Query 037826
Match_columns 105
No_of_seqs 20 out of 22
Neff 3.0
Searched_HMMs 13730
Date Mon Mar 25 07:29:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037826.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037826hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2e74d2 f.23.12.1 (D:12-45) IS 24.9 39 0.0029 18.1 3.1 21 34-54 11-31 (34)
2 d1u8va1 a.29.3.1 (A:276-490) 4 19.9 1.3E+02 0.0094 20.6 7.6 46 36-83 22-70 (215)
3 d1t33a1 a.4.1.9 (A:1-88) Putat 16.6 54 0.0039 18.6 2.8 35 44-83 18-52 (88)
4 d2v7qi1 a.137.8.1 (I:1-47) Eps 15.9 27 0.002 19.7 1.2 14 55-68 2-15 (47)
5 d1q8ha_ g.32.1.1 (A:) Osteocal 14.8 21 0.0015 19.5 0.5 10 47-56 17-26 (37)
6 d1xrsb2 d.230.4.1 (B:33-84) D- 9.4 78 0.0057 18.2 1.9 16 42-57 15-30 (52)
7 d2g7ga1 a.4.1.9 (A:9-73) Putat 8.6 81 0.0059 17.2 1.7 29 46-80 9-37 (65)
8 d2hkua2 a.121.1.1 (A:88-208) P 8.0 2.8E+02 0.021 18.0 5.1 39 30-71 70-108 (121)
9 d2jn6a1 a.4.1.19 (A:1-89) Unch 7.8 1.6E+02 0.012 16.6 3.0 31 60-92 22-52 (89)
10 d1jb0j_ f.23.18.1 (J:) Subunit 7.7 1.8E+02 0.013 15.8 2.9 17 36-52 15-31 (41)
No 1
>d2e74d2 f.23.12.1 (D:12-45) ISP subunit from the cytochrome b6f complex, transmembrane anchor {Mastigocladus laminosus [TaxId: 83541]}
Probab=24.90 E-value=39 Score=18.06 Aligned_cols=21 Identities=14% Similarity=0.270 Sum_probs=17.4
Q ss_pred HHHHHHHHHHHHHHHHHHHhh
Q 037826 34 IRVGSILSLLAGAAKEAADQL 54 (105)
Q Consensus 34 ~~~G~~~~L~~GaaKE~aD~~ 54 (105)
+++|++-|.+.|+.--++.++
T Consensus 11 ltfgt~tg~alg~lypvvkyf 31 (34)
T d2e74d2 11 LAFGTVTGVALGALYPLVKYF 31 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhhHHHHHHhhhhhHHhhc
Confidence 678999999999988887753
No 2
>d1u8va1 a.29.3.1 (A:276-490) 4-hydroxybutyryl-CoA dehydratase AbfD, C-terminal domain {Clostridium aminobutyricum [TaxId: 33953]}
Probab=19.89 E-value=1.3e+02 Score=20.58 Aligned_cols=46 Identities=22% Similarity=0.222 Sum_probs=33.7
Q ss_pred HHHHH---HHHHHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 037826 36 VGSIL---SLLAGAAKEAADQLGLFPSAGASFKDAIADVIGVLIASSALSL 83 (105)
Q Consensus 36 ~G~~~---~L~~GaaKE~aD~~g~~rs~G~S~kD~~AD~~Gvl~aa~~l~l 83 (105)
.+|-+ =+++|+|..++|..|+-.-. -++|-+++++...=..-++..
T Consensus 22 ~~ck~~~~d~i~Gla~~iae~~G~~~~~--hVqekl~E~i~~~E~~~a~~~ 70 (215)
T d1u8va1 22 GGCKVGVGDVVIGAAALAADYNGAQKAS--HVKDKLIEMTHLNETLYCCGI 70 (215)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTCTTCH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred hhhhHHHHHHHHHHHHHHHHHhCccccc--hHHHHHHHHHHHHHHHHHHHH
Confidence 35544 46899999999999986655 789999999866544444333
No 3
>d1t33a1 a.4.1.9 (A:1-88) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=16.61 E-value=54 Score=18.56 Aligned_cols=35 Identities=29% Similarity=0.334 Sum_probs=25.6
Q ss_pred HHHHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHHHHHHH
Q 037826 44 AGAAKEAADQLGLFPSAGASFKDAIADVIGVLIASSALSL 83 (105)
Q Consensus 44 ~GaaKE~aD~~g~~rs~G~S~kD~~AD~~Gvl~aa~~l~l 83 (105)
.-+|.|+..+-|+ . + +.+| +|+-+||--+++--||
T Consensus 18 l~aa~~l~~~~G~--~-~-t~~~-Ia~~agvs~~~~Y~~F 52 (88)
T d1t33a1 18 IAAALAQFGEYGL--H-A-TTRD-IAALAGQNIAAITYYF 52 (88)
T ss_dssp HHHHHHHHHHHGG--G-S-CHHH-HHHHHTSCHHHHHHHH
T ss_pred HHHHHHHHHHhcc--c-c-CHHH-HHHHhCCChhhhhccC
Confidence 4577888888885 3 3 7876 9999999777765443
No 4
>d2v7qi1 a.137.8.1 (I:1-47) Epsilon subunit of mitochondrial F1F0-ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=15.92 E-value=27 Score=19.75 Aligned_cols=14 Identities=21% Similarity=0.290 Sum_probs=10.8
Q ss_pred CCCCCCCCChHHHH
Q 037826 55 GLFPSAGASFKDAI 68 (105)
Q Consensus 55 g~~rs~G~S~kD~~ 68 (105)
.+||.+|.||---.
T Consensus 2 ayWR~AGlsYi~Ys 15 (47)
T d2v7qi1 2 AYWRQAGLSYIRYS 15 (47)
T ss_dssp CTTTTTTCCHHHHH
T ss_pred hHHHHhhhhHHHHH
Confidence 57999999986543
No 5
>d1q8ha_ g.32.1.1 (A:) Osteocalcin {Pig (Sus scrofa) [TaxId: 9823]}
Probab=14.75 E-value=21 Score=19.50 Aligned_cols=10 Identities=40% Similarity=0.770 Sum_probs=7.7
Q ss_pred HHHHHHhhCC
Q 037826 47 AKEAADQLGL 56 (105)
Q Consensus 47 aKE~aD~~g~ 56 (105)
.-|++||+|+
T Consensus 17 cdelad~igf 26 (37)
T d1q8ha_ 17 CDELADHIGF 26 (37)
T ss_dssp HHHHHHHHCH
T ss_pred HHHHHHHhhH
Confidence 3688998885
No 6
>d1xrsb2 d.230.4.1 (B:33-84) D-lysine 5,6-aminomutase beta subunit KamE, N-terminal domain {Clostridium sticklandii [TaxId: 1511]}
Probab=9.38 E-value=78 Score=18.17 Aligned_cols=16 Identities=44% Similarity=0.326 Sum_probs=13.3
Q ss_pred HHHHHHHHHHHhhCCC
Q 037826 42 LLAGAAKEAADQLGLF 57 (105)
Q Consensus 42 L~~GaaKE~aD~~g~~ 57 (105)
.+-+|||+++..||+=
T Consensus 15 ~A~eAAk~la~kMGl~ 30 (52)
T d1xrsb2 15 RSAEAAKQIALKMGLE 30 (52)
T ss_dssp HHHHHHHHHHHTTSSC
T ss_pred HHHHHHHHHHHHhCCC
Confidence 4678999999999973
No 7
>d2g7ga1 a.4.1.9 (A:9-73) Putative transcriptional regulator Rha04620 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=8.63 E-value=81 Score=17.15 Aligned_cols=29 Identities=31% Similarity=0.319 Sum_probs=19.5
Q ss_pred HHHHHHHhhCCCCCCCCChHHHHHHHHHHHHHHHH
Q 037826 46 AAKEAADQLGLFPSAGASFKDAIADVIGVLIASSA 80 (105)
Q Consensus 46 aaKE~aD~~g~~rs~G~S~kD~~AD~~Gvl~aa~~ 80 (105)
+|.|+.++-| +.|.+| +|+.+||--+++-
T Consensus 9 aa~~l~~~~G-----~~ti~~-Ia~~agvs~~~iY 37 (65)
T d2g7ga1 9 AALELVDRDG-----DFRMPD-LARHLNVQVSSIY 37 (65)
T ss_dssp HHHHHHHHHS-----SCCHHH-HHHHTTSCHHHHH
T ss_pred HHHHHHHHcC-----CCCHHH-HHHHhCccccchh
Confidence 5667777666 567754 6788887766653
No 8
>d2hkua2 a.121.1.1 (A:88-208) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=8.01 E-value=2.8e+02 Score=18.02 Aligned_cols=39 Identities=18% Similarity=0.168 Sum_probs=27.7
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHH
Q 037826 30 RTHSIRVGSILSLLAGAAKEAADQLGLFPSAGASFKDAIADV 71 (105)
Q Consensus 30 rr~~~~~G~~~~L~~GaaKE~aD~~g~~rs~G~S~kD~~AD~ 71 (105)
|-...-.-.+-|.+.|+..|-.- +=+|-|.|+.|++|=+
T Consensus 70 rpidVEsr~FWSaafG~Vlq~~a---~g~sfgysle~avavi 108 (121)
T d2hkua2 70 AGIDVESKAFWSAIFGLVIQKTA---TGESFGYSLEEAVAVI 108 (121)
T ss_dssp SCHHHHHHHHHHHHHHHHHHHHH---TTSCTTCSHHHHHHHH
T ss_pred CCCcHHHHHHHHHHHHHHHHhhh---ccccccccHHHHHHHH
Confidence 33344555667888898887654 4478899999998743
No 9
>d2jn6a1 a.4.1.19 (A:1-89) Uncharacterized protein Cgl2762 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=7.83 E-value=1.6e+02 Score=16.59 Aligned_cols=31 Identities=19% Similarity=0.250 Sum_probs=20.7
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHhhcCCC
Q 037826 60 AGASFKDAIADVIGVLIASSALSLWRICSSSRH 92 (105)
Q Consensus 60 ~G~S~kD~~AD~~Gvl~aa~~l~l~~~~~~~~~ 92 (105)
.|.|+++.+-+ +|| --.++-.|.+.++....
T Consensus 22 ~g~s~~~vA~~-lGI-s~~tl~~W~k~~~~~~~ 52 (89)
T d2jn6a1 22 DGASLQQIAND-LGI-NRVTLKNWIIKYGSNHN 52 (89)
T ss_dssp GGSCHHHHHHH-HTS-CHHHHHHHHHHHCCCST
T ss_pred CCCcHHHHHHH-HCC-CHHHHHHHHHHHhhccc
Confidence 36788885554 488 45667788888766443
No 10
>d1jb0j_ f.23.18.1 (J:) Subunit IX of photosystem I reaction centre, PsaJ {Synechococcus elongatus [TaxId: 32046]}
Probab=7.71 E-value=1.8e+02 Score=15.79 Aligned_cols=17 Identities=18% Similarity=0.167 Sum_probs=12.8
Q ss_pred HHHHHHHHHHHHHHHHH
Q 037826 36 VGSILSLLAGAAKEAAD 52 (105)
Q Consensus 36 ~G~~~~L~~GaaKE~aD 52 (105)
...-+++++|..+|+-.
T Consensus 15 a~~w~~~tAG~lIEiNR 31 (41)
T d1jb0j_ 15 AAIWMTITAGILIEFNR 31 (41)
T ss_dssp HHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHh
Confidence 44446789999999865
Done!