Query 037827
Match_columns 263
No_of_seqs 259 out of 1544
Neff 7.4
Searched_HMMs 29240
Date Mon Mar 25 07:30:15 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037827.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037827hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2xai_A ASB-9, ankyrin repeat a 100.0 6.4E-28 2.2E-32 210.4 13.8 147 33-191 2-162 (261)
2 3d9h_A CDNA FLJ77766, highly s 100.0 1.3E-27 4.3E-32 211.8 15.3 195 27-247 52-264 (285)
3 1oy3_D Transcription factor in 99.9 8.7E-28 3E-32 209.0 12.9 196 29-247 4-267 (282)
4 4b93_B Ankyrin repeat domain-c 99.9 3.6E-28 1.2E-32 214.7 10.6 198 26-246 3-226 (269)
5 2dzn_A Probable 26S proteasome 99.9 4.3E-27 1.5E-31 199.1 15.4 201 34-263 2-228 (228)
6 1k1a_A B-cell lymphoma 3-encod 99.9 5.5E-27 1.9E-31 199.7 14.4 194 29-246 4-224 (241)
7 3b7b_A Euchromatic histone-lys 99.9 6.6E-27 2.3E-31 199.4 13.8 193 29-246 6-218 (237)
8 1yyh_A HN1;, notch 1, ankyrin 99.9 9.9E-28 3.4E-32 208.0 8.8 195 28-246 4-231 (253)
9 1s70_B 130 kDa myosin-binding 99.9 3.9E-27 1.3E-31 207.5 12.7 195 29-247 35-274 (299)
10 3aji_A 26S proteasome non-ATPa 99.9 8.6E-27 3E-31 197.9 13.2 191 32-246 4-213 (231)
11 3utm_A Tankyrase-1; tankyrase, 99.9 1.1E-26 3.9E-31 207.4 14.4 193 29-246 53-321 (351)
12 2xai_A ASB-9, ankyrin repeat a 99.9 7E-25 2.4E-29 191.1 18.3 202 29-260 31-259 (261)
13 1ikn_D Protein (I-kappa-B-alph 99.9 3.7E-26 1.3E-30 195.4 9.4 194 29-246 3-227 (236)
14 1wdy_A 2-5A-dependent ribonucl 99.9 2.6E-25 8.8E-30 192.7 13.6 196 31-246 36-261 (285)
15 4gpm_A Engineered protein OR26 99.9 1.3E-24 4.3E-29 179.8 16.8 145 36-192 6-165 (169)
16 4g8k_A 2-5A-dependent ribonucl 99.9 2E-25 6.7E-30 200.8 12.5 158 31-193 22-236 (337)
17 3utm_A Tankyrase-1; tankyrase, 99.9 6.8E-25 2.3E-29 195.8 14.0 200 26-246 16-288 (351)
18 3ljn_A Hypothetical protein; a 99.9 4.2E-25 1.4E-29 200.6 12.7 192 28-246 14-252 (364)
19 3aji_A 26S proteasome non-ATPa 99.9 1.8E-24 6.2E-29 183.5 15.2 182 29-235 35-231 (231)
20 1n11_A Ankyrin; clathrin, BAND 99.9 4.2E-25 1.4E-29 205.1 12.0 206 29-246 9-253 (437)
21 1wdy_A 2-5A-dependent ribonucl 99.9 1.2E-24 4.2E-29 188.4 13.4 196 31-246 2-227 (285)
22 1n11_A Ankyrin; clathrin, BAND 99.9 9.8E-25 3.3E-29 202.6 13.6 192 30-246 175-385 (437)
23 2f8y_A Notch homolog 1, transl 99.9 2.1E-24 7.2E-29 182.2 12.9 175 30-246 21-199 (223)
24 2vge_A RELA-associated inhibit 99.9 8.8E-25 3E-29 188.4 9.3 186 29-260 16-226 (229)
25 3eu9_A Huntingtin-interacting 99.9 3.2E-24 1.1E-28 181.5 12.1 194 30-246 5-218 (240)
26 2dzn_A Probable 26S proteasome 99.9 1.8E-23 6E-28 176.8 16.6 172 30-209 32-221 (228)
27 3hra_A Ankyrin repeat family p 99.9 1.3E-23 4.5E-28 174.5 14.9 163 32-199 3-181 (201)
28 1k1a_A B-cell lymphoma 3-encod 99.9 3.3E-23 1.1E-27 176.3 16.8 168 29-208 41-228 (241)
29 3v30_A DNA-binding protein rfx 99.9 7.4E-24 2.5E-28 172.6 11.6 160 34-235 2-161 (172)
30 1oy3_D Transcription factor in 99.9 2.1E-23 7.2E-28 181.2 15.1 165 28-203 39-265 (282)
31 2rfa_A Transient receptor pote 99.9 1.2E-23 4E-28 178.8 13.2 184 33-235 2-223 (232)
32 3twr_A Tankyrase-2; ankyrin re 99.9 4.5E-23 1.5E-27 166.8 15.8 148 29-205 3-150 (165)
33 2fo1_E LIN-12 protein; beta-ba 99.9 9.7E-25 3.3E-29 200.3 6.4 210 28-262 118-368 (373)
34 3f6q_A Integrin-linked protein 99.9 6.1E-23 2.1E-27 168.6 15.7 162 32-235 3-164 (179)
35 3kea_A K1L; tropism, ANK repea 99.9 5.5E-24 1.9E-28 188.5 9.2 200 28-246 25-260 (285)
36 4g8k_A 2-5A-dependent ribonucl 99.9 4.8E-23 1.6E-27 185.2 15.4 190 32-246 57-309 (337)
37 3ljn_A Hypothetical protein; a 99.9 9.2E-24 3.1E-28 191.8 9.8 181 29-235 48-270 (364)
38 1ihb_A P18-INK4C(INK6), cyclin 99.9 1.3E-22 4.6E-27 163.1 14.7 145 32-188 3-162 (162)
39 4b93_B Ankyrin repeat domain-c 99.9 8E-23 2.7E-27 180.3 12.9 145 30-204 82-226 (269)
40 3d9h_A CDNA FLJ77766, highly s 99.9 4.8E-22 1.6E-26 175.8 17.3 178 29-235 87-280 (285)
41 2etb_A Transient receptor pote 99.9 1.5E-23 5.3E-28 181.2 7.4 189 33-246 1-229 (256)
42 3kea_A K1L; tropism, ANK repea 99.9 5.1E-23 1.7E-27 182.2 10.1 150 33-194 61-226 (285)
43 2fo1_E LIN-12 protein; beta-ba 99.9 1.5E-22 5E-27 185.8 12.8 161 28-199 160-349 (373)
44 1yyh_A HN1;, notch 1, ankyrin 99.9 1.2E-22 4.2E-27 175.8 11.2 155 30-196 53-223 (253)
45 3b7b_A Euchromatic histone-lys 99.9 8.1E-22 2.8E-26 167.7 15.7 164 29-204 39-218 (237)
46 2rfm_A Putative ankyrin repeat 99.9 2.6E-22 8.9E-27 166.4 12.0 147 28-186 29-190 (192)
47 3v31_A Ankyrin repeat family A 99.9 2.3E-22 7.9E-27 162.9 11.4 160 33-235 2-161 (167)
48 1ycs_B 53BP2, P53BP2; ankyrin 99.9 1.1E-22 3.8E-27 175.3 9.8 172 32-245 3-188 (239)
49 2y1l_E Darpin-8.4; hydrolase-i 99.9 1.7E-21 5.7E-26 158.8 16.2 145 30-186 10-169 (169)
50 2rfa_A Transient receptor pote 99.9 7.9E-22 2.7E-26 167.5 14.3 155 29-192 32-226 (232)
51 2f8y_A Notch homolog 1, transl 99.9 2E-21 6.8E-26 163.8 15.5 152 29-191 53-219 (223)
52 1bi7_B P16INK4A, MTS1, multipl 99.9 2.4E-22 8.1E-27 161.9 9.1 140 29-199 7-147 (156)
53 1bd8_A P19INK4D CDK4/6 inhibit 99.9 2E-21 6.7E-26 155.5 14.2 138 34-184 2-154 (156)
54 4gpm_A Engineered protein OR26 99.9 5.8E-22 2E-26 163.7 11.2 138 76-235 10-162 (169)
55 1d9s_A Cyclin-dependent kinase 99.9 2.9E-22 9.8E-27 157.9 8.8 130 28-188 6-136 (136)
56 2jab_A H10-2-G3; HER2, darpin, 99.9 1.7E-21 5.9E-26 153.4 13.0 128 29-186 9-136 (136)
57 2pnn_A Transient receptor pote 99.9 9.3E-23 3.2E-27 178.1 5.4 198 29-234 8-258 (273)
58 3jxi_A Vanilloid receptor-rela 99.9 1.8E-22 6.1E-27 174.6 7.0 198 31-246 2-233 (260)
59 3eu9_A Huntingtin-interacting 99.9 1.1E-21 3.8E-26 165.8 11.5 182 29-234 37-235 (240)
60 1s70_B 130 kDa myosin-binding 99.9 1.5E-21 5.1E-26 171.7 12.4 166 29-206 68-275 (299)
61 2etb_A Transient receptor pote 99.9 1.9E-22 6.5E-27 174.3 6.1 171 30-235 39-247 (256)
62 1ikn_D Protein (I-kappa-B-alph 99.9 2.3E-21 7.9E-26 165.5 12.6 151 29-190 40-211 (236)
63 1awc_B Protein (GA binding pro 99.9 6.4E-21 2.2E-25 152.6 14.3 136 34-182 2-152 (153)
64 1n0r_A 4ANK, 4 ankyrin repeats 99.9 6.1E-21 2.1E-25 146.1 13.1 126 33-188 1-126 (126)
65 3hra_A Ankyrin repeat family p 99.9 6.6E-21 2.3E-25 158.1 14.1 146 29-186 34-201 (201)
66 3v30_A DNA-binding protein rfx 99.9 2.9E-21 1E-25 157.1 11.3 136 28-193 30-165 (172)
67 2pnn_A Transient receptor pote 99.8 1.8E-21 6.1E-26 169.9 9.7 156 29-192 49-263 (273)
68 4hbd_A KN motif and ankyrin re 99.8 4.5E-21 1.5E-25 169.1 11.5 149 28-186 105-273 (276)
69 1sw6_A Regulatory protein SWI6 99.8 1.2E-21 3.9E-26 176.9 7.7 93 30-126 127-227 (327)
70 3f6q_A Integrin-linked protein 99.8 8.7E-21 3E-25 155.7 11.8 136 29-194 34-169 (179)
71 3jxi_A Vanilloid receptor-rela 99.8 6.6E-21 2.2E-25 164.7 9.2 140 31-192 90-254 (260)
72 3twr_A Tankyrase-2; ankyrin re 99.8 2.7E-20 9.2E-25 150.4 12.1 128 29-187 37-164 (165)
73 3c5r_A BARD-1, BRCA1-associate 99.8 6.4E-21 2.2E-25 149.9 7.9 125 29-183 5-129 (137)
74 3v31_A Ankyrin repeat family A 99.8 2.2E-20 7.6E-25 151.2 10.9 131 29-189 31-161 (167)
75 3aaa_C Myotrophin, protein V-1 99.8 6.3E-20 2.2E-24 141.8 12.9 113 31-166 4-116 (123)
76 3t8k_A Uncharacterized protein 99.8 3.9E-20 1.3E-24 154.8 10.0 143 33-187 5-178 (186)
77 3ehr_A Osteoclast-stimulating 99.8 2.9E-20 9.8E-25 157.7 9.2 135 29-193 68-203 (222)
78 2y1l_E Darpin-8.4; hydrolase-i 99.8 4.1E-20 1.4E-24 150.5 8.6 136 71-246 15-154 (169)
79 1ycs_B 53BP2, P53BP2; ankyrin 99.8 1.1E-19 3.8E-24 156.4 11.2 133 31-193 34-169 (239)
80 4hbd_A KN motif and ankyrin re 99.8 6.8E-21 2.3E-25 168.0 3.2 171 34-246 76-258 (276)
81 2vge_A RELA-associated inhibit 99.8 2.8E-19 9.5E-24 153.9 13.1 138 69-246 20-164 (229)
82 2aja_A Ankyrin repeat family p 99.8 1.1E-20 3.7E-25 175.1 1.2 171 27-246 85-262 (376)
83 1awc_B Protein (GA binding pro 99.8 1.6E-19 5.4E-24 144.5 7.2 132 74-246 6-141 (153)
84 2rfm_A Putative ankyrin repeat 99.8 1E-19 3.5E-24 150.7 6.2 140 67-246 32-175 (192)
85 3deo_A Signal recognition part 99.8 8.7E-19 3E-23 144.7 10.7 114 29-166 39-153 (183)
86 1n0q_A 3ANK, 3 ankyrin repeats 99.8 1.7E-18 6E-23 127.5 11.0 93 33-129 1-93 (93)
87 1ihb_A P18-INK4C(INK6), cyclin 99.8 3.2E-19 1.1E-23 143.2 7.3 141 71-234 6-162 (162)
88 1sw6_A Regulatory protein SWI6 99.8 1.1E-19 3.6E-24 164.0 4.7 185 38-246 101-324 (327)
89 1dcq_A PYK2-associated protein 99.8 4.6E-18 1.6E-22 150.7 14.1 126 34-188 130-263 (278)
90 3lvq_E ARF-GAP with SH3 domain 99.8 4E-18 1.4E-22 162.4 13.6 129 35-192 133-269 (497)
91 3ui2_A Signal recognition part 99.8 1.8E-18 6.3E-23 149.7 9.6 141 29-186 40-183 (244)
92 2b0o_E UPLC1; arfgap, structur 99.8 5.9E-18 2E-22 151.7 13.0 126 34-188 151-284 (301)
93 1n0q_A 3ANK, 3 ankyrin repeats 99.7 7E-18 2.4E-22 124.2 10.4 91 71-188 3-93 (93)
94 1d9s_A Cyclin-dependent kinase 99.7 9.4E-19 3.2E-23 137.6 5.9 127 67-234 9-136 (136)
95 1bi7_B P16INK4A, MTS1, multipl 99.7 5.8E-19 2E-23 142.0 3.5 137 68-245 10-151 (156)
96 3aaa_C Myotrophin, protein V-1 99.7 1E-17 3.4E-22 129.3 10.4 111 70-207 7-117 (123)
97 3jue_A Arfgap with coiled-coil 99.7 1.6E-17 5.5E-22 153.4 12.5 129 30-187 195-325 (368)
98 3c5r_A BARD-1, BRCA1-associate 99.7 2.8E-17 9.5E-22 128.9 11.8 115 67-208 7-121 (137)
99 2b0o_E UPLC1; arfgap, structur 99.7 2.3E-17 7.9E-22 147.8 12.9 129 76-246 157-294 (301)
100 3t8k_A Uncharacterized protein 99.7 2.5E-18 8.5E-23 143.8 5.5 153 75-262 11-176 (186)
101 1bd8_A P19INK4D CDK4/6 inhibit 99.7 5.6E-18 1.9E-22 135.2 6.9 132 73-246 5-141 (156)
102 2aja_A Ankyrin repeat family p 99.7 1E-19 3.6E-24 168.5 -3.8 131 31-196 125-258 (376)
103 2jab_A H10-2-G3; HER2, darpin, 99.7 8.5E-18 2.9E-22 132.1 7.6 103 71-200 15-117 (136)
104 1n0r_A 4ANK, 4 ankyrin repeats 99.7 2.1E-17 7.1E-22 126.3 8.8 124 71-234 3-126 (126)
105 1dcq_A PYK2-associated protein 99.7 1.7E-16 5.7E-21 140.6 12.7 178 25-246 57-271 (278)
106 2l6b_A NR1C; ankyrin, consensu 99.7 3.5E-17 1.2E-21 124.6 6.4 93 29-125 4-96 (115)
107 3ehr_A Osteoclast-stimulating 99.7 4.6E-17 1.6E-21 137.8 7.4 112 71-208 74-185 (222)
108 2l6b_A NR1C; ankyrin, consensu 99.7 7.1E-17 2.4E-21 122.9 7.5 92 67-160 6-112 (115)
109 2zgd_A 3 repeat synthetic anky 99.7 7.7E-16 2.6E-20 117.0 11.4 94 26-123 16-109 (110)
110 3lvq_E ARF-GAP with SH3 domain 99.7 1.1E-16 3.8E-21 152.5 8.0 131 74-246 136-275 (497)
111 3deo_A Signal recognition part 99.6 3.9E-16 1.3E-20 128.7 7.6 102 70-199 44-146 (183)
112 3ui2_A Signal recognition part 99.6 3.6E-16 1.2E-20 135.2 7.0 106 70-203 45-151 (244)
113 3jue_A Arfgap with coiled-coil 99.6 9.4E-16 3.2E-20 141.5 9.1 141 72-252 201-351 (368)
114 2zgd_A 3 repeat synthetic anky 99.6 2.8E-15 9.5E-20 113.9 9.6 89 67-182 21-109 (110)
115 1gp8_A Protein (scaffolding pr 37.9 24 0.00081 21.2 2.4 19 36-54 15-33 (40)
116 3mkq_B Coatomer subunit alpha; 24.1 1.1E+02 0.0038 24.5 5.0 51 35-92 9-59 (177)
No 1
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.95 E-value=6.4e-28 Score=210.40 Aligned_cols=147 Identities=17% Similarity=0.137 Sum_probs=116.2
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827 33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA 112 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa 112 (263)
+|+||||.|+..|+.++++.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 77 (261)
T 2xai_A 2 SDWSPMHEAAIHGHQLSLRNLISQ--GWAVNII-TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHTPLFNAC 77 (261)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--TCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHH
Confidence 578888888888888888888886 3344443 556677788888888888888888888884 888888888888888
Q ss_pred HcCCHHHHHHHHhCCCCC--------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHH
Q 037827 113 KQGQRNVVCYLLEKTRAP--------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGY 178 (263)
Q Consensus 113 ~~g~~evv~~Ll~~~a~p--------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~ 178 (263)
..|+.++|++|+++++++ ..++.+++..|++.+ ..++.+|.+|.||||+|+++ ++.++
T Consensus 78 ~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-------~~~~~ 149 (261)
T 2xai_A 78 VSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACEN-------QQRAC 149 (261)
T ss_dssp HHTCHHHHHHHHHTTCCSSCSCTTCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHT-------TCHHH
T ss_pred HcCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCCCcCCCCCCCHHHHHHHh-------CCHHH
Confidence 888888888888888762 567778888888774 44677888888888888886 66788
Q ss_pred HHHHcccCCCCCC
Q 037827 179 WKGLLYQWIPVQE 191 (263)
Q Consensus 179 ~~~li~~~~~v~~ 191 (263)
++.|+..|++++.
T Consensus 150 v~~Ll~~g~~~~~ 162 (261)
T 2xai_A 150 VKKLLESGADVNQ 162 (261)
T ss_dssp HHHHHHHTCCTTC
T ss_pred HHHHHHcCCCCCC
Confidence 8888888887774
No 2
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.95 E-value=1.3e-27 Score=211.78 Aligned_cols=195 Identities=16% Similarity=0.126 Sum_probs=162.8
Q ss_pred hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827 27 KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL 106 (263)
Q Consensus 27 ~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T 106 (263)
....+..|+||||.|+..|+.++++.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|
T Consensus 52 ~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~t 127 (285)
T 3d9h_A 52 LMGDAVSDWSPMHEAAIHGHQLSLRNLISQ--GWAVNII-TADHVSPLHEACLGGHLSCVKILLKHGAQV-NGVTADWHT 127 (285)
T ss_dssp TCSSSCCSCCHHHHHHHTTCHHHHHHHHHT--TCCSCEE-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCS-SCCCTTCCC
T ss_pred ccCCCccCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCCHHHHHHHCCcHHHHHHHHHCCCCC-CCCCCCCCC
Confidence 356788999999999999999999999997 3445444 566788889999999999999999999995 999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCC--------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827 107 PIHRAAKQGQRNVVCYLLEKTRAP--------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS 172 (263)
Q Consensus 107 PLh~Aa~~g~~evv~~Ll~~~a~p--------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s 172 (263)
|||+|+..|+.++|++|++.++++ ..++.+++..|++.+ ..++.+|.+|.||||+|+.+
T Consensus 128 ~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g-~~~~~~d~~g~t~L~~A~~~------ 200 (285)
T 3d9h_A 128 PLFNACVSGSWDCVNLLLQHGASVQPESDLASPIHEAARRGHVECVNSLIAYG-GNIDHKISHLGTPLYLACEN------ 200 (285)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTT-CCTTCCBTTTBCHHHHHHHT------
T ss_pred HHHHHHHcCHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCCcCCCCCCHHHHHHHc------
Confidence 999999999999999999999862 457888999999875 45788999999999999997
Q ss_pred CcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceecc
Q 037827 173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATN 247 (263)
Q Consensus 173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 247 (263)
++.++++.|+..|++++. +..+.++.+. +......++..+|+..|+|+ +.|+|||++|..
T Consensus 201 -~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~-------------A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~ 264 (285)
T 3d9h_A 201 -QQRACVKKLLESGADVNQ-GKGQDSPLHA-------------VVRTASEELACLLMDFGADTQAKNAEGKRPVELVPP 264 (285)
T ss_dssp -TCHHHHHHHHHTTCCTTC-CBTTBCHHHH-------------HHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT
T ss_pred -CcHHHHHHHHHCCCCCCC-CCCCCCHHHH-------------HHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC
Confidence 778999999999998874 2222333222 22222367788899999998 889999999983
No 3
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.95 E-value=8.7e-28 Score=209.00 Aligned_cols=196 Identities=12% Similarity=-0.004 Sum_probs=147.0
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhcc-CCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSK-TPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP 107 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~-~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP 107 (263)
..|.+|+||||.|+..|+.++|+.|++.+ ++..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tp 81 (282)
T 1oy3_D 4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQ-NDLGQTALHLAAILGEASTVEKLYAAGAGV-LVAERGGHTA 81 (282)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SCCCTTSCCH
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 46789999999999999999999999862 22224443 556788889999999999999999999995 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCC---------------------------------------------------------C
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRA---------------------------------------------------------P 130 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~---------------------------------------------------------p 130 (263)
||+|+..|+.+++++|++++++ |
T Consensus 82 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~ 161 (282)
T 1oy3_D 82 LHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTP 161 (282)
T ss_dssp HHHHTTTTCHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCH
T ss_pred HHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCH
Confidence 9999999999999999987642 0
Q ss_pred -----CCCCHHHHHHHHHhCCCcccccc-CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCC
Q 037827 131 -----LDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENV 204 (263)
Q Consensus 131 -----~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~ 204 (263)
..++.+++..|++.+.. ++.++ ..|.||||+|+++ ++.++++.|+..|++++..+..+.++.+.++
T Consensus 162 L~~A~~~g~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A~~~-------~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~ 233 (282)
T 1oy3_D 162 LHVAVIHKDAEMVRLLRDAGAD-LNKPEPTCGRTPLHLAVEA-------QAASVLELLLKAGADPTARMYGGRTPLGSAL 233 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCcCHHHHHHHc-------CCHHHHHHHHHcCCCCcccccCCCCHHHHHH
Confidence 45677888888887544 45565 4599999999887 6779999999999888887655544443333
Q ss_pred ChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceecc
Q 037827 205 DGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLATN 247 (263)
Q Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~ 247 (263)
.. ...++..+|+..||++ +.+.|||+.|.+
T Consensus 234 ~~-------------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~ 267 (282)
T 1oy3_D 234 LR-------------PNPILARLLRAHGAPEPEDGGDKLSPCSSSGS 267 (282)
T ss_dssp TS-------------SCHHHHHHHHHTTCCCCCCC------------
T ss_pred Hc-------------CCcHHHHHHHHcCCCcCcCCCcccccccccCC
Confidence 22 2267788899999999 889999999964
No 4
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.95 E-value=3.6e-28 Score=214.67 Aligned_cols=198 Identities=17% Similarity=0.073 Sum_probs=138.2
Q ss_pred hhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccc------cccCCcCHHHHHHHhCCcH-HHHHHHHHcCCCCCC
Q 037827 26 EKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALAC------IIVDQSSIFEFIVASTGKL-ELISTLIRYEADLPN 98 (263)
Q Consensus 26 ~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~------~i~~~g~iv~~~AA~~G~~-eiv~~Ll~~ga~l~~ 98 (263)
+...+|..+.+||+.||..|++++|+.||+. ....... ..+..+....++|+..++. .++++|++.|+++ +
T Consensus 3 ee~kkd~~~~~~L~~A~~~G~~~~v~~LL~~-~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadv-n 80 (269)
T 4b93_B 3 EETKKDYREVEKLLRAVADGDLEMVRYLLEW-TEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGV-N 80 (269)
T ss_dssp ----CCCHHHHHHHHHHHTTCHHHHHHHHTC-C----------------------------------------CCCCT-T
T ss_pred cccccCccchhHHHHHHHcCCHHHHHHHHHC-CCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCC-C
Confidence 3446778889999999999999999999987 2221111 0122223444578877766 4889999999995 9
Q ss_pred CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHH
Q 037827 99 VRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELL 163 (263)
Q Consensus 99 ~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlA 163 (263)
.+|.+|+||||+||..|+.++|++|+..++++ ..+..+++..|+..+ ..++.+|.+|.||||+|
T Consensus 81 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g-~~~n~~d~~g~TpL~~A 159 (269)
T 4b93_B 81 VTSQDGSSPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSN-AKPNKKDLSGNTPLIYA 159 (269)
T ss_dssp CCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT-CCSCCCCTTCCCHHHHH
T ss_pred CcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCccCCCCCCccccccccChHHHHHHHHHCC-CCCCCCCCCCCCHHHHH
Confidence 99999999999999999999999999999872 456788888888874 55788999999999999
Q ss_pred hcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccC
Q 037827 164 SKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVST 239 (263)
Q Consensus 164 A~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~ 239 (263)
++. ++.++++.|+..|++++..+..+.++.+.++.. ...++..+|+..|||+ +.|+
T Consensus 160 ~~~-------g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~~~-------------g~~~~v~~Ll~~Gad~~~~d~~G~ 219 (269)
T 4b93_B 160 CSG-------GHHELVALLLQHGASINASNNKGNTALHEAVIE-------------KHVFVVELLLLHGASVQVLNKRQR 219 (269)
T ss_dssp HHT-------TCGGGHHHHHHTTCCTTCBCTTSCBHHHHHHHT-------------TCHHHHHHHHHTTCCSCCCCTTSC
T ss_pred HHC-------CCHHHHHHHHHCCCCCCccccCCCcHHHHHHHc-------------CCHHHHHHHHHCCCCCCCcCCCCC
Confidence 997 678999999999999998876555554433322 2266778899999999 8899
Q ss_pred Cccceec
Q 037827 240 TPLTLAT 246 (263)
Q Consensus 240 ~~~~~~~ 246 (263)
|||++|.
T Consensus 220 TpL~~A~ 226 (269)
T 4b93_B 220 TAVDCAE 226 (269)
T ss_dssp CSGGGSC
T ss_pred CHHHHHH
Confidence 9999996
No 5
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.95 E-value=4.3e-27 Score=199.09 Aligned_cols=201 Identities=14% Similarity=0.056 Sum_probs=161.8
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC--CCCCCC-CCCCCCcHHHH
Q 037827 34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE--ADLPNV-RDEENLLPIHR 110 (263)
Q Consensus 34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g--a~l~~~-~d~~G~TPLh~ 110 (263)
|.||||.|+..|+.+.++.|++. .+...... +..|....++|+..|+.+++++|+++| +++ +. .|..|+||||+
T Consensus 2 g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~g~t~L~~ 78 (228)
T 2dzn_A 2 SNYPLHQACMENEFFKVQELLHS-KPSLLLQK-DQDGRIPLHWSVSFQAHEITSFLLSKMENVNL-DDYPDDSGWTPFHI 78 (228)
T ss_dssp -CCHHHHHHHTTCHHHHHHHHHH-CGGGTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCG-GGCCCTTSCCHHHH
T ss_pred CccHHHHHHHhCCHHHHHHHHhc-CccccccC-CCCCCCHHHHHHHcCCHHHHHHHHhccccccc-cccCCCCCCCHHHH
Confidence 67899999999999999999998 44444333 566788889999999999999999999 564 44 88999999999
Q ss_pred HHHcCCHHHHHHHHhCC--CCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827 111 AAKQGQRNVVCYLLEKT--RAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG 173 (263)
Q Consensus 111 Aa~~g~~evv~~Ll~~~--a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~ 173 (263)
|+..|+.+++++|++++ ++. ..+..+++..|++. +..++.+|.+|.||||+|++.
T Consensus 79 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~------- 150 (228)
T 2dzn_A 79 ACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIEN-GASVRIKDKFNQIPLHRAASV------- 150 (228)
T ss_dssp HHHHCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHT-------
T ss_pred HHHcCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHc-CCCccccCCCCCCHHHHHHHc-------
Confidence 99999999999999998 431 56788999999987 455788999999999999997
Q ss_pred cchHHHHHHcccC-CCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHH-hhhccc----cccCCccceecc
Q 037827 174 IRLGYWKGLLYQW-IPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLL-HWFVSF----RVSTTPLTLATN 247 (263)
Q Consensus 174 ~~~~~~~~li~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~----~~~~~~~~~~~~ 247 (263)
++.++++.|+..| ++++..+..+.++.+.++... ..++..+|+ ..|+|+ +.|+|||++|..
T Consensus 151 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~~-------------~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~ 217 (228)
T 2dzn_A 151 GSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG-------------HGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN 217 (228)
T ss_dssp TCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTT-------------CHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSS
T ss_pred CCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHcC-------------CHHHHHHHHHhcCCCCCccCCCCCcHHHHHHH
Confidence 6789999999999 888877655544443333222 256777888 789998 789999999964
Q ss_pred ccccCchhhhhhhhcC
Q 037827 248 DVRLPHSKIQYLHQYL 263 (263)
Q Consensus 248 ~~~~~~~~~~~~~~~~ 263 (263)
. ...+||.+++
T Consensus 218 ~-----~~~~~l~~~i 228 (228)
T 2dzn_A 218 E-----QVKKFFLNNV 228 (228)
T ss_dssp T-----THHHHHHTTC
T ss_pred H-----HHHHHHHhcC
Confidence 2 4566776653
No 6
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.94 E-value=5.5e-27 Score=199.73 Aligned_cols=194 Identities=13% Similarity=0.009 Sum_probs=158.7
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHh---ccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIM---SKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL 105 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~---~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~ 105 (263)
..|.+|+||||.|+..|+.++++.|++ . .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+
T Consensus 4 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 80 (241)
T 1k1a_A 4 RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQ-GGRELDIY-NNLRQTPLHLAVITTLPSVVRLLVTAGASP-MALDRHGQ 80 (241)
T ss_dssp ---CTTCCHHHHHHHTTCHHHHHHHHHHHHH-TTCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHHHHh-cCCCCCcc-cccCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccCCCCC
Confidence 568899999999999999999999997 2 23444444 556788889999999999999999999995 99999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCC----CC---------------CCCCHHHHHHHHHhCCCcccccc-CCCchHHHHHhc
Q 037827 106 LPIHRAAKQGQRNVVCYLLEKTR----AP---------------LDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELLSK 165 (263)
Q Consensus 106 TPLh~Aa~~g~~evv~~Ll~~~a----~p---------------~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlAA~ 165 (263)
||||+|+..|+.+++++|++.++ +. ..+..+++..|++.+.. ++..| ..|.||||+|++
T Consensus 81 t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~g~t~L~~A~~ 159 (241)
T 1k1a_A 81 TAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGAD-IDAVDIKSGRSPLIHAVE 159 (241)
T ss_dssp CHHHHHHHTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-TTCCCTTTCCCHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCC-cccccccCCCcHHHHHHH
Confidence 99999999999999999999886 21 45778899999988554 56666 899999999999
Q ss_pred CCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCc
Q 037827 166 RPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTP 241 (263)
Q Consensus 166 ~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 241 (263)
+ ++.++++.|+..|++++..+..+.++.+.++. ....++..+|+..|+|+ +.++||
T Consensus 160 ~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~ga~~~~~~~~g~tp 219 (241)
T 1k1a_A 160 N-------NSLSMVQLLLQHGANVNAQMYSGSSALHSASG-------------RGLLPLVRTLVRSGADSSLKNCHNDTP 219 (241)
T ss_dssp T-------TCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH-------------HTCHHHHHHHHHTTCCTTCCCTTSCCT
T ss_pred c-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-------------cCCHHHHHHHHhcCCCCCCcCCCCCCH
Confidence 7 67899999999999998876555444433322 22267788899999998 789999
Q ss_pred cceec
Q 037827 242 LTLAT 246 (263)
Q Consensus 242 ~~~~~ 246 (263)
|++|.
T Consensus 220 l~~A~ 224 (241)
T 1k1a_A 220 LMVAR 224 (241)
T ss_dssp TTTCS
T ss_pred HHHHH
Confidence 99996
No 7
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.94 E-value=6.6e-27 Score=199.36 Aligned_cols=193 Identities=16% Similarity=0.055 Sum_probs=162.2
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
.++.+|+||||.|+..|+.+++++|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 6 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 81 (237)
T 3b7b_A 6 MEHQNKRSPLHAAAEAGHVDICHMLVQA--GANIDTC-SEDQRTPLMEAAENNHLEAVKYLIKAGALV-DPKDAEGSTCL 81 (237)
T ss_dssp CSSCCSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCC-CCCCTTSCCHH
T ss_pred cccCCCCCHHHHHHHcCcHHHHHHHHHc--CCCcCcc-CCCCCCHHHHHHHhCCHHHHHHHHhCCCCC-CCCCCCCCcHH
Confidence 5678899999999999999999999997 3444443 556678889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCC-CC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827 109 HRAAKQGQRNVVCYLLEKTR-AP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS 172 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a-~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s 172 (263)
|+|+..|+.+++++|++.+. ++ ..+..+++..|++.+ ..++.+|.+|.||||+|++.
T Consensus 82 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~------ 154 (237)
T 3b7b_A 82 HLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKG-SDINIRDNEENICLHWAAFS------ 154 (237)
T ss_dssp HHHHHTTCHHHHHHHHTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH------
T ss_pred HHHHHcCCHHHHHHHHhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHC------
Confidence 99999999999999999984 31 568889999999875 44688899999999999987
Q ss_pred CcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827 173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
++.++++.|+..|++++..+..+.++.+.++.. ...++..+|+..|+|+ +.|.|||++|.
T Consensus 155 -~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~-------------~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 218 (237)
T 3b7b_A 155 -GCVDIAEILLAAKCDLHAVNIHGDSPLHIAARE-------------NRYDCVVLFLSRDSDVTLKNKEGETPLQCAS 218 (237)
T ss_dssp -CCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT-------------TCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred -CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHh-------------CCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 678999999999999888765444444333222 2267788899999999 79999999996
No 8
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.94 E-value=9.9e-28 Score=208.04 Aligned_cols=195 Identities=14% Similarity=0.082 Sum_probs=133.9
Q ss_pred hhhcccChHHHHHHHHcC-------------CHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC
Q 037827 28 IIKDIANYKQVTRYLLED-------------DWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEA 94 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G-------------~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga 94 (263)
..+|.+|+||||.|+..| +.++++.|++. . ..+....+..|....++||..|+.+++++|+++|+
T Consensus 4 n~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~-g-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~ 81 (253)
T 1yyh_A 4 NVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQ-G-ASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA 81 (253)
T ss_dssp --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHc-c-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence 457889999999999987 89999999987 3 33333335677888899999999999999999999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC-CC---------------CCCCHHHHHHHHHhCCCccccccCCCch
Q 037827 95 DLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTR-AP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGK 158 (263)
Q Consensus 95 ~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a-~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~T 158 (263)
++ +.+|..|+||||+|+..|+.+++++|++.++ +. ..+..+++..|+..+ ..++.+|.+|.|
T Consensus 82 ~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~d~~g~t 159 (253)
T 1yyh_A 82 DA-NIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSH-ADVNAVDDLGKS 159 (253)
T ss_dssp CT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTT-CCTTCBCTTSCB
T ss_pred CC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcC-CCCCCcCCCCCC
Confidence 95 9999999999999999999999999999987 31 446677888888864 557889999999
Q ss_pred HHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc---
Q 037827 159 ILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF--- 235 (263)
Q Consensus 159 PLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 235 (263)
|||+|++. ++.++++.|+..|++++..+..+.++.+.++.. ...++..+|+..|+++
T Consensus 160 ~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~-------------~~~~~v~~Ll~~ga~~~~~ 219 (253)
T 1yyh_A 160 ALHWAAAV-------NNVDAAVVLLKNGANKDMQNNREETPLFLAARE-------------GSYETAKVLLDHFANRDIT 219 (253)
T ss_dssp HHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHH-------------TCHHHHHHHHHTTCCTTCC
T ss_pred HHHHHHHc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHC-------------CCHHHHHHHHHcCCCcccc
Confidence 99999997 678999999999999988765554444333322 2367788899999998
Q ss_pred -cccCCccceec
Q 037827 236 -RVSTTPLTLAT 246 (263)
Q Consensus 236 -~~~~~~~~~~~ 246 (263)
+.++|||++|.
T Consensus 220 d~~g~tpl~~A~ 231 (253)
T 1yyh_A 220 DHMDRLPRDIAQ 231 (253)
T ss_dssp CTTCCCHHHHHH
T ss_pred ccCCCCHHHHHH
Confidence 78999999995
No 9
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.94 E-value=3.9e-27 Score=207.46 Aligned_cols=195 Identities=12% Similarity=0.081 Sum_probs=155.3
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..+.+|||.|+..|+.++|+.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 35 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~tpL 110 (299)
T 1s70_B 35 KVKFDDGAVFLAACSSGDTEEVLRLLER--GADINYA-NVDGLTALHQACIDDNVDMVKFLVENGANI-NQPDNEGWIPL 110 (299)
T ss_dssp CCEECHHHHHHHHHHHTCHHHHHHHHHH--CCCTTCB-CTTCCBHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred ccccCCccHHHHHHHcCCHHHHHHHHHc--CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcHH
Confidence 4456789999999999999999999997 3445444 556788889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCC--------------------------
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPK-------------------------- 147 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~-------------------------- 147 (263)
|+|+..|+.++|++|+++|+++ ..++.+++..++...+.
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 9999999999999999999863 23344455444443222
Q ss_pred ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHH
Q 037827 148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYL 227 (263)
Q Consensus 148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (263)
.....+..|.||||+|+.+ ++.++++.|+..|++++..+..+.++.+.++.- ...++..+
T Consensus 191 ~~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~g~d~~~~d~~g~tpL~~A~~~-------------~~~~~v~~ 250 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAK-------GYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHW-------------GKEEACRI 250 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHH-------TCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHT-------------TCHHHHHH
T ss_pred chhhhcCCCCCHHHHHHHC-------CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHhc-------------CCHHHHHH
Confidence 2233578899999999997 678999999999999988765554444333222 22667788
Q ss_pred HHhhhccc----cccCCccceecc
Q 037827 228 LLHWFVSF----RVSTTPLTLATN 247 (263)
Q Consensus 228 ~~~~~~~~----~~~~~~~~~~~~ 247 (263)
|+..|+|+ +.|+|||++|..
T Consensus 251 Ll~~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 251 LVENLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp HHHTTCCTTCCCTTSCCTTTSCCS
T ss_pred HHHcCCCCCCcCCCCCCHHHHHHH
Confidence 99999998 789999999963
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.94 E-value=8.6e-27 Score=197.89 Aligned_cols=191 Identities=18% Similarity=0.137 Sum_probs=160.2
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827 32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA 111 (263)
Q Consensus 32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A 111 (263)
..+.+|||.|+..|+++.++.++.. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus 4 ~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 80 (231)
T 3aji_A 4 CVSNIMICNLAYSGKLDELKERILA-DKSLATRT-DQDSRTALHWACSAGHTEIVEFLLQLGVPV-NDKDDAGWSPLHIA 80 (231)
T ss_dssp CCSSSHHHHHHHHTCHHHHHHHHHH-CGGGGGCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHH
T ss_pred ccccchHHHHHHhCCHHHHHHHHHh-chhhhhcC-CCCCCCHHHHHHHcCcHHHHHHHHHhCCCC-CCcCCCCCCHHHHH
Confidence 3467899999999999999999998 56555443 566788888999999999999999999995 99999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcch
Q 037827 112 AKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRL 176 (263)
Q Consensus 112 a~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~ 176 (263)
+..|+.+++++|+++++++ ..+..+++..|++.+ ..++.+|..|.||||+|++. ++.
T Consensus 81 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-------~~~ 152 (231)
T 3aji_A 81 ASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG-ANPDAKDHYDATAMHRAAAK-------GNL 152 (231)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH-------TCH
T ss_pred HHcCHHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCcHHHHHHHc-------CCH
Confidence 9999999999999999862 567889999998874 44688899999999999987 678
Q ss_pred HHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827 177 GYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 177 ~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
++++.|+..|++++..+..+.++.+.++. ....++..+|+..|+|+ +.++|||++|.
T Consensus 153 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 213 (231)
T 3aji_A 153 KMVHILLFYKASTNIQDTEGNTPLHLACD-------------EERVEEAKFLVTQGASIYIENKEEKTPLQVAK 213 (231)
T ss_dssp HHHHHHHHTTCCSCCCCTTSCCHHHHHHH-------------TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHSC
T ss_pred HHHHHHHhcCCCccccCCCCCCHHHHHHH-------------CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHH
Confidence 99999999999988876555444433322 22367788899999998 78999999996
No 11
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.94 E-value=1.1e-26 Score=207.37 Aligned_cols=193 Identities=16% Similarity=0.041 Sum_probs=153.6
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..|..|+||||.|+..|+.++|+.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 53 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~~-~~~~~~g~t~L 128 (351)
T 3utm_A 53 ASDGRKSTPLHLAAGYNRVRIVQLLLQH--GADVHAK-DKGGLVPLHNACSYGHYEVTELLLKHGACV-NAMDLWQFTPL 128 (351)
T ss_dssp CSSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcc-CCCCCcHHHHHHHCCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence 4567789999999999999999999987 3444444 556678888999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCC---------------------------------------------------------
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPL--------------------------------------------------------- 131 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~--------------------------------------------------------- 131 (263)
|+|+..|+.++|++|+++|+++.
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 208 (351)
T 3utm_A 129 HEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQP 208 (351)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCT
T ss_pred HHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCC
Confidence 99999999999999999887630
Q ss_pred ------------C---CCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC
Q 037827 132 ------------D---GSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH 196 (263)
Q Consensus 132 ------------~---~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~ 196 (263)
. +..+++..|+.. +..++.+|.+|.||||+|+++ ++.++++.|+..|++++..+..+
T Consensus 209 ~~~~t~L~~A~~~~~~~~~~~~~~Ll~~-g~~~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~ga~~n~~d~~g 280 (351)
T 3utm_A 209 QSHETALHCAVASLHPKRKQVAELLLRK-GANVNEKNKDFMTPLHVAAER-------AHNDVMEVLHKHGAKMNALDSLG 280 (351)
T ss_dssp TTCCCHHHHHHHCCSTTHHHHHHHHHHT-TCCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTS
T ss_pred CCCCCHHHHHHHHhCccHHHHHHHHHHc-CCCcCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCCCCcCCCC
Confidence 0 335666667666 445678899999999999987 67799999999999988876555
Q ss_pred CCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827 197 AHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
.++.+.++. ....++..+|+..|+|. +.+.|||++|.
T Consensus 281 ~t~L~~A~~-------------~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a~ 321 (351)
T 3utm_A 281 QTALHRAAL-------------AGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN 321 (351)
T ss_dssp CCHHHHHHH-------------HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHSC
T ss_pred CCHHHHHHH-------------cCcHHHHHHHHHcCCCCCCcCCCCCChhhhhh
Confidence 444433322 22367778899999998 88999999995
No 12
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=99.93 E-value=7e-25 Score=191.11 Aligned_cols=202 Identities=14% Similarity=0.072 Sum_probs=166.8
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+.+|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +. +.+|+|||
T Consensus 31 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~-~~~g~t~L 105 (261)
T 2xai_A 31 IITADHVSPLHEACLGGHLSCVKILLKH--GAQVNGV-TADWHTPLFNACVSGSWDCVNLLLQHGASV-QP-ESDLASPI 105 (261)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-SC-SCTTCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CC-CCCCCCHH
Confidence 5677899999999999999999999997 3444444 566788889999999999999999999995 65 55699999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG 173 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~ 173 (263)
|+|+..|+.++|++|++.|+++ ..++.+++..|++.+.+ ++ .|.+|.||||+|++.
T Consensus 106 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~-~~~~g~t~Lh~A~~~------- 176 (261)
T 2xai_A 106 HEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVART------- 176 (261)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCC-TT-CCBTTBCHHHHHHHH-------
T ss_pred HHHHHcCcHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCC-CC-CCCCCCChHHHHHHc-------
Confidence 9999999999999999999872 57889999999998655 44 489999999999987
Q ss_pred cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhcc----------c--cccCCc
Q 037827 174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVS----------F--RVSTTP 241 (263)
Q Consensus 174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~--~~~~~~ 241 (263)
++.++++.|+..|++++..+..+.++.+.++ ...++..+|+..+.. + ..|+||
T Consensus 177 ~~~~~v~~Ll~~gad~~~~d~~g~tpl~~A~---------------~~~~~~~~ll~~~~~~~l~~~~~~~~r~~~g~t~ 241 (261)
T 2xai_A 177 ASEELACLLMDFGADTQAKNAEGKRPVELVP---------------PESPLAQLFLEREGPPSLMQLCRLRIRKCFGIQQ 241 (261)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC---------------TTCTHHHHHHHC-CCCCHHHHHHHHHHTTSCTTC
T ss_pred CCHHHHHHHHHcCCCCCCcCCCCCChhhhcc---------------ccccHHHHHHhccCCccHHHHHHHHHHHHhchhc
Confidence 6789999999999999988877766665554 224567777776442 2 689999
Q ss_pred cceeccccccCchhhhhhh
Q 037827 242 LTLATNDVRLPHSKIQYLH 260 (263)
Q Consensus 242 ~~~~~~~~~~~~~~~~~~~ 260 (263)
|++|. .+.+|..-.+||.
T Consensus 242 l~~~~-~~~~p~~l~~~l~ 259 (261)
T 2xai_A 242 HHKIT-KLVLPEDLKQFLL 259 (261)
T ss_dssp GGGGG-GSSSCHHHHHHHT
T ss_pred cccCc-ccCCcHHHHHHHh
Confidence 99987 5668988888873
No 13
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.93 E-value=3.7e-26 Score=195.38 Aligned_cols=194 Identities=13% Similarity=0.006 Sum_probs=157.9
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCC---cccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPN---ALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL 105 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~---~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~ 105 (263)
..|.+|+||||.|+..|+.++++.|++. ... .++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~ 79 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQ-VKGDLAFLNFQ-NNLQQTPLHLAVITNQPEIAEALLGAGCDP-ELRDFRGN 79 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCC-CTTCCCHHHHHHHTTCHHHHHCCCSCCCCS-CCCCTTCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHH-hhccHHHhhcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCC
Confidence 4678899999999999999999999986 222 34443 556678888999999999999999999994 99999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCC---------------------CCCCHHHHHHHHHhCCCccccccC-CCchHHHHH
Q 037827 106 LPIHRAAKQGQRNVVCYLLEKTRAP---------------------LDGSDDVAYGLLRKHPKLAWAEIA-GTGKILELL 163 (263)
Q Consensus 106 TPLh~Aa~~g~~evv~~Ll~~~a~p---------------------~~~~~~va~~Ll~~~~~~~~~~D~-~G~TPLHlA 163 (263)
||||+|+..|+.+++++|+..++++ ..++.+++..|++.+.. ++.+|. +|.||||+|
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~~g~tpL~~A 158 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGAD-VNAQEPCNGRTALHLA 158 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCC-TTCCCTTTCCCHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CCCCCCCCCCCHHHHH
Confidence 9999999999999999999988631 56788999999988544 677786 999999999
Q ss_pred hcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc------cc
Q 037827 164 SKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF------RV 237 (263)
Q Consensus 164 A~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~ 237 (263)
++. ++.++++.|+..|++++..+..+.++.+.++.... .++..+|+..|++. ++
T Consensus 159 ~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~-------------~~~~~~Ll~~ga~~~~~~~~~~ 218 (236)
T 1ikn_D 159 VDL-------QNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPS-------------TRIQQQLGQLTLENLQMLPESE 218 (236)
T ss_dssp HHT-------TCHHHHHHHHTTTCCSCCCCTTCCCGGGGCTTSSC-------------HHHHHHHHTTSCGGGSSCCCCC
T ss_pred HHc-------CCHHHHHHHHHcCCCCCcccCCCCCHHHHHHccCc-------------hHHHHHHHHcchhhhhcCCccc
Confidence 997 67899999999999999887766666665554443 67788999999976 88
Q ss_pred cCCccceec
Q 037827 238 STTPLTLAT 246 (263)
Q Consensus 238 ~~~~~~~~~ 246 (263)
+.||.+.+.
T Consensus 219 ~~~~~~~~~ 227 (236)
T 1ikn_D 219 DEESYDTES 227 (236)
T ss_dssp TTTCCCCC-
T ss_pred hHHHHhhhc
Confidence 999999885
No 14
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.93 E-value=2.6e-25 Score=192.68 Aligned_cols=196 Identities=15% Similarity=0.013 Sum_probs=146.4
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR 110 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~ 110 (263)
+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus 36 ~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 111 (285)
T 1wdy_A 36 EEGGWTPLHNAVQMSREDIVELLLRH--GADPVLR-KKNGATPFLLAAIAGSVKLLKLFLSKGADV-NECDFYGFTAFME 111 (285)
T ss_dssp TTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTCCBHHHH
T ss_pred CCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCcccCCHHHH
Confidence 55678888888888888888888886 3333333 455677778888888888888888888884 8888888888888
Q ss_pred HHHcCCHHHHHHHHhCCCCC-------------------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827 111 AAKQGQRNVVCYLLEKTRAP-------------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK 165 (263)
Q Consensus 111 Aa~~g~~evv~~Ll~~~a~p-------------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~ 165 (263)
|+..|+.+++++|++.++++ ..++.+++..|+...+..++.+|..|.||||+|+.
T Consensus 112 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~ 191 (285)
T 1wdy_A 112 AAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALL 191 (285)
T ss_dssp HHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHH
Confidence 88888888888888887652 34677888888887666678888889999998888
Q ss_pred CCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh-hhccc----cccCC
Q 037827 166 RPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH-WFVSF----RVSTT 240 (263)
Q Consensus 166 ~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~ 240 (263)
.+.. .....+++.|+..|++++..+..+.++.+.++. ....++...|+. .|+++ +.+.|
T Consensus 192 ~~~~---~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~~g~~~~~~~~~g~t 255 (285)
T 1wdy_A 192 SSDD---SDVEAITHLLLDHGADVNVRGERGKTPLILAVE-------------KKHLGLVQRLLEQEHIEINDTDSDGKT 255 (285)
T ss_dssp CSCT---TTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHH-------------TTCHHHHHHHHHSSSCCTTCCCTTSCC
T ss_pred cccc---chHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHH-------------cCCHHHHHHHHhccCCCccccCCCCCc
Confidence 7421 122688888888888887765444333332221 222566677777 78888 78999
Q ss_pred ccceec
Q 037827 241 PLTLAT 246 (263)
Q Consensus 241 ~~~~~~ 246 (263)
||++|.
T Consensus 256 ~l~~A~ 261 (285)
T 1wdy_A 256 ALLLAV 261 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999996
No 15
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.93 E-value=1.3e-24 Score=179.76 Aligned_cols=145 Identities=21% Similarity=0.173 Sum_probs=122.3
Q ss_pred HHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcC
Q 037827 36 KQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQG 115 (263)
Q Consensus 36 t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g 115 (263)
++|+.||+.|+.++|+.||+. +..++.. +..|.+..++|+..|+.+++++|+++|+++ +.+|.+|+||||+|+..|
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~--Gadvn~~-d~~g~t~l~~a~~~~~~~~~~~ll~~gad~-~~~d~~g~TpLh~A~~~g 81 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIEN--GADVNAS-DSDGRTPLHHAAENGHKEVVKLLISKGADV-NAKDSDGRTPLHHAAENG 81 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTT
T ss_pred HHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcccch-hhhccCCCCHHHHHHHcC
Confidence 469999999999999999987 4555555 666788888999999999999999999995 999999999999999999
Q ss_pred CHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHH
Q 037827 116 QRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWK 180 (263)
Q Consensus 116 ~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~ 180 (263)
+.++|++|+++|+++ ..++.+++..|++.+ ..++.+|.+|.||||+|+++ ++.++++
T Consensus 82 ~~~~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~g-ad~~~~d~~G~TpL~~A~~~-------g~~~iv~ 153 (169)
T 4gpm_A 82 HKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKG-ADVNTSDSDGRTPLDLAREH-------GNEEVVK 153 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHHHH
T ss_pred CHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHc-------CCHHHHH
Confidence 999999999999862 678889999999875 45788999999999999997 6789999
Q ss_pred HHcccCCCCCCC
Q 037827 181 GLLYQWIPVQEE 192 (263)
Q Consensus 181 ~li~~~~~v~~~ 192 (263)
.|+..|++||.-
T Consensus 154 ~Ll~~GA~ie~~ 165 (169)
T 4gpm_A 154 LLEKQGGWLEHH 165 (169)
T ss_dssp HHHTC-------
T ss_pred HHHHCCCCcCCC
Confidence 999999998754
No 16
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.92 E-value=2e-25 Score=200.79 Aligned_cols=158 Identities=13% Similarity=-0.012 Sum_probs=104.6
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC--------------
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL-------------- 96 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l-------------- 96 (263)
+.++.|+||.|++.|++++|+.||+. +..++...+..|.+..++||..|+.++|++|+++|+++
T Consensus 22 ~~~~~t~L~~Av~~g~~~~V~~LL~~--Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~ 99 (337)
T 4g8k_A 22 AVEDNHLLIKAVQNEDVDLVQQLLEG--GANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILA 99 (337)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHH--TCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CCCCChHHHHHHHcCCHHHHHHHHHC--CCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHH
Confidence 34567888888888888888888876 34454443444677778888888888888888887752
Q ss_pred ------------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-------------------------CCC
Q 037827 97 ------------------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP-------------------------LDG 133 (263)
Q Consensus 97 ------------------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p-------------------------~~~ 133 (263)
++.+|..|+||||+|+..|+.+++++|+.+|+++ ..|
T Consensus 100 ~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g 179 (337)
T 4g8k_A 100 AIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKG 179 (337)
T ss_dssp HHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHT
T ss_pred HhcccchhhHHhhhccchhhhhccCCCCHHHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCC
Confidence 2445566777777777777777777777776641 235
Q ss_pred CHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCC
Q 037827 134 SDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEY 193 (263)
Q Consensus 134 ~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~ 193 (263)
+.+++..|+.+.+..++.+|..|.||||.++..... +....+++.|+..|++++..+
T Consensus 180 ~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~~~---~~~~~i~~lLl~~gad~n~~d 236 (337)
T 4g8k_A 180 HVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD---SDVEAITHLLLDHGADVNVRG 236 (337)
T ss_dssp CHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHSCT---TTHHHHHHHHHHTTCCTTCCC
T ss_pred CHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHcCc---ccHHHHHHHHHHCCCCCCCcC
Confidence 566666666655555666677777777665543211 123346666666676666654
No 17
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.92 E-value=6.8e-25 Score=195.82 Aligned_cols=200 Identities=14% Similarity=0.098 Sum_probs=162.5
Q ss_pred hhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827 26 EKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL 105 (263)
Q Consensus 26 ~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~ 105 (263)
.....+..+.++||.|+..|+.+.++.++.. .+..++.. +..|....++||..|+.++|++|+++|+++ +.+|..|+
T Consensus 16 ~~~~~~~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~ 92 (351)
T 3utm_A 16 KAVLTGEYKKDELLEAARSGNEEKLMALLTP-LNVNCHAS-DGRKSTPLHLAAGYNRVRIVQLLLQHGADV-HAKDKGGL 92 (351)
T ss_dssp HHHHHHHHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCS-STTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCC
T ss_pred eeeeeccccchhHHHHHHcCCHHHHHHHHHh-cCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCC
Confidence 3456677889999999999999999999987 55565554 556788889999999999999999999995 99999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCcccc-------------------
Q 037827 106 LPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWA------------------- 151 (263)
Q Consensus 106 TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~------------------- 151 (263)
||||+|+..|+.++|++|+++++++ ..++.+++..|++.+.. ++.
T Consensus 93 t~L~~A~~~g~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-~~~~~~~g~~~l~~a~~~~~~~ 171 (351)
T 3utm_A 93 VPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGAD-PTLVNCHGKSAVDMAPTPELRE 171 (351)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-TTCCCTTSCCHHHHCSSHHHHH
T ss_pred cHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-CccccCCCCcchHHHhhhhhHH
Confidence 9999999999999999999999862 57889999999987543 232
Q ss_pred -----------------------------------ccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCC
Q 037827 152 -----------------------------------EIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPH 196 (263)
Q Consensus 152 -----------------------------------~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~ 196 (263)
.+..|.||||+|+...+ .+...+++.|+..|++++..+..+
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~----~~~~~~~~~Ll~~g~~~~~~~~~g 247 (351)
T 3utm_A 172 RLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLH----PKRKQVAELLLRKGANVNEKNKDF 247 (351)
T ss_dssp HHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCS----TTHHHHHHHHHHTTCCTTCCCTTC
T ss_pred HHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhC----ccHHHHHHHHHHcCCCcCCcCCCC
Confidence 24667888888887743 267899999999999998876555
Q ss_pred CCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827 197 AHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 197 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
.++.+.++. ....++..+|+..|+++ +.+.|||++|.
T Consensus 248 ~t~L~~A~~-------------~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~ 288 (351)
T 3utm_A 248 MTPLHVAAE-------------RAHNDVMEVLHKHGAKMNALDSLGQTALHRAA 288 (351)
T ss_dssp CCHHHHHHH-------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred CCHHHHHHH-------------cCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHH
Confidence 444433322 22267788889999999 78899999995
No 18
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.92 E-value=4.2e-25 Score=200.62 Aligned_cols=192 Identities=11% Similarity=-0.028 Sum_probs=157.7
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP 107 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP 107 (263)
...|.+|+||||.||..|+.++|+.|++. +..++.. +..|....++||..|+.++|++|+++|+++ + +.+|+||
T Consensus 14 ~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~--~~~g~t~ 87 (364)
T 3ljn_A 14 IKSDDENMEKIHVAARKGQTDEVRRLIET--GVSPTIQ-NRFGCTALHLACKFGCVDTAKYLASVGEVH-S--LWHGQKP 87 (364)
T ss_dssp --CCHHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHCCHHHHHHHHHHCCCC-C--CBTTBCH
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCcccc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCc-c--ccCCCCH
Confidence 45688899999999999999999999987 3444444 556788889999999999999999999974 3 3579999
Q ss_pred HHHHHHcCCHHHHHHHHhC----CCC---------------------------C-----CCC--CHHHHHHHHHhCCCcc
Q 037827 108 IHRAAKQGQRNVVCYLLEK----TRA---------------------------P-----LDG--SDDVAYGLLRKHPKLA 149 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~----~a~---------------------------p-----~~~--~~~va~~Ll~~~~~~~ 149 (263)
||+|+..|+.++|++|+.. +++ | ..+ +.+++..|+..+ ..+
T Consensus 88 L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~g-a~~ 166 (364)
T 3ljn_A 88 IHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLG-ASP 166 (364)
T ss_dssp HHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHT-CCT
T ss_pred HHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcC-CCC
Confidence 9999999999999999997 332 1 466 899999999984 557
Q ss_pred ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC-----CCCCCCCCCCCCCCCCChhhhhhhccccccccchhh
Q 037827 150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP-----VQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFEL 224 (263)
Q Consensus 150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~-----v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (263)
+.+|.+|.||||+|++. ++.++++.|+..|++ ++..+..+.++.+.++.... .++
T Consensus 167 ~~~d~~g~t~L~~A~~~-------g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~-------------~~~ 226 (364)
T 3ljn_A 167 TAKDKADETPLMRAMEF-------RNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW-------------EDV 226 (364)
T ss_dssp TCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC-------------HHH
T ss_pred cccCCCCCCHHHHHHHc-------CCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC-------------HHH
Confidence 88999999999999997 778999999999988 77776655555554443322 667
Q ss_pred hHHHHhhhccc----cccCCccceec
Q 037827 225 AYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 225 ~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
..+|+..|+|+ +.+.|||++|.
T Consensus 227 v~~Ll~~gad~~~~d~~g~tpL~~A~ 252 (364)
T 3ljn_A 227 AMRFVEMGIDVNMEDNEHTVPLYLSV 252 (364)
T ss_dssp HHHHHTTTCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHHcCCCCCCCCCCCCCHHHHHH
Confidence 78888999998 78999999995
No 19
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=99.92 E-value=1.8e-24 Score=183.52 Aligned_cols=182 Identities=18% Similarity=0.056 Sum_probs=152.9
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 35 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 110 (231)
T 3aji_A 35 RTDQDSRTALHWACSAGHTEIVEFLLQL--GVPVNDK-DDAGWSPLHIAASAGXDEIVKALLVKGAHV-NAVNQNGCTPL 110 (231)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred cCCCCCCCHHHHHHHcCcHHHHHHHHHh--CCCCCCc-CCCCCCHHHHHHHcCHHHHHHHHHHcCCCC-CCCCCCCCCHH
Confidence 4577899999999999999999999987 3344443 556678889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG 173 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~ 173 (263)
|+|+..|+.+++++|+++++++ ..++.+++..|+.. +..++.+|.+|.||||+|++.
T Consensus 111 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~g~t~L~~A~~~------- 182 (231)
T 3aji_A 111 HYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFY-KASTNIQDTEGNTPLHLACDE------- 182 (231)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT-TCCSCCCCTTSCCHHHHHHHT-------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhc-CCCccccCCCCCCHHHHHHHC-------
Confidence 9999999999999999999862 46788999999886 455788999999999999997
Q ss_pred cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827 174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF 235 (263)
Q Consensus 174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (263)
++.++++.|+..|++++..+..+.++.+.++.... .++..+|+..++|+
T Consensus 183 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~-------------~~i~~lL~~~~a~i 231 (231)
T 3aji_A 183 ERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLG-------------LILKRLAEGEEASM 231 (231)
T ss_dssp TCHHHHHHHHHTTCCSCCCCTTSCCHHHHSCHHHH-------------HHHHHHHHHHHHCC
T ss_pred CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhhHH-------------HHHHHHHccccccC
Confidence 67899999999999998876655555544433333 67788888888875
No 20
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=4.2e-25 Score=205.07 Aligned_cols=206 Identities=18% Similarity=0.119 Sum_probs=145.8
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|++++|++|++. +..++.. +..+....++||..|+.+++++|+++|+++ +.+|.+|+|||
T Consensus 9 ~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~--g~~~~~~-~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L 84 (437)
T 1n11_A 9 GGGESGLTPLHVASFMGHLPIVKNLLQR--GASPNVS-NVKVETPLHMAARAGHTEVAKYLLQNKAKV-NAKAKDDQTPL 84 (437)
T ss_dssp ------CCHHHHHHHHTCHHHHHHHHHT--TCCSCCS-SSCCCCHHHHHHHHTCHHHHHHHHHHTCCS-SCCCTTSCCHH
T ss_pred ccCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCCCCC-CCCCCCCCCHH
Confidence 4577899999999999999999999987 2333333 445677788999999999999999999994 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG 173 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~ 173 (263)
|+|+..|+.++|++|+++|+++ ..++.+++..|+..+.. ....+..|.||||+|++.
T Consensus 85 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~g~t~L~~A~~~------- 156 (437)
T 1n11_A 85 HCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEAS-QACMTKKGFTPLHVAAKY------- 156 (437)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-SCCCCTTSCCHHHHHHHT-------
T ss_pred HHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC-CcCCCCCCCCHHHHHHHc-------
Confidence 9999999999999999988862 45778888888877543 466788888999988887
Q ss_pred cchHHHHHHcccCCCCCCCCCCCCCCCCCCC----------------Chh--hhhhhccccccccc--hhhhHHHHhhhc
Q 037827 174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENV----------------DGD--LEKQLSETSHSAFG--FELAYLLLHWFV 233 (263)
Q Consensus 174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~----------------~~~--~~~~~~~~~~~~~~--~~~~~~~~~~~~ 233 (263)
+++++++.|+..+++++..+..+.++.+.++ +.+ ...+.+.+.+++.. .++...|+..|+
T Consensus 157 g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~ 236 (437)
T 1n11_A 157 GKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 236 (437)
T ss_dssp TCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 6778888888888888776543333222211 100 01111222223322 456666777777
Q ss_pred cc----cccCCccceec
Q 037827 234 SF----RVSTTPLTLAT 246 (263)
Q Consensus 234 ~~----~~~~~~~~~~~ 246 (263)
+. ..+.|||++|.
T Consensus 237 ~~~~~~~~g~t~L~~A~ 253 (437)
T 1n11_A 237 SANAESVQGVTPLHLAA 253 (437)
T ss_dssp CTTCCCTTCCCHHHHHH
T ss_pred CCCCCCCCCCCHHHHHH
Confidence 77 56788888885
No 21
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=1.2e-24 Score=188.42 Aligned_cols=196 Identities=15% Similarity=0.085 Sum_probs=155.9
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR 110 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~ 110 (263)
+.+|.++||.|+..|++++++.|++. . ..++...+..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus 2 ~~~g~~~L~~A~~~g~~~~v~~Ll~~-g-~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~ 78 (285)
T 1wdy_A 2 AVEDNHLLIKAVQNEDVDLVQQLLEG-G-ANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADP-VLRKKNGATPFLL 78 (285)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHHHT-T-CCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHH
T ss_pred CcccchHHHHHHHcCCHHHHHHHHHc-C-CCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHH
Confidence 45689999999999999999999997 3 3344443556678889999999999999999999995 9999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccc----------cCCCchHHHHHhc
Q 037827 111 AAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAE----------IAGTGKILELLSK 165 (263)
Q Consensus 111 Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~----------D~~G~TPLHlAA~ 165 (263)
|+..|+.+++++|+++|+++ ..+..+++..|+..+.. ++.. +..|.||||+|++
T Consensus 79 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-~~~~~~~~~~~~~~~~~g~t~L~~A~~ 157 (285)
T 1wdy_A 79 AAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN-VNLRRKTKEDQERLRKGGATALMDAAE 157 (285)
T ss_dssp HHHHTCHHHHHHHHHTTCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-TTCCCCCCHHHHHTTCCCCCHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcCCCCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCC-cccccccHHHHHhhccCCCcHHHHHHH
Confidence 99999999999999999862 57888999999988654 3444 7889999999999
Q ss_pred CCCCCcCCcchHHHHHHccc-CCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCC
Q 037827 166 RPKAFASGIRLGYWKGLLYQ-WIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTT 240 (263)
Q Consensus 166 ~~~~f~s~~~~~~~~~li~~-~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 240 (263)
. ++.++++.|+.. +.+++..+..+.++.+.++..... ....++..+|+..|+++ +.+.|
T Consensus 158 ~-------~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~---------~~~~~i~~~Ll~~g~~~~~~~~~g~t 221 (285)
T 1wdy_A 158 K-------GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDD---------SDVEAITHLLLDHGADVNVRGERGKT 221 (285)
T ss_dssp H-------TCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCT---------TTHHHHHHHHHHTTCCSSCCCTTSCC
T ss_pred c-------CCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHcccc---------chHHHHHHHHHHcCCCCCCcCCCCCc
Confidence 7 678999999987 888887765443332221100000 00045677888999998 67999
Q ss_pred ccceec
Q 037827 241 PLTLAT 246 (263)
Q Consensus 241 ~~~~~~ 246 (263)
|||+|.
T Consensus 222 ~L~~A~ 227 (285)
T 1wdy_A 222 PLILAV 227 (285)
T ss_dssp HHHHHH
T ss_pred HHHHHH
Confidence 999995
No 22
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.92 E-value=9.8e-25 Score=202.61 Aligned_cols=192 Identities=18% Similarity=0.127 Sum_probs=132.9
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH 109 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh 109 (263)
.+..|+||||.|+..|+.++++.|++. +...... +..|....++|+..|+.+++++|++.|+++ +.+|..|+||||
T Consensus 175 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~ 250 (437)
T 1n11_A 175 AGKNGLTPLHVAVHHNNLDIVKLLLPR--GGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQYGGSA-NAESVQGVTPLH 250 (437)
T ss_dssp CCSSCCCHHHHHHHTTCHHHHHHHGGG--TCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHH
Confidence 344566666666666666666666655 1222222 233455566788888888888888888874 778888888888
Q ss_pred HHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCc
Q 037827 110 RAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGI 174 (263)
Q Consensus 110 ~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~ 174 (263)
+|+..|+.++|++|+++++++ ..++.+++..|++.+ ..++.+|..|.||||+|+++ +
T Consensus 251 ~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-------g 322 (437)
T 1n11_A 251 LAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHG-VMVDATTRMGYTPLHVASHY-------G 322 (437)
T ss_dssp HHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHT-CCTTCCCSSCCCHHHHHHHS-------S
T ss_pred HHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCC-ccCCCCCCCCCCHHHHHHHc-------C
Confidence 888888888888888777652 456677777777764 44577788888888888876 5
Q ss_pred chHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827 175 RLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 175 ~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
+.++++.|+..|++++..+..+.++.+.++ .....++..+|+..|+|. +.++|||++|.
T Consensus 323 ~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~-------------~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 323 NIKLVKFLLQHQADVNAKTKLGYSPLHQAA-------------QQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp CSHHHHHHHHTTCCTTCCCTTSCCHHHHHH-------------HTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHH
T ss_pred cHHHHHHHHhcCCCCCCCCCCCCCHHHHHH-------------HCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence 668888888888888777654443332222 122366777888899998 78999999995
No 23
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.91 E-value=2.1e-24 Score=182.15 Aligned_cols=175 Identities=13% Similarity=0.013 Sum_probs=126.9
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH 109 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh 109 (263)
.+.+|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++++..++.+|..|+||||
T Consensus 21 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~ 97 (223)
T 2f8y_A 21 TDRTGETALHLAARYSRSDAAKRLLEA--SADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLI 97 (223)
T ss_dssp CTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHBTTSCTTCCCTTCCCHHH
T ss_pred cCCCCCchHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCcHHH
Confidence 367899999999999999999999987 3344333 5566788899999999999999999998336999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCC
Q 037827 110 RAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPV 189 (263)
Q Consensus 110 ~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v 189 (263)
+|+..|+.+++++|++++++ ++.+|.+|.||||+|+.. ++.++++.|+..|+++
T Consensus 98 ~A~~~~~~~~~~~Ll~~g~~-------------------~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~ 151 (223)
T 2f8y_A 98 LAARLAVEGMLEDLINSHAD-------------------VNAVDDLGKSALHWAAAV-------NNVDAAVVLLKNGANK 151 (223)
T ss_dssp HHHHHTCHHHHHHHHHTTCC-------------------TTCBCTTSCBHHHHHHHT-------TCHHHHHHHHHTTCCT
T ss_pred HHHHhCcHHHHHHHHHcCCC-------------------CcCcCCCCCcHHHHHHHc-------CCHHHHHHHHHcCCCC
Confidence 99999999999999765443 445566666777766665 4566666666666666
Q ss_pred CCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827 190 QEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
+..+..+.++.+.++.. ...++..+|+..|++. +.+.|||++|.
T Consensus 152 ~~~~~~g~t~L~~A~~~-------------~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~ 199 (223)
T 2f8y_A 152 DMQNNREETPLFLAARE-------------GSYETAKVLLDHFANRDITDHMDRLPRDIAQ 199 (223)
T ss_dssp TCCCTTCCCHHHHHHHH-------------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred CCcCCCCcCHHHHHHHc-------------CCHHHHHHHHHcCCCCccccccCCCHHHHHH
Confidence 65543333332222211 1245555666666666 45667777764
No 24
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.91 E-value=8.8e-25 Score=188.42 Aligned_cols=186 Identities=13% Similarity=-0.004 Sum_probs=139.5
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+.++.||||.|+..|+.++|+.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 16 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~-n~~d~~g~tpL 91 (229)
T 2vge_A 16 RARLNPLVLLLDAALTGELEVVQQAVKE--MNDPSQP-NEEGITALHNAICGANYSIVDFLITAGANV-NSPDSHGWTPL 91 (229)
T ss_dssp CTTSCHHHHHHHHHHHTCHHHHHHHHHH--SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred ccccchhHHHHHHHHcCCHHHHHHHHhc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHH
Confidence 3467789999999999999999999987 3444444 566788889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc-CCCchHHHHH--hcCCCCCcCCcchHHHHHHccc
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI-AGTGKILELL--SKRPKAFASGIRLGYWKGLLYQ 185 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D-~~G~TPLHlA--A~~~~~f~s~~~~~~~~~li~~ 185 (263)
|+|+..|+.++|++|++.|+ .++.+| .+|.||||+| +.. ++.++++.|+..
T Consensus 92 h~A~~~g~~~~v~~Ll~~ga-------------------~~~~~~~~~g~tpL~~A~a~~~-------~~~~~v~~Ll~~ 145 (229)
T 2vge_A 92 HCAASCNDTVICMALVQHGA-------------------AIFATTLSDGATAFEKCDPYRE-------GYADCATYLADV 145 (229)
T ss_dssp HHHHHTTCHHHHHHHHTTTC-------------------CTTCCCSSTTCCTGGGCCTTST-------THHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCC-------------------CcccccCCCCCCHHHHHHHHhc-------ChHHHHHHHHHc
Confidence 99999999999999975443 345554 6999999999 665 788999999999
Q ss_pred CCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc------cccCCccceec-------------
Q 037827 186 WIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF------RVSTTPLTLAT------------- 246 (263)
Q Consensus 186 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~------------- 246 (263)
|++++..+..+.++.+..+.... ..+|+..|++. ..|.|||++|.
T Consensus 146 ga~~~~~~~~~~~~l~~~~~~~~----------------~~~ll~~ga~~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l 209 (229)
T 2vge_A 146 EQSMGLMNSGAVYALWDYSAEFG----------------DELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYF 209 (229)
T ss_dssp HHHTTTSGGGEEEESSCBCCSST----------------TBCCBCTTCEEEEEESSCTTCSSEEEEEETTEEEEEEGGGE
T ss_pred CCCcccccCCchHHHHHHhhccc----------------cccCccccccccccccCCCcccHHHHHHHcCCcceeehhhh
Confidence 99998886444333332222221 13556778873 56999999992
Q ss_pred ---cccccCchhhhhhh
Q 037827 247 ---NDVRLPHSKIQYLH 260 (263)
Q Consensus 247 ---~~~~~~~~~~~~~~ 260 (263)
+.++-|.||+..-|
T Consensus 210 ~~~p~~~~~~~~~~~~~ 226 (229)
T 2vge_A 210 GLFPRVKPQRSKVKHHH 226 (229)
T ss_dssp ESSCCCC----------
T ss_pred hhCCCCCCchhhccccc
Confidence 56677777765443
No 25
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.91 E-value=3.2e-24 Score=181.55 Aligned_cols=194 Identities=16% Similarity=0.057 Sum_probs=156.2
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH 109 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh 109 (263)
.|..+.++|+.|+..|+.++++.|++. +..++.. +..|..+.++|+..|+.+++++|+++|+++....+..|+||||
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~ 81 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEA--GYDVRQP-DKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLH 81 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHH
T ss_pred cccccchHHHHHHHcCChHHHHHHHHc--CCCcCCC-CCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhH
Confidence 467788999999999999999999997 3344333 5566788889999999999999999999964455667999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCc
Q 037827 110 RAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGI 174 (263)
Q Consensus 110 ~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~ 174 (263)
+|+..|+.+++++|++.++++ ..+..+++..|++.+ ..++.+|.+|.||||+|+.++ .
T Consensus 82 ~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~-~~~~~~~~~g~t~l~~a~~~~------~ 154 (240)
T 3eu9_A 82 WATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG-QDVDMMDQNGMTPLMWAAYRT------H 154 (240)
T ss_dssp HHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHHC------C
T ss_pred HHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcC-CCccccCCCCCcHHHHHHHhC------C
Confidence 999999999999999998862 567889999999874 446788999999999999763 3
Q ss_pred chHHHHHHcccCCCCCCCCC-CCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc----cccCCccceec
Q 037827 175 RLGYWKGLLYQWIPVQEEYN-PHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 175 ~~~~~~~li~~~~~v~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
...+++.|+..+.+++..+. .+.++.+.++ .....++..+|+..|+|+ +.+.|||++|.
T Consensus 155 ~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~-------------~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~ 218 (240)
T 3eu9_A 155 SVDPTRLLLTFNVSVNLGDKYHKNTALHWAV-------------LAGNTTVISLLLEAGANVDAQNIKGESALDLAK 218 (240)
T ss_dssp SSTTHHHHHHTTCCTTCCCTTTCCCHHHHHH-------------HHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHH
T ss_pred hHHHHHHHHhcCCCcchhhccCCCcHHHHHH-------------HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHH
Confidence 46889999999988887754 3333332222 222367788899999999 78899999995
No 26
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=99.91 E-value=1.8e-23 Score=176.79 Aligned_cols=172 Identities=15% Similarity=-0.044 Sum_probs=148.4
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC--CCCCCCCCCCCCcH
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE--ADLPNVRDEENLLP 107 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g--a~l~~~~d~~G~TP 107 (263)
.+..|+||||.|+..|+.++++.|++.+....+....+..|....++|+..|+.+++++|+++| +++ +.+|..|+||
T Consensus 32 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~g~t~ 110 (228)
T 2dzn_A 32 KDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDL-NKITNQGVTC 110 (228)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSCCCT-TCCCTTCCCH
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccc-ccCCcCCCCH
Confidence 5788999999999999999999999982112333323556788889999999999999999999 884 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS 172 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s 172 (263)
||+|+..|+.+++++|+++|+++ ..+..+++..|++.++..++.+|.+|.||||+|++.
T Consensus 111 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~------ 184 (228)
T 2dzn_A 111 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE------ 184 (228)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT------
T ss_pred HHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc------
Confidence 99999999999999999999862 578899999999887677889999999999999997
Q ss_pred CcchHHHHHHc-ccCCCCCCCCCCCCCCCCCCCChhhh
Q 037827 173 GIRLGYWKGLL-YQWIPVQEEYNPHAHAHSENVDGDLE 209 (263)
Q Consensus 173 ~~~~~~~~~li-~~~~~v~~~~~~~~~~~~~~~~~~~~ 209 (263)
++.++++.|+ ..|++++..+..+.++.+.++..+..
T Consensus 185 -~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~~~~ 221 (228)
T 2dzn_A 185 -GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNEQVK 221 (228)
T ss_dssp -TCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSSTTHH
T ss_pred -CCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHHHHH
Confidence 6789999999 88999999988787787777766543
No 27
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.91 E-value=1.3e-23 Score=174.55 Aligned_cols=163 Identities=16% Similarity=0.067 Sum_probs=137.7
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827 32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA 111 (263)
Q Consensus 32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A 111 (263)
..+.+|||.|+..|+.+.++.|+.. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l~~A 79 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQD-TTYQVDEV-DTEGNTPLNIAVHNNDIEIAKALIDRGADI-NLQNSISDSPYLYA 79 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTC-TTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHc-CCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 4578999999999999999999998 55455554 556788889999999999999999999995 99999999999999
Q ss_pred HHcCCHHHHHHHHh-CCCC----------C-----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcc
Q 037827 112 AKQGQRNVVCYLLE-KTRA----------P-----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIR 175 (263)
Q Consensus 112 a~~g~~evv~~Ll~-~~a~----------p-----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~ 175 (263)
+..|+.+++++|+. .+.+ | ..++.+++..|++.++..++.+|.+|.||||+|+..+.. ..++
T Consensus 80 ~~~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~--~~~~ 157 (201)
T 3hra_A 80 GAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREG--NQLY 157 (201)
T ss_dssp HHTTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCC--SHHH
T ss_pred HHcCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccc--hhhH
Confidence 99999999999995 4433 1 678899999999998677899999999999999987431 1234
Q ss_pred hHHHHHHcccCCCCCCCCCCCCCC
Q 037827 176 LGYWKGLLYQWIPVQEEYNPHAHA 199 (263)
Q Consensus 176 ~~~~~~li~~~~~v~~~~~~~~~~ 199 (263)
.++++.|+..|++++..+..+.++
T Consensus 158 ~~~v~~Ll~~ga~~~~~~~~g~t~ 181 (201)
T 3hra_A 158 QDIVKLLMENGADQSIKDNSGRTA 181 (201)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred HHHHHHHHHCCCCCCccCCCCCCH
Confidence 899999999999998876544433
No 28
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.90 E-value=3.3e-23 Score=176.25 Aligned_cols=168 Identities=13% Similarity=0.031 Sum_probs=145.9
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC----CCCCCCCCCC
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEA----DLPNVRDEEN 104 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga----~l~~~~d~~G 104 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|++.++ + ++.+|..|
T Consensus 41 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~-~~~~~~~g 116 (241)
T 1k1a_A 41 IYNNLRQTPLHLAVITTLPSVVRLLVTA--GASPMAL-DRHGQTAAHLACEHRSPTCLRALLDSAAPGTLD-LEARNYDG 116 (241)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCTTSCC-TTCCCTTS
T ss_pred cccccCCCHHHHHHHcCCHHHHHHHHHc--CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-ccccCcCC
Confidence 4567899999999999999999999987 3444333 5566888899999999999999999998 7 49999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCC
Q 037827 105 LLPIHRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPK 168 (263)
Q Consensus 105 ~TPLh~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~ 168 (263)
+||||+|+..|+.+++++|++.++++ ..+..+++..|++.+ ..++.+|.+|.||||+|++.
T Consensus 117 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-- 193 (241)
T 1k1a_A 117 LTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHG-ANVNAQMYSGSSALHSASGR-- 193 (241)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTT-CCTTCBCTTSCBHHHHHHHH--
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHc--
Confidence 99999999999999999999999862 567889999999874 55788999999999999987
Q ss_pred CCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827 169 AFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL 208 (263)
Q Consensus 169 ~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~ 208 (263)
++.++++.|+..|++++..+..+.++.+.++....
T Consensus 194 -----~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 228 (241)
T 1k1a_A 194 -----GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRV 228 (241)
T ss_dssp -----TCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHH
T ss_pred -----CCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCc
Confidence 67899999999999999988777777777776655
No 29
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.90 E-value=7.4e-24 Score=172.58 Aligned_cols=160 Identities=13% Similarity=0.077 Sum_probs=123.3
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q 037827 34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAK 113 (263)
Q Consensus 34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~ 113 (263)
+.+|||.|+..|+.+.++.|++. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 78 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRK-GDNLVNKP-DERGFTPLIWASAFGEIETVRFLLEWGADP-HILAKERESALSLAST 78 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTT-CSGGGGCC-CTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTCCCHHHHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHc-CcccccCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-hhhcccCCCHHHHHHH
Confidence 46899999999999999999998 55545444 566788889999999999999999999995 9999999999999999
Q ss_pred cCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCC
Q 037827 114 QGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEY 193 (263)
Q Consensus 114 ~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~ 193 (263)
.|+.+++++|+++++ .++.+|.+|.||||+|++. ++.++++.|+..|++++..+
T Consensus 79 ~~~~~~v~~Ll~~g~-------------------~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~~ 132 (172)
T 3v30_A 79 GGYTDIVGLLLERDV-------------------DINIYDWNGGTPLLYAVRG-------NHVKCVEALLARGADLTTEA 132 (172)
T ss_dssp TTCHHHHHHHHTTTC-------------------CTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCC
T ss_pred CCCHHHHHHHHHcCC-------------------CCCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCccccC
Confidence 999999999975543 3566677888888888876 66788888888887777665
Q ss_pred CCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827 194 NPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF 235 (263)
Q Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (263)
..+.++.+.++. ....++..+|+..++++
T Consensus 133 ~~g~t~l~~A~~-------------~~~~~~~~~L~~~~~~~ 161 (172)
T 3v30_A 133 DSGYTPMDLAVA-------------LGYRKVQQVIENHILKL 161 (172)
T ss_dssp TTSCCHHHHHHH-------------HTCHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHH-------------hCcHHHHHHHHHHHHHH
Confidence 433333322221 12256677777777776
No 30
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.90 E-value=2.1e-23 Score=181.23 Aligned_cols=165 Identities=11% Similarity=-0.009 Sum_probs=135.4
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC-----------
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL----------- 96 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l----------- 96 (263)
...+..|+||||+|+..|+.++|+.|++. +..++.. +..|....++|+..|+.+++++|+++|++.
T Consensus 39 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~ 115 (282)
T 1oy3_D 39 DLQNDLGQTALHLAAILGEASTVEKLYAA--GAGVLVA-ERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQ 115 (282)
T ss_dssp GCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSSCC-CTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC-------
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhc
Confidence 34677899999999999999999999997 3444444 556788889999999999999999988651
Q ss_pred -----------------------------------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------
Q 037827 97 -----------------------------------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP----------- 130 (263)
Q Consensus 97 -----------------------------------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p----------- 130 (263)
++.+|..|+||||+|+..|+.++|++|+++|+++
T Consensus 116 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tp 195 (282)
T 1oy3_D 116 SQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTP 195 (282)
T ss_dssp ----------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCH
T ss_pred ccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCH
Confidence 3788999999999999999999999999999862
Q ss_pred -----CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCC
Q 037827 131 -----LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSEN 203 (263)
Q Consensus 131 -----~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~ 203 (263)
..++.+++..|+.. +..++.+|.+|.||||+|+++ ++.++++.|+..|++++..+..+.+|.+.+
T Consensus 196 L~~A~~~~~~~~v~~Ll~~-gad~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~a 265 (282)
T 1oy3_D 196 LHLAVEAQAASVLELLLKA-GADPTARMYGGRTPLGSALLR-------PNPILARLLRAHGAPEPEDGGDKLSPCSSS 265 (282)
T ss_dssp HHHHHHTTCHHHHHHHHHT-TCCTTCCCTTSCCHHHHHHTS-------SCHHHHHHHHHTTCCCCCCC----------
T ss_pred HHHHHHcCCHHHHHHHHHc-CCCCcccccCCCCHHHHHHHc-------CCcHHHHHHHHcCCCcCcCCCccccccccc
Confidence 56788999999987 455789999999999999987 778999999999999999986665555543
No 31
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.90 E-value=1.2e-23 Score=178.85 Aligned_cols=184 Identities=14% Similarity=-0.006 Sum_probs=139.4
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCC----CCCCCCCCcHH
Q 037827 33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLP----NVRDEENLLPI 108 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~----~~~d~~G~TPL 108 (263)
.|+||||.|+..|+.++++.|++. .+..++.. +..|....++||..|+.+++++|+++|+++. +.+|..|+|||
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~-~g~~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L 79 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKF-EGCEVHQR-GAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTAL 79 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTT-TCSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHh-cCCCcccC-CCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHH
Confidence 578999999999999999999987 56666555 5667888899999999999999999998731 66788999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC----------------------------CCCCHHHHHHHHHhCCCccccccCCCchHH
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP----------------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKIL 160 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p----------------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPL 160 (263)
|+|+..|+.++|++|+++|+++ ..++.+++..|++. +..++.+|.+|.|||
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~d~~g~t~L 158 (232)
T 2rfa_A 80 HIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH-GADIRAQDSLGNTVL 158 (232)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHT-TCCTTCCCTTSCCHH
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCCCCCCCCHH
Confidence 9999999999999999998862 23567788888877 455788999999999
Q ss_pred HHHhcCCCCCcCCcchHHH----HHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhcccccccc--chhhhHHHHhhhcc
Q 037827 161 ELLSKRPKAFASGIRLGYW----KGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAF--GFELAYLLLHWFVS 234 (263)
Q Consensus 161 HlAA~~~~~f~s~~~~~~~----~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~ 234 (263)
|+|+.. ++.+++ +.|+..|++++...-. . .. +..+.+.+.++.. ..++..+|+..|++
T Consensus 159 ~~A~~~-------~~~~~~~~i~~~Ll~~g~~~~~~~~~--~----~~---~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~ 222 (232)
T 2rfa_A 159 HILILQ-------PNKTFACQMYNLLLSYDGGDHLKSLE--L----VP---NNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222 (232)
T ss_dssp HHHHTC-------SCHHHHHHHHHHHHHTTCSCSSCCGG--G----CC---CTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred HHHHHc-------CChHHHHHHHHHHHhcCCchhhhhhh--c----cC---CCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence 999987 556666 9999998876422100 0 00 1111222333333 36667778888877
Q ss_pred c
Q 037827 235 F 235 (263)
Q Consensus 235 ~ 235 (263)
.
T Consensus 223 ~ 223 (232)
T 2rfa_A 223 I 223 (232)
T ss_dssp C
T ss_pred c
Confidence 6
No 32
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.90 E-value=4.5e-23 Score=166.85 Aligned_cols=148 Identities=14% Similarity=0.095 Sum_probs=124.3
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+.++.++||.|+..|+.+.++.|++. .+...... +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 3 ~~~~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 79 (165)
T 3twr_A 3 MGNSEADRQLLEAAKAGDVETVKKLCTV-QSVNCRDI-EGRQSTPLHFAAGYNRVSVVEYLLQHGADV-HAKDKGGLVPL 79 (165)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHCCT-TTTTCCCT-TTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCcchhhHHHHHHHHhCCHHHHHHHHHc-CCCCcccc-ccCCCCHHHHHHHcChHHHHHHHHhcCCCC-CccCCCCCCHH
Confidence 3567889999999999999999999987 45444333 445578888999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP 188 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~ 188 (263)
|+|+..|+.++|++|++++ ..++.+|.+|.||||+|++. ++.++++.|+..|++
T Consensus 80 ~~A~~~~~~~~v~~Ll~~g-------------------~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~ 133 (165)
T 3twr_A 80 HNACSYGHYEVAELLVKHG-------------------AVVNVADLWKFTPLHEAAAK-------GKYEICKLLLQHGAD 133 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTT-------------------CCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCC
T ss_pred HHHHHcCcHHHHHHHHhCC-------------------CCCCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCC
Confidence 9999999999999997543 34577889999999999997 678999999999999
Q ss_pred CCCCCCCCCCCCCCCCC
Q 037827 189 VQEEYNPHAHAHSENVD 205 (263)
Q Consensus 189 v~~~~~~~~~~~~~~~~ 205 (263)
++..+..+.++.+.++.
T Consensus 134 ~~~~~~~g~t~l~~a~~ 150 (165)
T 3twr_A 134 PTKKNRDGNTPLDLVKD 150 (165)
T ss_dssp TTCCCTTSCCTGGGSCT
T ss_pred CcccCCCCCChhHhHhc
Confidence 99888777666665544
No 33
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.90 E-value=9.7e-25 Score=200.34 Aligned_cols=210 Identities=15% Similarity=0.094 Sum_probs=162.1
Q ss_pred hhhc-ccChHHHHHHHHcCCHHHHHHHHh-------ccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCC
Q 037827 28 IIKD-IANYKQVTRYLLEDDWKGLEDYIM-------SKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNV 99 (263)
Q Consensus 28 ~~~~-~~~~t~Lh~Aa~~G~~e~v~~Ll~-------~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~ 99 (263)
...+ ..|+||||+|+..|+.++++.|+. . .+..++.. +..|....++||..|+.++|++|+++|+++ +.
T Consensus 118 n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~-~ga~vn~~-d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~-~~ 194 (373)
T 2fo1_E 118 NIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIA-AGADVNAM-DCDENTPLMLAVLARRRRLVAYLMKAGADP-TI 194 (373)
T ss_dssp TTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHH-TCCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCS-CC
T ss_pred cccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHh-cCCCCcCC-CCCCCCHHHHHHHcChHHHHHHHHHCCCCC-cc
Confidence 3455 689999999999999998888873 2 34555554 566788889999999999999999999995 99
Q ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHhCC---CCC---------------CCC---CHHHHHHHHHhCCCcc-------cc
Q 037827 100 RDEENLLPIHRAAKQGQRNVVCYLLEKT---RAP---------------LDG---SDDVAYGLLRKHPKLA-------WA 151 (263)
Q Consensus 100 ~d~~G~TPLh~Aa~~g~~evv~~Ll~~~---a~p---------------~~~---~~~va~~Ll~~~~~~~-------~~ 151 (263)
+|..|+||||+|+..|+.++|++|+.++ .+. ..+ ..+++..|+..+.... ..
T Consensus 195 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~ 274 (373)
T 2fo1_E 195 YNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDS 274 (373)
T ss_dssp CCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSS
T ss_pred cCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCc
Confidence 9999999999999999999999999876 221 233 7889999998865432 12
Q ss_pred ccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC-CCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh
Q 037827 152 EIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW-IPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH 230 (263)
Q Consensus 152 ~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~-~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (263)
+|..|.||||+|+.. ++.++++.|+..+ ++++..+..+.++.+.++. ....++..+|+.
T Consensus 275 ~d~~g~t~Lh~A~~~-------g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~~A~~-------------~g~~~iv~~Ll~ 334 (373)
T 2fo1_E 275 EKYKGRTALHYAAQV-------SNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQ-------------EGRIEVVMYLIQ 334 (373)
T ss_dssp SSCCCCCTHHHHHSS-------CCHHHHHHHHHHSCCCTTCCCTTCCCHHHHHHH-------------HTCHHHHHHHHH
T ss_pred ccccCCCHHHHHHHh-------CCHHHHHHHHHhcCCCccCcCCCCCCHHHHHHH-------------cCCHHHHHHHHH
Confidence 578999999999997 7789999999776 8888876555444433222 223677788899
Q ss_pred hhccc----cccCCccceeccccccCchhhhhhhhc
Q 037827 231 WFVSF----RVSTTPLTLATNDVRLPHSKIQYLHQY 262 (263)
Q Consensus 231 ~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~ 262 (263)
.|+|+ +.+.|||++|...=. ..-++||+++
T Consensus 335 ~gad~~~~d~~g~t~l~~A~~~g~--~~iv~~Ll~~ 368 (373)
T 2fo1_E 335 QGASVEAVDATDHTARQLAQANNH--HNIVDIFDRC 368 (373)
T ss_dssp TTCCSSCCCSSSCCHHHHHHHTTC--HHHHHHHHTT
T ss_pred cCCCccCCCCCCCCHHHHHHHcCC--HHHHHHHHhc
Confidence 99998 789999999962111 2345666654
No 34
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.90 E-value=6.1e-23 Score=168.63 Aligned_cols=162 Identities=15% Similarity=-0.021 Sum_probs=135.1
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827 32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA 111 (263)
Q Consensus 32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A 111 (263)
.++.++||.|+..|+.+.++.|++. .+..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 79 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDN-TENDLNQG-DDHGFSPLHWACREGRSAVVEMLIMRGARI-NVMNRGDDTPLHLA 79 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHC-TTSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhc-Cccccccc-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 3568899999999999999999998 56656554 556788889999999999999999999995 99999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCC
Q 037827 112 AKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQE 191 (263)
Q Consensus 112 a~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~ 191 (263)
+..|+.++|++|+++|+ .++.+|.+|.||||+|+.. ++.++++.|+..|++++.
T Consensus 80 ~~~~~~~~v~~Ll~~g~-------------------~~~~~d~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~ 133 (179)
T 3f6q_A 80 ASHGHRDIVQKLLQYKA-------------------DINAVNEHGNVPLHYACFW-------GQDQVAEDLVANGALVSI 133 (179)
T ss_dssp HHTTCHHHHHHHHHTTC-------------------CTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCSSB
T ss_pred HHcCCHHHHHHHHHcCC-------------------CCCccCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCcch
Confidence 99999999999975433 3567788999999999987 677999999999999988
Q ss_pred CCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827 192 EYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF 235 (263)
Q Consensus 192 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (263)
.+..+.++.+.++.... .++..+|+..|+++
T Consensus 134 ~~~~g~tpl~~A~~~~~-------------~~~~~~L~~~g~~~ 164 (179)
T 3f6q_A 134 CNKYGEMPVDKAKAPLR-------------ELLRERAEKMGQNL 164 (179)
T ss_dssp CCTTSCCGGGGSCHHHH-------------HHHHHHHHHTTCCC
T ss_pred hccCCCCcHHHHHHHHH-------------HHHHHHHHHhhcCc
Confidence 87777777666655544 67788888888888
No 35
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.90 E-value=5.5e-24 Score=188.47 Aligned_cols=200 Identities=10% Similarity=0.000 Sum_probs=151.5
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP 107 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP 107 (263)
...|.+|+||||.|+..|+.++|+.|++. +..++.. +|....++||..|+.+++++|+++|+++ +.+|..|+||
T Consensus 25 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~---~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~t~ 98 (285)
T 3kea_A 25 FKADVHGHSASYYAIADNNVRLVCTLLNA--GALKNLL---ENEFPLHQAATLEDTKIVKILLFSGLDD-SQFDDKGNTA 98 (285)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT--TGGGSCC---TTCCHHHHHTTSSSCHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred CccCCCCCCHHHHHHHcCCHHHHHHHHhC--CCCCCCC---CCCCHHHHHHHcCCHHHHHHHHHCCCCC-CCcCCCCCcH
Confidence 36778899999999999999999999987 3444333 4677888999999999999999999994 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccC-CCchHHHHHhcCCCCC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIA-GTGKILELLSKRPKAF 170 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~-~G~TPLHlAA~~~~~f 170 (263)
||+|+..|+.++|++|+++|+++ ..++.+++..|+..++.. .|. .|.||||+|++.
T Consensus 99 L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~---~~~~~g~t~L~~A~~~---- 171 (285)
T 3kea_A 99 LYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST---FDLAILLSCIHITIKN---- 171 (285)
T ss_dssp HHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTT---CCCSTHHHHHHHHHHT----
T ss_pred HHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcc---ccccCCccHHHHHHHc----
Confidence 99999999999999999998862 456788888888876543 233 899999999987
Q ss_pred cCCcchHHHHHHcccCCCCCCCCCCCCCC-CCC----------------CCChhhhhhhccccccccchhhhHHHHhhhc
Q 037827 171 ASGIRLGYWKGLLYQWIPVQEEYNPHAHA-HSE----------------NVDGDLEKQLSETSHSAFGFELAYLLLHWFV 233 (263)
Q Consensus 171 ~s~~~~~~~~~li~~~~~v~~~~~~~~~~-~~~----------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (263)
++.++++.|+..|++++..+..+.++ .+. ++|.+... .........++..+|+..|+
T Consensus 172 ---g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~---~~a~~~~~~~iv~~Ll~~g~ 245 (285)
T 3kea_A 172 ---GHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN---LENVLLDDAEIAKMIIEKHV 245 (285)
T ss_dssp ---TCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT---GGGGTTTCHHHHHHHHHHHH
T ss_pred ---ChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC---hhhhhcCCHHHHHHHHHcCC
Confidence 67799999999999988887555443 222 33333211 11122334677777888888
Q ss_pred cc--cccCCccceec
Q 037827 234 SF--RVSTTPLTLAT 246 (263)
Q Consensus 234 ~~--~~~~~~~~~~~ 246 (263)
++ ....+.|.+++
T Consensus 246 ~~~~~~~~~~~~~~~ 260 (285)
T 3kea_A 246 EYKSDSYTKDLDIVK 260 (285)
T ss_dssp HHTTCTTTTTCHHHH
T ss_pred CCCCccccchHHHHh
Confidence 87 34445555554
No 36
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.90 E-value=4.8e-23 Score=185.18 Aligned_cols=190 Identities=17% Similarity=0.035 Sum_probs=143.3
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhccCCCccccc--------------------------------ccCCcCHHHHHHHh
Q 037827 32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACI--------------------------------IVDQSSIFEFIVAS 79 (263)
Q Consensus 32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~--------------------------------i~~~g~iv~~~AA~ 79 (263)
..|+||||.|+..|+.++|+.||+. +..++.. .+..|.+..++|+.
T Consensus 57 ~~g~TpLh~A~~~g~~~iv~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~t~l~~A~~ 134 (337)
T 4g8k_A 57 EGGWTPLHNAVQMSREDIVELLLRH--GADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAV 134 (337)
T ss_dssp TTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCBCTTCCBHHHHHHH
T ss_pred CCCcCHHHHHHHcCCHHHHHHHHHc--CCchhhhccCCCchhHHHHhcccchhhHHhhhccchhhhhccCCCCHHHHHHH
Confidence 3589999999999999999999987 2222221 12223455669999
Q ss_pred CCcHHHHHHHHHcCCCCCCCC----------CCCCCcHHHHHHHcCCHHHHHHHHh-CCCCC------------------
Q 037827 80 TGKLELISTLIRYEADLPNVR----------DEENLLPIHRAAKQGQRNVVCYLLE-KTRAP------------------ 130 (263)
Q Consensus 80 ~G~~eiv~~Ll~~ga~l~~~~----------d~~G~TPLh~Aa~~g~~evv~~Ll~-~~a~p------------------ 130 (263)
.|+.+++++|+++|+++ +.+ +..|+||||+|+..|+.++|++|+. .|+++
T Consensus 135 ~~~~~~~~~ll~~ga~~-~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~~~~~~ 213 (337)
T 4g8k_A 135 YGKVKALKFLYKRGANV-NLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 213 (337)
T ss_dssp TTCHHHHHHHHHTTCCT-TCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHHS
T ss_pred cCcHHHHHHHHHcCCCc-chhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHHHHHHc
Confidence 99999999999999984 654 4569999999999999999999996 56652
Q ss_pred CCCCHH-HHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc-CCCCCCCCCCCCCCCCCCCChhh
Q 037827 131 LDGSDD-VAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ-WIPVQEEYNPHAHAHSENVDGDL 208 (263)
Q Consensus 131 ~~~~~~-va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~-~~~v~~~~~~~~~~~~~~~~~~~ 208 (263)
..+..+ ++..|++. +..++.+|.+|.||||+|++. ++.++++.|+.. +++++..+..+.++.+.++..
T Consensus 214 ~~~~~~~i~~lLl~~-gad~n~~d~~g~t~L~~a~~~-------~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~-- 283 (337)
T 4g8k_A 214 DDSDVEAITHLLLDH-GADVNVRGERGKTPLILAVEK-------KHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL-- 283 (337)
T ss_dssp CTTTHHHHHHHHHHT-TCCTTCCCGGGCCHHHHHHHT-------TCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHT--
T ss_pred CcccHHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHh-------hhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHc--
Confidence 233333 44555554 566789999999999999997 678999999874 788888776555444333222
Q ss_pred hhhhccccccccchhhhHHHHhhhccccccCCccceec
Q 037827 209 EKQLSETSHSAFGFELAYLLLHWFVSFRVSTTPLTLAT 246 (263)
Q Consensus 209 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (263)
...++..+||..|||. +.+|||+.|.
T Consensus 284 -----------g~~~iv~~Ll~~GAd~-n~~~~L~~A~ 309 (337)
T 4g8k_A 284 -----------KLKKIAELLCKRGAST-DCGDLVMTAR 309 (337)
T ss_dssp -----------TCHHHHHHHHTTSCSS-TTCCHHHHHH
T ss_pred -----------CCHHHHHHHHHCCCCC-CCCCHHHHHH
Confidence 2266778899999998 4568999995
No 37
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.89 E-value=9.2e-24 Score=191.79 Aligned_cols=181 Identities=12% Similarity=-0.052 Sum_probs=148.0
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHc----CCCCCCC-----
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRY----EADLPNV----- 99 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~----ga~l~~~----- 99 (263)
..+..|+||||.|+..|+.++|+.|++. .. ..+ ...|....++|+..|+.+++++|+++ |+++ +.
T Consensus 48 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~-g~-~~~---~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~-~~~~~~~ 121 (364)
T 3ljn_A 48 IQNRFGCTALHLACKFGCVDTAKYLASV-GE-VHS---LWHGQKPIHLAVMANKTDLVVALVEGAKERGQMP-ESLLNEC 121 (364)
T ss_dssp CCCTTCCCHHHHHHHHCCHHHHHHHHHH-CC-CCC---CBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCH-HHHHTCC
T ss_pred ccCCCCCcHHHHHHHcCCHHHHHHHHHC-CC-Ccc---ccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCH-HHHHhhc
Confidence 5678899999999999999999999998 22 222 22567788899999999999999999 8874 76
Q ss_pred ------------CCCCCCcHHHHHHHcC--CHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCc--
Q 037827 100 ------------RDEENLLPIHRAAKQG--QRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKL-- 148 (263)
Q Consensus 100 ------------~d~~G~TPLh~Aa~~g--~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~-- 148 (263)
+|..|+||||+|+..| +.++|++|++.|+++ ..++.+++..|+..+...
T Consensus 122 ~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~ 201 (364)
T 3ljn_A 122 DEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSS 201 (364)
T ss_dssp CCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSS
T ss_pred chHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhccccccc
Confidence 8999999999999999 999999999999872 678899999999986542
Q ss_pred --cccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827 149 --AWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY 226 (263)
Q Consensus 149 --~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (263)
++.+|..|.||||+|+.+ ++.++++.|+..|++++..+..+.++.+.++. ....++..
T Consensus 202 ~~~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~-------------~g~~~~v~ 261 (364)
T 3ljn_A 202 LRLDYANKQGNSHLHWAILI-------NWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVR-------------AAMVLLTK 261 (364)
T ss_dssp CCTTCCCTTCCCTTHHHHTT-------TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH-------------TCCHHHHH
T ss_pred ccccccCCCCCcHHHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-------------hChHHHHH
Confidence 678899999999999987 78899999999999998876555444332222 22366777
Q ss_pred HHHhhhccc
Q 037827 227 LLLHWFVSF 235 (263)
Q Consensus 227 ~~~~~~~~~ 235 (263)
+|+..++++
T Consensus 262 ~Ll~~~~~~ 270 (364)
T 3ljn_A 262 ELLQKTDVF 270 (364)
T ss_dssp HHHHHSCHH
T ss_pred HHHHcCCch
Confidence 888887764
No 38
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.89 E-value=1.3e-22 Score=163.08 Aligned_cols=145 Identities=14% Similarity=0.033 Sum_probs=124.9
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827 32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA 111 (263)
Q Consensus 32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A 111 (263)
....+|||.|+..|+.++++.|++. +..++.. +..|....++|+. |+.+++++|+++|+++ +.+|..|+||||+|
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~--~~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A 77 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQN--NVNVNAQ-NGFGRTALQVMKL-GNPEIARRLLLRGANP-DLKDRTGFAVIHDA 77 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTS--CCCTTCC-CTTSCCHHHHCCS-SCHHHHHHHHHTTCCT-TCCCTTSCCHHHHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhC--CCCcccc-CccCccHHHHHHc-CcHHHHHHHHHcCCCC-CCCCCCCCCHHHHH
Confidence 3467999999999999999999987 3344443 5566777788988 9999999999999995 99999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcch
Q 037827 112 AKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRL 176 (263)
Q Consensus 112 a~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~ 176 (263)
+..|+.+++++|+++++++ ..++.+++..|++.++..++.+|..|.||||+|+++ ++.
T Consensus 78 ~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~-------~~~ 150 (162)
T 1ihb_A 78 ARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLY-------GRN 150 (162)
T ss_dssp HHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHT-------TCH
T ss_pred HHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHc-------CCH
Confidence 9999999999999999862 578899999999998776788999999999999997 678
Q ss_pred HHHHHHcccCCC
Q 037827 177 GYWKGLLYQWIP 188 (263)
Q Consensus 177 ~~~~~li~~~~~ 188 (263)
++++.|+..|++
T Consensus 151 ~~~~~Ll~~GAd 162 (162)
T 1ihb_A 151 EVVSLMQANGAG 162 (162)
T ss_dssp HHHHHHHHTC--
T ss_pred HHHHHHHHhCCC
Confidence 999999998864
No 39
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.89 E-value=8e-23 Score=180.32 Aligned_cols=145 Identities=13% Similarity=0.042 Sum_probs=87.2
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH 109 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh 109 (263)
.|.+|+||||+|+..|+.++|+.|++. +..+... +..|.+..++|+..|+.+++++|+++|+++ +.+|..|+||||
T Consensus 82 ~d~~G~TpLh~A~~~g~~~~v~~Ll~~--~a~~~~~-~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~-n~~d~~g~TpL~ 157 (269)
T 4b93_B 82 TSQDGSSPLHVAALHGRADLIPLLLKH--GANAGAR-NADQAVPLHLACQQGHFQVVKCLLDSNAKP-NKKDLSGNTPLI 157 (269)
T ss_dssp CCTTSCCHHHHHHHTTCTTHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTCCCHHH
T ss_pred cCCCCCCHHHHHHHcCcHHHHHHHHhc--CCCcCcc-CCCCCCccccccccChHHHHHHHHHCCCCC-CCCCCCCCCHHH
Confidence 344455555555555555555555543 1222222 223344444555555555555555555552 555555555555
Q ss_pred HHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCC
Q 037827 110 RAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPV 189 (263)
Q Consensus 110 ~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v 189 (263)
+||..|+.++|++| ++. +..++.+|..|.||||+|+++ ++.++++.|+..|+++
T Consensus 158 ~A~~~g~~~~v~~L------------------l~~-gadvn~~~~~g~t~Lh~A~~~-------g~~~~v~~Ll~~Gad~ 211 (269)
T 4b93_B 158 YACSGGHHELVALL------------------LQH-GASINASNNKGNTALHEAVIE-------KHVFVVELLLLHGASV 211 (269)
T ss_dssp HHHHTTCGGGHHHH------------------HHT-TCCTTCBCTTSCBHHHHHHHT-------TCHHHHHHHHHTTCCS
T ss_pred HHHHCCCHHHHHHH------------------HHC-CCCCCccccCCCcHHHHHHHc-------CCHHHHHHHHHCCCCC
Confidence 55555555555555 554 344688899999999999997 7789999999999999
Q ss_pred CCCCCCCCCCCCCCC
Q 037827 190 QEEYNPHAHAHSENV 204 (263)
Q Consensus 190 ~~~~~~~~~~~~~~~ 204 (263)
+..+..+.+|.+.++
T Consensus 212 ~~~d~~G~TpL~~A~ 226 (269)
T 4b93_B 212 QVLNKRQRTAVDCAE 226 (269)
T ss_dssp CCCCTTSCCSGGGSC
T ss_pred CCcCCCCCCHHHHHH
Confidence 998877766666554
No 40
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.88 E-value=4.8e-22 Score=175.79 Aligned_cols=178 Identities=14% Similarity=0.064 Sum_probs=146.3
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+.+|+||||.|+..|+.++|+.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +..+ .|+|||
T Consensus 87 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~-~g~t~L 161 (285)
T 3d9h_A 87 IITADHVSPLHEACLGGHLSCVKILLKH--GAQVNGV-TADWHTPLFNACVSGSWDCVNLLLQHGASV-QPES-DLASPI 161 (285)
T ss_dssp EECTTCCCHHHHHHHTTCHHHHHHHHHT--TCCSSCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-SCSC-TTSCHH
T ss_pred CcCCCCCCHHHHHHHCCcHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCHHHHHHHHHHCCCCC-CCCC-CCCCHH
Confidence 4677899999999999999999999987 3444444 556778889999999999999999999995 7544 599999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG 173 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~ 173 (263)
|+|+..|+.+++++|++.++++ ..++.+++..|++.+.. ++ .|..|.||||+|++.
T Consensus 162 ~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~-~~-~~~~g~t~L~~A~~~------- 232 (285)
T 3d9h_A 162 HEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-VN-QGKGQDSPLHAVVRT------- 232 (285)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCC-TT-CCBTTBCHHHHHHHT-------
T ss_pred HHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCC-CC-CCCCCCCHHHHHHHc-------
Confidence 9999999999999999999862 67889999999988554 44 489999999999997
Q ss_pred cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhh-hccc
Q 037827 174 IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHW-FVSF 235 (263)
Q Consensus 174 ~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 235 (263)
++.++++.|+..|++++..+..+.++.+.++. ..++..+|+.+ ++++
T Consensus 233 ~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~---------------~~~~~~~Ll~~~~a~l 280 (285)
T 3d9h_A 233 ASEELACLLMDFGADTQAKNAEGKRPVELVPP---------------ESPLAQLFLEREGASL 280 (285)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTSCCGGGGSCT---------------TSHHHHHHHHHC----
T ss_pred CCHHHHHHHHHCCCCCCCcCCCCCCHHHHhcC---------------ccHHHHHHHHhhccCC
Confidence 67899999999999999988777766666551 14567777777 7776
No 41
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.88 E-value=1.5e-23 Score=181.17 Aligned_cols=189 Identities=14% Similarity=-0.021 Sum_probs=137.1
Q ss_pred cChHHHHHHHHcCCHHHH----HHHHhccCCCcccc---cccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCCCCC---
Q 037827 33 ANYKQVTRYLLEDDWKGL----EDYIMSKTPNALAC---IIVDQSSIFEFIVAST---GKLELISTLIRYEADLPNV--- 99 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v----~~Ll~~~~~~~~~~---~i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l~~~--- 99 (263)
.|+||||.|+..|+.+.| ++|++. +..++. ..+..|....++||.. |+.+++++|+++|+++ +.
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~--g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~-~~~~~ 77 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWN--SKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDS-GNPKP 77 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHT-TCSSC
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHc--CCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcc-cchhh
Confidence 478999999999999855 555555 344444 2356678888999999 9999999999999884 53
Q ss_pred --------CCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC--CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCC
Q 037827 100 --------RDEENLLPIHRAAKQGQRNVVCYLLEKTRAP--LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKA 169 (263)
Q Consensus 100 --------~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p--~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~ 169 (263)
+|..|+||||+|+..|+.++|++|+++|+++ ...... .+......|..|.||||+|++.
T Consensus 78 ~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~--------~~~~~~~~~~~g~tpL~~A~~~--- 146 (256)
T 2etb_A 78 LVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRF--------FQKHQGTCFYFGELPLSLAACT--- 146 (256)
T ss_dssp GGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGG--------GSCCSSSCCCSCSSHHHHHHHT---
T ss_pred hcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCccccccc--------ccccccccccCCCCHHHHHHHc---
Confidence 3478999999999999999999998877763 110000 0111223345599999999997
Q ss_pred CcCCcchHHHHHHcc---cCCCCCCCCCCCCCCCCCCCC---hhhhhhhccccccccchhhhHHHHhhhccc--------
Q 037827 170 FASGIRLGYWKGLLY---QWIPVQEEYNPHAHAHSENVD---GDLEKQLSETSHSAFGFELAYLLLHWFVSF-------- 235 (263)
Q Consensus 170 f~s~~~~~~~~~li~---~~~~v~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------- 235 (263)
++.++++.|+. .|++++..+..+.++.|.++. ...+..- .-.++..+|+..|+++
T Consensus 147 ----~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~-------~~~~iv~~Ll~~ga~~~~~~~~~~ 215 (256)
T 2etb_A 147 ----KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSA-------LVIHMYDGLLQMGARLCPTVQLEE 215 (256)
T ss_dssp ----TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHH-------HHHHHHHHHHHHHHHHSTTCCGGG
T ss_pred ----CCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhH-------HHHHHHHHHHHcCCCccccccccc
Confidence 78899999999 899999887666655554432 1110000 0023678888888877
Q ss_pred ---cccCCccceec
Q 037827 236 ---RVSTTPLTLAT 246 (263)
Q Consensus 236 ---~~~~~~~~~~~ 246 (263)
+.+.|||++|.
T Consensus 216 ~~d~~g~tpL~~A~ 229 (256)
T 2etb_A 216 ISNHQGLTPLKLAA 229 (256)
T ss_dssp CCCTTSCCHHHHHH
T ss_pred ccCCCCCCHHHHHH
Confidence 67999999995
No 42
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.88 E-value=5.1e-23 Score=182.24 Aligned_cols=150 Identities=12% Similarity=0.053 Sum_probs=133.3
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCC-CcHHHHH
Q 037827 33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEEN-LLPIHRA 111 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G-~TPLh~A 111 (263)
+|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..| .||||+|
T Consensus 61 ~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~g~~t~L~~A 136 (285)
T 3kea_A 61 ENEFPLHQAATLEDTKIVKILLFS--GLDDSQF-DDKGNTALYYAVDSGNMQTVKLFVKKNWRL-MFYGKTGWKTSFYHA 136 (285)
T ss_dssp TTCCHHHHHTTSSSCHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHCGGG-GGCSSSGGGSHHHHH
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhcCCCC-CccCCCCCCCHHHHH
Confidence 589999999999999999999997 3445444 556788889999999999999999999995 9999999 7999999
Q ss_pred HHcCCHHHHHHHHhCCCCC--------------CCCCHHHHHHHHHhCCCccccccCCCchH-HHHHhcCCCCCcCCcch
Q 037827 112 AKQGQRNVVCYLLEKTRAP--------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKI-LELLSKRPKAFASGIRL 176 (263)
Q Consensus 112 a~~g~~evv~~Ll~~~a~p--------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TP-LHlAA~~~~~f~s~~~~ 176 (263)
+..|+.+++++|++++++. ..++.+++..|++. +..++.+|.+|.|| ||+|++. ++.
T Consensus 137 ~~~~~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-gad~n~~~~~g~t~~L~~A~~~-------~~~ 208 (285)
T 3kea_A 137 VMLNDVSIVSYFLSEIPSTFDLAILLSCIHITIKNGHVDMMILLLDY-MTSTNTNNSLLFIPDIKLAIDN-------KDI 208 (285)
T ss_dssp HHTTCHHHHHHHHTTSCTTCCCSTHHHHHHHHHHTTCHHHHHHHHHH-HHHTCTTCCCBCCTTHHHHHHH-------TCH
T ss_pred HHcCCHHHHHHHHhCCCccccccCCccHHHHHHHcChHHHHHHHHHc-CCCCCcccCCCCChHHHHHHHc-------CCH
Confidence 9999999999999999862 57889999999988 45578899999998 9999997 678
Q ss_pred HHHHHHcccCCCCCCCCC
Q 037827 177 GYWKGLLYQWIPVQEEYN 194 (263)
Q Consensus 177 ~~~~~li~~~~~v~~~~~ 194 (263)
++++.|+..|++++..+.
T Consensus 209 ~~v~~Ll~~gad~~~~~~ 226 (285)
T 3kea_A 209 EMLQALFKYDINIYSANL 226 (285)
T ss_dssp HHHHHHTTSCBCSTTTTG
T ss_pred HHHHHHHHcCCCCCCCCh
Confidence 999999999999998863
No 43
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.88 E-value=1.5e-22 Score=185.80 Aligned_cols=161 Identities=11% Similarity=-0.002 Sum_probs=140.2
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC---CCCCCCCCCCC
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE---ADLPNVRDEEN 104 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g---a~l~~~~d~~G 104 (263)
...|..|+||||.|+..|+.++|+.|++. +..++.. +..|....++|+..|+.+++++|+++| +++ +.+|..|
T Consensus 160 n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~--ga~~~~~-~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~d~~g 235 (373)
T 2fo1_E 160 NAMDCDENTPLMLAVLARRRRLVAYLMKA--GADPTIY-NKSERSALHQAAANRDFGMMVYMLNSTKLKGDI-EELDRNG 235 (373)
T ss_dssp TCCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTT-SCCCTTS
T ss_pred cCCCCCCCCHHHHHHHcChHHHHHHHHHC--CCCCccc-CCCCCCHHHHHHHCCCHHHHHHHHhcCccccCh-hhcCCCC
Confidence 35678899999999999999999999997 3444443 556778889999999999999999998 784 9999999
Q ss_pred CcHHHHHHHcC---CHHHHHHHHhCCCCC-----------------------CCCCHHHHHHHHHhCCCccccccCCCch
Q 037827 105 LLPIHRAAKQG---QRNVVCYLLEKTRAP-----------------------LDGSDDVAYGLLRKHPKLAWAEIAGTGK 158 (263)
Q Consensus 105 ~TPLh~Aa~~g---~~evv~~Ll~~~a~p-----------------------~~~~~~va~~Ll~~~~~~~~~~D~~G~T 158 (263)
+||||+|+..| +.+++++|+++|+++ ..++.+++..|+..++..++.+|.+|.|
T Consensus 236 ~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~T 315 (373)
T 2fo1_E 236 MTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKT 315 (373)
T ss_dssp CCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCC
T ss_pred CCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCC
Confidence 99999999998 899999999988641 6788999999999887788999999999
Q ss_pred HHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCC
Q 037827 159 ILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHA 199 (263)
Q Consensus 159 PLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~ 199 (263)
|||+|+++ ++.++++.|+..|++++..+..+.++
T Consensus 316 pL~~A~~~-------g~~~iv~~Ll~~gad~~~~d~~g~t~ 349 (373)
T 2fo1_E 316 PIMLAAQE-------GRIEVVMYLIQQGASVEAVDATDHTA 349 (373)
T ss_dssp HHHHHHHH-------TCHHHHHHHHHTTCCSSCCCSSSCCH
T ss_pred HHHHHHHc-------CCHHHHHHHHHcCCCccCCCCCCCCH
Confidence 99999997 78899999999999998886544433
No 44
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=99.88 E-value=1.2e-22 Score=175.84 Aligned_cols=155 Identities=14% Similarity=0.010 Sum_probs=135.2
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC-CCCCCCCCCCCcHH
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEA-DLPNVRDEENLLPI 108 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga-~l~~~~d~~G~TPL 108 (263)
.+..|+||||.|+..|+.++|+.|++. +..++.. +..|....++|+..|+.+++++|+++|+ + ++.+|..|+|||
T Consensus 53 ~d~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~~g~t~L 128 (253)
T 1yyh_A 53 TDRTGETALHLAARYSRSDAAKRLLEA--SADANIQ-DNMGRTPLHAAVSADAQGVFQILIRNRATD-LDARMHDGTTPL 128 (253)
T ss_dssp CCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHSTTSC-TTCCCTTCCCHH
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-ccccCCCCCcHH
Confidence 477899999999999999999999997 3444443 5567888899999999999999999998 6 599999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG 173 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~ 173 (263)
|+|+..|+.+++++|++.|+++ ..++.+++..|++.+ ..++.+|.+|.||||+|+++
T Consensus 129 ~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~tpL~~A~~~------- 200 (253)
T 1yyh_A 129 ILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNG-ANKDMQNNREETPLFLAARE------- 200 (253)
T ss_dssp HHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH-------
T ss_pred HHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHC-------
Confidence 9999999999999999999862 567889999999874 55788999999999999987
Q ss_pred cchHHHHHHcccCCCCCCCCCCC
Q 037827 174 IRLGYWKGLLYQWIPVQEEYNPH 196 (263)
Q Consensus 174 ~~~~~~~~li~~~~~v~~~~~~~ 196 (263)
++.++++.|+..|++++..+..+
T Consensus 201 ~~~~~v~~Ll~~ga~~~~~d~~g 223 (253)
T 1yyh_A 201 GSYETAKVLLDHFANRDITDHMD 223 (253)
T ss_dssp TCHHHHHHHHHTTCCTTCCCTTC
T ss_pred CCHHHHHHHHHcCCCccccccCC
Confidence 77899999999999988775443
No 45
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.88 E-value=8.1e-22 Score=167.72 Aligned_cols=164 Identities=15% Similarity=0.076 Sum_probs=139.6
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcC-CCCCCCCCCCCCcH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYE-ADLPNVRDEENLLP 107 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~g-a~l~~~~d~~G~TP 107 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++| .+ ++.+|..|+||
T Consensus 39 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~~g~t~ 114 (237)
T 3b7b_A 39 TCSEDQRTPLMEAAENNHLEAVKYLIKA--GALVDPK-DAEGSTCLHLAAKKGHYEVVQYLLSNGQMD-VNCQDDGGWTP 114 (237)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHHHHTT--TCCCCCC-CTTSCCHHHHHHHTTCHHHHHHHHTTTCCC-TTCCCTTSCCH
T ss_pred ccCCCCCCHHHHHHHhCCHHHHHHHHhC--CCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-cccCCCCCCCH
Confidence 4567899999999999999999999987 3444333 555678888999999999999999999 67 59999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS 172 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s 172 (263)
||+|+..|+.+++++|+++|+++ ..+..+++..|+..+ ..++.+|..|.||||+|+++
T Consensus 115 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~g~t~L~~A~~~------ 187 (237)
T 3b7b_A 115 MIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAK-CDLHAVNIHGDSPLHIAARE------ 187 (237)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTT-CCTTCCCTTCCCHHHHHHHT------
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHh------
Confidence 99999999999999999999862 457888888888875 45688899999999999997
Q ss_pred CcchHHHHHHcccCCCCCCCCCCCCCCCCCCC
Q 037827 173 GIRLGYWKGLLYQWIPVQEEYNPHAHAHSENV 204 (263)
Q Consensus 173 ~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~ 204 (263)
++.++++.|+..|++++..+..+.++.+.++
T Consensus 188 -~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~ 218 (237)
T 3b7b_A 188 -NRYDCVVLFLSRDSDVTLKNKEGETPLQCAS 218 (237)
T ss_dssp -TCHHHHHHHHTTTCCTTCCCTTSCCHHHHSC
T ss_pred -CCHhHHHHHHHcCCCCCccCCCCCCHHHHHH
Confidence 6789999999999999988766655555443
No 46
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.88 E-value=2.6e-22 Score=166.44 Aligned_cols=147 Identities=13% Similarity=0.004 Sum_probs=120.7
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP 107 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP 107 (263)
...|..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||
T Consensus 29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 104 (192)
T 2rfm_A 29 NYRDSYNRTPLMVACMLGMENAIDKLVEN--FDKLEDK-DIEGSTALIWAVKNNRLGIAEKLLSKGSNV-NTKDFSGKTP 104 (192)
T ss_dssp TCCCTTCCCHHHHHHHHTCGGGHHHHHHH--HCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHTCCT-TCCCTTSCCH
T ss_pred hCcCCCCCCHHHHHHHcCCHHHHHHHHHh--ccccccc-cccCccHHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCcH
Confidence 34688899999999999999999999987 3334333 556788889999999999999999999995 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFAS 172 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s 172 (263)
||+|+..|+.+++++|+++++++ ..++.+++..|++. +..++.+|.+|.||||+|+..
T Consensus 105 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~t~l~~A~~~------ 177 (192)
T 2rfm_A 105 LMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLEL-GADISARDLTGLTAEASARIF------ 177 (192)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHT-TCCTTCBCTTSCBHHHHHHHT------
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHC-CCCCCCcCCCCCCHHHHHHHh------
Confidence 99999999999999999888762 45667777777766 344677778888888888776
Q ss_pred CcchHHHHHHcccC
Q 037827 173 GIRLGYWKGLLYQW 186 (263)
Q Consensus 173 ~~~~~~~~~li~~~ 186 (263)
++.++++.|+..+
T Consensus 178 -~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 178 -GRQEVIKIFTEVR 190 (192)
T ss_dssp -TCHHHHHHHHHHH
T ss_pred -CcHHHHHHHHhcc
Confidence 5667777776543
No 47
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.88 E-value=2.3e-22 Score=162.93 Aligned_cols=160 Identities=14% Similarity=0.041 Sum_probs=122.6
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827 33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA 112 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa 112 (263)
.|.||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~ 77 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQ--ENVINHT-DEEGFTPLMWAAAHGQIAVVEFLLQNGADP-QLLGKGRESALSLAC 77 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHH--SSCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHc--CCCcCCC-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCcCCCCCcHHHHHH
Confidence 478999999999999999999987 3445444 556788889999999999999999999995 999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCC
Q 037827 113 KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEE 192 (263)
Q Consensus 113 ~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~ 192 (263)
..|+.+++++|+++++ .++.+|.+|.||||+|+.. ++.++++.|+..|++++..
T Consensus 78 ~~~~~~~v~~Ll~~g~-------------------~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~ 131 (167)
T 3v31_A 78 SKGYTDIVKMLLDCGV-------------------DVNEYDWNGGTPLLYAVHG-------NHVKCVKMLLESGADPTIE 131 (167)
T ss_dssp HHTCHHHHHHHHHHTC-------------------CTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCC
T ss_pred HcCCHHHHHHHHHCCC-------------------CCCcCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCc
Confidence 9999999999975433 3456677888888888876 5678888888887777666
Q ss_pred CCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc
Q 037827 193 YNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF 235 (263)
Q Consensus 193 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (263)
+..+.++.+.++ .....++..+|+.+++++
T Consensus 132 ~~~g~t~l~~A~-------------~~~~~~~~~~L~~~~~~~ 161 (167)
T 3v31_A 132 TDSGYNSMDLAV-------------ALGYRSVQQVIESHLLKL 161 (167)
T ss_dssp CTTSCCHHHHHH-------------HHTCHHHHHHHHHHHHHH
T ss_pred CCCCCCHHHHHH-------------HcCcHHHHHHHHHHHHHH
Confidence 543333322221 112255666666666665
No 48
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.88 E-value=1.1e-22 Score=175.33 Aligned_cols=172 Identities=12% Similarity=0.000 Sum_probs=106.0
Q ss_pred ccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHH
Q 037827 32 IANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRA 111 (263)
Q Consensus 32 ~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~A 111 (263)
..|.||||.|++.|+.+.++.||++ +..++. +..+....++||..|+.+++++|++.|+++ +.+|..|+||||+|
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~--g~~~~~--~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~t~L~~A 77 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAH--GMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEVDDP-SLPNDEGITALHNA 77 (239)
T ss_dssp --------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSC-CCCCTTSCCHHHHH
T ss_pred ccccccCchhhhhhhHHHHHHHhcc--CCCccc--CchhhHHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHH
Confidence 4688999999999999999999987 333322 344567777999999999999999999994 99999999999999
Q ss_pred HHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCC
Q 037827 112 AKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQE 191 (263)
Q Consensus 112 a~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~ 191 (263)
+..|+.++|++|++ . +..++.+|.+|.||||+|+.. ++.++++.|+..|++++.
T Consensus 78 ~~~g~~~~v~~Ll~------------------~-ga~~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~ 131 (239)
T 1ycs_B 78 VCAGHTEIVKFLVQ------------------F-GVNVNAADSDGWTPLHCAASC-------NNVQVCKFLVESGAAVFA 131 (239)
T ss_dssp HHHTCHHHHHHHHH------------------H-TCCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTC
T ss_pred HHcCCHHHHHHHHH------------------c-CCCCCccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCcce
Confidence 99999999999964 3 334677888999999999987 678999999999998888
Q ss_pred CCCCCC-CCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc-------------cccCCcccee
Q 037827 192 EYNPHA-HAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF-------------RVSTTPLTLA 245 (263)
Q Consensus 192 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~ 245 (263)
.+..+. ++.+.+.. ......++..+|+..+++. ..++||+++|
T Consensus 132 ~~~~~~~t~l~~a~~-----------~~~g~~~~~~~Ll~~~a~~~~~~~~~~~al~d~~~~~~~eLa 188 (239)
T 1ycs_B 132 MTYSDMQTAADKCEE-----------MEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDDELP 188 (239)
T ss_dssp CCSSSCCCHHHHCCS-----------SSTTCCCHHHHHHHHHHHTTTTGGGEEEESSCBCCSSTTBCC
T ss_pred ecCCCCcchHHHHHH-----------hhhccHHHHHHHHHhhhcccccccceEEEEeccCCCCCCccc
Confidence 765443 43332210 1112266677788888776 2467888887
No 49
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.88 E-value=1.7e-21 Score=158.76 Aligned_cols=145 Identities=15% Similarity=0.058 Sum_probs=117.7
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHH
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIH 109 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh 109 (263)
....+.++|+.|+..|+.++|+.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||
T Consensus 10 ~~~~~~~~l~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~ 85 (169)
T 2y1l_E 10 HGSDLGKKLLEAARAGRDDEVRILMAN--GADVNAE-DASGWTPLHLAAFNGHLEIVEVLLKNGADV-NAVDHAGMTPLR 85 (169)
T ss_dssp ---CHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHH
T ss_pred CCCcccchHHHHHHcCCHHHHHHHHHC--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHH
Confidence 345668999999999999999999997 3444443 556678889999999999999999999995 999999999999
Q ss_pred HHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCc
Q 037827 110 RAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGI 174 (263)
Q Consensus 110 ~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~ 174 (263)
+|+..|+.+++++|+++++++ ..++.+++..|++.+ ..++.+|.+|.||||+|+++ +
T Consensus 86 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-~~~~~~~~~g~t~l~~A~~~-------~ 157 (169)
T 2y1l_E 86 LAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG-ADVNAQDKFGKTAFDISIDN-------G 157 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------T
T ss_pred HHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCCCCcCCCCCCHHHHHHHh-------C
Confidence 999999999999999988752 456777777777764 34577788888888888876 5
Q ss_pred chHHHHHHcccC
Q 037827 175 RLGYWKGLLYQW 186 (263)
Q Consensus 175 ~~~~~~~li~~~ 186 (263)
+.++++.|+..|
T Consensus 158 ~~~~~~~L~~~G 169 (169)
T 2y1l_E 158 NEDLAEILQKLN 169 (169)
T ss_dssp CHHHHHHHHTC-
T ss_pred CHHHHHHHHHcC
Confidence 678888777543
No 50
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.87 E-value=7.9e-22 Score=167.50 Aligned_cols=155 Identities=14% Similarity=0.075 Sum_probs=127.5
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccc---cccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCC---
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALAC---IIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDE--- 102 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~---~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~--- 102 (263)
..+..|+||||.|+..|+.++++.|++. .+..... ..+..|....++|+..|+.+++++|+++|+++ +.++.
T Consensus 32 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~-~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~~~ 109 (232)
T 2rfa_A 32 QRGAMGETALHIAALYDNLEAAMVLMEA-APELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASV-SARATGSV 109 (232)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHH-CGGGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCCSGG
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHHc-CchhccccccccCCCCcCHHHHHHHcCCHHHHHHHHhCCCCC-CcccCCcc
Confidence 5678899999999999999999999997 3332211 12345678889999999999999999999995 88766
Q ss_pred ----------CCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHH----HHHHHhCCCcc----
Q 037827 103 ----------ENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVA----YGLLRKHPKLA---- 149 (263)
Q Consensus 103 ----------~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va----~~Ll~~~~~~~---- 149 (263)
.|+||||+|+..|+.++|++|+++|+++ ..++.+++ ..|+..+....
T Consensus 110 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~~~~~~ 189 (232)
T 2rfa_A 110 FHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSL 189 (232)
T ss_dssp GSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTCSCHHHHHHHHHHHHHTTCSCSSCCG
T ss_pred eeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCChHHHHHHHHHHHhcCCchhhhhh
Confidence 7999999999999999999999999872 67788877 67777655432
Q ss_pred -ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCC
Q 037827 150 -WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEE 192 (263)
Q Consensus 150 -~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~ 192 (263)
+.+|.+|.||||+|+++ ++.++++.|+..|......
T Consensus 190 ~~~~~~~g~tpl~~A~~~-------g~~~~v~~Ll~~g~~~~~~ 226 (232)
T 2rfa_A 190 ELVPNNQGLTPFKLAGVE-------GNIVMFQHLMQKRKHIAAA 226 (232)
T ss_dssp GGCCCTTSCCHHHHHHHH-------TCHHHHHHHHHHHHHC---
T ss_pred hccCCCCCCCHHHHHHHc-------CCHHHHHHHHhcCccchhh
Confidence 57899999999999997 7889999999998655444
No 51
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=99.87 E-value=2e-21 Score=163.81 Aligned_cols=152 Identities=16% Similarity=0.074 Sum_probs=131.7
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|+.++++.|++. .+..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 53 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L 129 (223)
T 2f8y_A 53 IQDNMGRTPLHAAVSADAQGVFQILIRN-RATDLDAR-MHDGTTPLILAARLAVEGMLEDLINSHADV-NAVDDLGKSAL 129 (223)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHB-TTSCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHTTCCT-TCBCTTSCBHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCcccC-CCCCCcHHHHHHHhCcHHHHHHHHHcCCCC-cCcCCCCCcHH
Confidence 4677899999999999999999999998 44444443 556678888999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASG 173 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~ 173 (263)
|+|+..|+.+++++|+++++++ ..++.+++..|++.+. .++.+|..|.||||+|+++
T Consensus 130 ~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga-~~~~~~~~g~t~l~~A~~~------- 201 (223)
T 2f8y_A 130 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA-NRDITDHMDRLPRDIAQER------- 201 (223)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHT-------
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC-CCccccccCCCHHHHHHHh-------
Confidence 9999999999999999999862 5678889998988754 5688899999999999997
Q ss_pred cchHHHHHHcccCCCCCC
Q 037827 174 IRLGYWKGLLYQWIPVQE 191 (263)
Q Consensus 174 ~~~~~~~~li~~~~~v~~ 191 (263)
++.++++.|+..|+....
T Consensus 202 ~~~~i~~~L~~~g~~~~~ 219 (223)
T 2f8y_A 202 MHHDIVRLLDEYNLVRSP 219 (223)
T ss_dssp TCHHHHHHHHHTTCSSCC
T ss_pred cchHHHHHHHHcCCCccc
Confidence 778999999999875443
No 52
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.87 E-value=2.4e-22 Score=161.95 Aligned_cols=140 Identities=11% Similarity=-0.023 Sum_probs=107.1
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCc-H
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLL-P 107 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~T-P 107 (263)
..+..+.||||.|+..|+.++|+.|++. +..++.. +..|....++|+ .|+.+++++|+++|+++ +.+|..|+| |
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~-~~~d~~g~ttp 81 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEA--GANPNAP-NSYGRRPIQVMM-MGSARVAELLLLHGAEP-NCADPATLTRP 81 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTT--TCCTTCC-CSSSCCTTTSSC-TTCHHHHHHHHTTTCCC-CCCCTTTCCCH
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHH-cCCHHHHHHHHHcCCCC-CCcCCCCCcHH
Confidence 3467789999999999999999999987 3444444 445556666774 99999999999999995 999999999 9
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
||+|+..|+.++|++|++ . +..++.+|.+|.||||+|+++ ++.++++.|+..|+
T Consensus 82 L~~A~~~~~~~~v~~Ll~------------------~-ga~~~~~d~~g~tpl~~A~~~-------~~~~~v~~Ll~~ga 135 (156)
T 1bi7_B 82 VHDAAREGFLDTLVVLHR------------------A-GARLDVRDAWGRLPVDLAEEL-------GHRDVARYLRAAAG 135 (156)
T ss_dssp HHHHHHHTCHHHHHHHHH------------------H-TCCSSCCCTTCCCHHHHHHHH-------TCHHHHHHHSSCC-
T ss_pred HHHHHHCCCHHHHHHHHH------------------c-CCCCcccCCCCCCHHHHHHHh-------CHHHHHHHHHHcCC
Confidence 999999999999999964 3 334677899999999999987 67899999999999
Q ss_pred CCCCCCCCCCCC
Q 037827 188 PVQEEYNPHAHA 199 (263)
Q Consensus 188 ~v~~~~~~~~~~ 199 (263)
+++..+..+..+
T Consensus 136 ~~~~~~~~g~t~ 147 (156)
T 1bi7_B 136 GTRGSNHARIDA 147 (156)
T ss_dssp ------------
T ss_pred CCCccCcCcCcc
Confidence 999887555433
No 53
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.87 E-value=2e-21 Score=155.50 Aligned_cols=138 Identities=17% Similarity=0.071 Sum_probs=115.8
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q 037827 34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAK 113 (263)
Q Consensus 34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~ 113 (263)
+.+|||.|+..|+.+.++.|++. .+..++.. +..|....++ |..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~~~~~~~~-~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 77 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-ELVHPDAL-NRFGKTALQV-MMFGSTAIALELLKQGASP-NVQDTSGTSPVHDAAR 77 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-TCCCTTCC-CTTSCCHHHH-SCTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-hCcCcccc-CCCCCcHHHH-HHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHH
Confidence 46899999999999999999987 44455444 5566777788 9999999999999999995 9999999999999999
Q ss_pred cCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHH
Q 037827 114 QGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGY 178 (263)
Q Consensus 114 ~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~ 178 (263)
.|+.+++++|+++|+++ ..++.+++..|++. ..++.+|.+|.||||+|++. ++.++
T Consensus 78 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~~~g~t~l~~A~~~-------~~~~~ 148 (156)
T 1bd8_A 78 TGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE--SDLHRRDARGLTPLELALQR-------GAQDL 148 (156)
T ss_dssp TTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT--SCTTCCCTTSCCHHHHHHHS-------CCHHH
T ss_pred cCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc--cCCCCcCCCCCCHHHHHHHc-------CcHHH
Confidence 99999999999988762 45677888888776 45677888899999988887 67788
Q ss_pred HHHHcc
Q 037827 179 WKGLLY 184 (263)
Q Consensus 179 ~~~li~ 184 (263)
++.|+.
T Consensus 149 v~~Ll~ 154 (156)
T 1bd8_A 149 VDILQG 154 (156)
T ss_dssp HHHHHT
T ss_pred HHHHHh
Confidence 888775
No 54
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=99.87 E-value=5.8e-22 Score=163.67 Aligned_cols=138 Identities=21% Similarity=0.141 Sum_probs=115.0
Q ss_pred HHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHH
Q 037827 76 IVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYG 140 (263)
Q Consensus 76 ~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~ 140 (263)
.||..|+.++|+.|+++|+++ +.+|.+|+||||+|+..|+.+++++|+..|+++ ..++.+++..
T Consensus 10 ~Aa~~G~~~~v~~Ll~~Gadv-n~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~TpLh~A~~~g~~~~v~~ 88 (169)
T 4gpm_A 10 EAAENGNKDRVKDLIENGADV-NASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKL 88 (169)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHH
T ss_pred HHHHcCCHHHHHHHHHCCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCCCHHHHHHHcCCHHHHHH
Confidence 799999999999999999995 999999999999999999999999999999872 5788999999
Q ss_pred HHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhcccccccc
Q 037827 141 LLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAF 220 (263)
Q Consensus 141 Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (263)
|++.+ ..++.+|.+|.||||+|++. ++.++++.|+..|++++..+..+.+|.+.++. ..
T Consensus 89 Ll~~g-advn~~d~~G~TpLh~A~~~-------g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~-------------~g 147 (169)
T 4gpm_A 89 LISKG-ADVNAKDSDGRTPLHHAAEN-------GHKEVVKLLISKGADVNTSDSDGRTPLDLARE-------------HG 147 (169)
T ss_dssp HHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-------------TT
T ss_pred HHHCc-CCCCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCccccCCCCCCHHHHHHH-------------cC
Confidence 99875 45789999999999999997 77899999999999998887655544433222 12
Q ss_pred chhhhHHHHhhhccc
Q 037827 221 GFELAYLLLHWFVSF 235 (263)
Q Consensus 221 ~~~~~~~~~~~~~~~ 235 (263)
..++..+|+..||++
T Consensus 148 ~~~iv~~Ll~~GA~i 162 (169)
T 4gpm_A 148 NEEVVKLLEKQGGWL 162 (169)
T ss_dssp CHHHHHHHHTC----
T ss_pred CHHHHHHHHHCCCCc
Confidence 267788899999987
No 55
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.87 E-value=2.9e-22 Score=157.89 Aligned_cols=130 Identities=11% Similarity=-0.031 Sum_probs=112.0
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCC-CCc
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEE-NLL 106 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~-G~T 106 (263)
...+..+.||||.|+..|+.++++.|++. +..++.. +..|....++|+. |+.+++++|+++|+++ +.+|.. |+|
T Consensus 6 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~-~~~~~~~g~t 80 (136)
T 1d9s_A 6 HMLGGSSDAGLATAAARGQVETVRQLLEA--GADPNAL-NRFGRRPIQVMMM-GSAQVAELLLLHGAEP-NCADPATLTR 80 (136)
T ss_dssp SCCCCCCSCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCTTTTTSTT-SCHHHHHHHHHHTCCS-SCCBTTTTBC
T ss_pred cCCCCCCccHHHHHHHcCCHHHHHHHHHc--CCCcCCc-CCCCCCHHHHHHc-CCHHHHHHHHHCCCCC-CCcCCCCCCC
Confidence 35678899999999999999999999987 3444444 5566777789999 9999999999999995 999999 999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827 107 PIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW 186 (263)
Q Consensus 107 PLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~ 186 (263)
|||+|+..|+.+++++|++++ ..++.+|.+|.||||+|+++ ++.++++.|+..|
T Consensus 81 ~L~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~d~~g~tpl~~A~~~-------~~~~~~~~Ll~~G 134 (136)
T 1d9s_A 81 PVHDAAREGFLDTLVVLHRAG-------------------ARLDVCDAWGRLPVDLAEEQ-------GHRDIARYLHAAT 134 (136)
T ss_dssp HHHHHHHHTCHHHHHHHHHTC-------------------CCCCCCSSSSSCHHHHHHHH-------TCHHHHHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHHHHcC-------------------CCCCccCCCCCCHHHHHHHc-------CCHHHHHHHHHcC
Confidence 999999999999999996543 34677899999999999987 6789999999887
Q ss_pred CC
Q 037827 187 IP 188 (263)
Q Consensus 187 ~~ 188 (263)
++
T Consensus 135 ad 136 (136)
T 1d9s_A 135 GD 136 (136)
T ss_dssp CC
T ss_pred CC
Confidence 64
No 56
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.87 E-value=1.7e-21 Score=153.38 Aligned_cols=128 Identities=14% Similarity=0.056 Sum_probs=108.5
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
.....+.||||.|+..|+.++++.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 9 ~~~~~~~t~l~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L 84 (136)
T 2jab_A 9 HHGSDLGKKLLEAARAGQDDEVRILMAN--GADVNAK-DEYGLTPLYLATAHGHLEIVEVLLKNGADV-NAVDAIGFTPL 84 (136)
T ss_dssp ---CHHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred cccccccHHHHHHHHhCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHH
Confidence 4556789999999999999999999997 3444444 556788889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW 186 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~ 186 (263)
|+|+..|+.++|++|+++| ..++.+|.+|.||||+|++. ++.++++.|+..|
T Consensus 85 ~~A~~~~~~~~v~~Ll~~g-------------------~~~~~~~~~g~tpl~~A~~~-------~~~~~~~~Ll~~G 136 (136)
T 2jab_A 85 HLAAFIGHLEIAEVLLKHG-------------------ADVNAQDKFGKTAFDISIGN-------GNEDLAEILQKLN 136 (136)
T ss_dssp HHHHHHTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHC-
T ss_pred HHHHHcCCHHHHHHHHHcC-------------------CCCcCcCCCCCCHHHHHHHC-------CCHHHHHHHHHcC
Confidence 9999999999999996433 34577899999999999997 6789999988654
No 57
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.86 E-value=9.3e-23 Score=178.10 Aligned_cols=198 Identities=12% Similarity=0.066 Sum_probs=123.6
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhcc--CCCcccc---cccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCC----
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSK--TPNALAC---IIVDQSSIFEFIVAST---GKLELISTLIRYEADL---- 96 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~--~~~~~~~---~i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l---- 96 (263)
..+..|+||||.|+..|+.++|+.|++.. .+..++. ..+..|....++||.. |+.++|++|+++|++.
T Consensus 8 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~ 87 (273)
T 2pnn_A 8 PPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLK 87 (273)
T ss_dssp ---CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHH
T ss_pred CCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchh
Confidence 45677788888888888888777777620 1222211 1244556777777765 8888888888876541
Q ss_pred --CC----CCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-----------------------------CCCCHHHHHHH
Q 037827 97 --PN----VRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP-----------------------------LDGSDDVAYGL 141 (263)
Q Consensus 97 --~~----~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p-----------------------------~~~~~~va~~L 141 (263)
++ .+|..|+||||+|+..|+.++|++|+++|+++ ..++.+++..|
T Consensus 88 ~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~L 167 (273)
T 2pnn_A 88 QFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFL 167 (273)
T ss_dssp HHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHH
T ss_pred HHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHH
Confidence 02 25667888888888888888888888877652 23456777777
Q ss_pred HHh--CCCccccccCCCchHHHHHhcCCCCCcCC--cchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccc
Q 037827 142 LRK--HPKLAWAEIAGTGKILELLSKRPKAFASG--IRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSH 217 (263)
Q Consensus 142 l~~--~~~~~~~~D~~G~TPLHlAA~~~~~f~s~--~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (263)
++. .+..++.+|.+|.||||+|++.++..... ...++++.|+..|++++...... +-.+..+.+.+.+
T Consensus 168 l~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~--------~~~d~~g~TpL~~ 239 (273)
T 2pnn_A 168 LQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLE--------EITNRKGLTPLAL 239 (273)
T ss_dssp HHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGG--------GCCCTTSCCHHHH
T ss_pred HhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccc--------cccCCCCCCHHHH
Confidence 773 45667889999999999999864210000 01689999999999887521100 0001111222223
Q ss_pred ccc--chhhhHHHHhhhcc
Q 037827 218 SAF--GFELAYLLLHWFVS 234 (263)
Q Consensus 218 ~~~--~~~~~~~~~~~~~~ 234 (263)
++. ..++..+|+..||.
T Consensus 240 A~~~g~~~iv~~Ll~~ga~ 258 (273)
T 2pnn_A 240 AASSGKIGVLAYILQREIH 258 (273)
T ss_dssp HHHTTCHHHHHHHHHHHTC
T ss_pred HHHhChHHHHHHHHHCCCC
Confidence 333 36677788888884
No 58
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.86 E-value=1.8e-22 Score=174.62 Aligned_cols=198 Identities=14% Similarity=0.026 Sum_probs=138.4
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHh----ccCCCcccccc---cCCcCHHHHHHH---hCCcHHHHHHHHHcCCCC----
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIM----SKTPNALACII---VDQSSIFEFIVA---STGKLELISTLIRYEADL---- 96 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~----~~~~~~~~~~i---~~~g~iv~~~AA---~~G~~eiv~~Ll~~ga~l---- 96 (263)
+..++++||.|++.|+.+.++.|++ . +..++... +..|....++|+ ..|+.+++++|++.|++.
T Consensus 2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~--~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~ 79 (260)
T 3jxi_A 2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTH--KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMR 79 (260)
T ss_dssp CCCCHHHHHHHHHHTCGGGGTTHHHHHHHH--TCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHH
T ss_pred ccchHHHHHHHHHhCCHHHHHHHHHHHHhc--CCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchH
Confidence 4568999999999999997666666 4 33333321 245788888998 779999999999988531
Q ss_pred ------CCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCC
Q 037827 97 ------PNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAF 170 (263)
Q Consensus 97 ------~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f 170 (263)
.+.+|..|+||||+|+..|+.++|++|+++|+++...... .+. .+......+.+|.||||+|++.
T Consensus 80 ~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~---~~~--~~~~~~~~~~~g~tpL~~A~~~---- 150 (260)
T 3jxi_A 80 EFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARG---RFF--QPKDEGGYFYFGELPLSLAACT---- 150 (260)
T ss_dssp HHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEE---CCC--SSSCCCCSCCSCSSHHHHHHHT----
T ss_pred hhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccc---ccc--CcccccccccCCCCHHHHHHHc----
Confidence 2555669999999999999999999998877652000000 000 0011122336899999999997
Q ss_pred cCCcchHHHHHHcc---cCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhccc-----------c
Q 037827 171 ASGIRLGYWKGLLY---QWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVSF-----------R 236 (263)
Q Consensus 171 ~s~~~~~~~~~li~---~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~ 236 (263)
++.++++.|+. .|++++..+..+.++.|.++.-... ......+..++..+|+..|+++ +
T Consensus 151 ---g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~~~~----~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~ 223 (260)
T 3jxi_A 151 ---NQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADN----TRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNN 223 (260)
T ss_dssp ---TCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCS----SHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCT
T ss_pred ---CCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHhccC----chhHHHHHHHHHHHHHHhCcccccccchhhcccC
Confidence 67899999999 8999998887666666554410000 0000001146777899998875 6
Q ss_pred ccCCccceec
Q 037827 237 VSTTPLTLAT 246 (263)
Q Consensus 237 ~~~~~~~~~~ 246 (263)
.+.|||++|.
T Consensus 224 ~g~tpL~~A~ 233 (260)
T 3jxi_A 224 DGLSPLMMAA 233 (260)
T ss_dssp TSCCHHHHHH
T ss_pred CCCCHHHHHH
Confidence 8999999995
No 59
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.86 E-value=1.1e-21 Score=165.83 Aligned_cols=182 Identities=18% Similarity=0.057 Sum_probs=139.3
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|.||||.|+..|+.++++.|++. .+ .+....+..+....++|+..|+.+++++|++.|+++ +.+|..|+|||
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~-~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~l 113 (240)
T 3eu9_A 37 QPDKENVTLLHWAAINNRIDLVKYYISK-GA-IVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADP-SLIDGEGCSCI 113 (240)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT-TC-CTTCCBTTTTBCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHhCCHHHHHHHHHc-CC-cchhhcCCcCCChhHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHH
Confidence 4567899999999999999999999998 33 333332444677888999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccC-CCchHHHHHhcCCCCCc
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIA-GTGKILELLSKRPKAFA 171 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~-~G~TPLHlAA~~~~~f~ 171 (263)
|+|+..|+.+++++|+++++++ .....+++..|+.. +..++..+. .|.||||+|+++
T Consensus 114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~-~~~~~~~~~~~g~t~L~~A~~~----- 187 (240)
T 3eu9_A 114 HLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTF-NVSVNLGDKYHKNTALHWAVLA----- 187 (240)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHT-TCCTTCCCTTTCCCHHHHHHHH-----
T ss_pred HHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhc-CCCcchhhccCCCcHHHHHHHc-----
Confidence 9999999999999999999862 12224455555555 444566675 999999999997
Q ss_pred CCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhcc
Q 037827 172 SGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFVS 234 (263)
Q Consensus 172 s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (263)
++.++++.|+..|++++..+..+.++.+.++. ....++..+|+..+++
T Consensus 188 --~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~-------------~~~~~~v~~L~~~~~~ 235 (240)
T 3eu9_A 188 --GNTTVISLLLEAGANVDAQNIKGESALDLAKQ-------------RKNVWMINHLQEARQA 235 (240)
T ss_dssp --TCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHH-------------TTCHHHHHHHHHHC--
T ss_pred --CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH-------------cCcHHHHHHHHHhhhc
Confidence 67899999999999988776544433322222 2225566666666654
No 60
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.86 E-value=1.5e-21 Score=171.66 Aligned_cols=166 Identities=11% Similarity=0.044 Sum_probs=141.6
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|+.++|+.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~-~~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~l 143 (299)
T 1s70_B 68 YANVDGLTALHQACIDDNVDMVKFLVEN--GANINQP-DNEGWIPLHAAASCGYLDIAEYLISQGAHV-GAVNSEGDTPL 143 (299)
T ss_dssp CBCTTCCBHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHC--CCCCCCC-CCCCCcHHHHHHHcCCHHHHHHHHhCCCCC-CCcCCCCCCHH
Confidence 4577899999999999999999999997 3445444 556788889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCC-C------------------------------------CC-----CCCCHHHHHHHHHhCC
Q 037827 109 HRAAKQGQRNVVCYLLEKT-R------------------------------------AP-----LDGSDDVAYGLLRKHP 146 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~-a------------------------------------~p-----~~~~~~va~~Ll~~~~ 146 (263)
|+|+..|+.+++++|+... . .| ..++.+++..|+..+
T Consensus 144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g- 222 (299)
T 1s70_B 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR- 222 (299)
T ss_dssp HHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTT-
T ss_pred HHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcC-
Confidence 9999999999999877531 1 11 567889999998764
Q ss_pred CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCCh
Q 037827 147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDG 206 (263)
Q Consensus 147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~ 206 (263)
..++.+|.+|.||||+|+++ ++.++++.|+..|++++..+..+.++.+.++.+
T Consensus 223 ~d~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~~~ 275 (299)
T 1s70_B 223 YDVNIKDYDGWTPLHAAAHW-------GKEEACRILVENLCDMEAVNKVGQTAFDVADED 275 (299)
T ss_dssp CCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCTTTSCCSG
T ss_pred CCCCCcCCCCCcHHHHHHhc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHH
Confidence 55788999999999999998 778999999999999999988787777777553
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.86 E-value=1.9e-22 Score=174.28 Aligned_cols=171 Identities=17% Similarity=0.088 Sum_probs=129.6
Q ss_pred hcccChHHHHHHHHc---CCHHHHHHHHhcc-CCCccc----cc---ccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCC
Q 037827 30 KDIANYKQVTRYLLE---DDWKGLEDYIMSK-TPNALA----CI---IVDQSSIFEFIVASTGKLELISTLIRYEADLPN 98 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~---G~~e~v~~Ll~~~-~~~~~~----~~---i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~ 98 (263)
.+..|+||||.|+.. |+.++++.|++.+ ++.... .. .+..|....++||..|+.+++++|+++|+++ +
T Consensus 39 ~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~ 117 (256)
T 2etb_A 39 EGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV-H 117 (256)
T ss_dssp BTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-T
T ss_pred CCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCC-C
Confidence 688999999999999 9999999999862 111111 10 1234678889999999999999999999995 9
Q ss_pred CCCCC-------------CCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827 99 VRDEE-------------NLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK 165 (263)
Q Consensus 99 ~~d~~-------------G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~ 165 (263)
.+|.. |+||||+|+..|+.++|++|++.+ ..+..++.+|.+|.||||+|++
T Consensus 118 ~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~----------------~~ga~~n~~d~~g~TpLh~A~~ 181 (256)
T 2etb_A 118 LRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENP----------------HQPASLEATDSLGNTVLHALVM 181 (256)
T ss_dssp CCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCS----------------SCCCCTTCCCTTSCCHHHHHHH
T ss_pred cccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcc----------------ccCCCcCccCCCCCCHHHHHHH
Confidence 99987 999999999999999999996410 0344577889999999999998
Q ss_pred CCCCCcCCcchH-------HHHHHcccCCCC-------CCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhh
Q 037827 166 RPKAFASGIRLG-------YWKGLLYQWIPV-------QEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHW 231 (263)
Q Consensus 166 ~~~~f~s~~~~~-------~~~~li~~~~~v-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (263)
.+. ++.+ +++.|+..|+++ +..+..+.++.+.+ ......++..+|+.+
T Consensus 182 ~~~-----~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A-------------~~~g~~~~v~~Ll~~ 243 (256)
T 2etb_A 182 IAD-----NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLA-------------AKEGKIEIFRHILQR 243 (256)
T ss_dssp HCC-----SCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHH-------------HHTTCHHHHHHHHHH
T ss_pred ccc-----CCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHH-------------HHhCCHHHHHHHHhC
Confidence 321 4556 999999999988 44443333333222 222236778888888
Q ss_pred hccc
Q 037827 232 FVSF 235 (263)
Q Consensus 232 ~~~~ 235 (263)
|++.
T Consensus 244 g~~~ 247 (256)
T 2etb_A 244 EFSG 247 (256)
T ss_dssp HHHH
T ss_pred CCCC
Confidence 8887
No 62
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.86 E-value=2.3e-21 Score=165.48 Aligned_cols=151 Identities=10% Similarity=-0.073 Sum_probs=129.8
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCC-----CCCCCCCC
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEAD-----LPNVRDEE 103 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~-----l~~~~d~~ 103 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|++ .++..|..
T Consensus 40 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~ 116 (236)
T 1ikn_D 40 FQNNLQQTPLHLAVITNQPEIAEALLGA--GCDPELR-DFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYN 116 (236)
T ss_dssp CCCTTCCCHHHHHHHTTCHHHHHCCCSC--CCCSCCC-CTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSSCGGGCCCTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHhcccchhHHHHhhccCCC
Confidence 4677899999999999999999999987 3444443 55678888999999999999999999875 13778899
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhCCCCC----------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCC
Q 037827 104 NLLPIHRAAKQGQRNVVCYLLEKTRAP----------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRP 167 (263)
Q Consensus 104 G~TPLh~Aa~~g~~evv~~Ll~~~a~p----------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~ 167 (263)
|+||||+|+..|+.++|++|+++|+++ ..++.+++..|++. +..++.+|..|.||||+|+.+
T Consensus 117 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~-ga~~~~~~~~g~tpl~~A~~~- 194 (236)
T 1ikn_D 117 GHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKC-GADVNRVTYQGYSPYQLTWGR- 194 (236)
T ss_dssp CCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTT-TCCSCCCCTTCCCGGGGCTTS-
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHc-CCCCCcccCCCCCHHHHHHcc-
Confidence 999999999999999999999999862 45778888888887 555788999999999999987
Q ss_pred CCCcCCcchHHHHHHcccCCCCC
Q 037827 168 KAFASGIRLGYWKGLLYQWIPVQ 190 (263)
Q Consensus 168 ~~f~s~~~~~~~~~li~~~~~v~ 190 (263)
++.++++.|+..|++..
T Consensus 195 ------~~~~~~~~Ll~~ga~~~ 211 (236)
T 1ikn_D 195 ------PSTRIQQQLGQLTLENL 211 (236)
T ss_dssp ------SCHHHHHHHHTTSCGGG
T ss_pred ------CchHHHHHHHHcchhhh
Confidence 77899999999998665
No 63
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.86 E-value=6.4e-21 Score=152.63 Aligned_cols=136 Identities=13% Similarity=0.063 Sum_probs=116.2
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHH
Q 037827 34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAK 113 (263)
Q Consensus 34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~ 113 (263)
..++|+.|+..|+.+.++.|++. .. ... .+..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+.
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~-g~-~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~ 76 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMAN-GA-PFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR-DARTKVDRTPLHMAAS 76 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHH-TC-CCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCT-TCCCTTCCCHHHHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHc-CC-CCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHHH
Confidence 46899999999999999999987 33 222 2455678888999999999999999999995 9999999999999999
Q ss_pred cCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHH
Q 037827 114 QGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGY 178 (263)
Q Consensus 114 ~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~ 178 (263)
.|+.++|++|+++|+++ ..++.+++..|++.+ ..++.+|.+|.||||+|+++ ++.++
T Consensus 77 ~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~-------~~~~i 148 (153)
T 1awc_B 77 EGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG-ADVHTQSKFCKTAFDISIDN-------GNEDL 148 (153)
T ss_dssp HTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHH
T ss_pred cChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcC-CCccccCCCCCCHHHHHHHc-------CCHHH
Confidence 99999999999998862 567889999998874 55788999999999999997 67788
Q ss_pred HHHH
Q 037827 179 WKGL 182 (263)
Q Consensus 179 ~~~l 182 (263)
++.|
T Consensus 149 ~~~L 152 (153)
T 1awc_B 149 AEIL 152 (153)
T ss_dssp HHHH
T ss_pred HHHh
Confidence 8765
No 64
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.85 E-value=6.1e-21 Score=146.14 Aligned_cols=126 Identities=21% Similarity=0.163 Sum_probs=109.2
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827 33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA 112 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa 112 (263)
+|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~l~~A~ 76 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA 76 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHH--TCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHc--CCCCCCc-CCCCCcHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCcHHHHHH
Confidence 588999999999999999999997 2333333 556677888999999999999999999995 999999999999999
Q ss_pred HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827 113 KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP 188 (263)
Q Consensus 113 ~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~ 188 (263)
..|+.+++++|++++ ..++.+|.+|.||||+|++. ++.++++.|+..|++
T Consensus 77 ~~~~~~~~~~Ll~~g-------------------~~~~~~~~~g~t~l~~A~~~-------~~~~~~~~Ll~~Gad 126 (126)
T 1n0r_A 77 RNGHLEVVKLLLEAG-------------------ADVNAKDKNGRTPLHLAARN-------GHLEVVKLLLEAGAY 126 (126)
T ss_dssp HTTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHTCC
T ss_pred HcChHHHHHHHHHcC-------------------CCCcccCCCCCCHHHHHHHc-------CcHHHHHHHHHcCCC
Confidence 999999999996543 33567889999999999997 778999999988864
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.85 E-value=6.6e-21 Score=158.11 Aligned_cols=146 Identities=13% Similarity=0.021 Sum_probs=123.3
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHH-HcCCCCCCCCCCCCCcH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLI-RYEADLPNVRDEENLLP 107 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll-~~ga~l~~~~d~~G~TP 107 (263)
..+.+|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+ ..+++ ++.+|..|+||
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~-~~~~~~~g~t~ 109 (201)
T 3hra_A 34 EVDTEGNTPLNIAVHNNDIEIAKALIDR--GADINLQ-NSISDSPYLYAGAQGRTEILAYMLKHATPD-LNKHNRYGGNA 109 (201)
T ss_dssp CCCTTSCCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHSCCC-TTCCCTTSCCS
T ss_pred CCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhccCcc-cccccCCCCcH
Confidence 4567899999999999999999999997 3444443 556678888999999999999999 55667 59999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCC-CCC---------------CCCC-----HHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827 108 IHRAAKQGQRNVVCYLLEKT-RAP---------------LDGS-----DDVAYGLLRKHPKLAWAEIAGTGKILELLSKR 166 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~-a~p---------------~~~~-----~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~ 166 (263)
||+|+..|+.+++++|++++ +++ ..+. .+++..|++.+ ..++.+|.+|.||||+|+++
T Consensus 110 L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~g-a~~~~~~~~g~t~l~~A~~~ 188 (201)
T 3hra_A 110 LIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENG-ADQSIKDNSGRTAMDYANQK 188 (201)
T ss_dssp HHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTT-CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCC-CCCCccCCCCCCHHHHHHHc
Confidence 99999999999999999998 441 2233 78888888874 55788999999999999997
Q ss_pred CCCCcCCcchHHHHHHcccC
Q 037827 167 PKAFASGIRLGYWKGLLYQW 186 (263)
Q Consensus 167 ~~~f~s~~~~~~~~~li~~~ 186 (263)
++.++++.|+..|
T Consensus 189 -------~~~~~~~~Ll~~G 201 (201)
T 3hra_A 189 -------GYTEISKILAQYN 201 (201)
T ss_dssp -------TCHHHHHHHHTCC
T ss_pred -------CCHhHHHHHHhcC
Confidence 7789999998765
No 66
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.85 E-value=2.9e-21 Score=157.12 Aligned_cols=136 Identities=10% Similarity=0.013 Sum_probs=116.5
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP 107 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP 107 (263)
...+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||
T Consensus 30 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~ 105 (172)
T 3v30_A 30 NKPDERGFTPLIWASAFGEIETVRFLLEW--GADPHIL-AKERESALSLASTGGYTDIVGLLLERDVDI-NIYDWNGGTP 105 (172)
T ss_dssp GCCCTTSCCHHHHHHHTTCHHHHHHHHHH--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCH
T ss_pred cCCCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCchhh-cccCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 34577899999999999999999999987 3444433 556678888999999999999999999995 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
||+|+..|+.++|++|+++| ..++.+|.+|.||||+|++. ++.++++.|+..++
T Consensus 106 L~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~~~~g~t~l~~A~~~-------~~~~~~~~L~~~~~ 159 (172)
T 3v30_A 106 LLYAVRGNHVKCVEALLARG-------------------ADLTTEADSGYTPMDLAVAL-------GYRKVQQVIENHIL 159 (172)
T ss_dssp HHHHHHTTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcC-------------------CCccccCCCCCCHHHHHHHh-------CcHHHHHHHHHHHH
Confidence 99999999999999996433 34577899999999999997 67899999999987
Q ss_pred CCCCCC
Q 037827 188 PVQEEY 193 (263)
Q Consensus 188 ~v~~~~ 193 (263)
++...+
T Consensus 160 ~~~~~~ 165 (172)
T 3v30_A 160 KLFQSN 165 (172)
T ss_dssp HHSCC-
T ss_pred HHhccc
Confidence 766554
No 67
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.85 E-value=1.8e-21 Score=169.91 Aligned_cols=156 Identities=14% Similarity=0.081 Sum_probs=122.0
Q ss_pred hhcccChHHHHHHHHc---CCHHHHHHHHhcc-CCCc----cccc---ccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCC
Q 037827 29 IKDIANYKQVTRYLLE---DDWKGLEDYIMSK-TPNA----LACI---IVDQSSIFEFIVASTGKLELISTLIRYEADLP 97 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~---G~~e~v~~Ll~~~-~~~~----~~~~---i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~ 97 (263)
..+..|+||||.|+.. |+.++|+.|++.+ ++.. ++.. .+..|....++||..|+.++|++|+++|+++
T Consensus 49 ~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~- 127 (273)
T 2pnn_A 49 KDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADV- 127 (273)
T ss_dssp SCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCT-
T ss_pred ccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCc-
Confidence 3477899999999986 9999999999872 1111 2221 1335688889999999999999999999995
Q ss_pred CCCCC--------------CCCcHHHHHHHcCCHHHHHHHHh---CCCCC---------------CCCC---------HH
Q 037827 98 NVRDE--------------ENLLPIHRAAKQGQRNVVCYLLE---KTRAP---------------LDGS---------DD 136 (263)
Q Consensus 98 ~~~d~--------------~G~TPLh~Aa~~g~~evv~~Ll~---~~a~p---------------~~~~---------~~ 136 (263)
+.+|. .|+||||+|+..|+.++|++|++ .|+++ ..+. .+
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~ 207 (273)
T 2pnn_A 128 QAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTS 207 (273)
T ss_dssp TCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHH
T ss_pred CccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHH
Confidence 99987 79999999999999999999999 78762 2223 56
Q ss_pred HHHHHHHhCCCcc------ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC-CCCCC
Q 037827 137 VAYGLLRKHPKLA------WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI-PVQEE 192 (263)
Q Consensus 137 va~~Ll~~~~~~~------~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~-~v~~~ 192 (263)
++..|+..+.+.. +.+|.+|.||||+|+++ ++.++++.|+..|+ +....
T Consensus 208 ~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~-------g~~~iv~~Ll~~ga~dp~~~ 263 (273)
T 2pnn_A 208 MYNEILILGAKLHPTLKLEEITNRKGLTPLALAASS-------GKIGVLAYILQREIHEPECR 263 (273)
T ss_dssp HHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHHTC-----
T ss_pred HHHHHHHhhhhcccccccccccCCCCCCHHHHHHHh-------ChHHHHHHHHHCCCCCchhh
Confidence 7777877743321 35899999999999998 78899999999998 44443
No 68
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.84 E-value=4.5e-21 Score=169.12 Aligned_cols=149 Identities=13% Similarity=-0.002 Sum_probs=121.4
Q ss_pred hhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHH-----hCCcHHHHHHHHHcCCCCCCCCCC
Q 037827 28 IIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVA-----STGKLELISTLIRYEADLPNVRDE 102 (263)
Q Consensus 28 ~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA-----~~G~~eiv~~Ll~~ga~l~~~~d~ 102 (263)
...|.+|+||||+|+..|+.++|+.|++. ....++.. +..|....++|+ ..|+.+++++|++.|.+. +..|.
T Consensus 105 n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~-g~~~~~~~-~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~-~~~~~ 181 (276)
T 4hbd_A 105 NIADSNGNTALHYSVSHANFPVVQQLLDS-GVCKVDKQ-NRAGYSPIMLTALATLKTQDDIETVLQLFRLGNIN-AKASQ 181 (276)
T ss_dssp TCCCTTSCCHHHHHHHTTCHHHHHHHHHT-SCCCTTCC-CTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTT-CCCTT
T ss_pred cCCCCCCCCHHHHHHHCCCHHHHHHHHHC-CCCcCCCC-CCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCc-cccCC
Confidence 35688899999999999999999999998 33345444 556677778888 668999999999999884 88999
Q ss_pred CCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCC
Q 037827 103 ENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRP 167 (263)
Q Consensus 103 ~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~ 167 (263)
.|+||||+|+..|+.++|++|++.|+++ ..++.+++..|+...+..++.+|.+|.||||+|+++
T Consensus 182 ~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~- 260 (276)
T 4hbd_A 182 AGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDA- 260 (276)
T ss_dssp TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHH-
T ss_pred CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHc-
Confidence 9999999999999999999999888862 456677777777755666777888888888888886
Q ss_pred CCCcCCcchHHHHHHcccC
Q 037827 168 KAFASGIRLGYWKGLLYQW 186 (263)
Q Consensus 168 ~~f~s~~~~~~~~~li~~~ 186 (263)
++.++++.|+...
T Consensus 261 ------g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 261 ------GQSEIASMLYSRM 273 (276)
T ss_dssp ------TCHHHHHHHHHHC
T ss_pred ------CCHHHHHHHHhcc
Confidence 6678888887653
No 69
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.84 E-value=1.2e-21 Score=176.93 Aligned_cols=93 Identities=10% Similarity=0.001 Sum_probs=77.9
Q ss_pred hcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCc---HHHHHHHHHcC-CCCCCCCCCCCC
Q 037827 30 KDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGK---LELISTLIRYE-ADLPNVRDEENL 105 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~---~eiv~~Ll~~g-a~l~~~~d~~G~ 105 (263)
.+..|+||||+|+..|+.++|+.||+. +..++.. +..|.+..++||..|+ .++++.|++.+ ++ ++.+|..|+
T Consensus 127 ~d~~g~TpLh~Aa~~g~~~~v~~Ll~~--Gad~n~~-d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~-~~~~d~~g~ 202 (327)
T 1sw6_A 127 VDEHGNTPLHWLTSIANLELVKHLVKH--GSNRLYG-DNMGESCLVKAVKSVNNYDSGTFEALLDYLYPC-LILEDSMNR 202 (327)
T ss_dssp CSTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTBC-CTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGG-GGEECTTCC
T ss_pred cCCCCCcHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHhcccccHHHHHHHHHhhhcc-ccCCCCCCC
Confidence 678899999999999999999999987 4555544 5667888889999998 78888888876 66 489999999
Q ss_pred cHHHHHHH----cCCHHHHHHHHhC
Q 037827 106 LPIHRAAK----QGQRNVVCYLLEK 126 (263)
Q Consensus 106 TPLh~Aa~----~g~~evv~~Ll~~ 126 (263)
||||+|+. .|+.++|++|++.
T Consensus 203 tpLh~A~~~~~~~g~~~~v~~Ll~~ 227 (327)
T 1sw6_A 203 TILHHIIITSGMTGCSAAAKYYLDI 227 (327)
T ss_dssp CHHHHHHHHHTSTTCHHHHHHHHHH
T ss_pred CHHHHHHHHccccccHHHHHHHHHH
Confidence 99999998 8999999999764
No 70
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.84 E-value=8.7e-21 Score=155.69 Aligned_cols=136 Identities=17% Similarity=0.100 Sum_probs=118.8
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 34 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~t~L 109 (179)
T 3f6q_A 34 QGDDHGFSPLHWACREGRSAVVEMLIMR--GARINVM-NRGDDTPLHLAASHGHRDIVQKLLQYKADI-NAVNEHGNVPL 109 (179)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHH
T ss_pred ccCCCCCCHHHHHHHcCcHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHH
Confidence 4677899999999999999999999987 3444444 556788889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP 188 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~ 188 (263)
|+|+..|+.++|++|+++ +..++.+|.+|.||||+|++. ++..+++.|+..|++
T Consensus 110 ~~A~~~~~~~~v~~Ll~~-------------------ga~~~~~~~~g~tpl~~A~~~-------~~~~~~~~L~~~g~~ 163 (179)
T 3f6q_A 110 HYACFWGQDQVAEDLVAN-------------------GALVSICNKYGEMPVDKAKAP-------LRELLRERAEKMGQN 163 (179)
T ss_dssp HHHHHTTCHHHHHHHHHT-------------------TCCSSBCCTTSCCGGGGSCHH-------HHHHHHHHHHHTTCC
T ss_pred HHHHHcCCHHHHHHHHHC-------------------CCCcchhccCCCCcHHHHHHH-------HHHHHHHHHHHhhcC
Confidence 999999999999999643 334677899999999999876 788999999999999
Q ss_pred CCCCCC
Q 037827 189 VQEEYN 194 (263)
Q Consensus 189 v~~~~~ 194 (263)
++....
T Consensus 164 ~~~~~~ 169 (179)
T 3f6q_A 164 LNRIPY 169 (179)
T ss_dssp CSCBCC
T ss_pred cccCCc
Confidence 987653
No 71
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.83 E-value=6.6e-21 Score=164.73 Aligned_cols=140 Identities=13% Similarity=0.029 Sum_probs=111.5
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHhccCCCccccccc-------------CCcCHHHHHHHhCCcHHHHHHHHH---cCC
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIV-------------DQSSIFEFIVASTGKLELISTLIR---YEA 94 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~-------------~~g~iv~~~AA~~G~~eiv~~Ll~---~ga 94 (263)
|..|+||||.|+..|+.++|+.|++. +..++.... ..|....++||..|+.++|++|++ +|+
T Consensus 90 d~~g~t~L~~A~~~g~~~~v~~Ll~~--ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga 167 (260)
T 3jxi_A 90 YYRGQTALHIAIERRCKHYVELLVEK--GADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQA 167 (260)
T ss_dssp SEESBCHHHHHHHTTCHHHHHHHHHT--TCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCC
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhC--CCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCC
Confidence 44899999999999999999999997 344444321 356888899999999999999999 999
Q ss_pred CCCCCCCCCCCcHHHHHHHcCC---------HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhc
Q 037827 95 DLPNVRDEENLLPIHRAAKQGQ---------RNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSK 165 (263)
Q Consensus 95 ~l~~~~d~~G~TPLh~Aa~~g~---------~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~ 165 (263)
++ +.+|..|+||||+|+..|+ .+++++|+++|++ +.......+.+|.+|.||||+|++
T Consensus 168 ~~-~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~------------~~~~~~~~~~~d~~g~tpL~~A~~ 234 (260)
T 3jxi_A 168 DL-RRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAK------------LFPDTNLEALLNNDGLSPLMMAAK 234 (260)
T ss_dssp CT-TCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHH------------HCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred CC-cccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcc------------cccccchhhcccCCCCCHHHHHHH
Confidence 95 9999999999999999887 5777777654432 101112236789999999999999
Q ss_pred CCCCCcCCcchHHHHHHcccCCCCCCC
Q 037827 166 RPKAFASGIRLGYWKGLLYQWIPVQEE 192 (263)
Q Consensus 166 ~~~~f~s~~~~~~~~~li~~~~~v~~~ 192 (263)
+ ++.++++.|+.+|......
T Consensus 235 ~-------g~~~~v~~Ll~~g~~~~~~ 254 (260)
T 3jxi_A 235 T-------GKIGIFQHIIRREIADAAA 254 (260)
T ss_dssp T-------TCHHHHHHHHHHHHHHHC-
T ss_pred c-------CCHHHHHHHHHhCCCcccc
Confidence 8 7889999999988654433
No 72
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.83 E-value=2.7e-20 Score=150.39 Aligned_cols=128 Identities=15% Similarity=0.028 Sum_probs=108.1
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 37 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 112 (165)
T 3twr_A 37 DIEGRQSTPLHFAAGYNRVSVVEYLLQH--GADVHAK-DKGGLVPLHNACSYGHYEVAELLVKHGAVV-NVADLWKFTPL 112 (165)
T ss_dssp CTTTTCCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCCHH
T ss_pred ccccCCCCHHHHHHHcChHHHHHHHHhc--CCCCCcc-CCCCCCHHHHHHHcCcHHHHHHHHhCCCCC-CCcCCCCCCHH
Confidence 4566789999999999999999999997 3444444 556788889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
|+|+..|+.++|++|+++| ..++.+|.+|.||||+|++ ++.++++.|+..|+
T Consensus 113 ~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~~~~g~t~l~~a~~--------~~~~i~~~L~~~gA 164 (165)
T 3twr_A 113 HEAAAKGKYEICKLLLQHG-------------------ADPTKKNRDGNTPLDLVKD--------GDTDIQDLLRGDAA 164 (165)
T ss_dssp HHHHHTTCHHHHHHHHHTT-------------------CCTTCCCTTSCCTGGGSCT--------TCHHHHHHHHTC--
T ss_pred HHHHHcCCHHHHHHHHHcC-------------------CCCcccCCCCCChhHhHhc--------CChHHHHHHhhccc
Confidence 9999999999999996433 3467789999999999654 46699999987763
No 73
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.83 E-value=6.4e-21 Score=149.88 Aligned_cols=125 Identities=14% Similarity=0.043 Sum_probs=104.8
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L 80 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQN--GSDPNVK-DHAGWTPLHEACNHGHLKVVELLLQHKALV-NTTGYQNDSPL 80 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHT--TCCSCCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCGGGCCHH
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCcC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCcc-cCcCCCCCCHH
Confidence 4578899999999999999999999987 3444443 556788889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHc
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLL 183 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li 183 (263)
|+|+..|+.+++++|++. +..++.+|.+|.||||+|+.. +..++++.+.
T Consensus 81 ~~A~~~~~~~~v~~Ll~~-------------------ga~~~~~~~~g~tpl~~A~~~-------~~~~~l~~l~ 129 (137)
T 3c5r_A 81 HDAAKNGHVDIVKLLLSY-------------------GASRNAVNIFGLRPVDYTDDE-------SMKSLLLLPE 129 (137)
T ss_dssp HHHHHTTCHHHHHHHHHT-------------------TCCTTCCCTTSCCGGGGCCCH-------HHHHHHSCC-
T ss_pred HHHHHcCCHHHHHHHHHc-------------------CCCCCCCCCCCCCHHHHHhhc-------cHHHHHhhcc
Confidence 999999999999999643 334678899999999999875 4555555443
No 74
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.83 E-value=2.2e-20 Score=151.16 Aligned_cols=131 Identities=12% Similarity=0.027 Sum_probs=112.4
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
..+..|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 31 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L 106 (167)
T 3v31_A 31 HTDEEGFTPLMWAAAHGQIAVVEFLLQN--GADPQLL-GKGRESALSLACSKGYTDIVKMLLDCGVDV-NEYDWNGGTPL 106 (167)
T ss_dssp CCCTTSCCHHHHHHHTTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHH
T ss_pred CCCCCCCCHHHHHHHCCCHHHHHHHHHc--CCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHHCCCCC-CcCCCCCCCHH
Confidence 4677899999999999999999999987 3344333 556678889999999999999999999995 99999999999
Q ss_pred HHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827 109 HRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP 188 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~ 188 (263)
|+|+..|+.+++++|+++ +..++.+|.+|.||||+|++. ++.++++.|+..+.+
T Consensus 107 ~~A~~~~~~~~v~~Ll~~-------------------g~~~~~~~~~g~t~l~~A~~~-------~~~~~~~~L~~~~~~ 160 (167)
T 3v31_A 107 LYAVHGNHVKCVKMLLES-------------------GADPTIETDSGYNSMDLAVAL-------GYRSVQQVIESHLLK 160 (167)
T ss_dssp HHHHHTTCHHHHHHHHHT-------------------TCCTTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHc-------------------CCCCCCcCCCCCCHHHHHHHc-------CcHHHHHHHHHHHHH
Confidence 999999999999999643 334577899999999999997 678999999887654
Q ss_pred C
Q 037827 189 V 189 (263)
Q Consensus 189 v 189 (263)
+
T Consensus 161 ~ 161 (167)
T 3v31_A 161 L 161 (167)
T ss_dssp H
T ss_pred H
Confidence 3
No 75
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.83 E-value=6.3e-20 Score=141.76 Aligned_cols=113 Identities=19% Similarity=0.213 Sum_probs=95.8
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR 110 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~ 110 (263)
+..+.+|||.|+..|+.+.++.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~--~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~d~~g~tpL~~ 79 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAK--GEDVNRT-LEGGRKPLHYAADCGQLEILEFLLLKGADI-NAPDKHHITPLLS 79 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSC-CTTSSCHHHHHHHTTCHHHHHHHHTTTCCT-TCCCTTSCCHHHH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHc--CCCcCcc-CCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHH
Confidence 45688999999999999999999987 3344444 556788889999999999999999999995 9999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827 111 AAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR 166 (263)
Q Consensus 111 Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~ 166 (263)
|+..|+.++|++|+++ +..++.+|.+|.||||+|+..
T Consensus 80 A~~~~~~~~v~~Ll~~-------------------ga~~~~~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 80 AVYEGHVSCVKLLLSK-------------------GADKTVKGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHTCHHHHHHHHHT-------------------TCCTTCCCTTSCCHHHHCCCH
T ss_pred HHHcCCHHHHHHHHHc-------------------CCCCCCcCCCCCCHHHHhCCH
Confidence 9999999999999643 334677899999999998653
No 76
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.82 E-value=3.9e-20 Score=154.85 Aligned_cols=143 Identities=12% Similarity=-0.002 Sum_probs=112.8
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcH----HHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKL----ELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~----eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
.++++||.|++.|+++.++.++.. +... ..+..|....++|+..|+. +++++|+++|+++ +.+|.+|+|||
T Consensus 5 ~~~~~l~~Aa~~g~~~~~~~l~~~-~~~~---~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadv-n~~d~~g~TpL 79 (186)
T 3t8k_A 5 SEYRTVSAAAMLGTYEDFLELFEK-GYED---KESVLKSNILYDVLRNNNDEARYKISMFLINKGADI-KSRTKEGTTLF 79 (186)
T ss_dssp HHCSSHHHHHHHSCHHHHHHHHHH-SSSC---HHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCS-SCCCTTCCCTH
T ss_pred ccccHHHHHHHcCCHHHHHHHHhc-Cccc---ccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCC-CCCCCCCCcHH
Confidence 467899999999999999999987 4332 2224467888999999975 5999999999995 99999999999
Q ss_pred HHHHHcCC------HHHHHHHHhCCCCC----------------C-----CCCHHHHHHHHHhCCCccccccCCCchHHH
Q 037827 109 HRAAKQGQ------RNVVCYLLEKTRAP----------------L-----DGSDDVAYGLLRKHPKLAWAEIAGTGKILE 161 (263)
Q Consensus 109 h~Aa~~g~------~evv~~Ll~~~a~p----------------~-----~~~~~va~~Ll~~~~~~~~~~D~~G~TPLH 161 (263)
|+|+..|+ .++|++|+++|+++ . .+..+++..|+...+..++.+|.+|.||||
T Consensus 80 h~a~~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~ 159 (186)
T 3t8k_A 80 FPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALE 159 (186)
T ss_dssp HHHHHHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHH
T ss_pred HHHHHcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHH
Confidence 99999998 68899999999872 1 112346666776356667888999999999
Q ss_pred HHhcCCCCCcCCcchHHHHHHcccCC
Q 037827 162 LLSKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 162 lAA~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
+|++. ++..+++.|.....
T Consensus 160 ~A~~~-------~~~~~v~~L~~~~~ 178 (186)
T 3t8k_A 160 FVKRC-------QKPIALKMMEDYIK 178 (186)
T ss_dssp HHHTT-------TCHHHHHHHHHHHH
T ss_pred HHHHc-------CCHHHHHHHHHHHH
Confidence 98887 55677777765543
No 77
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.82 E-value=2.9e-20 Score=157.67 Aligned_cols=135 Identities=11% Similarity=0.033 Sum_probs=106.4
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCcH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRY-EADLPNVRDEENLLP 107 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~TP 107 (263)
..+..|.||||.|+..|+.++++.|++. +..++.. +..|....++||..|+.++|++|+++ |+++ +.+|..|+||
T Consensus 68 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~-~~~d~~g~tp 143 (222)
T 3ehr_A 68 EQAESIDNPLHEAAKRGNLSWLRECLDN--RVGVNGL-DKAGSTALYWACHGGHKDIVEMLFTQPNIEL-NQQNKLGDTA 143 (222)
T ss_dssp HHEEEESCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHTTSTTCCC-CCCCTTSCCH
T ss_pred ccccccccccccccccCcHHHHHHHHhC--CCCcccc-CCCCCCHHHHHHHcCCHHHHHHHHcCCCCCc-cccCCCCCCH
Confidence 4566789999999999999999999987 3445444 56678888999999999999999999 9995 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
||+|+..|+.++|++|++ . +..++.+|.+|.||||+|+.. +..++++.++..++
T Consensus 144 L~~A~~~~~~~~v~~Ll~------------------~-ga~~~~~~~~g~t~l~~A~~~-------~~~~~l~~l~~~~~ 197 (222)
T 3ehr_A 144 LHAAAWKGYADIVQLLLA------------------K-GARTDLRNIEKKLAFDMATNA-------ACASLLKKKQGTDA 197 (222)
T ss_dssp HHHHHHHTCHHHHHHHHH------------------H-TCCSCCCCTTSCCHHHHCCSH-------HHHHHHC-------
T ss_pred HHHHHHcCCHHHHHHHHH------------------c-CCCCccccCCCCCHHHHhcch-------hHHHHHHHHhccch
Confidence 999999999999999964 3 334678899999999999976 78899999998887
Q ss_pred CCCCCC
Q 037827 188 PVQEEY 193 (263)
Q Consensus 188 ~v~~~~ 193 (263)
..+..+
T Consensus 198 ~~~~~~ 203 (222)
T 3ehr_A 198 VRTLSN 203 (222)
T ss_dssp ------
T ss_pred hhhccc
Confidence 665543
No 78
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.81 E-value=4.1e-20 Score=150.48 Aligned_cols=136 Identities=19% Similarity=0.089 Sum_probs=108.5
Q ss_pred CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827 71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW 150 (263)
Q Consensus 71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~ 150 (263)
....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++++ .++
T Consensus 15 ~~~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------------~~~ 74 (169)
T 2y1l_E 15 GKKLLEAARAGRDDEVRILMANGADV-NAEDASGWTPLHLAAFNGHLEIVEVLLKNGA-------------------DVN 74 (169)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTTC-------------------CTT
T ss_pred cchHHHHHHcCCHHHHHHHHHCCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------CCC
Confidence 34455999999999999999999995 9999999999999999999999999975443 356
Q ss_pred cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh
Q 037827 151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH 230 (263)
Q Consensus 151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (263)
.+|.+|.||||+|+.. ++.++++.|+..|++++..+..+.++.+.++. ....++..+|+.
T Consensus 75 ~~~~~g~t~L~~A~~~-------~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~ 134 (169)
T 2y1l_E 75 AVDHAGMTPLRLAALF-------GHLEIVEVLLKNGADVNANDMEGHTPLHLAAM-------------FGHLEIVEVLLK 134 (169)
T ss_dssp CCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH-------------TTCHHHHHHHHH
T ss_pred ccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-------------cCCHHHHHHHHH
Confidence 6788899999999987 67789999999888887776544433332222 222667778888
Q ss_pred hhccc----cccCCccceec
Q 037827 231 WFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 231 ~~~~~----~~~~~~~~~~~ 246 (263)
.|+|+ +.+.|||++|.
T Consensus 135 ~g~~~~~~~~~g~t~l~~A~ 154 (169)
T 2y1l_E 135 NGADVNAQDKFGKTAFDISI 154 (169)
T ss_dssp TTCCTTCCCTTSCCHHHHHH
T ss_pred cCCCCCCcCCCCCCHHHHHH
Confidence 88887 67899999985
No 79
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.81 E-value=1.1e-19 Score=156.44 Aligned_cols=133 Identities=14% Similarity=0.086 Sum_probs=111.6
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHH
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHR 110 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~ 110 (263)
+..+.||||.|+..|+.++|+.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+||||+
T Consensus 34 ~~~~~t~L~~A~~~g~~~~v~~Ll~~--g~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~d~~g~tpL~~ 109 (239)
T 1ycs_B 34 NPLPLALLLDSSLEGEFDLVQRIIYE--VDDPSLP-NDEGITALHNAVCAGHTEIVKFLVQFGVNV-NAADSDGWTPLHC 109 (239)
T ss_dssp ---CHHHHHHHHHHTCHHHHHHHTST--TSSCCCC-CTTSCCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTCCCHHHH
T ss_pred CchhhHHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHH
Confidence 35679999999999999999999987 3355444 566788899999999999999999999995 9999999999999
Q ss_pred HHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCc-hHHHHH--hcCCCCCcCCcchHHHHHHcccCC
Q 037827 111 AAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTG-KILELL--SKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 111 Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~-TPLHlA--A~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
|+..|+.++|++|+++| ..++.+|..|. ||||+| +.. ++.++++.|+..++
T Consensus 110 A~~~~~~~~v~~Ll~~g-------------------a~~~~~~~~~~~t~l~~a~~~~~-------g~~~~~~~Ll~~~a 163 (239)
T 1ycs_B 110 AASCNNVQVCKFLVESG-------------------AAVFAMTYSDMQTAADKCEEMEE-------GYTQCSQFLYGVQE 163 (239)
T ss_dssp HHHTTCHHHHHHHHHTT-------------------CCTTCCCSSSCCCHHHHCCSSST-------TCCCHHHHHHHHHH
T ss_pred HHHcCCHHHHHHHHHcC-------------------CCcceecCCCCcchHHHHHHhhh-------ccHHHHHHHHHhhh
Confidence 99999999999996543 33566776666 999998 443 67899999999999
Q ss_pred CCCCCC
Q 037827 188 PVQEEY 193 (263)
Q Consensus 188 ~v~~~~ 193 (263)
+++..+
T Consensus 164 ~~~~~~ 169 (239)
T 1ycs_B 164 KMGIMN 169 (239)
T ss_dssp HTTTTG
T ss_pred cccccc
Confidence 888764
No 80
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.80 E-value=6.8e-21 Score=167.95 Aligned_cols=171 Identities=15% Similarity=0.069 Sum_probs=129.1
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhccCCC-cccccccCCcCHHHHHHHhCCcHHHHHHHHHcCC-CCCCCCCCCCCcHHHHH
Q 037827 34 NYKQVTRYLLEDDWKGLEDYIMSKTPN-ALACIIVDQSSIFEFIVASTGKLELISTLIRYEA-DLPNVRDEENLLPIHRA 111 (263)
Q Consensus 34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~-~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga-~l~~~~d~~G~TPLh~A 111 (263)
.++++|.|+..|+++.++.++.. ... .++.. +..|....++||..|+.+++++|++.|+ + ++.+|..|+||||+|
T Consensus 76 ~~~~l~~a~~~~~~~~~~~l~~~-~~~~~~n~~-d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~-~~~~~~~g~tpL~~a 152 (276)
T 4hbd_A 76 CRSDAHPELVRRHLVTFRAMSAR-LLDYVVNIA-DSNGNTALHYSVSHANFPVVQQLLDSGVCK-VDKQNRAGYSPIMLT 152 (276)
T ss_dssp HSTTCCHHHHHHHHHHHHHHCHH-HHHHHHTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTSCCC-TTCCCTTSCCHHHHG
T ss_pred hccCCCHHHHHHHHHHHHHHHHH-HHhhcCcCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCc-CCCCCCCCCCHHHHH
Confidence 45677889999999999998875 222 23333 5667888899999999999999999998 7 599999999999999
Q ss_pred H-----HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827 112 A-----KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW 186 (263)
Q Consensus 112 a-----~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~ 186 (263)
+ ..++.+++++|+..| ...+..|..|.||||+|+++ ++.++++.|+..|
T Consensus 153 ~~~~~~~~~~~~~v~~Ll~~g-------------------~~~~~~~~~g~tpLh~A~~~-------g~~~~v~~Ll~~g 206 (276)
T 4hbd_A 153 ALATLKTQDDIETVLQLFRLG-------------------NINAKASQAGQTALMLAVSH-------GRVDVVKALLACE 206 (276)
T ss_dssp GGCCCCSHHHHHHHHHHHHHS-------------------CTTCCCTTTCCCHHHHHHHT-------TCHHHHHHHHHTT
T ss_pred HHHHhhhhhhHHHHHHHHHcC-------------------CCccccCCCCCCHHHHHHHc-------CCHHHHHHHHhCC
Confidence 9 567888888885432 34456677888888888887 6678888888888
Q ss_pred CCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh-hhccc----cccCCccceec
Q 037827 187 IPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH-WFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 187 ~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~----~~~~~~~~~~~ 246 (263)
++++..+..+.++.+.++... ..++..+|+. .|+|+ +.|.|||++|.
T Consensus 207 ad~n~~d~~G~TpLh~A~~~g-------------~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~ 258 (276)
T 4hbd_A 207 ADVNVQDDDGSTALMCACEHG-------------HKEIAGLLLAVPSCDISLTDRDGSTALMVAL 258 (276)
T ss_dssp CCTTCCCTTSCCHHHHHHHHT-------------CHHHHHHHHTSTTCCTTCCCTTSCCHHHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHCC-------------CHHHHHHHHhcCCCCCcCcCCCCCCHHHHHH
Confidence 888877655544443333222 2556667777 68877 77889998885
No 81
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.80 E-value=2.8e-19 Score=153.88 Aligned_cols=138 Identities=14% Similarity=0.037 Sum_probs=116.1
Q ss_pred CcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q 037827 69 QSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKL 148 (263)
Q Consensus 69 ~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~ 148 (263)
.+....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|++.| ..
T Consensus 20 ~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~g-------------------a~ 79 (229)
T 2vge_A 20 NPLVLLLDAALTGELEVVQQAVKEMNDP-SQPNEEGITALHNAICGANYSIVDFLITAG-------------------AN 79 (229)
T ss_dssp CHHHHHHHHHHHTCHHHHHHHHHHSSCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-------------------CC
T ss_pred chhHHHHHHHHcCCHHHHHHHHhcCCCC-CCCCCCCCCHHHHHHHcCCHHHHHHHHHCC-------------------CC
Confidence 3456677999999999999999999995 999999999999999999999999996433 34
Q ss_pred cccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCC-CCCCCCCCC--CChhhhhhhccccccccchhhh
Q 037827 149 AWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYN-PHAHAHSEN--VDGDLEKQLSETSHSAFGFELA 225 (263)
Q Consensus 149 ~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~-~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
++.+|.+|.||||+|++. ++.++++.|+..|++++..++ .+.++.+.+ +.... .++.
T Consensus 80 ~n~~d~~g~tpLh~A~~~-------g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~-------------~~~v 139 (229)
T 2vge_A 80 VNSPDSHGWTPLHCAASC-------NDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGY-------------ADCA 139 (229)
T ss_dssp TTCCCTTCCCHHHHHHHT-------TCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTH-------------HHHH
T ss_pred CCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcCh-------------HHHH
Confidence 677899999999999997 688999999999999998863 556666555 33333 6788
Q ss_pred HHHHhhhccc----cccCCccceec
Q 037827 226 YLLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 226 ~~~~~~~~~~----~~~~~~~~~~~ 246 (263)
.+|+..|+|+ +.+.|||+.+.
T Consensus 140 ~~Ll~~ga~~~~~~~~~~~~l~~~~ 164 (229)
T 2vge_A 140 TYLADVEQSMGLMNSGAVYALWDYS 164 (229)
T ss_dssp HHHHHHHHHTTTSGGGEEEESSCBC
T ss_pred HHHHHcCCCcccccCCchHHHHHHh
Confidence 8999999999 77889999663
No 82
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.79 E-value=1.1e-20 Score=175.13 Aligned_cols=171 Identities=13% Similarity=0.014 Sum_probs=124.2
Q ss_pred hhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCC--CCCCCCCC
Q 037827 27 KIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADL--PNVRDEEN 104 (263)
Q Consensus 27 ~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l--~~~~d~~G 104 (263)
...++.++.||||.|+..|+.++|+.|++.+.+......++..+....++||..|+.++|++|+++|++. ++..+.+
T Consensus 85 l~~~g~~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~- 163 (376)
T 2aja_A 85 AHKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN- 163 (376)
T ss_dssp HHHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-
T ss_pred HHHcCCCcCCHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-
Confidence 3456677889999999999999999999872211111112233466778999999999999999999852 0223333
Q ss_pred CcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccc--ccCCCchHHHHHh-cCCCCCcCCcchHHHHH
Q 037827 105 LLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWA--EIAGTGKILELLS-KRPKAFASGIRLGYWKG 181 (263)
Q Consensus 105 ~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~--~D~~G~TPLHlAA-~~~~~f~s~~~~~~~~~ 181 (263)
+||||+||..||.++|++|+++|++ ++. .|.+|.||||+|| ++ |+.++++.
T Consensus 164 ~TpLh~Aa~~G~~eiv~~Ll~~ga~-------------------~~~~~~d~~g~TpL~~Aa~~~-------G~~eiv~~ 217 (376)
T 2aja_A 164 YHAFRLAAENGHLHVLNRLCELAPT-------------------EATAMIQAENYYAFRWAAVGR-------GHHNVINF 217 (376)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHSCGG-------------------GHHHHHHHHHHHHHHHHHSTT-------CCHHHHHH
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCc-------------------cchhccCCCCCCHHHHHHHHC-------CCHHHHHH
Confidence 9999999999999999999755432 333 6778999999999 87 78899999
Q ss_pred HcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccc--hhhhHHHHhhhccccccCCccceec
Q 037827 182 LLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFG--FELAYLLLHWFVSFRVSTTPLTLAT 246 (263)
Q Consensus 182 li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (263)
|+..|+. + -+.+.+++.. .++..+|+..|+++....++++.|.
T Consensus 218 Ll~~ga~-----------------~-----~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~~l~~A~ 262 (376)
T 2aja_A 218 LLDCPVM-----------------L-----AYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSN 262 (376)
T ss_dssp HTTSHHH-----------------H-----HHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTS
T ss_pred HHhCCCc-----------------c-----chHHHHHHHCCCHHHHHHHHhcCcccccccHHHHHHH
Confidence 9976521 1 1122233333 4567788888999977778898886
No 83
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.78 E-value=1.6e-19 Score=144.46 Aligned_cols=132 Identities=17% Similarity=0.084 Sum_probs=105.9
Q ss_pred HHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccccc
Q 037827 74 EFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEI 153 (263)
Q Consensus 74 ~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D 153 (263)
.++|+..|+.+++++|+++|+++ + .|..|+||||+|+..|+.+++++|++.++ .++.+|
T Consensus 6 L~~A~~~g~~~~v~~Ll~~g~~~-~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~-------------------~~~~~~ 64 (153)
T 1awc_B 6 LLEAARAGQDDEVRILMANGAPF-T-TDWLGTSPLHLAAQYGHFSTTEVLLRAGV-------------------SRDART 64 (153)
T ss_dssp HHHHHHHTCHHHHHHHHHHTCCC-C-CCTTCCCHHHHHHHHTCHHHHHHHHTTTC-------------------CTTCCC
T ss_pred HHHHHHcCCHHHHHHHHHcCCCC-C-cCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------CCCCCC
Confidence 34899999999999999999985 5 68999999999999999999999975433 356678
Q ss_pred CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhhhc
Q 037827 154 AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHWFV 233 (263)
Q Consensus 154 ~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 233 (263)
.+|.||||+|++. ++.++++.|+..|++++..+..+.++.+.++. ....++..+|+..|+
T Consensus 65 ~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~-------------~~~~~~v~~Ll~~ga 124 (153)
T 1awc_B 65 KVDRTPLHMAASE-------GHANIVEVLLKHGADVNAKDMLKMTALHWATE-------------HNHQEVVELLIKYGA 124 (153)
T ss_dssp TTCCCHHHHHHHH-------TCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHH-------------TTCHHHHHHHHHTTC
T ss_pred CCCCCHHHHHHHc-------ChHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH-------------cCCHHHHHHHHHcCC
Confidence 8899999999986 67799999999998888776544444333222 222667778888898
Q ss_pred cc----cccCCccceec
Q 037827 234 SF----RVSTTPLTLAT 246 (263)
Q Consensus 234 ~~----~~~~~~~~~~~ 246 (263)
++ +.+.|||++|.
T Consensus 125 ~~~~~~~~g~t~l~~A~ 141 (153)
T 1awc_B 125 DVHTQSKFCKTAFDISI 141 (153)
T ss_dssp CTTCCCTTSCCHHHHHH
T ss_pred CccccCCCCCCHHHHHH
Confidence 88 78899999995
No 84
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.78 E-value=1e-19 Score=150.72 Aligned_cols=140 Identities=14% Similarity=-0.066 Sum_probs=112.8
Q ss_pred cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827 67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP 146 (263)
Q Consensus 67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~ 146 (263)
+..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|++.++
T Consensus 32 d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~------------------ 92 (192)
T 2rfm_A 32 DSYNRTPLMVACMLGMENAIDKLVENFDKL-EDKDIEGSTALIWAVKNNRLGIAEKLLSKGS------------------ 92 (192)
T ss_dssp CTTCCCHHHHHHHHTCGGGHHHHHHHHCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC------------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHhcccc-ccccccCccHHHHHHHcCCHHHHHHHHHCCC------------------
Confidence 455677888999999999999999999995 9999999999999999999999999965333
Q ss_pred CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827 147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY 226 (263)
Q Consensus 147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (263)
.++.+|..|.||||+|+.. ++.++++.|+..|++++..+..+.++.+.++... ..++..
T Consensus 93 -~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-------------~~~~v~ 151 (192)
T 2rfm_A 93 -NVNTKDFSGKTPLMWSIIF-------GYSEMSYFLLEHGANVNDRNLEGETPLIVASKYG-------------RSEIVK 151 (192)
T ss_dssp -CTTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHT-------------CHHHHH
T ss_pred -CCCCCCCCCCcHHHHHHHc-------CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC-------------CHHHHH
Confidence 3566788899999999886 6778999999988888877655544443333222 256777
Q ss_pred HHHhhhccc----cccCCccceec
Q 037827 227 LLLHWFVSF----RVSTTPLTLAT 246 (263)
Q Consensus 227 ~~~~~~~~~----~~~~~~~~~~~ 246 (263)
+|+..|+++ +.+.|||++|.
T Consensus 152 ~Ll~~ga~~~~~~~~g~t~l~~A~ 175 (192)
T 2rfm_A 152 KLLELGADISARDLTGLTAEASAR 175 (192)
T ss_dssp HHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred HHHHCCCCCCCcCCCCCCHHHHHH
Confidence 788888888 67889999985
No 85
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.78 E-value=8.7e-19 Score=144.72 Aligned_cols=114 Identities=20% Similarity=0.081 Sum_probs=97.3
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRD-EENLLP 107 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TP 107 (263)
..+..|.||||.|+..|+.+.++.|++. ..++.. +..|....++||..|+.+++++|+++|+++ +.+| ..|+||
T Consensus 39 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---~~~~~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~~~~~g~tp 113 (183)
T 3deo_A 39 DVVSEYETPWWTAARKADEQALSQLLED---RDVDAV-DENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTA 113 (183)
T ss_dssp HHHHHHHHHHHHHHHTTCHHHHHHHTTT---SCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSSCCH
T ss_pred cCCCCCCCHHHHHHHcCCHHHHHHHHhc---CCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCCH
Confidence 3456889999999999999999999984 344443 566788889999999999999999999995 9998 899999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKR 166 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~ 166 (263)
||+|+..|+.++|++|+++| ..++.+|.+|.||||+|++.
T Consensus 114 L~~A~~~~~~~~v~~Ll~~g-------------------a~~~~~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 114 LHMAAGYVRPEVVEALVELG-------------------ADIEVEDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHTTCHHHHHHHHHHT-------------------CCTTCCCTTSCCHHHHHHHH
T ss_pred HHHHHhcCcHHHHHHHHHcC-------------------CCCcCCCCCCCCHHHHHHHh
Confidence 99999999999999996433 33567788899999988875
No 86
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.77 E-value=1.7e-18 Score=127.47 Aligned_cols=93 Identities=20% Similarity=0.245 Sum_probs=82.9
Q ss_pred cChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHH
Q 037827 33 ANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAA 112 (263)
Q Consensus 33 ~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa 112 (263)
+|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~--g~~~n~~-d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~t~l~~A~ 76 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEA--GADVNAK-DKNGRTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAA 76 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHc--CCCCccc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHH
Confidence 478999999999999999999987 3445444 566788889999999999999999999995 999999999999999
Q ss_pred HcCCHHHHHHHHhCCCC
Q 037827 113 KQGQRNVVCYLLEKTRA 129 (263)
Q Consensus 113 ~~g~~evv~~Ll~~~a~ 129 (263)
..|+.+++++|+++|++
T Consensus 77 ~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 77 RNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HTTCHHHHHHHHHTTCC
T ss_pred HcCCHHHHHHHHHcCCC
Confidence 99999999999999874
No 87
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.77 E-value=3.2e-19 Score=143.17 Aligned_cols=141 Identities=17% Similarity=0.041 Sum_probs=112.5
Q ss_pred CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------CCCCH
Q 037827 71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------LDGSD 135 (263)
Q Consensus 71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~~~~~ 135 (263)
....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+. |+.+++++|++.++++ ..++.
T Consensus 6 ~~~L~~A~~~g~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~ 83 (162)
T 1ihb_A 6 GNELASAAARGDLEQLTSLLQNNVNV-NAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFL 83 (162)
T ss_dssp HHHHHHHHHHTCHHHHHHHTTSCCCT-TCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred hhHHHHHHHcCCHHHHHHHHhCCCCc-cccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCH
Confidence 34456899999999999999999995 9999999999999999 9999999999999862 56788
Q ss_pred HHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC-CCCCCCCCCCCCCCCCChhhhhhhcc
Q 037827 136 DVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP-VQEEYNPHAHAHSENVDGDLEKQLSE 214 (263)
Q Consensus 136 ~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~-v~~~~~~~~~~~~~~~~~~~~~~~~~ 214 (263)
+++..|+..+ ..++.+|.+|.||||+|++. ++.++++.|+..|.+ ++..+..+.++.+.++
T Consensus 84 ~~v~~Ll~~g-~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~---------- 145 (162)
T 1ihb_A 84 DTLQTLLEFQ-ADVNIEDNEGNLPLHLAAKE-------GHLRVVEFLVKHTASNVGHRNHKGDTACDLAR---------- 145 (162)
T ss_dssp HHHHHHHHTT-CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHH----------
T ss_pred HHHHHHHHcC-CCCCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHccCCCCCCcCCCCCcHHHHHH----------
Confidence 9999999875 55788999999999999997 678999999999986 4555443333332222
Q ss_pred ccccccchhhhHHHHhhhcc
Q 037827 215 TSHSAFGFELAYLLLHWFVS 234 (263)
Q Consensus 215 ~~~~~~~~~~~~~~~~~~~~ 234 (263)
.....++..+|+..|||
T Consensus 146 ---~~~~~~~~~~Ll~~GAd 162 (162)
T 1ihb_A 146 ---LYGRNEVVSLMQANGAG 162 (162)
T ss_dssp ---HTTCHHHHHHHHHTC--
T ss_pred ---HcCCHHHHHHHHHhCCC
Confidence 22236777888888886
No 88
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.77 E-value=1.1e-19 Score=164.02 Aligned_cols=185 Identities=12% Similarity=-0.032 Sum_probs=126.8
Q ss_pred HHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCC-
Q 037827 38 VTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQ- 116 (263)
Q Consensus 38 Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~- 116 (263)
+|.|+..+..++++.|++. +..++...+..|.+..++||..|+.++|++|+++|+++ +.+|.+|+||||+|+..|+
T Consensus 101 ~~~a~~~~~~~~~~~l~~~--g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~-n~~d~~g~TpLh~A~~~g~~ 177 (327)
T 1sw6_A 101 QHVSFDSLLQEVNDAFPNT--QLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNN 177 (327)
T ss_dssp ---CHHHHHHHHHHHCTTS--CCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TBCCTTCCCHHHHHHHSSHH
T ss_pred hHHHHHhhHHHHHHHHHhc--CCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHhccc
Confidence 4667777777777777765 55565533667888999999999999999999999995 9999999999999999998
Q ss_pred --HHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc---------
Q 037827 117 --RNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ--------- 185 (263)
Q Consensus 117 --~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~--------- 185 (263)
.++++.|+. .....++.+|.+|.||||+|++... ..++.++++.|+..
T Consensus 178 ~~~~~~~~ll~------------------~~~~~~~~~d~~g~tpLh~A~~~~~---~~g~~~~v~~Ll~~~~~~~~~~~ 236 (327)
T 1sw6_A 178 YDSGTFEALLD------------------YLYPCLILEDSMNRTILHHIIITSG---MTGCSAAAKYYLDILMGWIVKKQ 236 (327)
T ss_dssp HHTTCHHHHHH------------------HHGGGGGEECTTCCCHHHHHHHHHT---STTCHHHHHHHHHHHHHHHHHGG
T ss_pred ccHHHHHHHHH------------------hhhccccCCCCCCCCHHHHHHHHcc---ccccHHHHHHHHHHHHHHHhccc
Confidence 677776642 2223478889999999999998311 02678999999876
Q ss_pred -----------CCCCCCCCCCCCCCCCCC----------CChhhhhhhccccccccc--hhhhHHHHhhhccc----ccc
Q 037827 186 -----------WIPVQEEYNPHAHAHSEN----------VDGDLEKQLSETSHSAFG--FELAYLLLHWFVSF----RVS 238 (263)
Q Consensus 186 -----------~~~v~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~----~~~ 238 (263)
+++++..+..+.++.+.+ ++..+..+-+.+-+++.. .++..+|+..|||+ +.|
T Consensus 237 ~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G 316 (327)
T 1sw6_A 237 NRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG 316 (327)
T ss_dssp GCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS
T ss_pred chHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC
Confidence 566666654443333322 222233344455555554 56667788889999 889
Q ss_pred CCccceec
Q 037827 239 TTPLTLAT 246 (263)
Q Consensus 239 ~~~~~~~~ 246 (263)
.||||+|.
T Consensus 317 ~TpL~~A~ 324 (327)
T 1sw6_A 317 LRPVDFGA 324 (327)
T ss_dssp CCGGGGTC
T ss_pred CCHHHHHH
Confidence 99999996
No 89
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.76 E-value=4.6e-18 Score=150.67 Aligned_cols=126 Identities=9% Similarity=0.016 Sum_probs=107.5
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhccCCCccccc-----ccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827 34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACI-----IVDQSSIFEFIVAST---GKLELISTLIRYEADLPNVRDEENL 105 (263)
Q Consensus 34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~-----i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l~~~~d~~G~ 105 (263)
..++|+.|+..|+.+.++.++.. .... ... .+..|....++||.. |+.+++++|+++|+++ +.+|..|+
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~-g~~~-~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~i-n~~d~~g~ 206 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYAD-GVDL-TEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNL-DKQTGKGS 206 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHT-TCCT-TSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCT-TCCCTTCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHh-hcch-hhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCc-cccCCCCC
Confidence 35789999999999999999987 3332 221 144568888999999 9999999999999995 99999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827 106 LPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ 185 (263)
Q Consensus 106 TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~ 185 (263)
||||+|+..|+.++|++|+++ +..++.+|.+|.||||+|++. ++.++++.|+..
T Consensus 207 TpLh~A~~~g~~~~v~~Ll~~-------------------gad~~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ 260 (278)
T 1dcq_A 207 TALHYCCLTDNAECLKLLLRG-------------------KASIEIANESGETPLDIAKRL-------KHEHCEELLTQA 260 (278)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-------------------TCCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc-------------------CCCCCCccCCCCCHHHHHHHc-------CCHHHHHHHHHc
Confidence 999999999999999999643 344678899999999999997 678999999999
Q ss_pred CCC
Q 037827 186 WIP 188 (263)
Q Consensus 186 ~~~ 188 (263)
|+.
T Consensus 261 ga~ 263 (278)
T 1dcq_A 261 LSG 263 (278)
T ss_dssp HTT
T ss_pred CCC
Confidence 864
No 90
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.76 E-value=4e-18 Score=162.41 Aligned_cols=129 Identities=12% Similarity=0.063 Sum_probs=107.1
Q ss_pred hHHHHHHHHcCCHHHHHHHHhccCCCccccc-----ccCCcCHHHHHHHh---CCcHHHHHHHHHcCCCCCCCCCCCCCc
Q 037827 35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACI-----IVDQSSIFEFIVAS---TGKLELISTLIRYEADLPNVRDEENLL 106 (263)
Q Consensus 35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~-----i~~~g~iv~~~AA~---~G~~eiv~~Ll~~ga~l~~~~d~~G~T 106 (263)
.+.||.|+..|+++.|+.||+. +..++.. .+..|....++|+. .|+.++|++|+++|+++ +.+|..|+|
T Consensus 133 ~~~L~~A~~~g~~~~v~~ll~~--g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~v-n~~d~~g~T 209 (497)
T 3lvq_E 133 PQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGNT 209 (497)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHT--TCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCCT-TCCCSSSCC
T ss_pred HHHHHHHHhccCHHHHHHHHhh--cccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCCC-CccCCCCCc
Confidence 4679999999999999999997 2333322 14456888899954 99999999999999995 999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccC
Q 037827 107 PIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQW 186 (263)
Q Consensus 107 PLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~ 186 (263)
|||+||..|+.++|++|+++ ++.++.+|.+|.||||+|+.. ++.++++.|+..|
T Consensus 210 pLh~A~~~g~~~~v~~Ll~~-------------------ga~~~~~d~~g~tpl~~A~~~-------~~~~~~~~Ll~~g 263 (497)
T 3lvq_E 210 ALHYAALYNQPDCLKLLLKG-------------------RALVGTVNEAGETALDIARKK-------HHKECEELLEQAQ 263 (497)
T ss_dssp HHHHHTTTTCHHHHHHHHHT-------------------CCCCSCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTC
T ss_pred HHHHHHHcCCHHHHHHHHHc-------------------CCCCCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHhC
Confidence 99999999999999999644 344688899999999999987 7789999999999
Q ss_pred CCCCCC
Q 037827 187 IPVQEE 192 (263)
Q Consensus 187 ~~v~~~ 192 (263)
++++..
T Consensus 264 a~~~~~ 269 (497)
T 3lvq_E 264 AGTFAF 269 (497)
T ss_dssp C-----
T ss_pred CCCCCC
Confidence 988874
No 91
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.75 E-value=1.8e-18 Score=149.68 Aligned_cols=141 Identities=18% Similarity=0.058 Sum_probs=104.5
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRD-EENLLP 107 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TP 107 (263)
..+..|.||||.|+..|+.++++.|++. ..++.. +..|.+..++||..|+.++|++|+++|+++ +.+| ..|+||
T Consensus 40 ~~~~~g~t~L~~A~~~g~~~~v~~Ll~~---~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~-~~~~~~~g~t~ 114 (244)
T 3ui2_A 40 DVVSEYETPWWTAARKADEQALSQLLED---RDVDAV-DENGRTALLFVAGLGSDKCVRLLAEAGADL-DHRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHHHHTTTCHHHHHHTTTT---CCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHHTTCCT-TCCCSSSCCCH
T ss_pred ccccCCCCHHHHHHHcCCHHHHHHHHcC---CCCCCc-CCCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CcCCCCCCCCH
Confidence 3446789999999999999999999984 344444 566788899999999999999999999995 9998 889999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCC--CCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAP--LDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ 185 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p--~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~ 185 (263)
||+|+..|+.++|++|+++|+++ .......++.+... ...+..|.||||+|++. ++.++++.|+..
T Consensus 115 L~~A~~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~-----~~~~~~~~~~l~~a~~~-------g~~~iv~~L~~~ 182 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELGADIEVEDERGLTALELARE-----ILKTTPKGNPMQFGRRI-------GLEKVINVLEGQ 182 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHH-----HHTTCCCSSHHHHHHHH-------HHHHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH-----HHhccCCCCHHHHHHHc-------ChHHHHHHHHHh
Confidence 99999999999999998776652 11111111111111 11123455555555554 677899988875
Q ss_pred C
Q 037827 186 W 186 (263)
Q Consensus 186 ~ 186 (263)
+
T Consensus 183 ~ 183 (244)
T 3ui2_A 183 V 183 (244)
T ss_dssp H
T ss_pred c
Confidence 4
No 92
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.75 E-value=5.9e-18 Score=151.69 Aligned_cols=126 Identities=12% Similarity=0.084 Sum_probs=107.5
Q ss_pred ChHHHHHHHHcCCHHHHHHHHhccCCCccccc-----ccCCcCHHHHHHHhC---CcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827 34 NYKQVTRYLLEDDWKGLEDYIMSKTPNALACI-----IVDQSSIFEFIVAST---GKLELISTLIRYEADLPNVRDEENL 105 (263)
Q Consensus 34 ~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~-----i~~~g~iv~~~AA~~---G~~eiv~~Ll~~ga~l~~~~d~~G~ 105 (263)
..++|+.|+..|+++.++.|+.. ...++.. .+..|....++|+.. |+.+++++|+++|+++ +.+|..|+
T Consensus 151 ~~~~L~~A~~~g~~~~v~~ll~~--g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadv-n~~d~~G~ 227 (301)
T 2b0o_E 151 EPQRLWTAICNRDLLSVLEAFAN--GQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHL-DAKAADGN 227 (301)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHT--TCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCT-TCCCTTCC
T ss_pred hHHHHhhhhhccCHHHHHHHHhc--CCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCC-CCCCCCCC
Confidence 45789999999999999999987 2333331 245567888999987 9999999999999995 99999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHccc
Q 037827 106 LPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQ 185 (263)
Q Consensus 106 TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~ 185 (263)
||||+|+..|+.++|++|+++ +..++.+|.+|.||||+|+.. ++.++++.|+..
T Consensus 228 TpLh~A~~~g~~~~v~~Ll~~-------------------gad~~~~d~~G~TpL~~A~~~-------~~~~iv~~Ll~~ 281 (301)
T 2b0o_E 228 TALHYAALYNQPDCLKLLLKG-------------------RALVGTVNEAGETALDIARKK-------HHKECEELLEQA 281 (301)
T ss_dssp CHHHHHHHTTCHHHHHHHHHT-------------------TCCCSCCCTTSCCHHHHHHHH-------TCHHHHHHHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHHc-------------------CCCCCCcCCCCCCHHHHHHHc-------CCHHHHHHHHHh
Confidence 999999999999999999643 344678899999999999987 678999999998
Q ss_pred CCC
Q 037827 186 WIP 188 (263)
Q Consensus 186 ~~~ 188 (263)
|++
T Consensus 282 ga~ 284 (301)
T 2b0o_E 282 QAG 284 (301)
T ss_dssp HHH
T ss_pred cCC
Confidence 876
No 93
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.75 E-value=7e-18 Score=124.18 Aligned_cols=91 Identities=29% Similarity=0.270 Sum_probs=80.7
Q ss_pred CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827 71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW 150 (263)
Q Consensus 71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~ 150 (263)
....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++| ..++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~g~~~-n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------------a~~~ 62 (93)
T 1n0q_A 3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG-------------------ADVN 62 (93)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-------------------CCTT
T ss_pred CcHHHHHHHcCCHHHHHHHHHcCCCC-cccCCCCCCHHHHHHHcCCHHHHHHHHHcC-------------------CCCC
Confidence 44567999999999999999999995 999999999999999999999999996543 3467
Q ss_pred cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCC
Q 037827 151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIP 188 (263)
Q Consensus 151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~ 188 (263)
.+|.+|.||||+|++. ++.++++.|+..|++
T Consensus 63 ~~d~~g~t~l~~A~~~-------~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 63 AKDKNGRTPLHLAARN-------GHLEVVKLLLEAGAY 93 (93)
T ss_dssp CCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCC
T ss_pred ccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCC
Confidence 7899999999999997 678999999988863
No 94
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.75 E-value=9.4e-19 Score=137.60 Aligned_cols=127 Identities=14% Similarity=-0.049 Sum_probs=103.7
Q ss_pred cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827 67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP 146 (263)
Q Consensus 67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~ 146 (263)
+..|....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+. |+.++|++|+++ +
T Consensus 9 ~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~-------------------g 67 (136)
T 1d9s_A 9 GGSSDAGLATAAARGQVETVRQLLEAGADP-NALNRFGRRPIQVMMM-GSAQVAELLLLH-------------------G 67 (136)
T ss_dssp CCCCSCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTCCTTTTTSTT-SCHHHHHHHHHH-------------------T
T ss_pred CCCCccHHHHHHHcCCHHHHHHHHHcCCCc-CCcCCCCCCHHHHHHc-CCHHHHHHHHHC-------------------C
Confidence 455677888999999999999999999995 9999999999999999 999999999643 2
Q ss_pred CccccccCC-CchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhh
Q 037827 147 KLAWAEIAG-TGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELA 225 (263)
Q Consensus 147 ~~~~~~D~~-G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (263)
..++.+|.. |.||||+|++. ++.++++.|+..|++++..+..+.++.+.++... ..++.
T Consensus 68 ~~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-------------~~~~~ 127 (136)
T 1d9s_A 68 AEPNCADPATLTRPVHDAARE-------GFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG-------------HRDIA 127 (136)
T ss_dssp CCSSCCBTTTTBCHHHHHHHH-------TCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHT-------------CHHHH
T ss_pred CCCCCcCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC-------------CHHHH
Confidence 346778888 99999999997 6789999999999998887655544443333222 26677
Q ss_pred HHHHhhhcc
Q 037827 226 YLLLHWFVS 234 (263)
Q Consensus 226 ~~~~~~~~~ 234 (263)
.+|+..|||
T Consensus 128 ~~Ll~~Gad 136 (136)
T 1d9s_A 128 RYLHAATGD 136 (136)
T ss_dssp HHHHHHHCC
T ss_pred HHHHHcCCC
Confidence 788888876
No 95
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.74 E-value=5.8e-19 Score=141.96 Aligned_cols=137 Identities=13% Similarity=-0.042 Sum_probs=101.1
Q ss_pred CCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q 037827 68 DQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPK 147 (263)
Q Consensus 68 ~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~ 147 (263)
..+....++||..|+.+++++|+++|+++ +.+|..|+||||+|+ .|+.++|++|+++| .
T Consensus 10 ~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g-------------------~ 68 (156)
T 1bi7_B 10 EPSADWLATAAARGRVEEVRALLEAGANP-NAPNSYGRRPIQVMM-MGSARVAELLLLHG-------------------A 68 (156)
T ss_dssp CCSTTHHHHHHHHTCHHHHHHHHTTTCCT-TCCCSSSCCTTTSSC-TTCHHHHHHHHTTT-------------------C
T ss_pred ccchHHHHHHHHcCCHHHHHHHHHcCCCC-CCCCCCCCCHHHHHH-cCCHHHHHHHHHcC-------------------C
Confidence 34567778999999999999999999995 999999999999985 99999999996433 3
Q ss_pred ccccccCCCch-HHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827 148 LAWAEIAGTGK-ILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY 226 (263)
Q Consensus 148 ~~~~~D~~G~T-PLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (263)
.++.+|.+|.| |||+|+++ ++.++++.|+..|++++..+..+.++.+.++... ..++..
T Consensus 69 ~~~~~d~~g~ttpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~-------------~~~~v~ 128 (156)
T 1bi7_B 69 EPNCADPATLTRPVHDAARE-------GFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELG-------------HRDVAR 128 (156)
T ss_dssp CCCCCCTTTCCCHHHHHHHH-------TCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHT-------------CHHHHH
T ss_pred CCCCcCCCCCcHHHHHHHHC-------CCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhC-------------HHHHHH
Confidence 46778999999 99999997 7789999999999999887654444443332222 267778
Q ss_pred HHHhhhccc----cccCCcccee
Q 037827 227 LLLHWFVSF----RVSTTPLTLA 245 (263)
Q Consensus 227 ~~~~~~~~~----~~~~~~~~~~ 245 (263)
+|+..|++. +.++||.+-+
T Consensus 129 ~Ll~~ga~~~~~~~~g~t~~~~~ 151 (156)
T 1bi7_B 129 YLRAAAGGTRGSNHARIDAAEGP 151 (156)
T ss_dssp HHSSCC-----------------
T ss_pred HHHHcCCCCCccCcCcCcccccC
Confidence 888899999 7888988744
No 96
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.74 E-value=1e-17 Score=129.27 Aligned_cols=111 Identities=18% Similarity=0.027 Sum_probs=95.4
Q ss_pred cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827 70 SSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA 149 (263)
Q Consensus 70 g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~ 149 (263)
+....++|+..|+.+++++|++.|+++ +.+|..|+||||+|+..|+.++|++|++.+ ..+
T Consensus 7 ~~~~l~~A~~~~~~~~v~~ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------------~~~ 66 (123)
T 3aaa_C 7 CDKEFMWALKNGDLDEVKDYVAKGEDV-NRTLEGGRKPLHYAADCGQLEILEFLLLKG-------------------ADI 66 (123)
T ss_dssp CHHHHHHHHHTTCHHHHHHHHHTTCCT-TSCCTTSSCHHHHHHHTTCHHHHHHHHTTT-------------------CCT
T ss_pred cchHHHHHHHcCCHHHHHHHHHcCCCc-CccCCCCCcHHHHHHHcCCHHHHHHHHHcC-------------------CCC
Confidence 355667999999999999999999995 999999999999999999999999996533 346
Q ss_pred ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChh
Q 037827 150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGD 207 (263)
Q Consensus 150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~ 207 (263)
+.+|.+|.||||+|+.. ++.++++.|+..|++++..+..+.++.+.++..+
T Consensus 67 ~~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~ 117 (123)
T 3aaa_C 67 NAPDKHHITPLLSAVYE-------GHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQA 117 (123)
T ss_dssp TCCCTTSCCHHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHH
T ss_pred CcCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHH
Confidence 77899999999999997 6789999999999999988876666666555444
No 97
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.73 E-value=1.6e-17 Score=153.39 Aligned_cols=129 Identities=12% Similarity=0.073 Sum_probs=108.9
Q ss_pred hcccChHHHHHHHHc-CCHHHHHHHHhccCCCcccccc-cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcH
Q 037827 30 KDIANYKQVTRYLLE-DDWKGLEDYIMSKTPNALACII-VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLP 107 (263)
Q Consensus 30 ~~~~~~t~Lh~Aa~~-G~~e~v~~Ll~~~~~~~~~~~i-~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TP 107 (263)
....+.++||.|+.. |++++++.||+. +..++... +..|....++||..|+.++|++|+++|+++ +.+|..|+||
T Consensus 195 ~~~~~~t~L~~Aa~~~g~~~~v~~LL~~--Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadv-n~~d~~G~Tp 271 (368)
T 3jue_A 195 GSLHPGALLFRASGHPPSLPTMADALAH--GADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANV-NQADSAGRGP 271 (368)
T ss_dssp --CCHHHHHHHHTSSSCCHHHHHHHHHT--TCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSCCH
T ss_pred ccCCCCcHHHHHHHccCCHHHHHHHHHc--CCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCC-CCCCCCCCCH
Confidence 444567899999999 999999999987 34444442 145678889999999999999999999995 9999999999
Q ss_pred HHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827 108 IHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 108 Lh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
||+|+..|+.++|++|+.+| ..++.+|.+|.||||+|+.. ++.++++.|+..+.
T Consensus 272 Lh~A~~~g~~~~v~~LL~~G-------------------ad~~~~d~~G~TpL~~A~~~-------g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 272 LHHATILGHTGLACLFLKRG-------------------ADLGARDSEGRDPLTIAMET-------ANADIVTLLRLAKM 325 (368)
T ss_dssp HHHHHHHTCHHHHHHHHHTT-------------------CCTTCCCTTSCCHHHHHHHT-------TCHHHHHHHHHHHC
T ss_pred HHHHHHcCcHHHHHHHHHCc-------------------CCCCCcCCCCCCHHHHHHHC-------CCHHHHHHHHHcCC
Confidence 99999999999999996433 34678899999999999997 67899999987763
No 98
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.73 E-value=2.8e-17 Score=128.93 Aligned_cols=115 Identities=19% Similarity=0.154 Sum_probs=100.5
Q ss_pred cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827 67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP 146 (263)
Q Consensus 67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~ 146 (263)
+..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++++
T Consensus 7 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g------------------- 66 (137)
T 3c5r_A 7 NHRGETLLHIASIKGDIPSVEYLLQNGSDP-NVKDHAGWTPLHEACNHGHLKVVELLLQHK------------------- 66 (137)
T ss_dssp CTTCCCHHHHHHHHTCHHHHHHHHHTTCCS-CCCCTTSCCHHHHHHHTTCHHHHHHHHHTT-------------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CcCCCCCCCHHHHHHHcCCHHHHHHHHHcC-------------------
Confidence 455678888999999999999999999995 999999999999999999999999996543
Q ss_pred CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827 147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL 208 (263)
Q Consensus 147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~ 208 (263)
..++.+|.+|.||||+|++. ++.++++.|+..|++++..+..+.++.+.++....
T Consensus 67 ~~~~~~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~ 121 (137)
T 3c5r_A 67 ALVNTTGYQNDSPLHDAAKN-------GHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESM 121 (137)
T ss_dssp CCTTCCCGGGCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHH
T ss_pred CcccCcCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccH
Confidence 34677899999999999997 67899999999999999988777777777766554
No 99
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.73 E-value=2.3e-17 Score=147.81 Aligned_cols=129 Identities=16% Similarity=0.024 Sum_probs=104.6
Q ss_pred HHHhCCcHHHHHHHHHcCCCCCCC------CCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827 76 IVASTGKLELISTLIRYEADLPNV------RDEENLLPIHRAAKQ---GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP 146 (263)
Q Consensus 76 ~AA~~G~~eiv~~Ll~~ga~l~~~------~d~~G~TPLh~Aa~~---g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~ 146 (263)
.|+..|+.+.++.|++.|+++ +. +|..|+||||+|+.. |+.++|++|+. . +
T Consensus 157 ~A~~~g~~~~v~~ll~~g~d~-~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~------------------~-g 216 (301)
T 2b0o_E 157 TAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ------------------N-G 216 (301)
T ss_dssp HHHHTTCHHHHHHHHHTTCCT-TSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHH------------------H-S
T ss_pred hhhhccCHHHHHHHHhcCCcc-cccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHh------------------c-C
Confidence 899999999999999999995 87 799999999999997 89999999964 3 3
Q ss_pred CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhH
Q 037827 147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAY 226 (263)
Q Consensus 147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 226 (263)
..++.+|.+|.||||+|+.. ++.++++.|+..|++++..+..+.++.+.++.... .++..
T Consensus 217 advn~~d~~G~TpLh~A~~~-------g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~-------------~~iv~ 276 (301)
T 2b0o_E 217 GHLDAKAADGNTALHYAALY-------NQPDCLKLLLKGRALVGTVNEAGETALDIARKKHH-------------KECEE 276 (301)
T ss_dssp SCTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTC-------------HHHHH
T ss_pred CCCCCCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCC-------------HHHHH
Confidence 34677899999999999997 78899999999999999887655444433332222 56777
Q ss_pred HHHhhhccccccCCccceec
Q 037827 227 LLLHWFVSFRVSTTPLTLAT 246 (263)
Q Consensus 227 ~~~~~~~~~~~~~~~~~~~~ 246 (263)
+|+..+++ .+.||||+|.
T Consensus 277 ~Ll~~ga~--~g~tpLh~A~ 294 (301)
T 2b0o_E 277 LLEQAQAG--TFAFPLHVDY 294 (301)
T ss_dssp HHHHHHHH--TTSSCCC---
T ss_pred HHHHhcCC--CCCChhHHHH
Confidence 88888888 6889999996
No 100
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.72 E-value=2.5e-18 Score=143.82 Aligned_cols=153 Identities=11% Similarity=0.022 Sum_probs=112.2
Q ss_pred HHHHhCCcHHHHHHHHHcCCCCCCCCC-CCCCcHHHHHHHcCCH----HHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827 75 FIVASTGKLELISTLIRYEADLPNVRD-EENLLPIHRAAKQGQR----NVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA 149 (263)
Q Consensus 75 ~~AA~~G~~eiv~~Ll~~ga~l~~~~d-~~G~TPLh~Aa~~g~~----evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~ 149 (263)
+.||..|+.+.++.++..+.+ .++ ..|+||||+|+.+|+. ++|++|+++ +..+
T Consensus 11 ~~Aa~~g~~~~~~~l~~~~~~---~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~-------------------Gadv 68 (186)
T 3t8k_A 11 SAAAMLGTYEDFLELFEKGYE---DKESVLKSNILYDVLRNNNDEARYKISMFLINK-------------------GADI 68 (186)
T ss_dssp HHHHHHSCHHHHHHHHHHSSS---CHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHT-------------------TCCS
T ss_pred HHHHHcCCHHHHHHHHhcCcc---cccccCCCCHHHHHHHcCCcchHHHHHHHHHHC-------------------CCCC
Confidence 379999999999999988754 355 7899999999999985 488888543 3457
Q ss_pred ccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCC-CCCCCCCChh-hhhhhccccccccchhhhHH
Q 037827 150 WAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHA-HAHSENVDGD-LEKQLSETSHSAFGFELAYL 227 (263)
Q Consensus 150 ~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 227 (263)
+.+|.+|.||||+|+..+.. .....+++++.|+..|++|+..+..+. ++.|.++.-. .++ ...++..+
T Consensus 69 n~~d~~g~TpLh~a~~~~~~-~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~---------~~~~iv~~ 138 (186)
T 3t8k_A 69 KSRTKEGTTLFFPLFQGGGN-DITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDEN---------EMIPLYKL 138 (186)
T ss_dssp SCCCTTCCCTHHHHHHHCTT-CHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHH---------HHHHHHHH
T ss_pred CCCCCCCCcHHHHHHHcCCc-chhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChh---------hHHHHHHH
Confidence 88999999999999987421 001236899999999999999987776 6666554411 000 01345677
Q ss_pred HHh-hhccc----cccCCccceeccccccCc-hhhhhhhhc
Q 037827 228 LLH-WFVSF----RVSTTPLTLATNDVRLPH-SKIQYLHQY 262 (263)
Q Consensus 228 ~~~-~~~~~----~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 262 (263)
|+. .|+|+ +.|+|||++|... .+ .-++||-.|
T Consensus 139 Ll~~~gad~~~~d~~G~TpL~~A~~~---~~~~~v~~L~~~ 176 (186)
T 3t8k_A 139 IFSQSGLQLLIKDKWGLTALEFVKRC---QKPIALKMMEDY 176 (186)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHTT---TCHHHHHHHHHH
T ss_pred HHHhcCCCCcccCCCCCCHHHHHHHc---CCHHHHHHHHHH
Confidence 888 89999 8899999999632 22 335666544
No 101
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.72 E-value=5.6e-18 Score=135.23 Aligned_cols=132 Identities=14% Similarity=0.031 Sum_probs=103.5
Q ss_pred HHHHHHhCCcHHHHHHHHHc-CCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcccc
Q 037827 73 FEFIVASTGKLELISTLIRY-EADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWA 151 (263)
Q Consensus 73 v~~~AA~~G~~eiv~~Ll~~-ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~ 151 (263)
..++||..|+.++++.|++. +.+ ++.+|..|+||||+ +..|+.+++++|++.|+ .++.
T Consensus 5 ~L~~A~~~g~~~~v~~ll~~~~~~-~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~-------------------~~~~ 63 (156)
T 1bd8_A 5 RLSGAAARGDVQEVRRLLHRELVH-PDALNRFGKTALQV-MMFGSTAIALELLKQGA-------------------SPNV 63 (156)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCC-TTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTC-------------------CTTC
T ss_pred HHHHHHHhCCHHHHHHHHHhhCcC-ccccCCCCCcHHHH-HHcCCHHHHHHHHHCCC-------------------CCCC
Confidence 34589999999999999999 337 59999999999999 99999999999965433 3567
Q ss_pred ccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHhh
Q 037827 152 EIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLHW 231 (263)
Q Consensus 152 ~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 231 (263)
+|.+|.||||+|++. ++.++++.|+..|++++..+..+.++.+.++... ..++..+|+..
T Consensus 64 ~~~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~ 123 (156)
T 1bd8_A 64 QDTSGTSPVHDAART-------GFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEG-------------HTAVVSFLAAE 123 (156)
T ss_dssp CCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHT-------------CHHHHHHHHTT
T ss_pred cCCCCCCHHHHHHHc-------CcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhC-------------hHHHHHHHHhc
Confidence 788999999999987 6779999999999888877655444443333222 25556667766
Q ss_pred hccc----cccCCccceec
Q 037827 232 FVSF----RVSTTPLTLAT 246 (263)
Q Consensus 232 ~~~~----~~~~~~~~~~~ 246 (263)
+++ +.+.|||++|.
T Consensus 124 -~~~~~~~~~g~t~l~~A~ 141 (156)
T 1bd8_A 124 -SDLHRRDARGLTPLELAL 141 (156)
T ss_dssp -SCTTCCCTTSCCHHHHHH
T ss_pred -cCCCCcCCCCCCHHHHHH
Confidence 777 78899999996
No 102
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.72 E-value=1e-19 Score=168.49 Aligned_cols=131 Identities=15% Similarity=0.074 Sum_probs=101.4
Q ss_pred cccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCC--CCCCCCcHH
Q 037827 31 DIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNV--RDEENLLPI 108 (263)
Q Consensus 31 ~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~--~d~~G~TPL 108 (263)
+..+.||||.|+..|+.++|++|++. .++.....+...+.+..++||..|+.++|++|+++|+++ +. +|..|+|||
T Consensus 125 ~~~~~tpL~~Aa~~G~~eiv~~Ll~~-gad~~~~~i~~~~~TpLh~Aa~~G~~eiv~~Ll~~ga~~-~~~~~d~~g~TpL 202 (376)
T 2aja_A 125 QAENYQAFRLAAENGHLHVLNRLCEL-APTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE-ATAMIQAENYYAF 202 (376)
T ss_dssp CHHHHHHHHHHHHTTCHHHHHHHHHS-CTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSCGGG-HHHHHHHHHHHHH
T ss_pred ccCCCCHHHHHHHcCCHHHHHHHHhC-CCCccccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCcc-chhccCCCCCCHH
Confidence 44578899999999999999999998 322100011111156777999999999999999999995 77 899999999
Q ss_pred HHHH-HcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCC
Q 037827 109 HRAA-KQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWI 187 (263)
Q Consensus 109 h~Aa-~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~ 187 (263)
|+|+ .+||.++|++|++.|+ .|.||||+|+++ ++.++++.|+..|+
T Consensus 203 ~~Aa~~~G~~eiv~~Ll~~ga--------------------------~~~taL~~Aa~~-------g~~evv~lL~~~ga 249 (376)
T 2aja_A 203 RWAAVGRGHHNVINFLLDCPV--------------------------MLAYAEIHEFEY-------GEKYVNPFIARHVN 249 (376)
T ss_dssp HHHHSTTCCHHHHHHHTTSHH--------------------------HHHHHHHCTTTT-------TTTTHHHHHHHHHH
T ss_pred HHHHHHCCCHHHHHHHHhCCC--------------------------ccchHHHHHHHC-------CCHHHHHHHHhcCc
Confidence 9999 9999999999975321 267888877776 56678888887777
Q ss_pred CCCCCCCCC
Q 037827 188 PVQEEYNPH 196 (263)
Q Consensus 188 ~v~~~~~~~ 196 (263)
+++..+++.
T Consensus 250 ~~~~~~~~l 258 (376)
T 2aja_A 250 RLKEMHDAF 258 (376)
T ss_dssp HHHHHHTTT
T ss_pred ccccccHHH
Confidence 776665555
No 103
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.72 E-value=8.5e-18 Score=132.08 Aligned_cols=103 Identities=23% Similarity=0.104 Sum_probs=88.9
Q ss_pred CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827 71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW 150 (263)
Q Consensus 71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~ 150 (263)
....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++++ ..++
T Consensus 15 ~t~l~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g-------------------~~~~ 74 (136)
T 2jab_A 15 GKKLLEAARAGQDDEVRILMANGADV-NAKDEYGLTPLYLATAHGHLEIVEVLLKNG-------------------ADVN 74 (136)
T ss_dssp HHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-------------------CCTT
T ss_pred cHHHHHHHHhCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcC-------------------CCCC
Confidence 55667999999999999999999995 999999999999999999999999996543 3457
Q ss_pred cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCC
Q 037827 151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAH 200 (263)
Q Consensus 151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~ 200 (263)
.+|.+|.||||+|++. ++.++++.|+..|++++..+..+.++.
T Consensus 75 ~~d~~g~t~L~~A~~~-------~~~~~v~~Ll~~g~~~~~~~~~g~tpl 117 (136)
T 2jab_A 75 AVDAIGFTPLHLAAFI-------GHLEIAEVLLKHGADVNAQDKFGKTAF 117 (136)
T ss_dssp CCCTTCCCHHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred cCCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCcCcCCCCCCHH
Confidence 7899999999999997 678999999999999887765444433
No 104
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.71 E-value=2.1e-17 Score=126.29 Aligned_cols=124 Identities=25% Similarity=0.193 Sum_probs=100.2
Q ss_pred CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827 71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW 150 (263)
Q Consensus 71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~ 150 (263)
....++|+..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|++.+ ..++
T Consensus 3 ~t~L~~A~~~~~~~~v~~Ll~~~~~~-~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g-------------------~~~~ 62 (126)
T 1n0r_A 3 RTPLHLAARNGHLEVVKLLLEAGADV-NAKDKNGRTPLHLAARNGHLEVVKLLLEAG-------------------ADVN 62 (126)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTT-------------------CCTT
T ss_pred ccHHHHHHHcCcHHHHHHHHHcCCCC-CCcCCCCCcHHHHHHHcCcHHHHHHHHHcC-------------------CCCc
Confidence 44567999999999999999999995 999999999999999999999999997543 3356
Q ss_pred cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHHHh
Q 037827 151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLLLH 230 (263)
Q Consensus 151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 230 (263)
.+|..|.||||+|++. ++.++++.|+..|++++..+..+.++.+.++ .....++..+|+.
T Consensus 63 ~~~~~g~t~l~~A~~~-------~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~-------------~~~~~~~~~~Ll~ 122 (126)
T 1n0r_A 63 AKDKNGRTPLHLAARN-------GHLEVVKLLLEAGADVNAKDKNGRTPLHLAA-------------RNGHLEVVKLLLE 122 (126)
T ss_dssp CCCTTSCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH-------------HTTCHHHHHHHHH
T ss_pred ccCCCCCcHHHHHHHc-------ChHHHHHHHHHcCCCCcccCCCCCCHHHHHH-------------HcCcHHHHHHHHH
Confidence 7789999999999997 6789999999999988877654443332222 2223677788888
Q ss_pred hhcc
Q 037827 231 WFVS 234 (263)
Q Consensus 231 ~~~~ 234 (263)
.|||
T Consensus 123 ~Gad 126 (126)
T 1n0r_A 123 AGAY 126 (126)
T ss_dssp HTCC
T ss_pred cCCC
Confidence 8875
No 105
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.69 E-value=1.7e-16 Score=140.56 Aligned_cols=178 Identities=10% Similarity=-0.080 Sum_probs=128.7
Q ss_pred hhhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCc------------------------CHH-----HH
Q 037827 25 DEKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQS------------------------SIF-----EF 75 (263)
Q Consensus 25 ~~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g------------------------~iv-----~~ 75 (263)
.++...|..+.++++.+...|+....+.+-.. -+.....+.+... ... .+
T Consensus 57 v~s~~~d~~~~~~l~~~~~~GN~~~n~i~e~~-l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~ 135 (278)
T 1dcq_A 57 MQSLTLDVLGTSELLLAKNIGNAGFNEIMECC-LPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLC 135 (278)
T ss_dssp EEETTTSCCCGGGGHHHHHSCHHHHHHHHTTT-CCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHH
T ss_pred eeeeecCCCCHHHHHHHHHcCcHHHHHHHHhh-CChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhh
Confidence 33455677788899999999988776655332 1111100001100 111 11
Q ss_pred HHHhCCcHHHHHHHHHcCCCC-----CCCCCCCCCcHHHHHHHc---CCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCC
Q 037827 76 IVASTGKLELISTLIRYEADL-----PNVRDEENLLPIHRAAKQ---GQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPK 147 (263)
Q Consensus 76 ~AA~~G~~eiv~~Ll~~ga~l-----~~~~d~~G~TPLh~Aa~~---g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~ 147 (263)
.|+..|+.+.++.+++.|+++ ++..|..|+||||+|+.. |+.++|++|++ . +.
T Consensus 136 ~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~------------------~-ga 196 (278)
T 1dcq_A 136 EAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQ------------------N-SG 196 (278)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHH------------------H-CS
T ss_pred hHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHH------------------C-CC
Confidence 789999999999999999994 244589999999999999 89999999964 3 33
Q ss_pred ccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHH
Q 037827 148 LAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYL 227 (263)
Q Consensus 148 ~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 227 (263)
.++.+|.+|.||||+|+.. ++.++++.|+..|++++..+..+.+|.+.++... ..++..+
T Consensus 197 ~in~~d~~g~TpLh~A~~~-------g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~-------------~~~~v~~ 256 (278)
T 1dcq_A 197 NLDKQTGKGSTALHYCCLT-------DNAECLKLLLRGKASIEIANESGETPLDIAKRLK-------------HEHCEEL 256 (278)
T ss_dssp CTTCCCTTCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-------------CHHHHHH
T ss_pred CccccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHcC-------------CHHHHHH
Confidence 4678899999999999997 7889999999999999988765555554333222 2567778
Q ss_pred HHhhhccccccCCccceec
Q 037827 228 LLHWFVSFRVSTTPLTLAT 246 (263)
Q Consensus 228 ~~~~~~~~~~~~~~~~~~~ 246 (263)
|+..|+ ++||+|.+.
T Consensus 257 Ll~~ga----~~~~~~~~v 271 (278)
T 1dcq_A 257 LTQALS----GRFNSHVHV 271 (278)
T ss_dssp HHHHHT----TCCCSSCCC
T ss_pred HHHcCC----CCCCcceee
Confidence 888887 478888775
No 106
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.68 E-value=3.5e-17 Score=124.55 Aligned_cols=93 Identities=16% Similarity=0.197 Sum_probs=53.4
Q ss_pred hhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHH
Q 037827 29 IKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPI 108 (263)
Q Consensus 29 ~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPL 108 (263)
.+|.+|+||||.|+..|+.++++.|++. +..++.. +..|....++|+..|+.+++++|+++|+++ +.+|..|+|||
T Consensus 4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~--g~~~~~~-d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~tpl 79 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGHAEEVKKLLSK--GADVNAR-SKDGNTPLHLAAKNGHAEIVKLLLAKGADV-NARSKDGNTPE 79 (115)
T ss_dssp CCSCSSCCHHHHHHHHTCHHHHHHHTTT--TCCSSCC-CSSSCCTTHHHHTTTCHHHHHHHTTTTCCT-TCCCTTCCCTT
T ss_pred ccCCCCCCHHHHHHHcCCHHHHHHHHHc--CCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCC-cccCCCCCCHH
Confidence 3456666666666666666666666655 2223222 333444455666666666666666666663 66666666666
Q ss_pred HHHHHcCCHHHHHHHHh
Q 037827 109 HRAAKQGQRNVVCYLLE 125 (263)
Q Consensus 109 h~Aa~~g~~evv~~Ll~ 125 (263)
|+|+..|+.+++++|++
T Consensus 80 ~~A~~~~~~~~~~~Ll~ 96 (115)
T 2l6b_A 80 HLAKKNGHHEIVKLLDA 96 (115)
T ss_dssp HHHHTTTCHHHHHHHHT
T ss_pred HHHHHCCCHHHHHHHHH
Confidence 66666666666666543
No 107
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.68 E-value=4.6e-17 Score=137.79 Aligned_cols=112 Identities=12% Similarity=-0.007 Sum_probs=97.2
Q ss_pred CHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCccc
Q 037827 71 SIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLAW 150 (263)
Q Consensus 71 ~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~~ 150 (263)
....++||..|+.+++++|++.|+++ +.+|..|+||||+||..|+.++|++|+. ..+..++
T Consensus 74 ~t~L~~A~~~g~~~~v~~Ll~~g~~~-~~~~~~g~t~L~~A~~~~~~~~v~~Ll~------------------~~g~~~~ 134 (222)
T 3ehr_A 74 DNPLHEAAKRGNLSWLRECLDNRVGV-NGLDKAGSTALYWACHGGHKDIVEMLFT------------------QPNIELN 134 (222)
T ss_dssp SCHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTSCCHHHHHHHTTCHHHHHHHTT------------------STTCCCC
T ss_pred ccccccccccCcHHHHHHHHhCCCCc-cccCCCCCCHHHHHHHcCCHHHHHHHHc------------------CCCCCcc
Confidence 45667999999999999999999995 9999999999999999999999999964 3345578
Q ss_pred cccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhh
Q 037827 151 AEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDL 208 (263)
Q Consensus 151 ~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~ 208 (263)
.+|.+|.||||+|++. ++.++++.|+..|++++..+..+.++.+.++....
T Consensus 135 ~~d~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~ 185 (222)
T 3ehr_A 135 QQNKLGDTALHAAAWK-------GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAAC 185 (222)
T ss_dssp CCCTTSCCHHHHHHHH-------TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHH
T ss_pred ccCCCCCCHHHHHHHc-------CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhH
Confidence 8899999999999997 77899999999999999988777666666665544
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.67 E-value=7.1e-17 Score=122.86 Aligned_cols=92 Identities=25% Similarity=0.257 Sum_probs=79.4
Q ss_pred cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCC---------------C
Q 037827 67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAP---------------L 131 (263)
Q Consensus 67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p---------------~ 131 (263)
+..|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.+++++|+++++++ .
T Consensus 6 d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~-~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~ 84 (115)
T 2l6b_A 6 SKDGNTPLHNAAKNGHAEEVKKLLSKGADV-NARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKK 84 (115)
T ss_dssp SCSSCCHHHHHHHHTCHHHHHHHTTTTCCS-SCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHT
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCC-CCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHH
Confidence 445677788999999999999999999995 999999999999999999999999999999862 6
Q ss_pred CCCHHHHHHHHHhCCCccccccCCCchHH
Q 037827 132 DGSDDVAYGLLRKHPKLAWAEIAGTGKIL 160 (263)
Q Consensus 132 ~~~~~va~~Ll~~~~~~~~~~D~~G~TPL 160 (263)
.+..+++..|++. +..++.++..|.||=
T Consensus 85 ~~~~~~~~~Ll~~-ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 85 NGHHEIVKLLDAK-GADVNARSWGSSHHH 112 (115)
T ss_dssp TTCHHHHHHHHTT-SSSHHHHSCCCC---
T ss_pred CCCHHHHHHHHHc-CCCCCcCCccccccc
Confidence 7889999999876 455788899999883
No 109
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.66 E-value=7.7e-16 Score=117.01 Aligned_cols=94 Identities=14% Similarity=0.094 Sum_probs=80.1
Q ss_pred hhhhhcccChHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCC
Q 037827 26 EKIIKDIANYKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENL 105 (263)
Q Consensus 26 ~~~~~~~~~~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~ 105 (263)
.....+.+|.++||.|+..|+.++++.|++. +..++.. +..|....++||..|+.+++++|+++|+++ +.+|..|+
T Consensus 16 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~--g~~i~~~-d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~-~~~d~~g~ 91 (110)
T 2zgd_A 16 RGSHMGSDLGKKLLEAARAGQDDEVRILMAN--GADVAAK-DKNGSTPLHLAARNGHLEVVKLLLEAGADV-XAQDKFGK 91 (110)
T ss_dssp ------CCHHHHHHHHHHHTCHHHHHHHHHT--TCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT-TCCCTTSC
T ss_pred cccccCCccchHHHHHHHcCCHHHHHHHHHc--CCCCCcc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCc-cccccCCC
Confidence 3456788899999999999999999999987 3455444 566788889999999999999999999995 99999999
Q ss_pred cHHHHHHHcCCHHHHHHH
Q 037827 106 LPIHRAAKQGQRNVVCYL 123 (263)
Q Consensus 106 TPLh~Aa~~g~~evv~~L 123 (263)
||||+|+..|+.+++++|
T Consensus 92 tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 92 TAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CHHHHHHHHTCHHHHHHH
T ss_pred cHHHHHHHcCCHHHHHHh
Confidence 999999999999999987
No 110
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.65 E-value=1.1e-16 Score=152.46 Aligned_cols=131 Identities=16% Similarity=0.029 Sum_probs=100.5
Q ss_pred HHHHHhCCcHHHHHHHHHcCCCCCCCC------CCCCCcHHHHHHH---cCCHHHHHHHHhCCCCCCCCCHHHHHHHHHh
Q 037827 74 EFIVASTGKLELISTLIRYEADLPNVR------DEENLLPIHRAAK---QGQRNVVCYLLEKTRAPLDGSDDVAYGLLRK 144 (263)
Q Consensus 74 ~~~AA~~G~~eiv~~Ll~~ga~l~~~~------d~~G~TPLh~Aa~---~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~ 144 (263)
.+.|+..|+.++|+.|++.|+++ +.+ |..|+||||+|+. .|+.++|++|++ .
T Consensus 136 L~~A~~~g~~~~v~~ll~~g~~~-n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~------------------~ 196 (497)
T 3lvq_E 136 LWTAICNRDLLSVLEAFANGQDF-GQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQ------------------N 196 (497)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCS-SSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHH------------------H
T ss_pred HHHHHhccCHHHHHHHHhhcccc-cCCCCCcccccccchHHHHHHHhcccccHHHHHHHHH------------------c
Confidence 34899999999999999999995 887 8999999999976 999999999964 3
Q ss_pred CCCccccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhh
Q 037827 145 HPKLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFEL 224 (263)
Q Consensus 145 ~~~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 224 (263)
+..++.+|.+|.||||+||.. ++.++++.|+..|++++..+..+.++.+.++.. ...++
T Consensus 197 -ga~vn~~d~~g~TpLh~A~~~-------g~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~-------------~~~~~ 255 (497)
T 3lvq_E 197 -GGHLDAKAADGNTALHYAALY-------NQPDCLKLLLKGRALVGTVNEAGETALDIARKK-------------HHKEC 255 (497)
T ss_dssp -SCCTTCCCSSSCCHHHHHTTT-------TCHHHHHHHHHTCCCCSCCCTTCCCHHHHHHHT-------------TCHHH
T ss_pred -CCCCCccCCCCCcHHHHHHHc-------CCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHc-------------CCHHH
Confidence 344788899999999999997 788999999999999999876665555433322 23677
Q ss_pred hHHHHhhhccccccCCccceec
Q 037827 225 AYLLLHWFVSFRVSTTPLTLAT 246 (263)
Q Consensus 225 ~~~~~~~~~~~~~~~~~~~~~~ 246 (263)
..+|+..|++.. .||||++.
T Consensus 256 ~~~Ll~~ga~~~--~~~~h~~~ 275 (497)
T 3lvq_E 256 EELLEQAQAGTF--AFPLHVDY 275 (497)
T ss_dssp HHHHHHTCC-------------
T ss_pred HHHHHHhCCCCC--CCcceeec
Confidence 888999999874 38999873
No 111
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.63 E-value=3.9e-16 Score=128.69 Aligned_cols=102 Identities=17% Similarity=0.077 Sum_probs=86.9
Q ss_pred cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827 70 SSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA 149 (263)
Q Consensus 70 g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~ 149 (263)
|....++||..|+.++++.|++ |+++ +.+|..|+||||+|+..|+.++|++|+++|+ .+
T Consensus 44 g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga-------------------~~ 102 (183)
T 3deo_A 44 YETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGA-------------------DL 102 (183)
T ss_dssp HHHHHHHHHHTTCHHHHHHHTT-TSCT-TCCCTTSCCHHHHHHHHTCHHHHHHHHHTTC-------------------CT
T ss_pred CCCHHHHHHHcCCHHHHHHHHh-cCCC-CCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC-------------------CC
Confidence 3566679999999999999999 9994 9999999999999999999999999965433 34
Q ss_pred cccc-CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCC
Q 037827 150 WAEI-AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHA 199 (263)
Q Consensus 150 ~~~D-~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~ 199 (263)
+.+| .+|.||||+|+.. ++.++++.|+..|++++..+..+.++
T Consensus 103 ~~~~~~~g~tpL~~A~~~-------~~~~~v~~Ll~~ga~~~~~d~~g~tp 146 (183)
T 3deo_A 103 DHRDMRGGLTALHMAAGY-------VRPEVVEALVELGADIEVEDERGLTA 146 (183)
T ss_dssp TCCCSSSSCCHHHHHHHT-------TCHHHHHHHHHHTCCTTCCCTTSCCH
T ss_pred CcCCCCCCCCHHHHHHhc-------CcHHHHHHHHHcCCCCcCCCCCCCCH
Confidence 5566 8999999999987 77899999999999988776544333
No 112
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.62 E-value=3.6e-16 Score=135.18 Aligned_cols=106 Identities=16% Similarity=0.059 Sum_probs=90.2
Q ss_pred cCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCcc
Q 037827 70 SSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKLA 149 (263)
Q Consensus 70 g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~~ 149 (263)
|....++||..|+.++++.|++ |+++ +.+|..|+||||+|+..|+.++|++|+++|+ .+
T Consensus 45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~-~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga-------------------~~ 103 (244)
T 3ui2_A 45 YETPWWTAARKADEQALSQLLE-DRDV-DAVDENGRTALLFVAGLGSDKCVRLLAEAGA-------------------DL 103 (244)
T ss_dssp HHHHHHHHHTTTCHHHHHHTTT-TCCT-TCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC-------------------CT
T ss_pred CCCHHHHHHHcCCHHHHHHHHc-CCCC-CCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC-------------------CC
Confidence 4566779999999999999999 9994 9999999999999999999999999975433 35
Q ss_pred cccc-CCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCC
Q 037827 150 WAEI-AGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSEN 203 (263)
Q Consensus 150 ~~~D-~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~ 203 (263)
+.+| .+|.||||+|+++ ++.++++.|+..|++++..+..+.++.+.+
T Consensus 104 ~~~~~~~g~t~L~~A~~~-------g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A 151 (244)
T 3ui2_A 104 DHRDMRGGLTALHMAAGY-------VRPEVVEALVELGADIEVEDERGLTALELA 151 (244)
T ss_dssp TCCCSSSCCCHHHHHHHT-------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHH
T ss_pred CcCCCCCCCCHHHHHHHc-------CCHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence 5566 7899999999997 778999999999999998876665555443
No 113
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.61 E-value=9.4e-16 Score=141.53 Aligned_cols=141 Identities=12% Similarity=0.017 Sum_probs=97.6
Q ss_pred HHHHHHHhC-CcHHHHHHHHHcCCCCCCCCC--CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCCCc
Q 037827 72 IFEFIVAST-GKLELISTLIRYEADLPNVRD--EENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHPKL 148 (263)
Q Consensus 72 iv~~~AA~~-G~~eiv~~Ll~~ga~l~~~~d--~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~~~ 148 (263)
...++|+.. |+.++++.|+++|+++ +..| ..|+||||+|+..|+.++|++|+.+ +..
T Consensus 201 t~L~~Aa~~~g~~~~v~~LL~~Gadv-n~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~-------------------Gad 260 (368)
T 3jue_A 201 ALLFRASGHPPSLPTMADALAHGADV-NWVNGGQDNATPLIQATAANSLLACEFLLQN-------------------GAN 260 (368)
T ss_dssp HHHHHHTSSSCCHHHHHHHHHTTCCT-TCCCTTTTCCCHHHHHHHTTCHHHHHHHHHT-------------------TCC
T ss_pred cHHHHHHHccCCHHHHHHHHHcCCCC-CccccccCCCCHHHHHHHCCCHHHHHHHHHc-------------------CCC
Confidence 455689999 9999999999999995 9998 8999999999999999999999643 344
Q ss_pred cccccCCCchHHHHHhcCCCCCcCCcchHHHHHHcccCCCCCCCCCCCCCCCCCCCChhhhhhhccccccccchhhhHHH
Q 037827 149 AWAEIAGTGKILELLSKRPKAFASGIRLGYWKGLLYQWIPVQEEYNPHAHAHSENVDGDLEKQLSETSHSAFGFELAYLL 228 (263)
Q Consensus 149 ~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~li~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 228 (263)
++.+|.+|.||||+|+.. ++.++++.|+..|++++..+..+.++.+.++... ..++..+|
T Consensus 261 vn~~d~~G~TpLh~A~~~-------g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g-------------~~~iv~lL 320 (368)
T 3jue_A 261 VNQADSAGRGPLHHATIL-------GHTGLACLFLKRGADLGARDSEGRDPLTIAMETA-------------NADIVTLL 320 (368)
T ss_dssp TTCCCTTSCCHHHHHHHH-------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT-------------CHHHHHHH
T ss_pred CCCCCCCCCCHHHHHHHc-------CcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCC-------------CHHHHHHH
Confidence 678899999999999987 6789999999999999888665544443332221 24556666
Q ss_pred Hhhhccc-------cccCCccceeccccccC
Q 037827 229 LHWFVSF-------RVSTTPLTLATNDVRLP 252 (263)
Q Consensus 229 ~~~~~~~-------~~~~~~~~~~~~~~~~~ 252 (263)
+..++.- ..+.|||+++..-..+.
T Consensus 321 l~~~~~~~~~~~~~~~~~t~l~i~~~~~~~~ 351 (368)
T 3jue_A 321 RLAKMREAEAAQGQAGDETYLDIFRDFSLMA 351 (368)
T ss_dssp HHHHC--------------------------
T ss_pred HHcCCCcccccccCCCCCCHHHHHHHHHhhc
Confidence 6655332 66889999987443333
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.60 E-value=2.8e-15 Score=113.91 Aligned_cols=89 Identities=20% Similarity=0.144 Sum_probs=76.7
Q ss_pred cCCcCHHHHHHHhCCcHHHHHHHHHcCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCCCHHHHHHHHHhCC
Q 037827 67 VDQSSIFEFIVASTGKLELISTLIRYEADLPNVRDEENLLPIHRAAKQGQRNVVCYLLEKTRAPLDGSDDVAYGLLRKHP 146 (263)
Q Consensus 67 ~~~g~iv~~~AA~~G~~eiv~~Ll~~ga~l~~~~d~~G~TPLh~Aa~~g~~evv~~Ll~~~a~p~~~~~~va~~Ll~~~~ 146 (263)
+.+|....++||..|+.+++++|+++|+++ +.+|..|+||||+|+..|+.++|++|+++ +
T Consensus 21 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i-~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~-------------------g 80 (110)
T 2zgd_A 21 GSDLGKKLLEAARAGQDDEVRILMANGADV-AAKDKNGSTPLHLAARNGHLEVVKLLLEA-------------------G 80 (110)
T ss_dssp -CCHHHHHHHHHHHTCHHHHHHHHHTTCCT-TCCCTTCCCHHHHHHHTTCHHHHHHHHHT-------------------T
T ss_pred CCccchHHHHHHHcCCHHHHHHHHHcCCCC-CccCCCCCCHHHHHHHcCCHHHHHHHHHc-------------------C
Confidence 445567778999999999999999999995 99999999999999999999999999643 3
Q ss_pred CccccccCCCchHHHHHhcCCCCCcCCcchHHHHHH
Q 037827 147 KLAWAEIAGTGKILELLSKRPKAFASGIRLGYWKGL 182 (263)
Q Consensus 147 ~~~~~~D~~G~TPLHlAA~~~~~f~s~~~~~~~~~l 182 (263)
..++.+|.+|.||||+|++. ++.++++.|
T Consensus 81 a~~~~~d~~g~tpl~~A~~~-------~~~~~~~~L 109 (110)
T 2zgd_A 81 ADVXAQDKFGKTAFDISIDN-------GNEDLAEIL 109 (110)
T ss_dssp CCTTCCCTTSCCHHHHHHHH-------TCHHHHHHH
T ss_pred CCccccccCCCcHHHHHHHc-------CCHHHHHHh
Confidence 34677899999999999987 667888765
No 115
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=37.87 E-value=24 Score=21.22 Aligned_cols=19 Identities=16% Similarity=0.067 Sum_probs=15.0
Q ss_pred HHHHHHHHcCCHHHHHHHH
Q 037827 36 KQVTRYLLEDDWKGLEDYI 54 (263)
Q Consensus 36 t~Lh~Aa~~G~~e~v~~Ll 54 (263)
..++.|+..||.+.++.|=
T Consensus 15 QqiyvA~seGd~etv~~Le 33 (40)
T 1gp8_A 15 KQMDAAASKGDVETYRKLK 33 (40)
T ss_dssp HHHHHHHTTSCHHHHHHHH
T ss_pred HHHHHHHhcCCHHHHHHHH
Confidence 4577889999999888764
No 116
>3mkq_B Coatomer subunit alpha; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae}
Probab=24.08 E-value=1.1e+02 Score=24.47 Aligned_cols=51 Identities=8% Similarity=-0.146 Sum_probs=28.4
Q ss_pred hHHHHHHHHcCCHHHHHHHHhccCCCcccccccCCcCHHHHHHHhCCcHHHHHHHHHc
Q 037827 35 YKQVTRYLLEDDWKGLEDYIMSKTPNALACIIVDQSSIFEFIVASTGKLELISTLIRY 92 (263)
Q Consensus 35 ~t~Lh~Aa~~G~~e~v~~Ll~~~~~~~~~~~i~~~g~iv~~~AA~~G~~eiv~~Ll~~ 92 (263)
.+.+-.|+..|+++.+..+.+. ... ...|..+-..|-..|+.++++.-..+
T Consensus 9 ~~rF~LAL~lg~l~~A~e~a~~---l~~----~~~Wk~Lg~~AL~~gn~~lAe~cy~~ 59 (177)
T 3mkq_B 9 HIRFDLALEYGNLDAALDEAKK---LND----SITWERLIQEALAQGNASLAEMIYQT 59 (177)
T ss_dssp HHHHHHHHHTTCHHHHHHHHHH---HCC----HHHHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHhcCCHHHHHHHHHH---hCC----HHHHHHHHHHHHHcCChHHHHHHHHH
Confidence 4566778888888888777664 000 01122223355566666666555444
Done!