4
Q ss_pred ccCCCCCCccccEEEccCCcCCCCCC-ccccCCCCccEEEeecccccccc-CchhhhcccCccEEEcccccccccCCccc
Q 037822 134 ISSHWIPPFKLTFINIRSCQLGPKFP-TWLRNQTELTTLVLNNVRISDTI-PDWFWQLDLTLDELDVAYNELSGSIPNSL 211 (497)
Q Consensus 134 ~~~~~~~~~~L~~l~l~~~~~~~~~~-~~l~~l~~L~~L~l~~~~~~~~~-~~~~~~~~~~L~~L~l~~~~~~~~~~~~~ 211 (497)
+.+.-.+..+|+.+.|.+++...... +....|++++.||++.|-+..-. ...++...++|+.|+++.|.+........
T Consensus 113 i~akQsn~kkL~~IsLdn~~V~~~~~~~~~k~~~~v~~LdLS~NL~~nw~~v~~i~eqLp~Le~LNls~Nrl~~~~~s~~ 192 (505)
T KOG3207|consen 113 IAAKQSNLKKLREISLDNYRVEDAGIEEYSKILPNVRDLDLSRNLFHNWFPVLKIAEQLPSLENLNLSSNRLSNFISSNT 192 (505)
T ss_pred HHHHhhhHHhhhheeecCccccccchhhhhhhCCcceeecchhhhHHhHHHHHHHHHhcccchhcccccccccCCccccc
Confidence 33444555667777777766543221 24456677777777776654211 11233333566666666665542111111
Q ss_pred cccCCCEEEccCCccccCCCCCccccceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEe
Q 037822 212 GFRFPATVDLSSNSFEGPLPLWSFNVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVI 291 (497)
Q Consensus 212 ~~~~l~~l~l~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l 291 (497)
...++.++.|.++.|.++-.--..+...+|.++.|++..|...........-+..|++|++
T Consensus 193 -------------------~~~l~~lK~L~l~~CGls~k~V~~~~~~fPsl~~L~L~~N~~~~~~~~~~~i~~~L~~LdL 253 (505)
T KOG3207|consen 193 -------------------TLLLSHLKQLVLNSCGLSWKDVQWILLTFPSLEVLYLEANEIILIKATSTKILQTLQELDL 253 (505)
T ss_pred -------------------hhhhhhhheEEeccCCCCHHHHHHHHHhCCcHHHhhhhcccccceecchhhhhhHHhhccc
Confidence 1123355555555555542222233345555565655555322122222233445555555
Q ss_pred ecceeecccC--cccccCCCCCEEECccCcccccCCcc------cccccCCcEEEeeccee
Q 037822 292 SNNNLSGEIP--RLWSNISSLYILDMSNNSLSGEIPES------IGSLLSVRFLILCNNHI 344 (497)
Q Consensus 292 ~~n~~~~~~~--~~~~~~~~L~~L~l~~n~i~~~~~~~------l~~~~~L~~L~l~~~~~ 344 (497)
++|.+. ..+ .....++.|+.|+++.|++.+..... ...+++|++|++..|++
T Consensus 254 s~N~li-~~~~~~~~~~l~~L~~Lnls~tgi~si~~~d~~s~~kt~~f~kL~~L~i~~N~I 313 (505)
T KOG3207|consen 254 SNNNLI-DFDQGYKVGTLPGLNQLNLSSTGIASIAEPDVESLDKTHTFPKLEYLNISENNI 313 (505)
T ss_pred cCCccc-ccccccccccccchhhhhccccCcchhcCCCccchhhhcccccceeeecccCcc
Confidence 555544 122 23344555555555555554321111 12344555555555554
No 33
>COG4886 Leucine-rich repeat (LRR) protein [Function unknown]
Probab=99.06 E-value=1.8e-10 Score=112.14 Aligned_cols=198 Identities=28% Similarity=0.435 Sum_probs=136.5
Q ss_pred eEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcC-CccEEEeecceeecccCcccccCCCCCEEECcc
Q 037822 239 KLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQ-QLLTLVISNNNLSGEIPRLWSNISSLYILDMSN 317 (497)
Q Consensus 239 ~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~-~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~ 317 (497)
.+....+.+....... ...+.++.+++.++.+. ..+....... +|+.|++++|.+. ..+..+..+++|+.|++++
T Consensus 97 ~l~~~~~~~~~~~~~~--~~~~~l~~L~l~~n~i~-~i~~~~~~~~~nL~~L~l~~N~i~-~l~~~~~~l~~L~~L~l~~ 172 (394)
T COG4886 97 SLDLNLNRLRSNISEL--LELTNLTSLDLDNNNIT-DIPPLIGLLKSNLKELDLSDNKIE-SLPSPLRNLPNLKNLDLSF 172 (394)
T ss_pred eeeccccccccCchhh--hcccceeEEecCCcccc-cCccccccchhhcccccccccchh-hhhhhhhccccccccccCC
Confidence 4666666553222221 24567888888888887 3444445553 7888888888877 5555677788888888888
Q ss_pred CcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCC
Q 037822 318 NSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTI 397 (497)
Q Consensus 318 n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~ 397 (497)
|++. ..+...+..+.|+.|++++|.+. .+|........|+++.+++|.+. ..+..+.. +.++..+.+.+|++. ..
T Consensus 173 N~l~-~l~~~~~~~~~L~~L~ls~N~i~-~l~~~~~~~~~L~~l~~~~N~~~-~~~~~~~~-~~~l~~l~l~~n~~~-~~ 247 (394)
T COG4886 173 NDLS-DLPKLLSNLSNLNNLDLSGNKIS-DLPPEIELLSALEELDLSNNSII-ELLSSLSN-LKNLSGLELSNNKLE-DL 247 (394)
T ss_pred chhh-hhhhhhhhhhhhhheeccCCccc-cCchhhhhhhhhhhhhhcCCcce-ecchhhhh-cccccccccCCceee-ec
Confidence 8887 44544446788888888888887 55655555666888888888544 44444443 677777778888776 33
Q ss_pred CcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCccccccee
Q 037822 398 PPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQV 447 (497)
Q Consensus 398 ~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~ 447 (497)
+..+..++.++.|++++|+++.... +..+.+++.|+++++......+.
T Consensus 248 ~~~~~~l~~l~~L~~s~n~i~~i~~--~~~~~~l~~L~~s~n~~~~~~~~ 295 (394)
T COG4886 248 PESIGNLSNLETLDLSNNQISSISS--LGSLTNLRELDLSGNSLSNALPL 295 (394)
T ss_pred cchhccccccceecccccccccccc--ccccCccCEEeccCccccccchh
Confidence 5667778888888888888884433 78888888888888877655444
No 34
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=99.01 E-value=2e-10 Score=119.61 Aligned_cols=104 Identities=30% Similarity=0.331 Sum_probs=48.9
Q ss_pred CccEEEcCCCC--CcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEE
Q 037822 18 LLEKLELGFNQ--LNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLD 95 (497)
Q Consensus 18 ~L~~L~l~~~~--i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~ 95 (497)
.|+.|-+.++. +.......|..++.|++||+++|.-.+.+|+.++.+-+||+|+++++.+. .+|..+.++.+|.+|+
T Consensus 546 ~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~L~~t~I~-~LP~~l~~Lk~L~~Ln 624 (889)
T KOG4658|consen 546 KLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLDLSDTGIS-HLPSGLGNLKKLIYLN 624 (889)
T ss_pred ccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhcccccCCCcc-ccchHHHHHHhhheec
Confidence 34444444443 23222233455555555555554433345555555555555555555555 4555555555555555
Q ss_pred cCCCccccccChhhhhcCCCCceEeccC
Q 037822 96 LSENQWEGIITETHFRNLSNLKELALNK 123 (497)
Q Consensus 96 l~~n~l~~~~~~~~~~~l~~L~~L~l~~ 123 (497)
+.++.-...++ .....+.+||+|.+..
T Consensus 625 l~~~~~l~~~~-~i~~~L~~Lr~L~l~~ 651 (889)
T KOG4658|consen 625 LEVTGRLESIP-GILLELQSLRVLRLPR 651 (889)
T ss_pred ccccccccccc-chhhhcccccEEEeec
Confidence 55444222121 2344455555555433
No 35
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=99.01 E-value=3.1e-10 Score=77.65 Aligned_cols=61 Identities=36% Similarity=0.450 Sum_probs=41.8
Q ss_pred CCccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcC
Q 037822 17 SLLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQM 77 (497)
Q Consensus 17 ~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~ 77 (497)
|+|++|++++|+++...+..|..+++|++|++++|.+....|.+|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 3567777777777766666677777777777777777666666677777777777776653
No 36
>KOG1259 consensus Nischarin, modulator of integrin alpha5 subunit action [Signal transduction mechanisms; Cytoskeleton]
Probab=98.94 E-value=2.1e-10 Score=99.86 Aligned_cols=130 Identities=28% Similarity=0.354 Sum_probs=78.0
Q ss_pred CCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEE
Q 037822 258 KIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFL 337 (497)
Q Consensus 258 ~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L 337 (497)
..+.|+++|+++|.|+ ...++..-.|.++.|++++|.+.. .. .++.+++|+.||+++|.++ .....-..+-++++|
T Consensus 282 TWq~LtelDLS~N~I~-~iDESvKL~Pkir~L~lS~N~i~~-v~-nLa~L~~L~~LDLS~N~Ls-~~~Gwh~KLGNIKtL 357 (490)
T KOG1259|consen 282 TWQELTELDLSGNLIT-QIDESVKLAPKLRRLILSQNRIRT-VQ-NLAELPQLQLLDLSGNLLA-ECVGWHLKLGNIKTL 357 (490)
T ss_pred hHhhhhhccccccchh-hhhhhhhhccceeEEeccccceee-eh-hhhhcccceEeecccchhH-hhhhhHhhhcCEeee
Confidence 3455666777777666 333445556677777777777652 22 2566677777777777665 333333445666777
Q ss_pred EeecceeeeeCCcccccCCCCCEEecCCCcCcccC-ChhHhhhCCCCCEEEccCcccc
Q 037822 338 ILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNI-PAWIGESMPSLSILRLRSNYFN 394 (497)
Q Consensus 338 ~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~-~~~~~~~~~~L~~L~l~~n~~~ 394 (497)
.+++|.+. ..+.+.++-+|..||+++|+|...- ...++. +|-|+.+.+.+|.+.
T Consensus 358 ~La~N~iE--~LSGL~KLYSLvnLDl~~N~Ie~ldeV~~IG~-LPCLE~l~L~~NPl~ 412 (490)
T KOG1259|consen 358 KLAQNKIE--TLSGLRKLYSLVNLDLSSNQIEELDEVNHIGN-LPCLETLRLTGNPLA 412 (490)
T ss_pred ehhhhhHh--hhhhhHhhhhheeccccccchhhHHHhccccc-ccHHHHHhhcCCCcc
Confidence 77777664 2345566667777777777665211 223443 667777777777765
No 37
>PF13855 LRR_8: Leucine rich repeat; PDB: 2O6S_A 3A79_B 3RFS_A 3G39_A 3VQ2_A 3VQ1_B 2Z64_A 2Z66_C 3FXI_A 2Z63_A ....
Probab=98.94 E-value=8.2e-10 Score=75.52 Aligned_cols=61 Identities=36% Similarity=0.487 Sum_probs=48.8
Q ss_pred CCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcCCCcc
Q 037822 41 KNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLSENQW 101 (497)
Q Consensus 41 ~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~l 101 (497)
++|++|++++|++....+.+|.++++|++|++++|.++...+.+|.++++|++|++++|++
T Consensus 1 p~L~~L~l~~n~l~~i~~~~f~~l~~L~~L~l~~N~l~~i~~~~f~~l~~L~~L~l~~N~l 61 (61)
T PF13855_consen 1 PNLESLDLSNNKLTEIPPDSFSNLPNLETLDLSNNNLTSIPPDAFSNLPNLRYLDLSNNNL 61 (61)
T ss_dssp TTESEEEETSSTESEECTTTTTTGTTESEEEETSSSESEEETTTTTTSTTESEEEETSSSB
T ss_pred CcCcEEECCCCCCCccCHHHHcCCCCCCEeEccCCccCccCHHHHcCCCCCCEEeCcCCcC
Confidence 4678888888888766667788888888888888888877777788888888888888764
No 38
>PLN03150 hypothetical protein; Provisional
Probab=98.93 E-value=2.6e-09 Score=109.05 Aligned_cols=105 Identities=32% Similarity=0.569 Sum_probs=85.1
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcC
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLS 97 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 97 (497)
.++.|++++|.+.+.+|..+..+++|++|++++|.+.+.+|..+..+++|+.|++++|++++..|..+.++++|++|+++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~L~~L~~L~Ls 498 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQLTSLRILNLN 498 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhcCCCCCEEECc
Confidence 37788888888888888888888999999999988888888888888999999999998888888888888899999999
Q ss_pred CCccccccChhhhhc-CCCCceEeccC
Q 037822 98 ENQWEGIITETHFRN-LSNLKELALNK 123 (497)
Q Consensus 98 ~n~l~~~~~~~~~~~-l~~L~~L~l~~ 123 (497)
+|.+.+.+|. .+.. ..++..+++.+
T Consensus 499 ~N~l~g~iP~-~l~~~~~~~~~l~~~~ 524 (623)
T PLN03150 499 GNSLSGRVPA-ALGGRLLHRASFNFTD 524 (623)
T ss_pred CCcccccCCh-HHhhccccCceEEecC
Confidence 8888877776 3433 34455555555
No 39
>PLN03150 hypothetical protein; Provisional
Probab=98.86 E-value=4.5e-09 Score=107.26 Aligned_cols=112 Identities=31% Similarity=0.477 Sum_probs=94.8
Q ss_pred CCCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEc
Q 037822 309 SLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRL 388 (497)
Q Consensus 309 ~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l 388 (497)
.++.|++++|.+.+..|..+..+++|+.|++++|.+.+.+|..+..+++|+.|++++|.+.+.+|..+.. +++|+.|++
T Consensus 419 ~v~~L~L~~n~L~g~ip~~i~~L~~L~~L~Ls~N~l~g~iP~~~~~l~~L~~LdLs~N~lsg~iP~~l~~-L~~L~~L~L 497 (623)
T PLN03150 419 FIDGLGLDNQGLRGFIPNDISKLRHLQSINLSGNSIRGNIPPSLGSITSLEVLDLSYNSFNGSIPESLGQ-LTSLRILNL 497 (623)
T ss_pred EEEEEECCCCCccccCCHHHhCCCCCCEEECCCCcccCcCChHHhCCCCCCEEECCCCCCCCCCchHHhc-CCCCCEEEC
Confidence 3778899999998888888889999999999999998888888899999999999999998888887776 899999999
Q ss_pred cCcccccCCCcccCCC-CCCCEEEccCCcCcCCC
Q 037822 389 RSNYFNGTIPPELCKL-PALHILDLSHNNLSGII 421 (497)
Q Consensus 389 ~~n~~~~~~~~~l~~l-~~L~~L~l~~n~i~~~~ 421 (497)
++|.+++.+|..+... .++..+++.+|......
T Consensus 498 s~N~l~g~iP~~l~~~~~~~~~l~~~~N~~lc~~ 531 (623)
T PLN03150 498 NGNSLSGRVPAALGGRLLHRASFNFTDNAGLCGI 531 (623)
T ss_pred cCCcccccCChHHhhccccCceEEecCCccccCC
Confidence 9999998888877653 46778888888755433
No 40
>KOG4658 consensus Apoptotic ATPase [Signal transduction mechanisms]
Probab=98.74 E-value=1e-08 Score=107.04 Aligned_cols=266 Identities=21% Similarity=0.199 Sum_probs=174.9
Q ss_pred ccCCCEEEccCCccccCCCC-CccccceEecccCcc-cccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEE
Q 037822 213 FRFPATVDLSSNSFEGPLPL-WSFNVTKLYLRDNSF-SGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLV 290 (497)
Q Consensus 213 ~~~l~~l~l~~~~~~~~~~~-~~~~L~~L~l~~~~~-~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~ 290 (497)
....+.+.+.++.+...... ..+.++.|-+..|.. ...++..++..+|.|+.||+++|.-.+..|..++.+-+|++|+
T Consensus 522 ~~~~rr~s~~~~~~~~~~~~~~~~~L~tLll~~n~~~l~~is~~ff~~m~~LrVLDLs~~~~l~~LP~~I~~Li~LryL~ 601 (889)
T KOG4658|consen 522 WNSVRRMSLMNNKIEHIAGSSENPKLRTLLLQRNSDWLLEISGEFFRSLPLLRVLDLSGNSSLSKLPSSIGELVHLRYLD 601 (889)
T ss_pred hhheeEEEEeccchhhccCCCCCCccceEEEeecchhhhhcCHHHHhhCcceEEEECCCCCccCcCChHHhhhhhhhccc
Confidence 34455566666655433322 344788888888862 3377888888999999999999887778999999999999999
Q ss_pred eecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEEEeecceee--eeCCcccccCCCCCEEecCCCcC
Q 037822 291 ISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHIS--GEVPPSLKNCSMMDSLDLGDNQL 368 (497)
Q Consensus 291 l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~--~~~~~~~~~~~~L~~L~l~~~~i 368 (497)
+++..+. .+|..+.++..|.+|++..+.-....+.....+++|++|.+...... ......+..+.+|+.+.+.....
T Consensus 602 L~~t~I~-~LP~~l~~Lk~L~~Lnl~~~~~l~~~~~i~~~L~~Lr~L~l~~s~~~~~~~~l~el~~Le~L~~ls~~~~s~ 680 (889)
T KOG4658|consen 602 LSDTGIS-HLPSGLGNLKKLIYLNLEVTGRLESIPGILLELQSLRVLRLPRSALSNDKLLLKELENLEHLENLSITISSV 680 (889)
T ss_pred ccCCCcc-ccchHHHHHHhhheeccccccccccccchhhhcccccEEEeeccccccchhhHHhhhcccchhhheeecchh
Confidence 9999988 89999999999999999988765556666777999999999876522 12233445566666666644432
Q ss_pred cccCChhHhhhCCCCC----EEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccC------CCCCcccCCCC
Q 037822 369 SGNIPAWIGESMPSLS----ILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGN------FSGMKVEPPDS 438 (497)
Q Consensus 369 ~~~~~~~~~~~~~~L~----~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~------l~~L~~L~l~~ 438 (497)
.+...+. .++.|+ .+.+.++... ..+..+..+.+|+.|.+.++.+......+... ++.+..+....
T Consensus 681 --~~~e~l~-~~~~L~~~~~~l~~~~~~~~-~~~~~~~~l~~L~~L~i~~~~~~e~~~~~~~~~~~~~~f~~l~~~~~~~ 756 (889)
T KOG4658|consen 681 --LLLEDLL-GMTRLRSLLQSLSIEGCSKR-TLISSLGSLGNLEELSILDCGISEIVIEWEESLIVLLCFPNLSKVSILN 756 (889)
T ss_pred --HhHhhhh-hhHHHHHHhHhhhhcccccc-eeecccccccCcceEEEEcCCCchhhcccccccchhhhHHHHHHHHhhc
Confidence 1111111 133333 3333333333 34556788899999999999987543332211 33444445555
Q ss_pred CcccccceeeeeCccccccccccccCEEEccCCcccccCChhhhccCCCCeEEC
Q 037822 439 VKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGEMPVELTRLIHLGTLNL 492 (497)
Q Consensus 439 ~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~l~l 492 (497)
|..... ..|....++|++|.+..+...+.+......+..++.+-+
T Consensus 757 ~~~~r~---------l~~~~f~~~L~~l~l~~~~~~e~~i~~~k~~~~l~~~i~ 801 (889)
T KOG4658|consen 757 CHMLRD---------LTWLLFAPHLTSLSLVSCRLLEDIIPKLKALLELKELIL 801 (889)
T ss_pred cccccc---------cchhhccCcccEEEEecccccccCCCHHHHhhhcccEEe
Confidence 544322 233456789999999988776666555555655554333
No 41
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.66 E-value=3e-10 Score=98.78 Aligned_cols=158 Identities=18% Similarity=0.169 Sum_probs=109.0
Q ss_pred CCCEEECCCCccccc-CCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcCCCc-cccccChhhhhcCCCCceE
Q 037822 42 NLRYLELWHNSFVGS-IPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLSENQ-WEGIITETHFRNLSNLKEL 119 (497)
Q Consensus 42 ~L~~L~l~~~~l~~~-~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~n~-l~~~~~~~~~~~l~~L~~L 119 (497)
.|+++|++...++.. +-.-++.+.+|+.|.+.++++.+.+...+++..+|+.|+++.+. ++.......+.+|+.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 588999998877632 22335678899999999999988888889999999999999865 4443333478899999999
Q ss_pred eccCccccceeeecccCCCCCCccccEEEccCCcCCC---CCCccccCCCCccEEEeecccc-ccccCchhhhcccCccE
Q 037822 120 ALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLGP---KFPTWLRNQTELTTLVLNNVRI-SDTIPDWFWQLDLTLDE 195 (497)
Q Consensus 120 ~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~~---~~~~~l~~l~~L~~L~l~~~~~-~~~~~~~~~~~~~~L~~ 195 (497)
++++|.........+...+.+ +|+.|+++|++-.- .+.--.+++|+|.+||++++.. +......+.++ +.|++
T Consensus 266 NlsWc~l~~~~Vtv~V~hise--~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~kf-~~L~~ 342 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISE--TLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFKF-NYLQH 342 (419)
T ss_pred CchHhhccchhhhHHHhhhch--hhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHhc-chhee
Confidence 999976443333333333333 78888888885331 2222345788999999988753 33333344444 47888
Q ss_pred EEccccc
Q 037822 196 LDVAYNE 202 (497)
Q Consensus 196 L~l~~~~ 202 (497)
+.++.|-
T Consensus 343 lSlsRCY 349 (419)
T KOG2120|consen 343 LSLSRCY 349 (419)
T ss_pred eehhhhc
Confidence 8887774
No 42
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.66 E-value=3.3e-09 Score=103.46 Aligned_cols=212 Identities=25% Similarity=0.198 Sum_probs=92.3
Q ss_pred CCCEEEccCCccccCC--CCCccccceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEee
Q 037822 215 FPATVDLSSNSFEGPL--PLWSFNVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVIS 292 (497)
Q Consensus 215 ~l~~l~l~~~~~~~~~--~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~ 292 (497)
.++.+.+..|.+.... ...+.+++.+++.+|.+..... . ...+++|++|++++|.|+.. ..+..++.|+.|+++
T Consensus 73 ~l~~l~l~~n~i~~~~~~l~~~~~l~~l~l~~n~i~~i~~-~-l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L~l~ 148 (414)
T KOG0531|consen 73 SLKELNLRQNLIAKILNHLSKLKSLEALDLYDNKIEKIEN-L-LSSLVNLQVLDLSFNKITKL--EGLSTLTLLKELNLS 148 (414)
T ss_pred hHHhhccchhhhhhhhcccccccceeeeeccccchhhccc-c-hhhhhcchheeccccccccc--cchhhccchhhheec
Confidence 3344444444444311 1233455555555555542211 0 12455555555555555422 223344445555555
Q ss_pred cceeecccCcccccCCCCCEEECccCcccccCC-cccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCccc
Q 037822 293 NNNLSGEIPRLWSNISSLYILDMSNNSLSGEIP-ESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGN 371 (497)
Q Consensus 293 ~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~-~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~ 371 (497)
+|.+. ....+..++.|+.+++++|++..... . ...+.+++.+.+.+|.+.. ...+..+..+..+++..|.+...
T Consensus 149 ~N~i~--~~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~~--i~~~~~~~~l~~~~l~~n~i~~~ 223 (414)
T KOG0531|consen 149 GNLIS--DISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIRE--IEGLDLLKKLVLLSLLDNKISKL 223 (414)
T ss_pred cCcch--hccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchhc--ccchHHHHHHHHhhcccccceec
Confidence 55554 11233335555555555555542222 1 3444555555555555431 12233333333334444444311
Q ss_pred CChhHhhhCC--CCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcc
Q 037822 372 IPAWIGESMP--SLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKY 441 (497)
Q Consensus 372 ~~~~~~~~~~--~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~ 441 (497)
-+.. . +. .|+.+++.+|++. ..+..+..+..+..+++.+|++... ..+.....+..+..+.+++
T Consensus 224 ~~l~--~-~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~--~~~~~~~~~~~~~~~~~~~ 289 (414)
T KOG0531|consen 224 EGLN--E-LVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNL--EGLERLPKLSELWLNDNKL 289 (414)
T ss_pred cCcc--c-chhHHHHHHhcccCccc-cccccccccccccccchhhcccccc--ccccccchHHHhccCcchh
Confidence 1100 0 11 1555666666555 2223445555556666666555522 1233333444444444443
No 43
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.62 E-value=9.5e-10 Score=106.84 Aligned_cols=178 Identities=25% Similarity=0.234 Sum_probs=122.4
Q ss_pred CcccccCCCCCEEECccCcccccCCcccccc-cCCcEEEeecceee----------eeCCcccccCCCCCEEecCCCcCc
Q 037822 301 PRLWSNISSLYILDMSNNSLSGEIPESIGSL-LSVRFLILCNNHIS----------GEVPPSLKNCSMMDSLDLGDNQLS 369 (497)
Q Consensus 301 ~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~-~~L~~L~l~~~~~~----------~~~~~~~~~~~~L~~L~l~~~~i~ 369 (497)
|-.+..+.+|+.|.+.+|.+.. . ..+..+ ..|++|... +.+. +.+..+ ..+.+|.+.+.+.|.+.
T Consensus 102 pi~ifpF~sLr~LElrg~~L~~-~-~GL~~lr~qLe~LIC~-~Sl~Al~~v~ascggd~~ns-~~Wn~L~~a~fsyN~L~ 177 (1096)
T KOG1859|consen 102 PISIFPFRSLRVLELRGCDLST-A-KGLQELRHQLEKLICH-NSLDALRHVFASCGGDISNS-PVWNKLATASFSYNRLV 177 (1096)
T ss_pred CceeccccceeeEEecCcchhh-h-hhhHHHHHhhhhhhhh-ccHHHHHHHHHHhccccccc-hhhhhHhhhhcchhhHH
Confidence 3344567899999999998873 1 112111 234444322 1111 111111 12567888888899876
Q ss_pred ccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeee
Q 037822 370 GNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVL 449 (497)
Q Consensus 370 ~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~ 449 (497)
.+...+- .++.++.|++++|+++.. ..+..+++|++|||++|.+....--....|+ |..|.+++|.+.+..-
T Consensus 178 -~mD~SLq-ll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lrnN~l~tL~g--- 249 (1096)
T KOG1859|consen 178 -LMDESLQ-LLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLRNNALTTLRG--- 249 (1096)
T ss_pred -hHHHHHH-HHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeecccHHHhhhh---
Confidence 5544443 378999999999999854 4788999999999999999854434556666 9999999998765433
Q ss_pred eCccccccccccccCEEEccCCccccc-CChhhhccCCCCeEECCCCCC
Q 037822 450 KGSEYVFYTTLYLVNLMDLSSNNLSGE-MPVELTRLIHLGTLNLSRNHL 497 (497)
Q Consensus 450 ~~~~~~~~~~~~~L~~L~l~~n~~~~~-~~~~l~~l~~L~~l~l~~n~i 497 (497)
+.++.+|+-||+++|-+.+- .-.-++.|..|+.|.|.|||+
T Consensus 250 -------ie~LksL~~LDlsyNll~~hseL~pLwsLs~L~~L~LeGNPl 291 (1096)
T KOG1859|consen 250 -------IENLKSLYGLDLSYNLLSEHSELEPLWSLSSLIVLWLEGNPL 291 (1096)
T ss_pred -------HHhhhhhhccchhHhhhhcchhhhHHHHHHHHHHHhhcCCcc
Confidence 36788999999999977532 112377889999999999986
No 44
>KOG0531 consensus Protein phosphatase 1, regulatory subunit, and related proteins [Signal transduction mechanisms]
Probab=98.61 E-value=4.2e-09 Score=102.76 Aligned_cols=240 Identities=25% Similarity=0.231 Sum_probs=150.6
Q ss_pred ccccceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEE
Q 037822 234 SFNVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYIL 313 (497)
Q Consensus 234 ~~~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 313 (497)
+..++.+.++.|.+.. + ..-...+..++.+++.+|.+... ...+..+++|++|++++|.|+.. ..+..++.|+.|
T Consensus 71 l~~l~~l~l~~n~i~~-~-~~~l~~~~~l~~l~l~~n~i~~i-~~~l~~~~~L~~L~ls~N~I~~i--~~l~~l~~L~~L 145 (414)
T KOG0531|consen 71 LTSLKELNLRQNLIAK-I-LNHLSKLKSLEALDLYDNKIEKI-ENLLSSLVNLQVLDLSFNKITKL--EGLSTLTLLKEL 145 (414)
T ss_pred hHhHHhhccchhhhhh-h-hcccccccceeeeeccccchhhc-ccchhhhhcchheeccccccccc--cchhhccchhhh
Confidence 4466667777776652 1 12124677888888888888632 22266778888888888888732 345666778888
Q ss_pred ECccCcccccCCcccccccCCcEEEeecceeeeeCC-cccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcc
Q 037822 314 DMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVP-PSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNY 392 (497)
Q Consensus 314 ~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~-~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~ 392 (497)
++++|.|.. ...+..++.|+.+++++|.+....+ . ...+.+++.+.+.+|.+. .+...-. +..+..+++..|.
T Consensus 146 ~l~~N~i~~--~~~~~~l~~L~~l~l~~n~i~~ie~~~-~~~~~~l~~l~l~~n~i~-~i~~~~~--~~~l~~~~l~~n~ 219 (414)
T KOG0531|consen 146 NLSGNLISD--ISGLESLKSLKLLDLSYNRIVDIENDE-LSELISLEELDLGGNSIR-EIEGLDL--LKKLVLLSLLDNK 219 (414)
T ss_pred eeccCcchh--ccCCccchhhhcccCCcchhhhhhhhh-hhhccchHHHhccCCchh-cccchHH--HHHHHHhhccccc
Confidence 888888863 2345557888888888888764333 1 467788888888888776 3322111 3344445777777
Q ss_pred cccCCCcccCCCCC--CCEEEccCCcCcCCCCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEEccC
Q 037822 393 FNGTIPPELCKLPA--LHILDLSHNNLSGIIPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSS 470 (497)
Q Consensus 393 ~~~~~~~~l~~l~~--L~~L~l~~n~i~~~~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~ 470 (497)
++.. ..+..+.. |+.+++++|.+. ..++.+..+..+..|++..+++...... ...+.+..+....
T Consensus 220 i~~~--~~l~~~~~~~L~~l~l~~n~i~-~~~~~~~~~~~l~~l~~~~n~~~~~~~~----------~~~~~~~~~~~~~ 286 (414)
T KOG0531|consen 220 ISKL--EGLNELVMLHLRELYLSGNRIS-RSPEGLENLKNLPVLDLSSNRISNLEGL----------ERLPKLSELWLND 286 (414)
T ss_pred ceec--cCcccchhHHHHHHhcccCccc-cccccccccccccccchhhccccccccc----------cccchHHHhccCc
Confidence 7632 22333333 788888888887 3345677777888888777776433221 3344555566666
Q ss_pred Cccccc---CC-hhhhccCCCCeEECCCCCC
Q 037822 471 NNLSGE---MP-VELTRLIHLGTLNLSRNHL 497 (497)
Q Consensus 471 n~~~~~---~~-~~l~~l~~L~~l~l~~n~i 497 (497)
+.+... .. ......+.++.+.+.+|++
T Consensus 287 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 317 (414)
T KOG0531|consen 287 NKLALSEAISQEYITSAAPTLVTLTLELNPI 317 (414)
T ss_pred chhcchhhhhccccccccccccccccccCcc
Confidence 665421 11 1145667777777777763
No 45
>KOG2120 consensus SCF ubiquitin ligase, Skp2 component [Posttranslational modification, protein turnover, chaperones]
Probab=98.59 E-value=9.2e-10 Score=95.83 Aligned_cols=178 Identities=21% Similarity=0.173 Sum_probs=114.5
Q ss_pred ccceEecccCcccccCChhhhcCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecc--cCcccccCCCCCEE
Q 037822 236 NVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGE--IPRLWSNISSLYIL 313 (497)
Q Consensus 236 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~--~~~~~~~~~~L~~L 313 (497)
.++.++++...++......+.+.+.+|+.|.+.++++.+.....++.-.+|+.++++.+.-... ....+++++.|.+|
T Consensus 186 Rlq~lDLS~s~it~stl~~iLs~C~kLk~lSlEg~~LdD~I~~~iAkN~~L~~lnlsm~sG~t~n~~~ll~~scs~L~~L 265 (419)
T KOG2120|consen 186 RLQHLDLSNSVITVSTLHGILSQCSKLKNLSLEGLRLDDPIVNTIAKNSNLVRLNLSMCSGFTENALQLLLSSCSRLDEL 265 (419)
T ss_pred hhHHhhcchhheeHHHHHHHHHHHHhhhhccccccccCcHHHHHHhccccceeeccccccccchhHHHHHHHhhhhHhhc
Confidence 5777888877776444445556788888888888888777777777888888888887753211 22345778888888
Q ss_pred ECccCcccccCCccc-c-cccCCcEEEeecceee---eeCCcccccCCCCCEEecCCCc-CcccCChhHhhhCCCCCEEE
Q 037822 314 DMSNNSLSGEIPESI-G-SLLSVRFLILCNNHIS---GEVPPSLKNCSMMDSLDLGDNQ-LSGNIPAWIGESMPSLSILR 387 (497)
Q Consensus 314 ~l~~n~i~~~~~~~l-~-~~~~L~~L~l~~~~~~---~~~~~~~~~~~~L~~L~l~~~~-i~~~~~~~~~~~~~~L~~L~ 387 (497)
+++.|.+......+. . --++|+.|+++|+.-. ..+..-...||+|.+||+++|. +++...+.+++ ++.|+.|.
T Consensus 266 NlsWc~l~~~~Vtv~V~hise~l~~LNlsG~rrnl~~sh~~tL~~rcp~l~~LDLSD~v~l~~~~~~~~~k-f~~L~~lS 344 (419)
T KOG2120|consen 266 NLSWCFLFTEKVTVAVAHISETLTQLNLSGYRRNLQKSHLSTLVRRCPNLVHLDLSDSVMLKNDCFQEFFK-FNYLQHLS 344 (419)
T ss_pred CchHhhccchhhhHHHhhhchhhhhhhhhhhHhhhhhhHHHHHHHhCCceeeeccccccccCchHHHHHHh-cchheeee
Confidence 888887664332211 1 1357788888876421 1111223568888888888873 44434444554 77888888
Q ss_pred ccCcccccCCCc---ccCCCCCCCEEEccCCc
Q 037822 388 LRSNYFNGTIPP---ELCKLPALHILDLSHNN 416 (497)
Q Consensus 388 l~~n~~~~~~~~---~l~~l~~L~~L~l~~n~ 416 (497)
++.|-.. +|. .+...|.|.+|++.++-
T Consensus 345 lsRCY~i--~p~~~~~l~s~psl~yLdv~g~v 374 (419)
T KOG2120|consen 345 LSRCYDI--IPETLLELNSKPSLVYLDVFGCV 374 (419)
T ss_pred hhhhcCC--ChHHeeeeccCcceEEEEecccc
Confidence 8877542 232 34566777788776653
No 46
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.55 E-value=1.5e-08 Score=88.49 Aligned_cols=209 Identities=16% Similarity=0.173 Sum_probs=117.1
Q ss_pred hhcCCCCccEEEcccCccee--cccccccCcCCccEEEeecceeecccCccc-ccCCCCCEEECccCcccc-cCCccccc
Q 037822 255 FGQKIPFLTDLDISFNSLNG--SVSKSICNLQQLLTLVISNNNLSGEIPRLW-SNISSLYILDMSNNSLSG-EIPESIGS 330 (497)
Q Consensus 255 ~~~~~~~L~~L~l~~~~i~~--~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~-~~~~~L~~L~l~~n~i~~-~~~~~l~~ 330 (497)
+...++.++++|+.+|.+.+ .....+.++|.|++|+++.|.+.. ....+ ....+|+.|.+.+..+.- .....+..
T Consensus 66 ~~~~~~~v~elDL~~N~iSdWseI~~ile~lP~l~~LNls~N~L~s-~I~~lp~p~~nl~~lVLNgT~L~w~~~~s~l~~ 144 (418)
T KOG2982|consen 66 FGSSVTDVKELDLTGNLISDWSEIGAILEQLPALTTLNLSCNSLSS-DIKSLPLPLKNLRVLVLNGTGLSWTQSTSSLDD 144 (418)
T ss_pred HHHHhhhhhhhhcccchhccHHHHHHHHhcCccceEeeccCCcCCC-ccccCcccccceEEEEEcCCCCChhhhhhhhhc
Confidence 33556777888888887763 333455677888888888877662 22222 245677777777776541 12234556
Q ss_pred ccCCcEEEeecceeeee--CCcccc-cCCCCCEEecCCCcCcccCCh--hHhhhCCCCCEEEccCcccccC-CCcccCCC
Q 037822 331 LLSVRFLILCNNHISGE--VPPSLK-NCSMMDSLDLGDNQLSGNIPA--WIGESMPSLSILRLRSNYFNGT-IPPELCKL 404 (497)
Q Consensus 331 ~~~L~~L~l~~~~~~~~--~~~~~~-~~~~L~~L~l~~~~i~~~~~~--~~~~~~~~L~~L~l~~n~~~~~-~~~~l~~l 404 (497)
+|.+++|+++.|..... ...... .-+.+.+++...|... .... .+..-+|++..+.+..|.+.+. ....+..+
T Consensus 145 lP~vtelHmS~N~~rq~n~Dd~c~e~~s~~v~tlh~~~c~~~-~w~~~~~l~r~Fpnv~sv~v~e~PlK~~s~ek~se~~ 223 (418)
T KOG2982|consen 145 LPKVTELHMSDNSLRQLNLDDNCIEDWSTEVLTLHQLPCLEQ-LWLNKNKLSRIFPNVNSVFVCEGPLKTESSEKGSEPF 223 (418)
T ss_pred chhhhhhhhccchhhhhccccccccccchhhhhhhcCCcHHH-HHHHHHhHHhhcccchheeeecCcccchhhcccCCCC
Confidence 67777777777744311 111111 2246666666666543 1111 2233367777777777766542 22455666
Q ss_pred CCCCEEEccCCcCcCC-CCccccCCCCCcccCCCCCcccccceeeeeCccccccccccccCEEE
Q 037822 405 PALHILDLSHNNLSGI-IPPCVGNFSGMKVEPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMD 467 (497)
Q Consensus 405 ~~L~~L~l~~n~i~~~-~~~~l~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~ 467 (497)
+.+-.|+|+.++|..- ..+.+..++.+..|.++++++...... .......++.+++++.|+
T Consensus 224 p~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~d~l~~--~err~llIaRL~~v~vLN 285 (418)
T KOG2982|consen 224 PSLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLSDPLRG--GERRFLLIARLTKVQVLN 285 (418)
T ss_pred CcchhhhhcccccccHHHHHHHcCCchhheeeccCCcccccccC--CcceEEEEeeccceEEec
Confidence 7777777877777522 123455666666666666665544433 222233344455555544
No 47
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.40 E-value=4.6e-09 Score=95.83 Aligned_cols=61 Identities=26% Similarity=0.258 Sum_probs=33.2
Q ss_pred ccceEecccCc-ccccCChhhhcCCCCccEEEcccCcceec--ccccccCcCCccEEEeeccee
Q 037822 236 NVTKLYLRDNS-FSGPIPRDFGQKIPFLTDLDISFNSLNGS--VSKSICNLQQLLTLVISNNNL 296 (497)
Q Consensus 236 ~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~i~~~--~~~~l~~l~~L~~L~l~~n~~ 296 (497)
+|+.+.+.+|+ +++.....+....+.|+.+++.++..... ....-.+++.|+++.+++|..
T Consensus 321 ~L~~l~l~~c~~fsd~~ft~l~rn~~~Le~l~~e~~~~~~d~tL~sls~~C~~lr~lslshce~ 384 (483)
T KOG4341|consen 321 NLQVLELSGCQQFSDRGFTMLGRNCPHLERLDLEECGLITDGTLASLSRNCPRLRVLSLSHCEL 384 (483)
T ss_pred ceEEEeccccchhhhhhhhhhhcCChhhhhhcccccceehhhhHhhhccCCchhccCChhhhhh
Confidence 45555555542 33333344445677777777777654321 222233466777777776653
No 48
>KOG2982 consensus Uncharacterized conserved protein [Function unknown]
Probab=98.40 E-value=6.2e-08 Score=84.64 Aligned_cols=38 Identities=29% Similarity=0.286 Sum_probs=25.5
Q ss_pred ccceEecccCcccccCChhhhcCCCCccEEEcccCcce
Q 037822 236 NVTKLYLRDNSFSGPIPRDFGQKIPFLTDLDISFNSLN 273 (497)
Q Consensus 236 ~L~~L~l~~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~ 273 (497)
.+.-|+++.+++..+...+....++.|..|.++++++.
T Consensus 225 ~~~~LnL~~~~idswasvD~Ln~f~~l~dlRv~~~Pl~ 262 (418)
T KOG2982|consen 225 SLSCLNLGANNIDSWASVDALNGFPQLVDLRVSENPLS 262 (418)
T ss_pred cchhhhhcccccccHHHHHHHcCCchhheeeccCCccc
Confidence 34455666666665555555567888888888888765
No 49
>KOG1859 consensus Leucine-rich repeat proteins [General function prediction only]
Probab=98.39 E-value=5.9e-09 Score=101.47 Aligned_cols=128 Identities=23% Similarity=0.205 Sum_probs=97.0
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcC
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLS 97 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 97 (497)
.|...+.++|.++ ...+++.-+++|+.|+|++|++... +.+..+++|++||+++|.+..........+. |+.|+++
T Consensus 165 ~L~~a~fsyN~L~-~mD~SLqll~ale~LnLshNk~~~v--~~Lr~l~~LkhLDlsyN~L~~vp~l~~~gc~-L~~L~lr 240 (1096)
T KOG1859|consen 165 KLATASFSYNRLV-LMDESLQLLPALESLNLSHNKFTKV--DNLRRLPKLKHLDLSYNCLRHVPQLSMVGCK-LQLLNLR 240 (1096)
T ss_pred hHhhhhcchhhHH-hHHHHHHHHHHhhhhccchhhhhhh--HHHHhcccccccccccchhccccccchhhhh-heeeeec
Confidence 5778889999888 6667888899999999999999855 3788999999999999998843333445555 9999999
Q ss_pred CCccccccChhhhhcCCCCceEeccCccccceeeecccCCCCCCccccEEEccCCcCC
Q 037822 98 ENQWEGIITETHFRNLSNLKELALNKQSENISLIFNISSHWIPPFKLTFINIRSCQLG 155 (497)
Q Consensus 98 ~n~l~~~~~~~~~~~l~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~~ 155 (497)
+|.+++. ..++++++|+.|+++.|-+. ......-+..+..|+.|+|.+|++-
T Consensus 241 nN~l~tL---~gie~LksL~~LDlsyNll~---~hseL~pLwsLs~L~~L~LeGNPl~ 292 (1096)
T KOG1859|consen 241 NNALTTL---RGIENLKSLYGLDLSYNLLS---EHSELEPLWSLSSLIVLWLEGNPLC 292 (1096)
T ss_pred ccHHHhh---hhHHhhhhhhccchhHhhhh---cchhhhHHHHHHHHHHHhhcCCccc
Confidence 9998764 36888999999999885322 2222223344557888888888764
No 50
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.31 E-value=4.7e-08 Score=84.26 Aligned_cols=134 Identities=21% Similarity=0.174 Sum_probs=66.5
Q ss_pred CCccEEEeecceeecccC-----cccccCCCCCEEECccCcccccCCc-----ccccccCCcEEEeecceeeee----CC
Q 037822 284 QQLLTLVISNNNLSGEIP-----RLWSNISSLYILDMSNNSLSGEIPE-----SIGSLLSVRFLILCNNHISGE----VP 349 (497)
Q Consensus 284 ~~L~~L~l~~n~~~~~~~-----~~~~~~~~L~~L~l~~n~i~~~~~~-----~l~~~~~L~~L~l~~~~~~~~----~~ 349 (497)
|.|+++.+..|++. ..+ ..+..-..|+++.+.+|.|...... .+..+.+|+.|++.+|.++-. ..
T Consensus 157 p~Le~vicgrNRle-ngs~~~~a~~l~sh~~lk~vki~qNgIrpegv~~L~~~gl~y~~~LevLDlqDNtft~~gS~~La 235 (388)
T COG5238 157 PKLEVVICGRNRLE-NGSKELSAALLESHENLKEVKIQQNGIRPEGVTMLAFLGLFYSHSLEVLDLQDNTFTLEGSRYLA 235 (388)
T ss_pred CCceEEEeccchhc-cCcHHHHHHHHHhhcCceeEEeeecCcCcchhHHHHHHHHHHhCcceeeeccccchhhhhHHHHH
Confidence 55666666666554 111 1122224566666666655422111 123355666666666665421 22
Q ss_pred cccccCCCCCEEecCCCcCcccCChhHhh-----hCCCCCEEEccCcccccCCCcc-----c--CCCCCCCEEEccCCcC
Q 037822 350 PSLKNCSMMDSLDLGDNQLSGNIPAWIGE-----SMPSLSILRLRSNYFNGTIPPE-----L--CKLPALHILDLSHNNL 417 (497)
Q Consensus 350 ~~~~~~~~L~~L~l~~~~i~~~~~~~~~~-----~~~~L~~L~l~~n~~~~~~~~~-----l--~~l~~L~~L~l~~n~i 417 (497)
..+..|+.|+.|++.+|-+.......++. ..|+|..|-...|...+.+... + ..+|-|..|.+.+|.|
T Consensus 236 ~al~~W~~lrEL~lnDClls~~G~~~v~~~f~e~~~p~l~~L~~~Yne~~~~~i~~~~l~~~e~~~~p~L~~le~ngNr~ 315 (388)
T COG5238 236 DALCEWNLLRELRLNDCLLSNEGVKSVLRRFNEKFVPNLMPLPGDYNERRGGIILDISLNEFEQDAVPLLVDLERNGNRI 315 (388)
T ss_pred HHhcccchhhhccccchhhccccHHHHHHHhhhhcCCCccccccchhhhcCceeeeechhhhhhcccHHHHHHHHccCcc
Confidence 33445566666666666555433333222 1356666666666544321111 1 2455566666666766
Q ss_pred c
Q 037822 418 S 418 (497)
Q Consensus 418 ~ 418 (497)
.
T Consensus 316 ~ 316 (388)
T COG5238 316 K 316 (388)
T ss_pred h
Confidence 5
No 51
>KOG4341 consensus F-box protein containing LRR [General function prediction only]
Probab=98.27 E-value=8.7e-09 Score=94.03 Aligned_cols=60 Identities=18% Similarity=0.218 Sum_probs=40.8
Q ss_pred cccEEEccCCcCCCC--CCccccCCCCccEEEeeccc-cccccCchhhhcccCccEEEccccc
Q 037822 143 KLTFINIRSCQLGPK--FPTWLRNQTELTTLVLNNVR-ISDTIPDWFWQLDLTLDELDVAYNE 202 (497)
Q Consensus 143 ~L~~l~l~~~~~~~~--~~~~l~~l~~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~ 202 (497)
.|+.+.+.+++-... .......+|+++.|.+.++. +++..-..+...+++++++++..|.
T Consensus 139 ~lk~LSlrG~r~v~~sslrt~~~~CpnIehL~l~gc~~iTd~s~~sla~~C~~l~~l~L~~c~ 201 (483)
T KOG4341|consen 139 FLKELSLRGCRAVGDSSLRTFASNCPNIEHLALYGCKKITDSSLLSLARYCRKLRHLNLHSCS 201 (483)
T ss_pred ccccccccccccCCcchhhHHhhhCCchhhhhhhcceeccHHHHHHHHHhcchhhhhhhcccc
Confidence 678888888764432 22344578888888888875 4445555666777788888887764
No 52
>COG5238 RNA1 Ran GTPase-activating protein (RanGAP) involved in mRNA processing and transport [Signal transduction mechanisms / RNA processing and modification]
Probab=98.23 E-value=1.1e-07 Score=82.03 Aligned_cols=43 Identities=23% Similarity=0.390 Sum_probs=23.8
Q ss_pred CCCCCCccccEEEccCCcCCCCCCcc----ccCCCCccEEEeecccc
Q 037822 136 SHWIPPFKLTFINIRSCQLGPKFPTW----LRNQTELTTLVLNNVRI 178 (497)
Q Consensus 136 ~~~~~~~~L~~l~l~~~~~~~~~~~~----l~~l~~L~~L~l~~~~~ 178 (497)
+++.+|++|+.++|++|.++...|+. ++.-..|++|.+.+|.+
T Consensus 86 ~aLlkcp~l~~v~LSDNAfg~~~~e~L~d~is~~t~l~HL~l~NnGl 132 (388)
T COG5238 86 KALLKCPRLQKVDLSDNAFGSEFPEELGDLISSSTDLVHLKLNNNGL 132 (388)
T ss_pred HHHhcCCcceeeeccccccCcccchHHHHHHhcCCCceeEEeecCCC
Confidence 34455666666666666655544433 33445566666666554
No 53
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=98.20 E-value=2.5e-06 Score=70.65 Aligned_cols=103 Identities=17% Similarity=0.123 Sum_probs=70.8
Q ss_pred ccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcCC
Q 037822 19 LEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLSE 98 (497)
Q Consensus 19 L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~~ 98 (497)
=+.+++.+.++..+. .-=........+|+++|.+... ..|..++.|.+|.+++|+|+...|.--..+++|++|.+.+
T Consensus 21 e~e~~LR~lkip~ie-nlg~~~d~~d~iDLtdNdl~~l--~~lp~l~rL~tLll~nNrIt~I~p~L~~~~p~l~~L~Ltn 97 (233)
T KOG1644|consen 21 ERELDLRGLKIPVIE-NLGATLDQFDAIDLTDNDLRKL--DNLPHLPRLHTLLLNNNRITRIDPDLDTFLPNLKTLILTN 97 (233)
T ss_pred ccccccccccccchh-hccccccccceecccccchhhc--ccCCCccccceEEecCCcceeeccchhhhccccceEEecC
Confidence 456777777765221 1112345677888888887633 4577888899999999998876666556678899999999
Q ss_pred CccccccChhhhhcCCCCceEeccCc
Q 037822 99 NQWEGIITETHFRNLSNLKELALNKQ 124 (497)
Q Consensus 99 n~l~~~~~~~~~~~l~~L~~L~l~~~ 124 (497)
|.|...-.-.-+..|+.|++|.+-+|
T Consensus 98 Nsi~~l~dl~pLa~~p~L~~Ltll~N 123 (233)
T KOG1644|consen 98 NSIQELGDLDPLASCPKLEYLTLLGN 123 (233)
T ss_pred cchhhhhhcchhccCCccceeeecCC
Confidence 88875433344566667777666654
No 54
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=98.03 E-value=2.2e-07 Score=71.73 Aligned_cols=35 Identities=29% Similarity=0.506 Sum_probs=13.5
Q ss_pred CCCEEECccCcccccCCcccccccCCcEEEeeccee
Q 037822 309 SLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHI 344 (497)
Q Consensus 309 ~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~ 344 (497)
.++.+++++|.|. ..|..+..++.|+.|++..|++
T Consensus 78 t~t~lNl~~neis-dvPeE~Aam~aLr~lNl~~N~l 112 (177)
T KOG4579|consen 78 TATTLNLANNEIS-DVPEELAAMPALRSLNLRFNPL 112 (177)
T ss_pred hhhhhhcchhhhh-hchHHHhhhHHhhhcccccCcc
Confidence 3344444444443 2222233334444444444433
No 55
>PRK15386 type III secretion protein GogB; Provisional
Probab=98.01 E-value=2.2e-05 Score=74.01 Aligned_cols=134 Identities=22% Similarity=0.216 Sum_probs=72.6
Q ss_pred CCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccC-cccccCCcccccccCCcE
Q 037822 258 KIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNN-SLSGEIPESIGSLLSVRF 336 (497)
Q Consensus 258 ~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n-~i~~~~~~~l~~~~~L~~ 336 (497)
.++++++|++++|.++ ..|. -.++|++|.+++|.-....|..+ .++|+.|++++| .+. ..| ++|+.
T Consensus 50 ~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L--P~nLe~L~Ls~Cs~L~-sLP------~sLe~ 116 (426)
T PRK15386 50 EARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI--PEGLEKLTVCHCPEIS-GLP------ESVRS 116 (426)
T ss_pred HhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh--hhhhhheEccCccccc-ccc------cccce
Confidence 4577888888888766 3341 23468888887755433555544 357788888777 433 222 35666
Q ss_pred EEeecceeeeeCCcccccC-CCCCEEecCCCc-Cc-ccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEcc
Q 037822 337 LILCNNHISGEVPPSLKNC-SMMDSLDLGDNQ-LS-GNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLS 413 (497)
Q Consensus 337 L~l~~~~~~~~~~~~~~~~-~~L~~L~l~~~~-i~-~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~ 413 (497)
|++.++... . +..+ ++|+.|.+.++. .. ..++.. -+++|+.|++++|... ..|..+ ..+|+.|.++
T Consensus 117 L~L~~n~~~-~----L~~LPssLk~L~I~~~n~~~~~~lp~~---LPsSLk~L~Is~c~~i-~LP~~L--P~SLk~L~ls 185 (426)
T PRK15386 117 LEIKGSATD-S----IKNVPNGLTSLSINSYNPENQARIDNL---ISPSLKTLSLTGCSNI-ILPEKL--PESLQSITLH 185 (426)
T ss_pred EEeCCCCCc-c----cccCcchHhheeccccccccccccccc---cCCcccEEEecCCCcc-cCcccc--cccCcEEEec
Confidence 666654432 1 1111 246666664322 11 011111 1356777777777654 333322 2467777776
Q ss_pred CC
Q 037822 414 HN 415 (497)
Q Consensus 414 ~n 415 (497)
.+
T Consensus 186 ~n 187 (426)
T PRK15386 186 IE 187 (426)
T ss_pred cc
Confidence 55
No 56
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=98.01 E-value=5e-06 Score=51.78 Aligned_cols=15 Identities=47% Similarity=0.518 Sum_probs=5.5
Q ss_pred ccCCCCCCEEECCCC
Q 037822 37 LGYLKNLRYLELWHN 51 (497)
Q Consensus 37 ~~~l~~L~~L~l~~~ 51 (497)
++++++|++|++++|
T Consensus 20 l~~l~~L~~L~l~~N 34 (44)
T PF12799_consen 20 LSNLPNLETLNLSNN 34 (44)
T ss_dssp GTTCTTSSEEEETSS
T ss_pred HhCCCCCCEEEecCC
Confidence 333333333333333
No 57
>KOG1644 consensus U2-associated snRNP A' protein [RNA processing and modification]
Probab=97.99 E-value=1.8e-05 Score=65.70 Aligned_cols=104 Identities=17% Similarity=0.170 Sum_probs=63.2
Q ss_pred cCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccC-CCcccCCCCCCCEE
Q 037822 332 LSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGT-IPPELCKLPALHIL 410 (497)
Q Consensus 332 ~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~-~~~~l~~l~~L~~L 410 (497)
.....+|+++|.+. ....|..++.|.+|.+++|+|+ .+...+...+++|..|.+.+|.+... .-..+..||.|++|
T Consensus 42 d~~d~iDLtdNdl~--~l~~lp~l~rL~tLll~nNrIt-~I~p~L~~~~p~l~~L~LtnNsi~~l~dl~pLa~~p~L~~L 118 (233)
T KOG1644|consen 42 DQFDAIDLTDNDLR--KLDNLPHLPRLHTLLLNNNRIT-RIDPDLDTFLPNLKTLILTNNSIQELGDLDPLASCPKLEYL 118 (233)
T ss_pred cccceecccccchh--hcccCCCccccceEEecCCcce-eeccchhhhccccceEEecCcchhhhhhcchhccCCcccee
Confidence 45566677777664 2234666777777777777777 55445555567788888887776521 11345677788888
Q ss_pred EccCCcCcCCCC---ccccCCCCCcccCCCC
Q 037822 411 DLSHNNLSGIIP---PCVGNFSGMKVEPPDS 438 (497)
Q Consensus 411 ~l~~n~i~~~~~---~~l~~l~~L~~L~l~~ 438 (497)
.+-+|+++..-- -.+..+++|++|++..
T Consensus 119 tll~Npv~~k~~YR~yvl~klp~l~~LDF~k 149 (233)
T KOG1644|consen 119 TLLGNPVEHKKNYRLYVLYKLPSLRTLDFQK 149 (233)
T ss_pred eecCCchhcccCceeEEEEecCcceEeehhh
Confidence 888887764321 1234444444444443
No 58
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.98 E-value=1e-06 Score=89.95 Aligned_cols=121 Identities=14% Similarity=0.162 Sum_probs=61.9
Q ss_pred CCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCcccccCCCcccCCCCCCCEEEccCCcCcC-CCCccccCCCCCcc
Q 037822 355 CSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSG-IIPPCVGNFSGMKV 433 (497)
Q Consensus 355 ~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~-~~~~~l~~l~~L~~ 433 (497)
+|+|++|.+++-.+...--..++.++|+|+.||+++++++.. .+++.+++|+.|.+.+=.+.. ..-..+.++++|++
T Consensus 147 LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L~mrnLe~e~~~~l~~LF~L~~L~v 224 (699)
T KOG3665|consen 147 LPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVLSMRNLEFESYQDLIDLFNLKKLRV 224 (699)
T ss_pred CcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHHhccCCCCCchhhHHHHhcccCCCe
Confidence 455555555554432221222333455566666665555522 445555566655555555442 11223455566666
Q ss_pred cCCCCCcccccceeeeeCccccccccccccCEEEccCCcccccCCh
Q 037822 434 EPPDSVKYEGSLQVVLKGSEYVFYTTLYLVNLMDLSSNNLSGEMPV 479 (497)
Q Consensus 434 L~l~~~~~~~~~~~~~~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~ 479 (497)
||+|.-+........ ......-..+|.|+.||.|++.+.+..-+
T Consensus 225 LDIS~~~~~~~~~ii--~qYlec~~~LpeLrfLDcSgTdi~~~~le 268 (699)
T KOG3665|consen 225 LDISRDKNNDDTKII--EQYLECGMVLPELRFLDCSGTDINEEILE 268 (699)
T ss_pred eeccccccccchHHH--HHHHHhcccCccccEEecCCcchhHHHHH
Confidence 666555544333100 00111224588999999999988766544
No 59
>PF12799 LRR_4: Leucine Rich repeats (2 copies); PDB: 2OMT_A 1XEU_A 2OMX_A 2OMU_A 2UZY_A 2WQU_D 1D0B_A 2WQW_A 1OTO_A 2WQV_B ....
Probab=97.95 E-value=7.7e-06 Score=50.96 Aligned_cols=36 Identities=39% Similarity=0.626 Sum_probs=16.3
Q ss_pred CCCEEECCCCcccccCCccccCCCCCCEEECcCCcCc
Q 037822 42 NLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMN 78 (497)
Q Consensus 42 ~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~ 78 (497)
+|++|++++|+++ .+|..+.++++|++|++++|+++
T Consensus 2 ~L~~L~l~~N~i~-~l~~~l~~l~~L~~L~l~~N~i~ 37 (44)
T PF12799_consen 2 NLEELDLSNNQIT-DLPPELSNLPNLETLNLSNNPIS 37 (44)
T ss_dssp T-SEEEETSSS-S-SHGGHGTTCTTSSEEEETSSCCS
T ss_pred cceEEEccCCCCc-ccCchHhCCCCCCEEEecCCCCC
Confidence 4455555555554 23333455555555555555444
No 60
>KOG4579 consensus Leucine-rich repeat (LRR) protein associated with apoptosis in muscle tissue [General function prediction only]
Probab=97.94 E-value=3.6e-07 Score=70.57 Aligned_cols=104 Identities=27% Similarity=0.413 Sum_probs=50.5
Q ss_pred CCEEECccCcccccCCc---ccccccCCcEEEeecceeeeeCCccc-ccCCCCCEEecCCCcCcccCChhHhhhCCCCCE
Q 037822 310 LYILDMSNNSLSGEIPE---SIGSLLSVRFLILCNNHISGEVPPSL-KNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSI 385 (497)
Q Consensus 310 L~~L~l~~n~i~~~~~~---~l~~~~~L~~L~l~~~~~~~~~~~~~-~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~ 385 (497)
+..++++.|++. -+++ .+.....|+..++++|.+. .+|..| ..++.++++++++|.+. .+|..+.. ++.|+.
T Consensus 29 ~h~ldLssc~lm-~i~davy~l~~~~el~~i~ls~N~fk-~fp~kft~kf~t~t~lNl~~neis-dvPeE~Aa-m~aLr~ 104 (177)
T KOG4579|consen 29 LHFLDLSSCQLM-YIADAVYMLSKGYELTKISLSDNGFK-KFPKKFTIKFPTATTLNLANNEIS-DVPEELAA-MPALRS 104 (177)
T ss_pred hhhcccccchhh-HHHHHHHHHhCCceEEEEecccchhh-hCCHHHhhccchhhhhhcchhhhh-hchHHHhh-hHHhhh
Confidence 444555555543 1221 2223334455555555554 333333 23445555555555555 55555433 555555
Q ss_pred EEccCcccccCCCcccCCCCCCCEEEccCCcCc
Q 037822 386 LRLRSNYFNGTIPPELCKLPALHILDLSHNNLS 418 (497)
Q Consensus 386 L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~ 418 (497)
|+++.|.+. ..|..+..+.++-.|+..+|.+.
T Consensus 105 lNl~~N~l~-~~p~vi~~L~~l~~Lds~~na~~ 136 (177)
T KOG4579|consen 105 LNLRFNPLN-AEPRVIAPLIKLDMLDSPENARA 136 (177)
T ss_pred cccccCccc-cchHHHHHHHhHHHhcCCCCccc
Confidence 555555555 34444444555555555555544
No 61
>KOG3665 consensus ZYG-1-like serine/threonine protein kinases [General function prediction only]
Probab=97.78 E-value=4.7e-06 Score=85.18 Aligned_cols=153 Identities=21% Similarity=0.237 Sum_probs=89.9
Q ss_pred ccceEecccCc-ccccCChhhhcCCCCccEEEcccCcceec-ccccccCcCCccEEEeecceeecccCcccccCCCCCEE
Q 037822 236 NVTKLYLRDNS-FSGPIPRDFGQKIPFLTDLDISFNSLNGS-VSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYIL 313 (497)
Q Consensus 236 ~L~~L~l~~~~-~~~~~~~~~~~~~~~L~~L~l~~~~i~~~-~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L 313 (497)
+|+.|++++.. +....+..++..+|.|++|.+.+-.+... ......++|+|..|++|+.+++.. .+++.+++|+.|
T Consensus 123 nL~~LdI~G~~~~s~~W~~kig~~LPsL~sL~i~~~~~~~~dF~~lc~sFpNL~sLDIS~TnI~nl--~GIS~LknLq~L 200 (699)
T KOG3665|consen 123 NLQHLDISGSELFSNGWPKKIGTMLPSLRSLVISGRQFDNDDFSQLCASFPNLRSLDISGTNISNL--SGISRLKNLQVL 200 (699)
T ss_pred hhhhcCccccchhhccHHHHHhhhCcccceEEecCceecchhHHHHhhccCccceeecCCCCccCc--HHHhccccHHHH
Confidence 56666665542 22234445556677777777777655422 223445677777777777776622 556777777777
Q ss_pred ECccCcccc-cCCcccccccCCcEEEeecceeeeeC------CcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEE
Q 037822 314 DMSNNSLSG-EIPESIGSLLSVRFLILCNNHISGEV------PPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSIL 386 (497)
Q Consensus 314 ~l~~n~i~~-~~~~~l~~~~~L~~L~l~~~~~~~~~------~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L 386 (497)
.+.+=.+.. ..-..+..+++|+.||++........ .+.-..+|.|+.||.++..+.+.+.+.+...-++|+.+
T Consensus 201 ~mrnLe~e~~~~l~~LF~L~~L~vLDIS~~~~~~~~~ii~qYlec~~~LpeLrfLDcSgTdi~~~~le~ll~sH~~L~~i 280 (699)
T KOG3665|consen 201 SMRNLEFESYQDLIDLFNLKKLRVLDISRDKNNDDTKIIEQYLECGMVLPELRFLDCSGTDINEEILEELLNSHPNLQQI 280 (699)
T ss_pred hccCCCCCchhhHHHHhcccCCCeeeccccccccchHHHHHHHHhcccCccccEEecCCcchhHHHHHHHHHhCccHhhh
Confidence 776655542 11234556777777777765443111 11223467777777777777766666555555666666
Q ss_pred EccC
Q 037822 387 RLRS 390 (497)
Q Consensus 387 ~l~~ 390 (497)
..-+
T Consensus 281 ~~~~ 284 (699)
T KOG3665|consen 281 AALD 284 (699)
T ss_pred hhhh
Confidence 5544
No 62
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.77 E-value=7.1e-05 Score=60.08 Aligned_cols=121 Identities=16% Similarity=0.227 Sum_probs=38.1
Q ss_pred cccCCCCCEEECccCcccccCCcccccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCC
Q 037822 304 WSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSL 383 (497)
Q Consensus 304 ~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L 383 (497)
|.++++|+.+.+.. .+......+|..+++|+.+.+..+ +.......|..+++++.+.+.+ .+. .++...+..++++
T Consensus 8 F~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~-~i~~~~F~~~~~l 83 (129)
T PF13306_consen 8 FYNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLK-SIGDNAFSNCTNL 83 (129)
T ss_dssp TTT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT--EE-TTTTTT-TTE
T ss_pred HhCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-ccc-ccccccccccccc
Confidence 33444444444432 233233334444444444444432 2222233444444455555433 222 2333333334555
Q ss_pred CEEEccCcccccCCCcccCCCCCCCEEEccCCcCcCCCCccccCCCCC
Q 037822 384 SILRLRSNYFNGTIPPELCKLPALHILDLSHNNLSGIIPPCVGNFSGM 431 (497)
Q Consensus 384 ~~L~l~~n~~~~~~~~~l~~l~~L~~L~l~~n~i~~~~~~~l~~l~~L 431 (497)
+.+.+..+ +.......|..+ +|+.+.+.. .+..+....|.+|++|
T Consensus 84 ~~i~~~~~-~~~i~~~~f~~~-~l~~i~~~~-~~~~i~~~~F~~~~~l 128 (129)
T PF13306_consen 84 KNIDIPSN-ITEIGSSSFSNC-NLKEINIPS-NITKIEENAFKNCTKL 128 (129)
T ss_dssp CEEEETTT--BEEHTTTTTT--T--EEE-TT-B-SS----GGG-----
T ss_pred cccccCcc-ccEEchhhhcCC-CceEEEECC-CccEECCccccccccC
Confidence 55555433 221222344554 566665554 3333444455555544
No 63
>PF13306 LRR_5: Leucine rich repeats (6 copies); PDB: 3ZYJ_A 3V47_B 3V44_A 3ZYN_A 3ZYO_A 3SB4_A.
Probab=97.75 E-value=0.00011 Score=58.98 Aligned_cols=81 Identities=15% Similarity=0.144 Sum_probs=28.0
Q ss_pred cCCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcE
Q 037822 257 QKIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRF 336 (497)
Q Consensus 257 ~~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~ 336 (497)
..+++|+.+.+.. .+......+|.++++|+.+.+.++ +.......|..+++++.+.+.+ .+.......|..+++++.
T Consensus 9 ~~~~~l~~i~~~~-~~~~I~~~~F~~~~~l~~i~~~~~-~~~i~~~~F~~~~~l~~i~~~~-~~~~i~~~~F~~~~~l~~ 85 (129)
T PF13306_consen 9 YNCSNLESITFPN-TIKKIGENAFSNCTSLKSINFPNN-LTSIGDNAFSNCKSLESITFPN-NLKSIGDNAFSNCTNLKN 85 (129)
T ss_dssp TT-TT--EEEETS-T--EE-TTTTTT-TT-SEEEESST-TSCE-TTTTTT-TT-EEEEETS-TT-EE-TTTTTT-TTECE
T ss_pred hCCCCCCEEEECC-CeeEeChhhccccccccccccccc-ccccceeeeecccccccccccc-cccccccccccccccccc
Confidence 3444455555443 233333444444445555554442 2222333344444444444433 222222333444444444
Q ss_pred EEee
Q 037822 337 LILC 340 (497)
Q Consensus 337 L~l~ 340 (497)
+.+.
T Consensus 86 i~~~ 89 (129)
T PF13306_consen 86 IDIP 89 (129)
T ss_dssp EEET
T ss_pred cccC
Confidence 4443
No 64
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.71 E-value=1.8e-05 Score=68.57 Aligned_cols=102 Identities=26% Similarity=0.220 Sum_probs=47.6
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCC--cccccCCccccCCCCCCEEECcCCcCcc-cCCccCCCCCCCCEE
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHN--SFVGSIPPSIGNLTFLKELYLSSNQMNG-KFPENFGQLSAVEVL 94 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~--~l~~~~~~~l~~l~~L~~L~l~~n~~~~-~~~~~~~~l~~L~~L 94 (497)
.|..+++.+..++.. ..|..+++|++|.++.| .+...++-....+|+|+++++++|++.. .....+..+.+|..|
T Consensus 44 ~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl~~l~nL~~L 121 (260)
T KOG2739|consen 44 ELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPLKELENLKSL 121 (260)
T ss_pred chhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchhhhhcchhhh
Confidence 444555555554422 23555556666666655 3332233233344566666666665542 111123444555555
Q ss_pred EcCCCccccc--cChhhhhcCCCCceEec
Q 037822 95 DLSENQWEGI--ITETHFRNLSNLKELAL 121 (497)
Q Consensus 95 ~l~~n~l~~~--~~~~~~~~l~~L~~L~l 121 (497)
++..|..+.. .....|..+++|++|+-
T Consensus 122 dl~n~~~~~l~dyre~vf~ll~~L~~LD~ 150 (260)
T KOG2739|consen 122 DLFNCSVTNLDDYREKVFLLLPSLKYLDG 150 (260)
T ss_pred hcccCCccccccHHHHHHHHhhhhccccc
Confidence 5555554331 11134555555555544
No 65
>PRK15386 type III secretion protein GogB; Provisional
Probab=97.55 E-value=0.00021 Score=67.59 Aligned_cols=84 Identities=13% Similarity=0.177 Sum_probs=57.9
Q ss_pred cccccCCcEEEeecceeeeeCCcccccCCCCCEEecCCCcCcccCChhHhhhCCCCCEEEccCc-ccccCCCcccCCCCC
Q 037822 328 IGSLLSVRFLILCNNHISGEVPPSLKNCSMMDSLDLGDNQLSGNIPAWIGESMPSLSILRLRSN-YFNGTIPPELCKLPA 406 (497)
Q Consensus 328 l~~~~~L~~L~l~~~~~~~~~~~~~~~~~~L~~L~l~~~~i~~~~~~~~~~~~~~L~~L~l~~n-~~~~~~~~~l~~l~~ 406 (497)
+..+..++.|++++|.++ .+|. -.++|++|.+++|.-...+|..+ +++|+.|++++| .+. .+| +.
T Consensus 48 ~~~~~~l~~L~Is~c~L~-sLP~---LP~sLtsL~Lsnc~nLtsLP~~L---P~nLe~L~Ls~Cs~L~-sLP------~s 113 (426)
T PRK15386 48 IEEARASGRLYIKDCDIE-SLPV---LPNELTEITIENCNNLTTLPGSI---PEGLEKLTVCHCPEIS-GLP------ES 113 (426)
T ss_pred HHHhcCCCEEEeCCCCCc-ccCC---CCCCCcEEEccCCCCcccCCchh---hhhhhheEccCccccc-ccc------cc
Confidence 445689999999999887 5552 23479999999975444667644 468999999999 443 444 35
Q ss_pred CCEEEccCCcCc--CCCCccc
Q 037822 407 LHILDLSHNNLS--GIIPPCV 425 (497)
Q Consensus 407 L~~L~l~~n~i~--~~~~~~l 425 (497)
|+.|+++.+... ..+|..+
T Consensus 114 Le~L~L~~n~~~~L~~LPssL 134 (426)
T PRK15386 114 VRSLEIKGSATDSIKNVPNGL 134 (426)
T ss_pred cceEEeCCCCCcccccCcchH
Confidence 777787766542 2455444
No 66
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=97.52 E-value=2.3e-06 Score=74.37 Aligned_cols=105 Identities=29% Similarity=0.262 Sum_probs=79.9
Q ss_pred CCCCCCCccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccC-CccCCCCCC
Q 037822 12 ECTNSSLLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKF-PENFGQLSA 90 (497)
Q Consensus 12 ~~~~~~~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~-~~~~~~l~~ 90 (497)
+|+.+.+.++|++.||.+.++ .....++-|++|.|+-|+|+.. ..+..+++|++|+|+.|.|.+.. .+.+.++++
T Consensus 14 K~sdl~~vkKLNcwg~~L~DI--sic~kMp~lEVLsLSvNkIssL--~pl~rCtrLkElYLRkN~I~sldEL~YLknlps 89 (388)
T KOG2123|consen 14 KCSDLENVKKLNCWGCGLDDI--SICEKMPLLEVLSLSVNKISSL--APLQRCTRLKELYLRKNCIESLDELEYLKNLPS 89 (388)
T ss_pred HhhHHHHhhhhcccCCCccHH--HHHHhcccceeEEeeccccccc--hhHHHHHHHHHHHHHhcccccHHHHHHHhcCch
Confidence 355566889999999999855 4467899999999999999854 45788999999999999987421 134688899
Q ss_pred CCEEEcCCCccccccC----hhhhhcCCCCceEe
Q 037822 91 VEVLDLSENQWEGIIT----ETHFRNLSNLKELA 120 (497)
Q Consensus 91 L~~L~l~~n~l~~~~~----~~~~~~l~~L~~L~ 120 (497)
|++|.+..|.=.+... ..++.-+|+|++|+
T Consensus 90 Lr~LWL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 90 LRTLWLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhhHhhccCCcccccchhHHHHHHHHcccchhcc
Confidence 9999998886433221 23677888888886
No 67
>KOG2739 consensus Leucine-rich acidic nuclear protein [Cell cycle control, cell division, chromosome partitioning; General function prediction only]
Probab=97.39 E-value=5.5e-05 Score=65.66 Aligned_cols=90 Identities=26% Similarity=0.285 Sum_probs=63.2
Q ss_pred CCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCC--cCcccCCccCCCCCCCCEEEcCCCccccccChhhh
Q 037822 33 LPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSN--QMNGKFPENFGQLSAVEVLDLSENQWEGIITETHF 110 (497)
Q Consensus 33 ~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n--~~~~~~~~~~~~l~~L~~L~l~~n~l~~~~~~~~~ 110 (497)
+..-...+..|+.|++.+..++.. ..+..+++|++|.++.| .+...++.-...+++|++|++++|++...-....+
T Consensus 35 ~~gl~d~~~~le~ls~~n~gltt~--~~~P~Lp~LkkL~lsdn~~~~~~~l~vl~e~~P~l~~l~ls~Nki~~lstl~pl 112 (260)
T KOG2739|consen 35 LGGLTDEFVELELLSVINVGLTTL--TNFPKLPKLKKLELSDNYRRVSGGLEVLAEKAPNLKVLNLSGNKIKDLSTLRPL 112 (260)
T ss_pred cccccccccchhhhhhhccceeec--ccCCCcchhhhhcccCCcccccccceehhhhCCceeEEeecCCccccccccchh
Confidence 344456677888888888877643 35678999999999999 56655554556679999999999998742212234
Q ss_pred hcCCCCceEeccCc
Q 037822 111 RNLSNLKELALNKQ 124 (497)
Q Consensus 111 ~~l~~L~~L~l~~~ 124 (497)
..+.+|..|++.+|
T Consensus 113 ~~l~nL~~Ldl~n~ 126 (260)
T KOG2739|consen 113 KELENLKSLDLFNC 126 (260)
T ss_pred hhhcchhhhhcccC
Confidence 55556666666654
No 68
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.32 E-value=2.6e-05 Score=78.35 Aligned_cols=15 Identities=33% Similarity=0.237 Sum_probs=8.3
Q ss_pred CCCCCCCEEEccCCc
Q 037822 402 CKLPALHILDLSHNN 416 (497)
Q Consensus 402 ~~l~~L~~L~l~~n~ 416 (497)
..+++++.+.+.++.
T Consensus 359 ~~~~~l~~~~l~~~~ 373 (482)
T KOG1947|consen 359 RSCPKLTDLSLSYCG 373 (482)
T ss_pred hcCCCcchhhhhhhh
Confidence 445555555555555
No 69
>KOG1947 consensus Leucine rich repeat proteins, some proteins contain F-box [General function prediction only]
Probab=97.23 E-value=2.7e-05 Score=78.27 Aligned_cols=229 Identities=19% Similarity=0.102 Sum_probs=92.9
Q ss_pred CCCCccEEEcccCcceec--ccccccCcCCccEEEeecc-eeeccc----CcccccCCCCCEEECccCc-ccccCCcccc
Q 037822 258 KIPFLTDLDISFNSLNGS--VSKSICNLQQLLTLVISNN-NLSGEI----PRLWSNISSLYILDMSNNS-LSGEIPESIG 329 (497)
Q Consensus 258 ~~~~L~~L~l~~~~i~~~--~~~~l~~l~~L~~L~l~~n-~~~~~~----~~~~~~~~~L~~L~l~~n~-i~~~~~~~l~ 329 (497)
..+.++.+.+..+.-... .......++.|+.|+++++ ...... ......+.+|+.++++++. +++..-..+.
T Consensus 186 ~~~~L~~l~l~~~~~~~~~~~~~~~~~~~~L~~L~l~~~~~~~~~~~~~~~~~~~~~~~L~~l~l~~~~~isd~~l~~l~ 265 (482)
T KOG1947|consen 186 SCPLLKRLSLSGCSKITDDSLDALALKCPNLEELDLSGCCLLITLSPLLLLLLLSICRKLKSLDLSGCGLVTDIGLSALA 265 (482)
T ss_pred hCchhhHhhhcccccCChhhHHHHHhhCchhheecccCcccccccchhHhhhhhhhcCCcCccchhhhhccCchhHHHHH
Confidence 456666666666532222 2233445566666666552 111000 1122334555555555554 3322222222
Q ss_pred c-ccCCcEEEeecce-eeeeC-CcccccCCCCCEEecCCCcCc-ccCChhHhhhCCCCCEEEccCcccccCCCcccCCCC
Q 037822 330 S-LLSVRFLILCNNH-ISGEV-PPSLKNCSMMDSLDLGDNQLS-GNIPAWIGESMPSLSILRLRSNYFNGTIPPELCKLP 405 (497)
Q Consensus 330 ~-~~~L~~L~l~~~~-~~~~~-~~~~~~~~~L~~L~l~~~~i~-~~~~~~~~~~~~~L~~L~l~~n~~~~~~~~~l~~l~ 405 (497)
. +++|++|.+.+|. ++... ......++.|++|++++|... +.....+...+++++.+.+.+.. .+.
T Consensus 266 ~~c~~L~~L~l~~c~~lt~~gl~~i~~~~~~L~~L~l~~c~~~~d~~l~~~~~~c~~l~~l~~~~~~----------~c~ 335 (482)
T KOG1947|consen 266 SRCPNLETLSLSNCSNLTDEGLVSIAERCPSLRELDLSGCHGLTDSGLEALLKNCPNLRELKLLSLN----------GCP 335 (482)
T ss_pred hhCCCcceEccCCCCccchhHHHHHHHhcCcccEEeeecCccchHHHHHHHHHhCcchhhhhhhhcC----------CCc
Confidence 1 4455555544443 22111 112233444555555554321 22122222234444443332211 133
Q ss_pred CCCEEEccCCcCc---CCCCccccCCCCCcccCCCCCcccccce-eeeeCcccc------ccccccccCEEEccCCcc-c
Q 037822 406 ALHILDLSHNNLS---GIIPPCVGNFSGMKVEPPDSVKYEGSLQ-VVLKGSEYV------FYTTLYLVNLMDLSSNNL-S 474 (497)
Q Consensus 406 ~L~~L~l~~n~i~---~~~~~~l~~l~~L~~L~l~~~~~~~~~~-~~~~~~~~~------~~~~~~~L~~L~l~~n~~-~ 474 (497)
.++.+.+.+..-. ....-.+..++.++.+.+..+....... ....+-... .......++.|+++.+.. +
T Consensus 336 ~l~~~~l~~~~~~~~d~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~l~gc~~l~~~l~~~~~~~~~l~~L~l~~~~~~t 415 (482)
T KOG1947|consen 336 SLTDLSLSGLLTLTSDDLAELILRSCPKLTDLSLSYCGISDLGLELSLRGCPNLTESLELRLCRSDSLRVLNLSDCRLVT 415 (482)
T ss_pred cHHHHHHHHhhccCchhHhHHHHhcCCCcchhhhhhhhccCcchHHHhcCCcccchHHHHHhccCCccceEecccCcccc
Confidence 3333333333221 1122235677777777777776332221 111111100 111111256666666643 3
Q ss_pred ccCChhhhc-cCCCCeEECCCCC
Q 037822 475 GEMPVELTR-LIHLGTLNLSRNH 496 (497)
Q Consensus 475 ~~~~~~l~~-l~~L~~l~l~~n~ 496 (497)
...-..... +..++.+++++++
T Consensus 416 ~~~l~~~~~~~~~~~~l~~~~~~ 438 (482)
T KOG1947|consen 416 DKGLRCLADSCSNLKDLDLSGCR 438 (482)
T ss_pred ccchHHHhhhhhccccCCccCcc
Confidence 333333333 5556666666553
No 70
>KOG2123 consensus Uncharacterized conserved protein [Function unknown]
Probab=96.83 E-value=3.8e-05 Score=67.02 Aligned_cols=101 Identities=22% Similarity=0.214 Sum_probs=64.8
Q ss_pred cCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEEEeecceeeeeC-CcccccCCCCCEE
Q 037822 283 LQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFLILCNNHISGEV-PPSLKNCSMMDSL 361 (497)
Q Consensus 283 l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~~~~~~~-~~~~~~~~~L~~L 361 (497)
+.++++|++++|.+.. ......++.|++|.++-|.|+... .+..|++|++|.|..|.|.... ...+.++|+|++|
T Consensus 18 l~~vkKLNcwg~~L~D--Isic~kMp~lEVLsLSvNkIssL~--pl~rCtrLkElYLRkN~I~sldEL~YLknlpsLr~L 93 (388)
T KOG2123|consen 18 LENVKKLNCWGCGLDD--ISICEKMPLLEVLSLSVNKISSLA--PLQRCTRLKELYLRKNCIESLDELEYLKNLPSLRTL 93 (388)
T ss_pred HHHhhhhcccCCCccH--HHHHHhcccceeEEeeccccccch--hHHHHHHHHHHHHHhcccccHHHHHHHhcCchhhhH
Confidence 4567788888887762 234566788888888888876433 3677778888888887775221 1245667777777
Q ss_pred ecCCCcCcccCCh----hHhhhCCCCCEEE
Q 037822 362 DLGDNQLSGNIPA----WIGESMPSLSILR 387 (497)
Q Consensus 362 ~l~~~~i~~~~~~----~~~~~~~~L~~L~ 387 (497)
-+..|+-.+..+. .+...+|+|++||
T Consensus 94 WL~ENPCc~~ag~nYR~~VLR~LPnLkKLD 123 (388)
T KOG2123|consen 94 WLDENPCCGEAGQNYRRKVLRVLPNLKKLD 123 (388)
T ss_pred hhccCCcccccchhHHHHHHHHcccchhcc
Confidence 7777765544433 2233366666665
No 71
>PF00560 LRR_1: Leucine Rich Repeat; InterPro: IPR001611 Leucine-rich repeats (LRR) consist of 2-45 motifs of 20-30 amino acids in length that generally folds into an arc or horseshoe shape []. LRRs occur in proteins ranging from viruses to eukaryotes, and appear to provide a structural framework for the formation of protein-protein interactions [, ].Proteins containing LRRs include tyrosine kinase receptors, cell-adhesion molecules, virulence factors, and extracellular matrix-binding glycoproteins, and are involved in a variety of biological processes, including signal transduction, cell adhesion, DNA repair, recombination, transcription, RNA processing, disease resistance, apoptosis, and the immune response []. Sequence analyses of LRR proteins suggested the existence of several different subfamilies of LRRs. The significance of this classification is that repeats from different subfamilies never occur simultaneously and have most probably evolved independently. It is, however, now clear that all major classes of LRR have curved horseshoe structures with a parallel beta sheet on the concave side and mostly helical elements on the convex side. At least six families of LRR proteins, characterised by different lengths and consensus sequences of the repeats, have been identified. Eleven-residue segments of the LRRs (LxxLxLxxN/CxL), corresponding to the beta-strand and adjacent loop regions, are conserved in LRR proteins, whereas the remaining parts of the repeats (herein termed variable) may be very different. Despite the differences, each of the variable parts contains two half-turns at both ends and a "linear" segment (as the chain follows a linear path overall), usually formed by a helix, in the middle. The concave face and the adjacent loops are the most common protein interaction surfaces on LRR proteins. 3D structure of some LRR proteins-ligand complexes show that the concave surface of LRR domain is ideal for interaction with alpha-helix, thus supporting earlier conclusions that the elongated and curved LRR structure provides an outstanding framework for achieving diverse protein-protein interactions []. Molecular modeling suggests that the conserved pattern LxxLxL, which is shorter than the previously proposed LxxLxLxxN/CxL is sufficient to impart the characteristic horseshoe curvature to proteins with 20- to 30-residue repeats []. ; GO: 0005515 protein binding; PDB: 4ECO_B 2A0Z_A 3ULU_A 1ZIW_A 3ULV_A 1DCE_C 1LTX_A 3J0A_B 3A79_B 4FCG_A ....
Probab=95.51 E-value=0.0066 Score=31.22 Aligned_cols=22 Identities=36% Similarity=0.670 Sum_probs=16.8
Q ss_pred ccCEEEccCCcccccCChhhhcc
Q 037822 462 LVNLMDLSSNNLSGEMPVELTRL 484 (497)
Q Consensus 462 ~L~~L~l~~n~~~~~~~~~l~~l 484 (497)
+|+.||+++|.++ .+|..|.+|
T Consensus 1 ~L~~Ldls~n~l~-~ip~~~~~l 22 (22)
T PF00560_consen 1 NLEYLDLSGNNLT-SIPSSFSNL 22 (22)
T ss_dssp TESEEEETSSEES-EEGTTTTT-
T ss_pred CccEEECCCCcCE-eCChhhcCC
Confidence 4789999999999 666667653
No 72
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.83 E-value=0.0016 Score=54.40 Aligned_cols=33 Identities=30% Similarity=0.286 Sum_probs=13.9
Q ss_pred CCEEECccCcccccCCcccccccCCcEEEeecc
Q 037822 310 LYILDMSNNSLSGEIPESIGSLLSVRFLILCNN 342 (497)
Q Consensus 310 L~~L~l~~n~i~~~~~~~l~~~~~L~~L~l~~~ 342 (497)
++.++-+++.|..+.-+.+..+++++.|.+.+|
T Consensus 103 IeaVDAsds~I~~eGle~L~~l~~i~~l~l~~c 135 (221)
T KOG3864|consen 103 IEAVDASDSSIMYEGLEHLRDLRSIKSLSLANC 135 (221)
T ss_pred EEEEecCCchHHHHHHHHHhccchhhhheeccc
Confidence 444444444444333333344444444444433
No 73
>KOG3864 consensus Uncharacterized conserved protein [Function unknown]
Probab=94.30 E-value=0.0052 Score=51.49 Aligned_cols=35 Identities=23% Similarity=0.172 Sum_probs=27.7
Q ss_pred ccccCEEEccCC-cccccCChhhhccCCCCeEECCC
Q 037822 460 LYLVNLMDLSSN-NLSGEMPVELTRLIHLGTLNLSR 494 (497)
Q Consensus 460 ~~~L~~L~l~~n-~~~~~~~~~l~~l~~L~~l~l~~ 494 (497)
.++|+.|+|++| .||+..-..+.++++|+.|.|.+
T Consensus 150 ~~~L~~L~lsgC~rIT~~GL~~L~~lknLr~L~l~~ 185 (221)
T KOG3864|consen 150 APSLQDLDLSGCPRITDGGLACLLKLKNLRRLHLYD 185 (221)
T ss_pred ccchheeeccCCCeechhHHHHHHHhhhhHHHHhcC
Confidence 578888999988 77777777788888888887754
No 74
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=94.08 E-value=0.00019 Score=70.36 Aligned_cols=88 Identities=24% Similarity=0.241 Sum_probs=37.5
Q ss_pred ccCCcEEEeecceeeee----CCcccccCCC-CCEEecCCCcCcccCChhHhhh---C-CCCCEEEccCcccccCC----
Q 037822 331 LLSVRFLILCNNHISGE----VPPSLKNCSM-MDSLDLGDNQLSGNIPAWIGES---M-PSLSILRLRSNYFNGTI---- 397 (497)
Q Consensus 331 ~~~L~~L~l~~~~~~~~----~~~~~~~~~~-L~~L~l~~~~i~~~~~~~~~~~---~-~~L~~L~l~~n~~~~~~---- 397 (497)
..++++|.+.+|.++.. +...+...++ +..++++.|.+.+......... + ..++.++++.|.++...
T Consensus 203 ~~~le~L~L~~~~~t~~~c~~l~~~l~~~~~~~~el~l~~n~l~d~g~~~L~~~l~~~~~~l~~l~l~~nsi~~~~~~~L 282 (478)
T KOG4308|consen 203 LSSLETLKLSRCGVTSSSCALLDEVLASGESLLRELDLASNKLGDVGVEKLLPCLSVLSETLRVLDLSRNSITEKGVRDL 282 (478)
T ss_pred cccHHHHhhhhcCcChHHHHHHHHHHhccchhhHHHHHHhcCcchHHHHHHHHHhcccchhhhhhhhhcCCccccchHHH
Confidence 34455555555554311 1112222333 4445555555543322222111 1 23455555555555321
Q ss_pred CcccCCCCCCCEEEccCCcCc
Q 037822 398 PPELCKLPALHILDLSHNNLS 418 (497)
Q Consensus 398 ~~~l~~l~~L~~L~l~~n~i~ 418 (497)
...+..++.++++.++.|++.
T Consensus 283 ~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 283 AEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred HHHHhhhHHHHHhhcccCccc
Confidence 223344455555555555554
No 75
>KOG4308 consensus LRR-containing protein [Function unknown]
Probab=93.34 E-value=0.00038 Score=68.30 Aligned_cols=34 Identities=24% Similarity=0.155 Sum_probs=19.7
Q ss_pred CCCEEEccCCccccCCCCC-------ccccceEecccCccc
Q 037822 215 FPATVDLSSNSFEGPLPLW-------SFNVTKLYLRDNSFS 248 (497)
Q Consensus 215 ~l~~l~l~~~~~~~~~~~~-------~~~L~~L~l~~~~~~ 248 (497)
.++.+++..|.+++..... ++.++.+.+..|.+.
T Consensus 263 ~l~~l~l~~nsi~~~~~~~L~~~l~~~~~l~~l~l~~n~l~ 303 (478)
T KOG4308|consen 263 TLRVLDLSRNSITEKGVRDLAEVLVSCRQLEELSLSNNPLT 303 (478)
T ss_pred hhhhhhhhcCCccccchHHHHHHHhhhHHHHHhhcccCccc
Confidence 4456666666665433222 236777777777665
No 76
>PF13516 LRR_6: Leucine Rich repeat; PDB: 3RGZ_A 3RJ0_A 3RIZ_A 3RGX_A 1DFJ_I 2BNH_A 3VQ1_A 3VQ2_A 2Z64_A 2OMX_A ....
Probab=92.55 E-value=0.039 Score=29.01 Aligned_cols=23 Identities=26% Similarity=0.288 Sum_probs=14.9
Q ss_pred ccccCEEEccCCcccccCChhhh
Q 037822 460 LYLVNLMDLSSNNLSGEMPVELT 482 (497)
Q Consensus 460 ~~~L~~L~l~~n~~~~~~~~~l~ 482 (497)
+++|++|+|++|.|++..+..|+
T Consensus 1 ~~~L~~L~l~~n~i~~~g~~~l~ 23 (24)
T PF13516_consen 1 NPNLETLDLSNNQITDEGASALA 23 (24)
T ss_dssp -TT-SEEE-TSSBEHHHHHHHHH
T ss_pred CCCCCEEEccCCcCCHHHHHHhC
Confidence 35788899999999876655443
No 77
>PF13504 LRR_7: Leucine rich repeat; PDB: 3OJA_B 3G06_A 1OOK_G 1QYY_G 1SQ0_B 1P9A_G 1GWB_A 1P8V_A 1M0Z_A 1U0N_D ....
Probab=92.50 E-value=0.08 Score=25.14 Aligned_cols=10 Identities=50% Similarity=0.674 Sum_probs=3.2
Q ss_pred CCEEECcCCc
Q 037822 67 LKELYLSSNQ 76 (497)
Q Consensus 67 L~~L~l~~n~ 76 (497)
|+.|++++|+
T Consensus 3 L~~L~l~~n~ 12 (17)
T PF13504_consen 3 LRTLDLSNNR 12 (17)
T ss_dssp -SEEEETSS-
T ss_pred cCEEECCCCC
Confidence 3333333333
No 78
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=90.05 E-value=0.23 Score=26.56 Aligned_cols=22 Identities=36% Similarity=0.365 Sum_probs=16.4
Q ss_pred ccccCEEEccCCcccccCChhh
Q 037822 460 LYLVNLMDLSSNNLSGEMPVEL 481 (497)
Q Consensus 460 ~~~L~~L~l~~n~~~~~~~~~l 481 (497)
+++|++|+|++|.++...++.|
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00369 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 3578999999999985544444
No 79
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=90.05 E-value=0.23 Score=26.56 Aligned_cols=22 Identities=36% Similarity=0.365 Sum_probs=16.4
Q ss_pred ccccCEEEccCCcccccCChhh
Q 037822 460 LYLVNLMDLSSNNLSGEMPVEL 481 (497)
Q Consensus 460 ~~~L~~L~l~~n~~~~~~~~~l 481 (497)
+++|++|+|++|.++...++.|
T Consensus 1 L~~L~~L~L~~N~l~~lp~~~f 22 (26)
T smart00370 1 LPNLRELDLSNNQLSSLPPGAF 22 (26)
T ss_pred CCCCCEEECCCCcCCcCCHHHc
Confidence 3578999999999985544444
No 80
>smart00370 LRR Leucine-rich repeats, outliers.
Probab=89.67 E-value=0.28 Score=26.21 Aligned_cols=13 Identities=54% Similarity=0.659 Sum_probs=5.3
Q ss_pred CCCEEECcCCcCc
Q 037822 66 FLKELYLSSNQMN 78 (497)
Q Consensus 66 ~L~~L~l~~n~~~ 78 (497)
+|++|++++|.++
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00370 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444443
No 81
>smart00369 LRR_TYP Leucine-rich repeats, typical (most populated) subfamily.
Probab=89.67 E-value=0.28 Score=26.21 Aligned_cols=13 Identities=54% Similarity=0.659 Sum_probs=5.3
Q ss_pred CCCEEECcCCcCc
Q 037822 66 FLKELYLSSNQMN 78 (497)
Q Consensus 66 ~L~~L~l~~n~~~ 78 (497)
+|++|++++|.++
T Consensus 3 ~L~~L~L~~N~l~ 15 (26)
T smart00369 3 NLRELDLSNNQLS 15 (26)
T ss_pred CCCEEECCCCcCC
Confidence 3444444444443
No 82
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=89.08 E-value=0.0092 Score=51.15 Aligned_cols=81 Identities=15% Similarity=0.124 Sum_probs=43.5
Q ss_pred CccEEEcCCCCCcccCCccccCCCCCCEEECCCCcccccCCccccCCCCCCEEECcCCcCcccCCccCCCCCCCCEEEcC
Q 037822 18 LLEKLELGFNQLNGDLPSSLGYLKNLRYLELWHNSFVGSIPPSIGNLTFLKELYLSSNQMNGKFPENFGQLSAVEVLDLS 97 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~l~~L~~L~l~~~~l~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~l~~L~~L~l~ 97 (497)
..+.||++.|++... -..|+.+..+..||++.|.+. ..|..+....+++.++.+.|+.. ..|..+++.++++.++.-
T Consensus 43 r~tvld~~s~r~vn~-~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~e~k 119 (326)
T KOG0473|consen 43 RVTVLDLSSNRLVNL-GKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKNEQK 119 (326)
T ss_pred eeeeehhhhhHHHhh-ccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchhhhc
Confidence 555555555555422 233555555555555555554 45555555555555555555554 455555555555555555
Q ss_pred CCcc
Q 037822 98 ENQW 101 (497)
Q Consensus 98 ~n~l 101 (497)
++.+
T Consensus 120 ~~~~ 123 (326)
T KOG0473|consen 120 KTEF 123 (326)
T ss_pred cCcc
Confidence 5543
No 83
>KOG0473 consensus Leucine-rich repeat protein [Function unknown]
Probab=80.11 E-value=0.042 Score=47.27 Aligned_cols=84 Identities=20% Similarity=0.148 Sum_probs=44.2
Q ss_pred CCCCccEEEcccCcceecccccccCcCCccEEEeecceeecccCcccccCCCCCEEECccCcccccCCcccccccCCcEE
Q 037822 258 KIPFLTDLDISFNSLNGSVSKSICNLQQLLTLVISNNNLSGEIPRLWSNISSLYILDMSNNSLSGEIPESIGSLLSVRFL 337 (497)
Q Consensus 258 ~~~~L~~L~l~~~~i~~~~~~~l~~l~~L~~L~l~~n~~~~~~~~~~~~~~~L~~L~l~~n~i~~~~~~~l~~~~~L~~L 337 (497)
.+...+.||++.|.+. ..-..++.++.+..|+++.|.+. ..|..+.....++.++...|... ..|.+++..+.++++
T Consensus 40 ~~kr~tvld~~s~r~v-n~~~n~s~~t~~~rl~~sknq~~-~~~~d~~q~~e~~~~~~~~n~~~-~~p~s~~k~~~~k~~ 116 (326)
T KOG0473|consen 40 SFKRVTVLDLSSNRLV-NLGKNFSILTRLVRLDLSKNQIK-FLPKDAKQQRETVNAASHKNNHS-QQPKSQKKEPHPKKN 116 (326)
T ss_pred ccceeeeehhhhhHHH-hhccchHHHHHHHHHhccHhhHh-hChhhHHHHHHHHHHHhhccchh-hCCccccccCCcchh
Confidence 4455555666555543 22223444455555556555554 45555555555555555555544 455555556666666
Q ss_pred Eeeccee
Q 037822 338 ILCNNHI 344 (497)
Q Consensus 338 ~l~~~~~ 344 (497)
+..++.+
T Consensus 117 e~k~~~~ 123 (326)
T KOG0473|consen 117 EQKKTEF 123 (326)
T ss_pred hhccCcc
Confidence 6555554
No 84
>smart00368 LRR_RI Leucine rich repeat, ribonuclease inhibitor type.
Probab=75.95 E-value=1.9 Score=23.52 Aligned_cols=16 Identities=31% Similarity=0.578 Sum_probs=8.9
Q ss_pred CCCCEEecCCCcCccc
Q 037822 356 SMMDSLDLGDNQLSGN 371 (497)
Q Consensus 356 ~~L~~L~l~~~~i~~~ 371 (497)
++|++|++++|.+.+.
T Consensus 2 ~~L~~LdL~~N~i~~~ 17 (28)
T smart00368 2 PSLRELDLSNNKLGDE 17 (28)
T ss_pred CccCEEECCCCCCCHH
Confidence 3556666666655543
No 85
>smart00365 LRR_SD22 Leucine-rich repeat, SDS22-like subfamily.
Probab=71.88 E-value=3.7 Score=22.00 Aligned_cols=14 Identities=43% Similarity=0.620 Sum_probs=7.1
Q ss_pred CCCCEEEcCCCccc
Q 037822 89 SAVEVLDLSENQWE 102 (497)
Q Consensus 89 ~~L~~L~l~~n~l~ 102 (497)
.+|++|++++|+|+
T Consensus 2 ~~L~~L~L~~NkI~ 15 (26)
T smart00365 2 TNLEELDLSQNKIK 15 (26)
T ss_pred CccCEEECCCCccc
Confidence 34555555555543
No 86
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=67.00 E-value=13 Score=36.05 Aligned_cols=15 Identities=33% Similarity=0.448 Sum_probs=9.0
Q ss_pred CCCEEEccCCcCcCC
Q 037822 406 ALHILDLSHNNLSGI 420 (497)
Q Consensus 406 ~L~~L~l~~n~i~~~ 420 (497)
.++++..++|...+.
T Consensus 355 R~q~l~~rdnnldge 369 (553)
T KOG4242|consen 355 RVQVLLQRDNNLDGE 369 (553)
T ss_pred eeeEeeccccccccc
Confidence 366666666666544
No 87
>smart00364 LRR_BAC Leucine-rich repeats, bacterial type.
Probab=64.58 E-value=5.1 Score=21.46 Aligned_cols=13 Identities=54% Similarity=0.649 Sum_probs=6.2
Q ss_pred CCCEEECcCCcCc
Q 037822 66 FLKELYLSSNQMN 78 (497)
Q Consensus 66 ~L~~L~l~~n~~~ 78 (497)
+|++|++++|+++
T Consensus 3 ~L~~L~vs~N~Lt 15 (26)
T smart00364 3 SLKELNVSNNQLT 15 (26)
T ss_pred ccceeecCCCccc
Confidence 3444455555444
No 88
>smart00367 LRR_CC Leucine-rich repeat - CC (cysteine-containing) subfamily.
Probab=59.60 E-value=6.7 Score=20.78 Aligned_cols=13 Identities=31% Similarity=0.240 Sum_probs=8.5
Q ss_pred cCCCCeEECCCCC
Q 037822 484 LIHLGTLNLSRNH 496 (497)
Q Consensus 484 l~~L~~l~l~~n~ 496 (497)
+++|++|+|++|+
T Consensus 1 c~~L~~L~l~~C~ 13 (26)
T smart00367 1 CPNLRELDLSGCT 13 (26)
T ss_pred CCCCCEeCCCCCC
Confidence 3567777777764
No 89
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=59.20 E-value=5.3 Score=39.48 Aligned_cols=36 Identities=33% Similarity=0.456 Sum_probs=16.1
Q ss_pred cCCccEEEeecceeec--ccCcccccCCCCCEEECccC
Q 037822 283 LQQLLTLVISNNNLSG--EIPRLWSNISSLYILDMSNN 318 (497)
Q Consensus 283 l~~L~~L~l~~n~~~~--~~~~~~~~~~~L~~L~l~~n 318 (497)
.+.+..+++++|++.. .+...-...|+|..|+|++|
T Consensus 217 ~p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 217 FPEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred CcceeeeecccchhhchhhhhHHHHhcchhheeecccc
Confidence 3455555555555431 11111123355555555555
No 90
>KOG4242 consensus Predicted myosin-I-binding protein [Cell motility]
Probab=44.20 E-value=1.1e+02 Score=30.07 Aligned_cols=84 Identities=21% Similarity=0.106 Sum_probs=52.0
Q ss_pred CccEEEcCCCCCcccCCccccC---CCCCCEEECCCCccccc---CCccccCCCCCCEEECcCCcCcc----cCC----c
Q 037822 18 LLEKLELGFNQLNGDLPSSLGY---LKNLRYLELWHNSFVGS---IPPSIGNLTFLKELYLSSNQMNG----KFP----E 83 (497)
Q Consensus 18 ~L~~L~l~~~~i~~~~~~~~~~---l~~L~~L~l~~~~l~~~---~~~~l~~l~~L~~L~l~~n~~~~----~~~----~ 83 (497)
.+.+++++.|...+.+|..+.. -.-+++++.+...+.-. .+-....-++|+..+++.|.... .++ +
T Consensus 215 ~lteldls~n~~Kddip~~~n~~a~~~vl~~ld~s~tgirlD~l~~~l~~g~~tkl~~~kls~ng~s~skg~Egg~~~k~ 294 (553)
T KOG4242|consen 215 WLTELDLSTNGGKDDIPRTLNKKAGTLVLFKLDRSTTGIRLDLLTSPLAAGRTTKLTFGKLSRNGTSPSKGEEGGGAEKD 294 (553)
T ss_pred cccccccccCCCCccchhHHHHhhhhhhhhcccccccccchhhcccccccccccccchhhhccCCCCccccccccccccc
Confidence 5788889888777666654432 34677888877766421 23334556788888888775431 222 2
Q ss_pred cCCCCCCCCEEEcCCCccc
Q 037822 84 NFGQLSAVEVLDLSENQWE 102 (497)
Q Consensus 84 ~~~~l~~L~~L~l~~n~l~ 102 (497)
.|..-.++ +|++..+...
T Consensus 295 ~fS~~~sg-hln~~~~~~p 312 (553)
T KOG4242|consen 295 TFSPDPSG-HLNSRPRYTP 312 (553)
T ss_pred ccCcCccc-ccccccccCc
Confidence 23444566 8888777643
No 91
>KOG3763 consensus mRNA export factor TAP/MEX67 [RNA processing and modification]
Probab=39.31 E-value=20 Score=35.63 Aligned_cols=35 Identities=23% Similarity=0.248 Sum_probs=14.7
Q ss_pred cCCcEEEeecceeeee--CCcccccCCCCCEEecCCC
Q 037822 332 LSVRFLILCNNHISGE--VPPSLKNCSMMDSLDLGDN 366 (497)
Q Consensus 332 ~~L~~L~l~~~~~~~~--~~~~~~~~~~L~~L~l~~~ 366 (497)
+.+..+.+++|.+-.. +...-...|+|.+|+|++|
T Consensus 218 p~i~sl~lsnNrL~~Ld~~sslsq~apklk~L~LS~N 254 (585)
T KOG3763|consen 218 PEILSLSLSNNRLYHLDALSSLSQIAPKLKTLDLSHN 254 (585)
T ss_pred cceeeeecccchhhchhhhhHHHHhcchhheeecccc
Confidence 4444455555544211 1111123445555555555
Done!