BLAST Results

Query Summary

Your job contains 1 sequence.

Parameters
Threshold: 0.001
Maximum number of alignments shown: 100
BLAST filter: on

Query Sequence

>037826
KDKLYHVLFCLTLTFFFSAWASVSRYSFIRTHSIRVGSILSLLAGAAKEAADQLGLFPSA
GASFKDAIADVIGVLIASSALSLWRICSSSRHGSDSGRTRRVLPV

High Scoring Gene Products

Symbol, full name Information P value
AT1G15900 protein from Arabidopsis thaliana 7.3e-27

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Raw Blast Data

BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]

Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.

Reference:  Gish, W. (1996-2006) http://blast.wustl.edu

Query=  037826
        (105 letters)

Database:  go_20130330-seqdb.fasta
           368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done

                                                                     Smallest
                                                                       Sum
                                                              High  Probability
Sequences producing High-scoring Segment Pairs:              Score  P(N)      N

TAIR|locus:2036219 - symbol:AT1G15900 "AT1G15900" species...   302  7.3e-27   1


>TAIR|locus:2036219 [details] [associations]
            symbol:AT1G15900 "AT1G15900" species:3702 "Arabidopsis
            thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0005739
            "mitochondrion" evidence=ISM] [GO:0008150 "biological_process"
            evidence=ND] EMBL:CP002684 GenomeReviews:CT485782_GR EMBL:AC034256
            IPI:IPI00539593 RefSeq:NP_173042.1 UniGene:At.51626
            EnsemblPlants:AT1G15900.1 GeneID:838160 KEGG:ath:AT1G15900
            TAIR:At1g15900 eggNOG:NOG244869 HOGENOM:HOG000131776
            InParanoid:Q3EDB5 OMA:WIGSAFS PhylomeDB:Q3EDB5
            ProtClustDB:CLSN2679522 Genevestigator:Q3EDB5 Uniprot:Q3EDB5
        Length = 113

 Score = 302 (111.4 bits), Expect = 7.3e-27, P = 7.3e-27
 Identities = 62/105 (59%), Positives = 78/105 (74%)

Query:     1 KDKLYHVLFCLTLTFFFSAWASVSRYSFIRTHSIRVGSILSLLAGAAKEAADQLGLFPSA 60
             +DKLYHV+FC +++  FS  AS SRYSF+R HSI +GS  SL AGAAKEAADQ+G+FPSA
Sbjct:    17 RDKLYHVIFCFSISLIFSTLASFSRYSFLRRHSIWIGSAFSLAAGAAKEAADQIGIFPSA 76

Query:    61 GASFKDAIADVIGVLIASSALSLWRICSSSRHGSDSGRTRRVLPV 105
             GAS +DA+AD IGV+IA+  L LW+    SR      RTR +LP+
Sbjct:    77 GASVRDAVADAIGVVIAALVLLLWK----SRRS----RTRPILPI 113


Parameters:
  V=100
  filter=SEG
  E=0.001

  ctxfactor=1.00

  Query                        -----  As Used  -----    -----  Computed  ----
  Frame  MatID Matrix name     Lambda    K       H      Lambda    K       H
   +0      0   BLOSUM62        0.326   0.135   0.401    same    same    same
               Q=9,R=2         0.244   0.0300  0.180     n/a     n/a     n/a

  Query
  Frame  MatID  Length  Eff.Length     E     S W   T  X   E2     S2
   +0      0      105       105   0.00091  102 3  11 22  0.48    29
                                                     29  0.39    32


Statistics:

  Database:  /share/blast/go-seqdb.fasta
   Title:  go_20130330-seqdb.fasta
   Posted:  5:47:42 AM PDT Apr 1, 2013
   Created:  5:47:42 AM PDT Apr 1, 2013
   Format:  XDF-1
   # of letters in database:  169,044,731
   # of sequences in database:  368,745
   # of database sequences satisfying E:  1
  No. of states in DFA:  535 (57 KB)
  Total size of DFA:  110 KB (2075 KB)
  Time to generate neighborhood:  0.00u 0.00s 0.00t   Elapsed:  00:00:01
  No. of threads or processors used:  24
  Search cpu time:  11.69u 0.07s 11.76t   Elapsed:  00:00:23
  Total cpu time:  11.69u 0.07s 11.76t   Elapsed:  00:00:24
  Start:  Fri May 10 02:01:11 2013   End:  Fri May 10 02:01:35 2013

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