Query 037834
Match_columns 91
No_of_seqs 129 out of 1019
Neff 7.3
Searched_HMMs 46136
Date Fri Mar 29 04:49:14 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037834.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037834hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PLN02216 protein SRG1 99.9 2.1E-26 4.5E-31 170.2 7.8 82 4-86 275-357 (357)
2 PLN02904 oxidoreductase 99.9 5.3E-26 1.1E-30 168.1 7.5 84 4-88 272-356 (357)
3 PLN02947 oxidoreductase 99.9 3.7E-26 8E-31 169.8 6.2 84 4-88 289-373 (374)
4 PLN02639 oxidoreductase, 2OG-F 99.9 1E-25 2.2E-30 165.3 7.5 81 4-85 255-336 (337)
5 PLN02758 oxidoreductase, 2OG-F 99.9 1.2E-25 2.7E-30 166.3 7.5 82 4-86 277-359 (361)
6 PLN02912 oxidoreductase, 2OG-F 99.9 1.9E-25 4.1E-30 164.7 7.5 84 4-88 261-347 (348)
7 PLN03178 leucoanthocyanidin di 99.9 2.1E-25 4.6E-30 164.9 6.7 83 4-87 275-359 (360)
8 PLN02365 2-oxoglutarate-depend 99.9 8E-25 1.7E-29 158.5 7.9 82 4-86 216-298 (300)
9 PLN02254 gibberellin 3-beta-di 99.9 7.6E-25 1.6E-29 162.0 7.4 81 4-87 275-355 (358)
10 PLN03001 oxidoreductase, 2OG-F 99.9 1.1E-24 2.4E-29 155.5 7.7 80 4-84 180-260 (262)
11 PLN02276 gibberellin 20-oxidas 99.9 7E-25 1.5E-29 162.2 6.6 83 4-87 270-353 (361)
12 PLN02393 leucoanthocyanidin di 99.9 9.1E-25 2E-29 161.7 7.2 82 4-86 278-360 (362)
13 PLN02299 1-aminocyclopropane-1 99.9 2.1E-24 4.6E-29 157.7 7.4 83 4-87 223-309 (321)
14 PLN02704 flavonol synthase 99.9 5.3E-24 1.2E-28 156.1 7.5 69 4-73 263-331 (335)
15 PLN02156 gibberellin 2-beta-di 99.9 7.8E-24 1.7E-28 155.5 7.9 72 4-76 245-316 (335)
16 PLN02750 oxidoreductase, 2OG-F 99.9 1.1E-23 2.4E-28 154.9 7.2 72 4-76 259-330 (345)
17 PLN02997 flavonol synthase 99.9 1.6E-23 3.4E-28 153.3 7.3 70 4-74 247-316 (325)
18 PLN03002 oxidoreductase, 2OG-F 99.9 2.8E-23 6.1E-28 152.2 7.6 71 4-76 252-322 (332)
19 KOG0143 Iron/ascorbate family 99.9 2.5E-23 5.4E-28 152.3 6.8 78 4-83 242-320 (322)
20 PLN02485 oxidoreductase 99.9 4.5E-23 9.8E-28 150.7 7.2 72 4-76 254-327 (329)
21 PLN02515 naringenin,2-oxogluta 99.9 6.3E-23 1.4E-27 151.8 7.9 71 4-76 261-331 (358)
22 PTZ00273 oxidase reductase; Pr 99.9 1.1E-22 2.4E-27 148.0 7.0 71 4-76 243-313 (320)
23 PLN00417 oxidoreductase, 2OG-F 99.9 3.4E-22 7.3E-27 147.4 6.7 76 4-82 268-344 (348)
24 PLN02403 aminocyclopropanecarb 99.9 1.4E-21 3.1E-26 142.0 7.2 79 4-90 219-300 (303)
25 PLN02984 oxidoreductase, 2OG-F 99.8 1.2E-19 2.6E-24 133.7 6.7 73 4-87 264-340 (341)
26 COG3491 PcbC Isopenicillin N s 99.7 2E-17 4.4E-22 120.2 4.4 62 4-66 239-301 (322)
27 PF03171 2OG-FeII_Oxy: 2OG-Fe( 99.0 2.8E-10 6.1E-15 69.5 2.9 34 4-37 65-98 (98)
28 PF13759 2OG-FeII_Oxy_5: Putat 70.8 3.1 6.7E-05 25.2 1.6 18 16-33 82-100 (101)
29 PF13640 2OG-FeII_Oxy_3: 2OG-F 63.9 4 8.6E-05 24.2 1.1 22 15-36 78-100 (100)
30 TIGR02466 conserved hypothetic 59.9 6.9 0.00015 27.2 1.8 20 16-35 178-198 (201)
31 COG3615 TehB Uncharacterized p 53.0 14 0.0003 23.1 2.2 23 16-38 77-99 (99)
32 PF12851 Tet_JBP: Oxygenase do 45.9 16 0.00034 24.6 1.8 11 26-36 160-170 (171)
33 PF14549 P22_Cro: DNA-binding 37.1 18 0.00038 20.4 0.8 13 3-15 39-51 (60)
34 COG2879 Uncharacterized small 35.0 49 0.0011 19.1 2.4 20 57-76 37-56 (65)
35 PRK09744 DNA-binding transcrip 31.4 29 0.00063 20.6 1.1 12 3-14 40-51 (75)
36 TIGR00589 ogt O-6-methylguanin 23.9 50 0.0011 19.4 1.3 10 16-25 52-61 (80)
37 KOG1653 Single-stranded DNA-bi 22.3 22 0.00048 24.3 -0.6 14 3-16 80-93 (175)
38 PF11990 DUF3487: Protein of u 21.8 66 0.0014 20.6 1.6 28 42-70 2-29 (121)
No 1
>PLN02216 protein SRG1
Probab=99.93 E-value=2.1e-26 Score=170.21 Aligned_cols=82 Identities=23% Similarity=0.450 Sum_probs=78.1
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
+||+||||+|||++|||++++.++|||||||++|+. |+.|+|+++|+++++|++|++++++||+..++++.. ++..++
T Consensus 275 ~L~~~TNG~~kS~~HRVv~~~~~~R~Si~~F~~P~~-d~~i~p~~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~~~~ 353 (357)
T PLN02216 275 ILEIITNGTYRSIEHRGVVNSEKERLSVATFHNTGM-GKEIGPAKSLVERQKAALFKSLTTKEYFDGLFSRELDGKAYLD 353 (357)
T ss_pred hhHhhcCCeeeccCceeecCCCCCEEEEEEEecCCC-CCeEeCcHHHcCCCCCCCCCCcCHHHHHHHHHhcccCCcchhh
Confidence 799999999999999999998899999999999994 999999999999999999999999999999999888 999999
Q ss_pred cccc
Q 037834 83 KLKL 86 (91)
Q Consensus 83 ~~~~ 86 (91)
.+||
T Consensus 354 ~~~~ 357 (357)
T PLN02216 354 AMRI 357 (357)
T ss_pred hhcC
Confidence 9875
No 2
>PLN02904 oxidoreductase
Probab=99.93 E-value=5.3e-26 Score=168.11 Aligned_cols=84 Identities=27% Similarity=0.410 Sum_probs=78.9
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
|||+||||+|||++|||++++.++|||||||++|+. |+.|+|+++|+++++|++|++++++||+..++++.. +++.++
T Consensus 272 ~Le~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~p~~-d~~i~Pl~~~v~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~ 350 (357)
T PLN02904 272 QVEVMSNGIYKSVVHRVTVNKDYKRLSFASLHSLPL-HKKISPAPELVNENKPAAYGEFSFNDFLDYISSNDITQERFID 350 (357)
T ss_pred HHHHHhCCeeeccCCcccCCCCCCEEEEEEeecCCC-CCeEeCCHHHcCCCCCCcCCCCCHHHHHHHHHhcccCcchHHH
Confidence 799999999999999999998899999999999995 999999999999999999999999999999999888 888899
Q ss_pred cccccC
Q 037834 83 KLKLAS 88 (91)
Q Consensus 83 ~~~~~~ 88 (91)
.+++..
T Consensus 351 ~~~~~~ 356 (357)
T PLN02904 351 TLKKNN 356 (357)
T ss_pred HhccCC
Confidence 888753
No 3
>PLN02947 oxidoreductase
Probab=99.93 E-value=3.7e-26 Score=169.85 Aligned_cols=84 Identities=27% Similarity=0.415 Sum_probs=79.2
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
+||+||||+|||++|||++++.++|||||||++|+ .|+.|+|+++|+++++|++|++++++||+..+.++.. ++..++
T Consensus 289 ~Lq~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~-~d~~i~Pl~~lv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~l~ 367 (374)
T PLN02947 289 HLEIFSNGRYKSVLHRVRVNSTKPRISVASLHSLP-FERVVGPAPELVDEQNPRRYMDTDFATFLAYLASAEGKHKNFLE 367 (374)
T ss_pred eeeeeeCCEEeccccccccCCCCCEEEEEEEecCC-CCCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhccCchhhhh
Confidence 68999999999999999999889999999999999 4999999999999999999999999999999988888 899999
Q ss_pred cccccC
Q 037834 83 KLKLAS 88 (91)
Q Consensus 83 ~~~~~~ 88 (91)
.+|+-+
T Consensus 368 ~~~~~~ 373 (374)
T PLN02947 368 SRKLIT 373 (374)
T ss_pred hhhccC
Confidence 998754
No 4
>PLN02639 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.92 E-value=1e-25 Score=165.32 Aligned_cols=81 Identities=23% Similarity=0.420 Sum_probs=76.0
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
+||+||||+|||+.|||++++.++|||+|||++|+. |++|+|+++|+++++|++|++++++||++.++.+.. ++..|+
T Consensus 255 ~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~-d~~i~pl~~~~~~~~p~~y~p~~~~e~~~~~~~~~~~~~~~l~ 333 (337)
T PLN02639 255 QLQALSNGRYKSVWHRAVVNTDKERMSVASFLCPCD-DAVISPAKKLTDDGTAAVYRDFTYAEYYKKFWSRNLDQEHCLE 333 (337)
T ss_pred HHHHHhCCeeeccCcccccCCCCCEEEEEEEecCCC-CceEeCchHHcCCCCCCCCCCCCHHHHHHHHHhccCCCchhhH
Confidence 799999999999999999988899999999999995 999999999999999999999999999999999888 888888
Q ss_pred ccc
Q 037834 83 KLK 85 (91)
Q Consensus 83 ~~~ 85 (91)
.|+
T Consensus 334 ~~~ 336 (337)
T PLN02639 334 LFK 336 (337)
T ss_pred hhc
Confidence 775
No 5
>PLN02758 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.92 E-value=1.2e-25 Score=166.30 Aligned_cols=82 Identities=27% Similarity=0.408 Sum_probs=77.1
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
+||+||||+|||+.|||++++.++|||+|||++|+. |+.|+|+++|+++++|++|++++++||+..++++.. ++..++
T Consensus 277 ~L~~~SNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~-d~~i~pl~elv~~~~p~~Y~~~~~~ey~~~~~~~~~~~~~~~~ 355 (361)
T PLN02758 277 TLEVLTNGKYKSVEHRAVTNKEKDRLSIVTFYAPSY-EVELGPMPELVDDENPCKYRRYNHGEYSRHYVTSKLQGKKTLE 355 (361)
T ss_pred hhhhhcCCeeecccceeecCCCCCEEEEEEEecCCC-CCeEeCCHHHcCCCCCCcCCCccHHHHHHHHHhcccCchhhhh
Confidence 799999999999999999998899999999999994 999999999999999999999999999999999888 888888
Q ss_pred cccc
Q 037834 83 KLKL 86 (91)
Q Consensus 83 ~~~~ 86 (91)
.+|+
T Consensus 356 ~~~~ 359 (361)
T PLN02758 356 FAKI 359 (361)
T ss_pred hhcc
Confidence 8775
No 6
>PLN02912 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.92 E-value=1.9e-25 Score=164.66 Aligned_cols=84 Identities=30% Similarity=0.469 Sum_probs=78.0
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCC--CCCCCCcccHHHHHHHHHHccC-Ccch
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEV--NPPLYPEITLKDIYNNQSLKNN-ELSA 80 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~--~p~~y~~~~~~ey~~~~~~~~~-~~~~ 80 (91)
|||+||||+|||++|||++++.++|||+|||++|+. |+.|+|+++|++++ +|++|++++++||+..++.+.+ +++.
T Consensus 261 ~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~p~~-d~~i~pl~~~v~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~ 339 (348)
T PLN02912 261 QMQVISNDKYKSVLHRAVVNTDKERISIPTFYCPSE-DAVIGPAQELINEEEDSLAIYRNFTYAEYFEKFWDTAFATESC 339 (348)
T ss_pred HHHHHhCCEEEcccccccCCCCCCEEEEEEEecCCC-CCeEeCCHHHhCcCCCCCCCCCCCcHHHHHHHHHhcccCCcch
Confidence 799999999999999999988899999999999995 99999999999765 4899999999999999999888 8889
Q ss_pred hccccccC
Q 037834 81 LDKLKLAS 88 (91)
Q Consensus 81 l~~~~~~~ 88 (91)
|+.+|.++
T Consensus 340 l~~~~~~~ 347 (348)
T PLN02912 340 IDSFKAST 347 (348)
T ss_pred hhhhhccc
Confidence 99998875
No 7
>PLN03178 leucoanthocyanidin dioxygenase; Provisional
Probab=99.92 E-value=2.1e-25 Score=164.89 Aligned_cols=83 Identities=27% Similarity=0.443 Sum_probs=77.1
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcE-eecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchh
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRR-YGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSAL 81 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~-i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l 81 (91)
+||+||||+|||++|||++++.++|||||||++|+. |+. +.|+++|+++++|++|++++++||+..++.+.+ +++.+
T Consensus 275 ~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~-d~~v~~pl~~~v~~~~p~~y~p~~~~eyl~~~~~~~~~~~~~~ 353 (360)
T PLN03178 275 TLEILSNGRYKSILHRGLVNKEKVRISWAVFCEPPK-EKIILKPLPELVSKEEPPKFPPRTFGQHVSHKLFKKPQDERNI 353 (360)
T ss_pred HHHHHhCCccccccceeecCCCCCeEEEEEEecCCc-ccccccCcHHHcCCCCcccCCCccHHHHHHHHHhcccCcchhH
Confidence 799999999999999999988889999999999995 864 699999999889999999999999999999988 89999
Q ss_pred cccccc
Q 037834 82 DKLKLA 87 (91)
Q Consensus 82 ~~~~~~ 87 (91)
+..+|+
T Consensus 354 ~~~~~~ 359 (360)
T PLN03178 354 DAADIS 359 (360)
T ss_pred hHHhcc
Confidence 998886
No 8
>PLN02365 2-oxoglutarate-dependent dioxygenase
Probab=99.91 E-value=8e-25 Score=158.47 Aligned_cols=82 Identities=21% Similarity=0.237 Sum_probs=75.1
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
|||+||||+|||+.|||++++..+|||||||+.|+. |++|+|+++|+++++|++|++++++||+..+..+.. +...++
T Consensus 216 ~l~~~TNG~~~St~HRVv~~~~~~R~Si~~F~~p~~-d~~i~p~~~~v~~~~p~~y~~~~~~e~~~~~~~~~~~~~~~~~ 294 (300)
T PLN02365 216 VATAWSNGRLCNVKHRVQCKEATMRISIASFLLGPK-DDDVEAPPEFVDAEHPRLYKPFTYEDYRKLRLSTKLHAGEALA 294 (300)
T ss_pred HHHHHhCCceecccceeEcCCCCCEEEEEEEecCCC-CCeEeCCHHHcCCCCCccCCCccHHHHHHHHHhccccccchHh
Confidence 799999999999999999988889999999999995 999999999999889999999999999999998887 667777
Q ss_pred cccc
Q 037834 83 KLKL 86 (91)
Q Consensus 83 ~~~~ 86 (91)
++..
T Consensus 295 ~~~~ 298 (300)
T PLN02365 295 LITA 298 (300)
T ss_pred hhhc
Confidence 6654
No 9
>PLN02254 gibberellin 3-beta-dioxygenase
Probab=99.91 E-value=7.6e-25 Score=162.04 Aligned_cols=81 Identities=26% Similarity=0.500 Sum_probs=72.5
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccCCcchhcc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNNELSALDK 83 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~~~~~l~~ 83 (91)
+||+||||+|||+.|||++++.++|||||||++|+ .|+.|+|+++|+++++|++|++++++||+..+++.... .++.
T Consensus 275 ~lq~~SNg~~kS~~HRVv~~~~~~R~Sia~F~~P~-~d~~i~pl~~lv~~~~p~~Y~~~t~~ey~~~~~~~~~~--~~~~ 351 (358)
T PLN02254 275 LLHILSNGRFPSVLHRAVVNKTRHRISVAYFYGPP-SDVQISPLPKLVDPNHPPLYRSVTWKEYLATKAKHFNK--ALSL 351 (358)
T ss_pred HHHHHhCCeeccccceeecCCCCCEEEEEEEecCC-CCcEEeCcHHhcCCCCCcccCCcCHHHHHHHHHHhhhh--hhhh
Confidence 79999999999999999999889999999999999 59999999999999999999999999999988766433 5566
Q ss_pred cccc
Q 037834 84 LKLA 87 (91)
Q Consensus 84 ~~~~ 87 (91)
+++.
T Consensus 352 ~~~~ 355 (358)
T PLN02254 352 IRNC 355 (358)
T ss_pred hhcc
Confidence 6654
No 10
>PLN03001 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.91 E-value=1.1e-24 Score=155.49 Aligned_cols=80 Identities=28% Similarity=0.394 Sum_probs=73.0
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
+||+||||+|+|+.|||+++..++|||||||++|+ .|++|+|+++|+++++|++|++++++||+..++++.. ++..++
T Consensus 180 ~l~~~tng~~~S~~HRVv~~~~~~R~Sia~F~~p~-~d~~i~p~~e~v~~~~p~~y~~~~~~e~l~~~~~~~~~~~~~~~ 258 (262)
T PLN03001 180 QTEIITNGNYKSAQHRAIANANKARLSVATFHDPA-KTAKIAPASALSTESFPPRYCEIVYGEYVSSWYSKGPEGKRNID 258 (262)
T ss_pred HHHHHhCCccccccceEEcCCCCCEEEEEEEEcCC-CCCEEeCChHhcCCCCCCcCCCccHHHHHHHHHHhccCCcchhh
Confidence 79999999999999999999889999999999999 4999999999999989999999999999999888766 666665
Q ss_pred cc
Q 037834 83 KL 84 (91)
Q Consensus 83 ~~ 84 (91)
.+
T Consensus 259 ~~ 260 (262)
T PLN03001 259 AL 260 (262)
T ss_pred hh
Confidence 54
No 11
>PLN02276 gibberellin 20-oxidase
Probab=99.91 E-value=7e-25 Score=162.22 Aligned_cols=83 Identities=22% Similarity=0.377 Sum_probs=76.6
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
|||+||||+|||++|||++++.++|||+|||++|+. |+.|+|+++|+++++|++|++++++||++.+.++.. ++..++
T Consensus 270 ~L~~~TNG~~kSt~HRVv~~~~~~R~Sia~F~~P~~-d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~l~ 348 (361)
T PLN02276 270 TFMALSNGRYKSCLHRAVVNSERERRSLAFFLCPKE-DKVVRPPQELVDREGPRKYPDFTWSDLLEFTQKHYRADMNTLQ 348 (361)
T ss_pred HHHHHhCCccccccceeecCCCCCEEEEEEEecCCC-CCEEeCChHhcCCCCCCcCCCCCHHHHHHHHHHhcccchhHHH
Confidence 799999999999999999998899999999999995 999999999999999999999999999998888877 777788
Q ss_pred ccccc
Q 037834 83 KLKLA 87 (91)
Q Consensus 83 ~~~~~ 87 (91)
.+++.
T Consensus 349 ~~~~~ 353 (361)
T PLN02276 349 AFSNW 353 (361)
T ss_pred HHHHH
Confidence 77744
No 12
>PLN02393 leucoanthocyanidin dioxygenase like protein
Probab=99.91 E-value=9.1e-25 Score=161.67 Aligned_cols=82 Identities=28% Similarity=0.425 Sum_probs=75.8
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
+||+||||+|||++|||++++.++|||+|||++|+ .|++|+|+++|+++++|++|++++++||+..+.++.. ++..++
T Consensus 278 ~l~~~Tng~~kSt~HRVv~~~~~~R~SiafF~~P~-~d~~i~pl~~~v~~~~p~~y~~~~~~ey~~~~~~~~~~~~~~~~ 356 (362)
T PLN02393 278 QIQVLSNAIYKSVEHRVIVNSAKERVSLAFFYNPK-SDLPIEPLKELVTPDRPALYPPMTFDEYRLFIRTKGPRGKSQVE 356 (362)
T ss_pred hhHhhcCCeeeccceecccCCCCCEEEEEEEecCC-CCceEeCcHHhcCCCCCCCCCCccHHHHHHHHHhcccCcchHHh
Confidence 79999999999999999999889999999999999 4999999999999999999999999999988887776 777787
Q ss_pred cccc
Q 037834 83 KLKL 86 (91)
Q Consensus 83 ~~~~ 86 (91)
.+|+
T Consensus 357 ~~~~ 360 (362)
T PLN02393 357 SLKS 360 (362)
T ss_pred hhcc
Confidence 7775
No 13
>PLN02299 1-aminocyclopropane-1-carboxylate oxidase
Probab=99.91 E-value=2.1e-24 Score=157.66 Aligned_cols=83 Identities=24% Similarity=0.404 Sum_probs=75.6
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCC--CCCCCCcccHHHHHHHHHHccC-Cc-c
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEV--NPPLYPEITLKDIYNNQSLKNN-EL-S 79 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~--~p~~y~~~~~~ey~~~~~~~~~-~~-~ 79 (91)
+||+||||+|||+.|||+++..++|||+|||++|+ .|++|+|+++|++++ +|++|++++++||+..+.++.. ++ .
T Consensus 223 ~l~~~Tng~~kS~~HRVv~~~~~~R~Si~~F~~p~-~d~~i~pl~~~v~~~~~~p~~y~p~~~~e~l~~~~~~~~~~~~~ 301 (321)
T PLN02299 223 QLEVITNGKYKSVMHRVVAQTDGNRMSIASFYNPG-SDAVIYPAPALVEKEAEEEQVYPKFVFEDYMKLYAGLKFQAKEP 301 (321)
T ss_pred HHHHHhCCceecccceeecCCCCCEEEEEEEecCC-CCceEeCchHhcCcccCCCcCCCCCcHHHHHHHHHHcccCCccc
Confidence 79999999999999999999888999999999999 599999999999765 5899999999999999998877 54 7
Q ss_pred hhcccccc
Q 037834 80 ALDKLKLA 87 (91)
Q Consensus 80 ~l~~~~~~ 87 (91)
.++.+++.
T Consensus 302 ~~~~~~~~ 309 (321)
T PLN02299 302 RFEAMKAM 309 (321)
T ss_pred hhhhhhcc
Confidence 78888875
No 14
>PLN02704 flavonol synthase
Probab=99.90 E-value=5.3e-24 Score=156.11 Aligned_cols=69 Identities=29% Similarity=0.446 Sum_probs=65.9
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHH
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSL 73 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~ 73 (91)
+||+||||+|||+.|||+++...+|||||||++|+ .|+.|+|+++|+++++|++|++++++||+..+++
T Consensus 263 ~L~~~TNg~~kSt~HRVv~~~~~~R~Si~~F~~p~-~d~~i~pl~~~~~~~~p~~Y~~~~~~e~~~~~~~ 331 (335)
T PLN02704 263 QIEILSNGKYKSVLHRTTVNKEKTRMSWPVFLEPP-SELAVGPLPKLINEDNPPKFKTKKFKDYVYCKLN 331 (335)
T ss_pred HHHHHhCCeeecccceeecCCCCCeEEEEEEecCC-CCceEeCChHhcCCCCCccCCCCCHHHHHHHHHh
Confidence 79999999999999999999889999999999999 4999999999999999999999999999988876
No 15
>PLN02156 gibberellin 2-beta-dioxygenase
Probab=99.90 E-value=7.8e-24 Score=155.55 Aligned_cols=72 Identities=29% Similarity=0.336 Sum_probs=68.7
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~ 76 (91)
|||+||||+|||+.|||++++.++|||||||++|+. |+.|+|+++|+++++|++|++++++||+..+..+.+
T Consensus 245 ~l~~wTNg~~kSt~HRVv~~~~~~R~SiafF~~P~~-d~~i~pl~~~v~~~~p~~y~p~~~~ey~~~~~~~~~ 316 (335)
T PLN02156 245 TLQVMTNGRFKSVKHRVVTNTKRSRISMIYFAGPPL-SEKIAPLSCLVPKQDDCLYNEFTWSQYKLSAYKTKL 316 (335)
T ss_pred HHHHHhCCeeeccceeeecCCCCCEEEEEEeecCCC-CCEEeCChHhcCCCCCccCCCccHHHHHHHHHhccC
Confidence 799999999999999999998889999999999995 999999999999999999999999999999998866
No 16
>PLN02750 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.89 E-value=1.1e-23 Score=154.90 Aligned_cols=72 Identities=33% Similarity=0.505 Sum_probs=68.0
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~ 76 (91)
+||+||||+|+|++|||++++.++||||+||++|+. |++|+|+++|+++++|++|++++++||+..++...+
T Consensus 259 ~L~~~Tng~~~St~HRVv~~~~~~R~Si~~F~~P~~-d~~i~pl~~~v~~~~p~~y~p~~~~e~~~~~~~~~~ 330 (345)
T PLN02750 259 CMQVWTNDLYWSAEHRVVVNSQKERFSIPFFFFPSH-YVNIKPLDELINEQNPPKYKEFNWGKFFASRNRSDY 330 (345)
T ss_pred HHHHHhCCeeecccceeccCCCCCEEEEEEeecCCC-CCeecCcHHhcCCCCCCccCCccHHHHHHHHHhccc
Confidence 799999999999999999998899999999999995 999999999999999999999999999998887755
No 17
>PLN02997 flavonol synthase
Probab=99.89 E-value=1.6e-23 Score=153.33 Aligned_cols=70 Identities=27% Similarity=0.433 Sum_probs=66.0
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLK 74 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~ 74 (91)
|||+||||+|||+.|||+++++.+|||+|||++|+. |+.|+|+++|+++++|++|++++++||+..+++.
T Consensus 247 ~Le~~TNG~~kSt~HRVv~~~~~~R~Si~fF~~P~~-d~~i~Plp~~v~~~~p~~y~~~~~~e~l~~r~~~ 316 (325)
T PLN02997 247 QLMRMTNGRFKNVLHRAKTDKERLRISWPVFVAPRA-DMSVGPLPELTGDENPPKFETLIYNDYIDQKIRG 316 (325)
T ss_pred HHHHHhCCccccccceeeCCCCCCEEEEEEEecCCC-CCeEeCChHHcCCCCCCcCCCccHHHHHHHHHhh
Confidence 799999999999999999988889999999999995 9999999999999999999999999999888763
No 18
>PLN03002 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.89 E-value=2.8e-23 Score=152.22 Aligned_cols=71 Identities=27% Similarity=0.292 Sum_probs=66.5
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~ 76 (91)
+||+||||+|||+.|||+++. .+|||||||++|+. |++|+|+++|+++++|++|++++++||+..++...+
T Consensus 252 ~L~~wTng~~kSt~HRVv~~~-~~R~Sia~F~~p~~-d~~i~pl~~~~~~~~p~~y~~~~~~e~l~~~~~~~~ 322 (332)
T PLN03002 252 MLERWSNGFFKSTLHRVLGNG-QERYSIPFFVEPNH-DCLVECLPTCKSESDLPKYPPIKCSTYLTQRYEETH 322 (332)
T ss_pred HHHHHhCCeeECcCCeecCCC-CCeeEEEEEecCCC-CeeEecCCcccCCCCcccCCCccHHHHHHHHHHHHh
Confidence 799999999999999999775 68999999999995 999999999999999999999999999999988766
No 19
>KOG0143 consensus Iron/ascorbate family oxidoreductases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=99.89 E-value=2.5e-23 Score=152.26 Aligned_cols=78 Identities=32% Similarity=0.474 Sum_probs=71.1
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
+||+||||+|||++|||++|.+++|+|+|+|+.|+. |.+|.|+++++.++ |++|+++++.+|+..+..+.. ++..++
T Consensus 242 ~l~~lSNG~ykSv~HRV~~n~~~~R~Sia~F~~p~~-d~~i~p~~elv~~~-~~~Y~~~~~~~y~~~~~~~~~~~~~~~~ 319 (322)
T KOG0143|consen 242 MLQILSNGRYKSVLHRVVVNGEKERISVAFFVFPPL-DKVIGPPEELVDEE-PPKYKPFTFGDYLEFYFSKKLQGKTLLD 319 (322)
T ss_pred HHhHhhCCcccceEEEEEeCCCCceEEEEEEecCCC-CceecChhhhCCCC-CCccCcEEHHHHHHHHHhccccCcchhh
Confidence 799999999999999999999999999999999994 99999999999877 888999999999999998887 655554
Q ss_pred c
Q 037834 83 K 83 (91)
Q Consensus 83 ~ 83 (91)
.
T Consensus 320 ~ 320 (322)
T KOG0143|consen 320 Y 320 (322)
T ss_pred h
Confidence 4
No 20
>PLN02485 oxidoreductase
Probab=99.88 E-value=4.5e-23 Score=150.67 Aligned_cols=72 Identities=17% Similarity=0.312 Sum_probs=66.5
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccC--CCCCCCCCcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLS--EVNPPLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~--~~~p~~y~~~~~~ey~~~~~~~~~ 76 (91)
|||+||||+|+|++|||++++.++|||++||++|+. |++|+|+++|++ +++|++|++++++||+..++.+.+
T Consensus 254 ~L~~~TnG~~~St~HRVv~~~~~~R~Si~~F~~p~~-d~~i~pl~~~~~~~~~~~~~y~~~t~~e~~~~~~~~~~ 327 (329)
T PLN02485 254 MLKIWSNGVYQSTLHRVINNSPKYRVCVAFFYETNF-DAAVEPLDICKEKRTGGSQVFKRVVYGEHLVNKVLTNF 327 (329)
T ss_pred HHHHHHCCEeeCCCceecCCCCCCeEEEEEEecCCC-CceeecchhhcccccCCCCCCCcEeHHHHHHHHHHHhh
Confidence 799999999999999999988889999999999995 999999999987 677899999999999999887653
No 21
>PLN02515 naringenin,2-oxoglutarate 3-dioxygenase
Probab=99.88 E-value=6.3e-23 Score=151.82 Aligned_cols=71 Identities=24% Similarity=0.357 Sum_probs=65.4
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~ 76 (91)
|||+||||+|||++|||++++.++||||+||++|+. |++|+|++ ++.+++|++|++++++||+..++.+.+
T Consensus 261 ~L~~~TNG~~kSt~HRVv~~~~~~R~Si~~F~~P~~-d~~i~Pl~-~~~~~~p~~y~~~t~~eyl~~~~~~~~ 331 (358)
T PLN02515 261 HGHYLSNGRFKNADHQAVVNSNCSRLSIATFQNPAP-DATVYPLK-VREGEKPILEEPITFAEMYRRKMSRDL 331 (358)
T ss_pred HHHHHhCCeeeeecceEECCCCCCEEEEEEEecCCC-CCEEECCC-cCCCCCCCcCCCcCHHHHHHHHHhccc
Confidence 799999999999999999998899999999999995 99999997 566678999999999999999987765
No 22
>PTZ00273 oxidase reductase; Provisional
Probab=99.87 E-value=1.1e-22 Score=148.04 Aligned_cols=71 Identities=24% Similarity=0.326 Sum_probs=65.8
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~ 76 (91)
+||+||||+|||++|||+.+ ..+|||++||++|+. |++|+|+++|+++++|++|++++++||+..++.+.+
T Consensus 243 ~l~~~TnG~~kSt~HRVv~~-~~~R~Si~~F~~p~~-d~~i~pl~~~~~~~~~~~y~~~~~~e~~~~~~~~~~ 313 (320)
T PTZ00273 243 MMEMWSNGRYRSTPHRVVNT-GVERYSMPFFCEPNP-NVIIKCLDNCHSEENPPKYPPVRAVDWLLKRFAETY 313 (320)
T ss_pred HHHHHHCCeeeCCCccccCC-CCCeEEEEEEEcCCC-CceEecCccccCCCCcccCCceeHHHHHHHHHHHHH
Confidence 79999999999999999854 578999999999995 999999999999999999999999999999987765
No 23
>PLN00417 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.86 E-value=3.4e-22 Score=147.42 Aligned_cols=76 Identities=25% Similarity=0.423 Sum_probs=63.8
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Ccchhc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-ELSALD 82 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~~~l~ 82 (91)
|||+||||+|+|++|||++++..+|||++||++|+ .|+.|+|+++|+++++|++|++++.+ +...++... ++..++
T Consensus 268 ~Le~~Tng~~kSt~HRVv~~~~~~R~Si~fF~~P~-~d~~i~pl~~~v~~~~p~~Y~~~~~~--~~~~~~~~~~~~~~~~ 344 (348)
T PLN00417 268 QMEIMSNGIYKSPVHRVVTNREKERISVATFCIPG-ADKEIQPVDGLVSEARPRLYKTVKKY--VELFFKYYQQGRRPIE 344 (348)
T ss_pred HHHHHhCCeecccceEEecCCCCCEEEEEEEecCC-CCceecCchHhcCCCCCCCCCCHHHH--HHHHHHHHhcCcchhh
Confidence 79999999999999999998888999999999999 59999999999998899999999954 444443333 443344
No 24
>PLN02403 aminocyclopropanecarboxylate oxidase
Probab=99.85 E-value=1.4e-21 Score=141.98 Aligned_cols=79 Identities=24% Similarity=0.442 Sum_probs=69.1
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCC-cccHHHHHHHHHHccC--Ccch
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYP-EITLKDIYNNQSLKNN--ELSA 80 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~-~~~~~ey~~~~~~~~~--~~~~ 80 (91)
+||+||||+|||+.|||+++..++|||++||++|+. |++|.|+++++. + +++++||++.+.+... ++..
T Consensus 219 ~L~~~Tng~~~S~~HRVv~~~~~~R~Si~~F~~p~~-d~~i~pl~~~~~-------~~~~~~~eyl~~~~~~~~~~~~~~ 290 (303)
T PLN02403 219 QLEVLSNGRYKSTLHRVMADKNGSRLSIATFYNPAG-DAIISPAPKLLY-------PSNYRFQDYLKLYSTTKFGDKGPR 290 (303)
T ss_pred HHHHHhCCeeecccceeecCCCCCEEEEEEEEcCCC-CCeEeCchhhCC-------CCCccHHHHHHHHHHhccccccch
Confidence 799999999999999999998889999999999994 999999998763 3 4999999999887554 6778
Q ss_pred hccccccCCC
Q 037834 81 LDKLKLASHS 90 (91)
Q Consensus 81 l~~~~~~~~~ 90 (91)
++.+++.+.+
T Consensus 291 ~~~~~~~~~~ 300 (303)
T PLN02403 291 FESMKKMANG 300 (303)
T ss_pred HHHhhhhhcc
Confidence 9999887543
No 25
>PLN02984 oxidoreductase, 2OG-Fe(II) oxygenase family protein
Probab=99.79 E-value=1.2e-19 Score=133.73 Aligned_cols=73 Identities=27% Similarity=0.348 Sum_probs=62.1
Q ss_pred hhhHHhCCeeecccceee-cCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC---Ccc
Q 037834 4 FMQLITNDKFKSAYHRVL-SNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN---ELS 79 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv-~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~---~~~ 79 (91)
|||+||||+|||+.|||+ .+..++|||+|||++|+. |+.|+| ++|++++++||+..++.... .+.
T Consensus 264 ~Le~wTNg~~kSt~HRVv~~~~~~~R~Sia~F~~P~~-d~~i~p----------~~y~p~t~~e~l~~~~~~~~~~~~~~ 332 (341)
T PLN02984 264 MMQVISDDEYKSVLHRVGKRNKKKERYSICYFVFPEE-DCVIKS----------SKYKPFTYSDFEAQVQLDVKTLGSKV 332 (341)
T ss_pred hhhhhcCCeeeCCCCccccCCCCCCeEEEEEEecCCC-CCEEcc----------CCcCcccHHHHHHHHHhhhhccCCcc
Confidence 799999999999999996 466789999999999994 999874 68999999999998886544 234
Q ss_pred hhcccccc
Q 037834 80 ALDKLKLA 87 (91)
Q Consensus 80 ~l~~~~~~ 87 (91)
.|+.+|+.
T Consensus 333 ~~~~~~~~ 340 (341)
T PLN02984 333 GLSRFKSN 340 (341)
T ss_pred cccceecC
Confidence 58888874
No 26
>COG3491 PcbC Isopenicillin N synthase and related dioxygenases [General function prediction only]
Probab=99.69 E-value=2e-17 Score=120.15 Aligned_cols=62 Identities=23% Similarity=0.254 Sum_probs=52.1
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCcc-ccCCCCCCCCCcccHHH
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKE-LLSEVNPPLYPEITLKD 66 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~-~~~~~~p~~y~~~~~~e 66 (91)
|||+||||+|+||.|||++|+..+|||||||+.|+. |+.|.|+.. +.+.+.++++.+-...+
T Consensus 239 mLe~~Tng~lrST~HRV~~~~~~~R~SipfF~~p~~-Da~I~Pl~~l~~~~a~~~~~~~t~~~n 301 (322)
T COG3491 239 MLERWTNGRLRSTVHRVRNPPGVDRYSIPFFLEPNF-DAEIAPLLPLCPEAANEPRGPGTDPDN 301 (322)
T ss_pred HHHHHhCCeeccccceeecCCCccceeeeeeccCCC-CccccccCCCCcccccCCcCCCCCCCc
Confidence 899999999999999999999889999999999995 999998764 44556677777653333
No 27
>PF03171 2OG-FeII_Oxy: 2OG-Fe(II) oxygenase superfamily Entry for Lysyl hydrolases This Prosite entry is a sub-family of the Pfam entry; InterPro: IPR005123 This domain is found in members of the 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily [], as well as the C-terminal of prolyl 4-hydroxylase alpha subunit. The holoenzyme has the activity (1.14.11.2 from EC) catalysing the reaction: Procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-4-hydroxy-L-proline + succinate + CO2. The full enzyme consists of a alpha2 beta2 complex with the alpha subunit contributing most of the parts of the active site []. The family also includes lysyl hydrolases, isopenicillin synthases and AlkB. ; GO: 0016491 oxidoreductase activity, 0016706 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, 0055114 oxidation-reduction process; PDB: 3ON7_D 1BK0_A 1IPS_B 1QIQ_A 1OC1_A 2Y86_A 2Y60_A 1W03_A 2VE1_A 1QJF_A ....
Probab=99.00 E-value=2.8e-10 Score=69.50 Aligned_cols=34 Identities=26% Similarity=0.526 Sum_probs=24.8
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeecc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMN 37 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P 37 (91)
+|++||||.++++.|||..+....|+|+++|++|
T Consensus 65 ~l~~~t~g~~~~~~HrV~~~~~~~R~s~~~f~~p 98 (98)
T PF03171_consen 65 ALEILTNGRYPATLHRVVPPTEGERYSLTFFLRP 98 (98)
T ss_dssp HHHHHTTTSS----EEEE--STS-EEEEEEEEE-
T ss_pred eeecccCCccCCceeeeEcCCCCCEEEEEEEECC
Confidence 5899999999999999999988999999999998
No 28
>PF13759 2OG-FeII_Oxy_5: Putative 2OG-Fe(II) oxygenase; PDB: 3BVC_B 2RG4_A.
Probab=70.78 E-value=3.1 Score=25.17 Aligned_cols=18 Identities=39% Similarity=0.530 Sum_probs=10.4
Q ss_pred ccceeecCC-CCCceEEEe
Q 037834 16 AYHRVLSNK-EGSRISIGS 33 (91)
Q Consensus 16 ~~HRVv~~~-~~~R~Sia~ 33 (91)
..|+|..+. +.+|+||+|
T Consensus 82 l~H~v~p~~~~~~Risisf 100 (101)
T PF13759_consen 82 LWHGVPPNNSDEERISISF 100 (101)
T ss_dssp SEEEE----SSS-EEEEEE
T ss_pred CEEeccCcCCCCCEEEEEc
Confidence 468888764 469999997
No 29
>PF13640 2OG-FeII_Oxy_3: 2OG-Fe(II) oxygenase superfamily; PDB: 3DKQ_B 3GZE_D 3HQR_A 2Y34_A 2G1M_A 2G19_A 3OUI_A 3OUJ_A 2HBU_A 2Y33_A ....
Probab=63.88 E-value=4 Score=24.18 Aligned_cols=22 Identities=27% Similarity=0.339 Sum_probs=17.3
Q ss_pred cccceeecC-CCCCceEEEeeec
Q 037834 15 SAYHRVLSN-KEGSRISIGSVFM 36 (91)
Q Consensus 15 S~~HRVv~~-~~~~R~Sia~F~~ 36 (91)
...|+|... ....|+++..|++
T Consensus 78 ~~~H~v~~v~~~~~R~~l~~~~~ 100 (100)
T PF13640_consen 78 NSLHGVTPVGEGGRRYSLTFWFH 100 (100)
T ss_dssp TCEEEEEEE-EESEEEEEEEEEE
T ss_pred CCeecCcccCCCCCEEEEEEEEC
Confidence 478998876 6778999988864
No 30
>TIGR02466 conserved hypothetical protein. This family consists of uncharacterized proteins in Caulobacter crescentus CB15, Bdellovibrio bacteriovorus HD100, Synechococcus sp. WH 8102 (2), Silicibacter pomeroyi DSS-3 (2), and Hyphomonas neptunium ATCC 15444. The context of nearby genes differs substantially between members and does point to any specific biological role.
Probab=59.88 E-value=6.9 Score=27.16 Aligned_cols=20 Identities=35% Similarity=0.458 Sum_probs=15.2
Q ss_pred ccceeecCC-CCCceEEEeee
Q 037834 16 AYHRVLSNK-EGSRISIGSVF 35 (91)
Q Consensus 16 ~~HRVv~~~-~~~R~Sia~F~ 35 (91)
-.|+|..+. +.+|+||+|=+
T Consensus 178 L~H~v~p~~~~~~RISiSFNl 198 (201)
T TIGR02466 178 LRHEVPPNESEEERISVSFNY 198 (201)
T ss_pred CceecCCCCCCCCEEEEEEee
Confidence 368887764 57999999854
No 31
>COG3615 TehB Uncharacterized protein/domain, possibly involved in tellurite resistance [Inorganic ion transport and metabolism]
Probab=53.04 E-value=14 Score=23.08 Aligned_cols=23 Identities=17% Similarity=0.303 Sum_probs=20.2
Q ss_pred ccceeecCCCCCceEEEeeeccC
Q 037834 16 AYHRVLSNKEGSRISIGSVFMNN 38 (91)
Q Consensus 16 ~~HRVv~~~~~~R~Sia~F~~P~ 38 (91)
..|||-..++..++-+.|||.|.
T Consensus 77 ~WHrVea~tDD~e~~l~Fyc~~e 99 (99)
T COG3615 77 AWHRVEAMTDDAEFNLSFYCAPE 99 (99)
T ss_pred HeeeeeecccccEEEEEEEEcCC
Confidence 57999988899999999999873
No 32
>PF12851 Tet_JBP: Oxygenase domain of the 2OGFeDO superfamily ; InterPro: IPR024779 TETs are 2OG- and Fe(II)-dependent oxygenases that catalyse the conversion of 5 methyl-Cytosine (5-MC) to 5-hydroxymethyl-cytosine (hmC) in cultured cells and in vitro []. Interestingly TET2 is considered as an oncogene, as it is found mutated in some types of cancer []. This entry represents the double-stranded beta helix (DSBH) fold of the 2-oxoglutarate (2OG) - Fe(II) oxygenases. DSBH comprises a part of the catalytic domain in TETS. It is found in many organisms including fruit fly, African malaria mosquito, zebrafish, mouse and human.
Probab=45.89 E-value=16 Score=24.60 Aligned_cols=11 Identities=36% Similarity=0.326 Sum_probs=9.8
Q ss_pred CCceEEEeeec
Q 037834 26 GSRISIGSVFM 36 (91)
Q Consensus 26 ~~R~Sia~F~~ 36 (91)
.+|+|++||++
T Consensus 160 ~~R~slvfy~h 170 (171)
T PF12851_consen 160 GTRISLVFYQH 170 (171)
T ss_pred CeEEEEEEEeE
Confidence 68999999985
No 33
>PF14549 P22_Cro: DNA-binding transcriptional regulator Cro; PDB: 1RZS_A 3BD1_A 3QWS_A 2HIN_B.
Probab=37.09 E-value=18 Score=20.38 Aligned_cols=13 Identities=31% Similarity=0.414 Sum_probs=9.7
Q ss_pred hhhhHHhCCeeec
Q 037834 3 VFMQLITNDKFKS 15 (91)
Q Consensus 3 ~~l~~~TNG~~kS 15 (91)
+.+|.+|||.+++
T Consensus 39 ~~Ie~~T~G~l~~ 51 (60)
T PF14549_consen 39 YQIEKLTNGKLKC 51 (60)
T ss_dssp HHHHHHTTTSS--
T ss_pred HHHHHHhCCceee
Confidence 5689999999884
No 34
>COG2879 Uncharacterized small protein [Function unknown]
Probab=35.05 E-value=49 Score=19.07 Aligned_cols=20 Identities=15% Similarity=0.287 Sum_probs=17.3
Q ss_pred CCCCcccHHHHHHHHHHccC
Q 037834 57 PLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 57 ~~y~~~~~~ey~~~~~~~~~ 76 (91)
|.-+++|++||.+.+....+
T Consensus 37 Pd~p~mT~~EFfrec~daRy 56 (65)
T COG2879 37 PDKPPMTYEEFFRECQDARY 56 (65)
T ss_pred cCCCcccHHHHHHHHHHhhc
Confidence 34579999999999999888
No 35
>PRK09744 DNA-binding transcriptional regulator DicC; Provisional
Probab=31.37 E-value=29 Score=20.61 Aligned_cols=12 Identities=8% Similarity=0.196 Sum_probs=9.8
Q ss_pred hhhhHHhCCeee
Q 037834 3 VFMQLITNDKFK 14 (91)
Q Consensus 3 ~~l~~~TNG~~k 14 (91)
+.+|.+|||.+|
T Consensus 40 ~~ie~~T~G~LK 51 (75)
T PRK09744 40 MRLQEASGGELQ 51 (75)
T ss_pred HHHHHHhCCcee
Confidence 567888888887
No 36
>TIGR00589 ogt O-6-methylguanine DNA methyltransferase. All proteins in this family for which functions are known are involved alkyl-DNA transferases which remove alkyl groups from DNA as part of alkylation DNA repair. Some of the proteins in this family are also transcription regulators and have a distinct transcription regulatory domain. This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).
Probab=23.94 E-value=50 Score=19.45 Aligned_cols=10 Identities=30% Similarity=0.597 Sum_probs=7.8
Q ss_pred ccceeecCCC
Q 037834 16 AYHRVLSNKE 25 (91)
Q Consensus 16 ~~HRVv~~~~ 25 (91)
.+|||+....
T Consensus 52 PcHRVv~s~G 61 (80)
T TIGR00589 52 PCHRVIGKNG 61 (80)
T ss_pred CCceeECCCC
Confidence 5899998653
No 37
>KOG1653 consensus Single-stranded DNA-binding protein [Replication, recombination and repair]
Probab=22.34 E-value=22 Score=24.31 Aligned_cols=14 Identities=21% Similarity=0.275 Sum_probs=10.5
Q ss_pred hhhhHHhCCeeecc
Q 037834 3 VFMQLITNDKFKSA 16 (91)
Q Consensus 3 ~~l~~~TNG~~kS~ 16 (91)
.++.+-|||.|++-
T Consensus 80 tiFsv~T~~~~k~r 93 (175)
T KOG1653|consen 80 TIFSVGTGGMFKQR 93 (175)
T ss_pred EEEEeecCcccccc
Confidence 45667899999954
No 38
>PF11990 DUF3487: Protein of unknown function (DUF3487); InterPro: IPR021877 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 121 to 136 amino acids in length. This protein has a conserved RLN sequence motif.
Probab=21.80 E-value=66 Score=20.58 Aligned_cols=28 Identities=11% Similarity=0.195 Sum_probs=19.4
Q ss_pred cEeecCccccCCCCCCCCCcccHHHHHHH
Q 037834 42 RRYGPIKELLSEVNPPLYPEITLKDIYNN 70 (91)
Q Consensus 42 ~~i~pl~~~~~~~~p~~y~~~~~~ey~~~ 70 (91)
..|+=+|+-+++ +|+.|+.+|..|..-.
T Consensus 2 ~ti~fLp~RLN~-ePvV~rGlT~~El~~~ 29 (121)
T PF11990_consen 2 GTIEFLPDRLNR-EPVVFRGLTADELGLA 29 (121)
T ss_pred CccccchhhhcC-CCCeecCCCHHHHHHH
Confidence 344555665544 5889999999997543
Done!