Query 037834
Match_columns 91
No_of_seqs 129 out of 1019
Neff 7.3
Searched_HMMs 29240
Date Mon Mar 25 07:37:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037834.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037834hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1w9y_A 1-aminocyclopropane-1-c 99.9 1.3E-25 4.5E-30 162.5 5.2 83 4-87 220-307 (319)
2 1gp6_A Leucoanthocyanidin diox 99.9 2.4E-24 8.4E-29 157.7 6.6 74 4-78 274-349 (356)
3 3oox_A Putative 2OG-Fe(II) oxy 99.9 1.2E-23 4.2E-28 151.4 6.9 70 4-74 234-308 (312)
4 1odm_A Isopenicillin N synthas 99.9 3.3E-22 1.1E-26 145.0 7.3 70 4-76 256-325 (331)
5 1dcs_A Deacetoxycephalosporin 99.9 1.1E-22 3.6E-27 146.6 2.3 71 4-76 229-306 (311)
6 3on7_A Oxidoreductase, iron/as 99.7 6.4E-18 2.2E-22 120.2 5.1 56 4-74 217-276 (280)
7 2rg4_A Uncharacterized protein 73.6 2.2 7.6E-05 28.6 2.6 23 16-38 185-208 (216)
8 2vf9_A Coat protein; virion, R 62.9 2.6 8.8E-05 25.6 1.0 18 5-22 49-66 (131)
9 3dl3_A Tellurite resistance pr 42.5 15 0.00051 22.7 2.1 22 16-38 80-101 (119)
10 3plx_A Aspartate 1-decarboxyla 30.4 18 0.00062 16.6 0.8 12 12-23 8-19 (27)
11 1vc3_A L-aspartate-alpha-decar 29.2 20 0.00067 16.3 0.8 13 12-24 5-17 (26)
12 1uhe_B Aspartate 1-decarboxyla 29.0 20 0.00068 16.3 0.8 13 12-24 5-17 (26)
13 2hbt_A EGL nine homolog 1; pro 27.0 45 0.0016 22.5 2.7 21 16-37 193-213 (247)
14 3bb6_A Uncharacterized protein 26.1 40 0.0014 21.0 2.1 24 15-38 80-103 (127)
No 1
>1w9y_A 1-aminocyclopropane-1-carboxylate oxidase 1; oxygenase, 2OG oxygenase, ACCO, ACC oxidase; 2.1A {Petunia hybrida} SCOP: b.82.2.1 PDB: 1wa6_X
Probab=99.91 E-value=1.3e-25 Score=162.52 Aligned_cols=83 Identities=27% Similarity=0.436 Sum_probs=71.9
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCC---CCCCCCcccHHHHHHHHHHccC-Ccc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEV---NPPLYPEITLKDIYNNQSLKNN-ELS 79 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~---~p~~y~~~~~~ey~~~~~~~~~-~~~ 79 (91)
+||+||||+|||+.|||++++.++|+|+|||++|+. |+.|+|+++|++++ +|++|++++++||+..+++..+ ++.
T Consensus 220 ~l~~~SnG~~kS~~HRVv~~~~~~R~Sia~F~~p~~-d~~i~pl~~l~~~~~~~~p~~Y~~~t~~ey~~~~~~~~~~~~~ 298 (319)
T 1w9y_A 220 QLEVITNGKYKSVMHRVIAQKDGARMSLASFYNPGS-DAVIYPAPALVEKEAEENKQVYPKFVFDDYMKLYAGLKFQAKE 298 (319)
T ss_dssp HHHHHTTTSSCCCCEEECCCSSSCCEEEEEEEECCT-TCEECCCGGGC--------CCCCCEEHHHHHHTTTTTTCSSHH
T ss_pred HHHHHhCCeeecccceecCCCCCCceEEEEEecCCC-CCeEeCchhhcCcccccCccccCcEeHHHHHHHHHhhhcCcch
Confidence 799999999999999999999999999999999995 99999999999887 5999999999999999998888 775
Q ss_pred h-hcccccc
Q 037834 80 A-LDKLKLA 87 (91)
Q Consensus 80 ~-l~~~~~~ 87 (91)
. ++.+|+-
T Consensus 299 ~~~~~~~~~ 307 (319)
T 1w9y_A 299 PRFEAMKAM 307 (319)
T ss_dssp HHHHHHHHC
T ss_pred hHHHHHHHH
Confidence 4 7777764
No 2
>1gp6_A Leucoanthocyanidin dioxygenase; 2-oxoglutarate dependent dioxygenase, flavonoid biosynthesis; HET: MES QUE DH2; 1.75A {Arabidopsis thaliana} SCOP: b.82.2.1 PDB: 1gp5_A* 1gp4_A* 2brt_A*
Probab=99.90 E-value=2.4e-24 Score=157.67 Aligned_cols=74 Identities=27% Similarity=0.403 Sum_probs=69.6
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCc-EeecCccccCCCCCCCCCcccHHHHHHHHHHccC-Cc
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSR-RYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN-EL 78 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~-~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~-~~ 78 (91)
+||+||||+|||+.|||++++.++|||+|||++|+. |+ +|+|+++|+++++|++|++++++||+..++.+.+ |+
T Consensus 274 ~l~~~TnG~~kS~~HRVv~~~~~~R~Sia~F~~P~~-d~~~i~pl~~~~~~~~p~~y~~~t~~eyl~~~~~~~~d~~ 349 (356)
T 1gp6_A 274 TLEILSNGKYKSILHRGLVNKEKVRISWAVFCEPPK-DKIVLKPLPEMVSVESPAKFPPRTFAQHIEHKLFGKEQEE 349 (356)
T ss_dssp HHHHHTTTSSCCCCEEECCCSSCCEEEEEEEEECCT-TTCEECCCGGGCCSSSCCSSCCEEHHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCEeeccCceecCCCCCCEEEEEEeecCCC-CCcEEeCChhhcCCCCCccCCCccHHHHHHHHHHhccCcc
Confidence 799999999999999999998899999999999995 99 9999999999999999999999999999888776 54
No 3
>3oox_A Putative 2OG-Fe(II) oxygenase family protein; structural genomics, joint center for structural genomics; HET: MSE; 1.44A {Caulobacter crescentus CB15}
Probab=99.89 E-value=1.2e-23 Score=151.40 Aligned_cols=70 Identities=21% Similarity=0.310 Sum_probs=64.8
Q ss_pred hhhHHhCCeeecccceeecCC----CCCceEEEeeeccCCCCcEeecCccccCCCCCCCCC-cccHHHHHHHHHHc
Q 037834 4 FMQLITNDKFKSAYHRVLSNK----EGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYP-EITLKDIYNNQSLK 74 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~----~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~-~~~~~ey~~~~~~~ 74 (91)
+||+||||+|||+.|||++++ ..+|||+|||++|+. |++|+|+++|+++++|++|+ +++++||+..+++.
T Consensus 234 ~l~~~TnG~~kS~~HRVv~~~~~~~~~~R~Sia~F~~P~~-d~~i~pl~~~v~~~~p~~y~~~~t~~eyl~~r~~~ 308 (312)
T 3oox_A 234 MLERLTNNVLPSTVHRVVNPPPERRGVPRYSTPFFLHFAS-DYEIKTLQNCVTAENPDRYPESITADEFLQQRLRE 308 (312)
T ss_dssp HHHHHTTTSSCCCCEEECCCCGGGTTSCEEECCEEECCCT-TCEECCCGGGCCSSSCCSCSSCEEHHHHHHHHHHH
T ss_pred HHHHHhCCeecCCCceEeCCCccCCCCCEEEEEEEecCCC-CcEEecCccccCCCCcccCCCCeeHHHHHHHHHHH
Confidence 799999999999999998764 468999999999995 99999999999999999999 99999999998864
No 4
>1odm_A Isopenicillin N synthase; antibiotic biosynthesis, B-lactam antibiotic, oxygenase, penicillin biosynthesis, oxidoreductase, iron; HET: ASV; 1.15A {Emericella nidulans} SCOP: b.82.2.1 PDB: 1blz_A* 1hb1_A* 1hb2_A* 1hb3_A* 1hb4_A* 1ips_A 1obn_A* 1oc1_A* 1bk0_A* 1odn_A* 1qiq_A* 1qje_A* 1qjf_A* 1uzw_A* 1w03_A* 1w04_A* 1w05_A* 1w06_A* 1w3v_A* 1w3x_A* ...
Probab=99.86 E-value=3.3e-22 Score=145.05 Aligned_cols=70 Identities=17% Similarity=0.142 Sum_probs=64.5
Q ss_pred hhhHHhCCeeecccceeecCCCCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNKEGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~~~ 76 (91)
+||+||||+|||+.|||++ +.++|+|+|||++|+. |++|+|+++++++++ ++|++++++||+..+++..+
T Consensus 256 ~l~~~TnG~~kS~~HRVv~-~~~~R~Sia~F~~P~~-d~~i~pl~~~~~~~~-~~y~~~t~~e~l~~~~~~~~ 325 (331)
T 1odm_A 256 YMAHLTNNYYKAPIHRVKW-VNAERQSLPFFVNLGY-DSVIDPFDPREPNGK-SDREPLSYGDYLQNGLVSLI 325 (331)
T ss_dssp HHHHHTTTSSCCCCEEEEC-CCSCEEEEEEEECCCT-TCBCCCCCTTSTTCC-CSSCCCBHHHHHHHHHHHHH
T ss_pred HHHHHhCCEeeCCCceeCC-CCCCEEEEEEEEcCCC-CCEEeCCCccccccc-cCCCCccHHHHHHHHHHHHH
Confidence 7999999999999999986 4789999999999995 999999999998877 89999999999999887755
No 5
>1dcs_A Deacetoxycephalosporin C synthase; ferrous oxygenase, 2-oxoglutarate, oxidoreduc antibiotics, merohedral twinning; 1.30A {Streptomyces clavuligerus} SCOP: b.82.2.1 PDB: 1rxf_A 1rxg_A* 1unb_A* 1uo9_A 1uob_A* 1uof_A* 1uog_A* 2jb8_A 1w28_A 1w2a_X 1w2n_A* 1w2o_A* 1hjg_A 1hjf_A 1e5h_A 1e5i_A*
Probab=99.85 E-value=1.1e-22 Score=146.64 Aligned_cols=71 Identities=15% Similarity=0.109 Sum_probs=64.9
Q ss_pred hhhHHhCCeeecccceeecCC-----CCCceEEEeeeccCCCCcEeecCccccCCCCCCCC--CcccHHHHHHHHHHccC
Q 037834 4 FMQLITNDKFKSAYHRVLSNK-----EGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLY--PEITLKDIYNNQSLKNN 76 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~-----~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y--~~~~~~ey~~~~~~~~~ 76 (91)
+||+||||+|||+.|||++++ .++|||+|||++|+. |+.|+ +++|+++++|++| ++++++||+..+++..+
T Consensus 229 ~l~~~TnG~~kS~~HRVv~~~~~~~~~~~R~Si~~F~~p~~-d~~i~-l~~~~~~~~p~~y~~~~~t~~ey~~~~~~~~~ 306 (311)
T 1dcs_A 229 IATLVTGGQVKAPRHHVAAPRRDQIAGSSRTSSVFFLRPNA-DFTFS-VPLARECGFDVSLDGETATFQDWIGGNYVNIR 306 (311)
T ss_dssp HHHHHTTSCSCCCCEEECCC----CTTCCEEEEEEEECCCT-TCEEE-HHHHHHTTCCCCCCSSEEEHHHHHCSSCCCEE
T ss_pred HHHHHhCCcccCCCceEeCCCcccCCCCCeEEEEEEEcCCC-CcEEe-CCcccCCCCccccCCCCccHHHHHHHHHHHHh
Confidence 799999999999999999987 789999999999995 99999 9999988899999 99999999988776655
No 6
>3on7_A Oxidoreductase, iron/ascorbate family; structural genomics, joint center for structural genomics, J protein structure initiative; 2.20A {Shewanella oneidensis}
Probab=99.71 E-value=6.4e-18 Score=120.25 Aligned_cols=56 Identities=21% Similarity=0.237 Sum_probs=50.2
Q ss_pred hhhHHhCCeeecccceeecCC----CCCceEEEeeeccCCCCcEeecCccccCCCCCCCCCcccHHHHHHHHHHc
Q 037834 4 FMQLITNDKFKSAYHRVLSNK----EGSRISIGSVFMNNSCSRRYGPIKELLSEVNPPLYPEITLKDIYNNQSLK 74 (91)
Q Consensus 4 ~l~~~TNG~~kS~~HRVv~~~----~~~R~Sia~F~~P~~~d~~i~pl~~~~~~~~p~~y~~~~~~ey~~~~~~~ 74 (91)
+||+||||+|||+.|||++++ ..+|||+|||++|+. |++|+| ++|++||+..+++.
T Consensus 217 ~l~~~Tng~~kS~~HRVv~~~~~~~~~~R~Si~~F~~P~~-d~~i~p--------------~ita~~~l~~rl~~ 276 (280)
T 3on7_A 217 MLQEASDGYFPSTSHRVINPEGTDKTKSRISLPLFLHPHP-SVVLSE--------------RYTADSYLMERLRE 276 (280)
T ss_dssp HHHHHTTTSSCCCCEEEECCTTCCTTSCEEECCEEECCCT-TCBCSS--------------SCBHHHHHHHHHHH
T ss_pred HHHHHhCCcccCCCceEeCCCCCCCCCCeEEEEEEEcCCC-CCEECC--------------CccHHHHHHHHHHH
Confidence 799999999999999999874 468999999999995 999874 58999999998875
No 7
>2rg4_A Uncharacterized protein; rhodobacterales, oceanicola granulosus HTCC2516, Q2CBJ1_9RHO structural genomics, PSI-2; 1.90A {Oceanicola granulosus} PDB: 3bvc_A
Probab=73.62 E-value=2.2 Score=28.56 Aligned_cols=23 Identities=30% Similarity=0.283 Sum_probs=17.8
Q ss_pred ccceeecCC-CCCceEEEeeeccC
Q 037834 16 AYHRVLSNK-EGSRISIGSVFMNN 38 (91)
Q Consensus 16 ~~HRVv~~~-~~~R~Sia~F~~P~ 38 (91)
-.|.|..+. +.+|+||+|.+.|.
T Consensus 185 l~H~V~p~~~~~~RiSIsFN~~~~ 208 (216)
T 2rg4_A 185 LRHEVPMNMAEEDRISVSFNYAWG 208 (216)
T ss_dssp SCEEECCCCSSSCEEEEEEEEEC-
T ss_pred CEEeccCCCCCCCEEEEEEEeecC
Confidence 468888654 46999999999886
No 8
>2vf9_A Coat protein; virion, RNA-binding, capsid protein, structural protein, virus; 3.50A {Bacteriophage PRR1}
Probab=62.90 E-value=2.6 Score=25.61 Aligned_cols=18 Identities=22% Similarity=0.460 Sum_probs=13.7
Q ss_pred hhHHhCCeeecccceeec
Q 037834 5 MQLITNDKFKSAYHRVLS 22 (91)
Q Consensus 5 l~~~TNG~~kS~~HRVv~ 22 (91)
|..-|||+|||++.-|+.
T Consensus 49 lrktsngrykstlklvvp 66 (131)
T 2vf9_A 49 LRKTSNGRYKSTLKLVVP 66 (131)
T ss_dssp EEECTTSEEEEEEEEEEE
T ss_pred EEecCCCceeeeEEEEEE
Confidence 344589999999987653
No 9
>3dl3_A Tellurite resistance protein B; X-RAY NESG VFR98 Q5E3X2_VIBF1, structural genomics, PSI-2, protein structure initiative; 2.30A {Vibrio fischeri ES114} SCOP: b.82.2.13
Probab=42.49 E-value=15 Score=22.70 Aligned_cols=22 Identities=14% Similarity=0.205 Sum_probs=18.7
Q ss_pred ccceeecCCCCCceEEEeeeccC
Q 037834 16 AYHRVLSNKEGSRISIGSVFMNN 38 (91)
Q Consensus 16 ~~HRVv~~~~~~R~Sia~F~~P~ 38 (91)
..|||. .++.-|+-+-|++.|.
T Consensus 80 ~wHrVe-~sdD~~f~leFyc~~~ 101 (119)
T 3dl3_A 80 YWHRIE-LSDDAQFNINFWSDQD 101 (119)
T ss_dssp CEEEEE-ECTTCEEEEEEEECC-
T ss_pred ceEEEE-ECCCeEEEEEEEECch
Confidence 579999 7788999999999996
No 10
>3plx_A Aspartate 1-decarboxylase; structural genomics, center for structural genomics of infec diseases, csgid, double-PSI beta-barrel; 1.75A {Campylobacter jejuni subsp}
Probab=30.40 E-value=18 Score=16.61 Aligned_cols=12 Identities=33% Similarity=0.346 Sum_probs=9.9
Q ss_pred eeecccceeecC
Q 037834 12 KFKSAYHRVLSN 23 (91)
Q Consensus 12 ~~kS~~HRVv~~ 23 (91)
.+||=+||+.+.
T Consensus 8 ~LksKiHratVT 19 (27)
T 3plx_A 8 LLKSKIHRASVT 19 (27)
T ss_dssp EEEEEEEEEECC
T ss_pred HHHHhhhceEEe
Confidence 578899999875
No 11
>1vc3_A L-aspartate-alpha-decarboxylase light chain; tetramer, pyruvoyl group, riken structural genomics/proteomi initiative, RSGI; 1.50A {Thermus thermophilus} PDB: 2eeo_A
Probab=29.21 E-value=20 Score=16.34 Aligned_cols=13 Identities=23% Similarity=0.429 Sum_probs=10.0
Q ss_pred eeecccceeecCC
Q 037834 12 KFKSAYHRVLSNK 24 (91)
Q Consensus 12 ~~kS~~HRVv~~~ 24 (91)
.+||=+||+.+..
T Consensus 5 ~lksKiHratVT~ 17 (26)
T 1vc3_A 5 MFHAKIHRATVTQ 17 (26)
T ss_dssp EEEEEEEEEECCE
T ss_pred HhhhhhcceEEec
Confidence 4688899998753
No 12
>1uhe_B Aspartate 1-decarboxylase beta chain; double-PSI beta barrel, lyase; HET: NSN; 1.55A {Helicobacter pylori} SCOP: b.52.2.1 PDB: 1uhd_B*
Probab=29.03 E-value=20 Score=16.33 Aligned_cols=13 Identities=23% Similarity=0.215 Sum_probs=10.0
Q ss_pred eeecccceeecCC
Q 037834 12 KFKSAYHRVLSNK 24 (91)
Q Consensus 12 ~~kS~~HRVv~~~ 24 (91)
.+||=+||+.+..
T Consensus 5 ~lksKiHratVT~ 17 (26)
T 1uhe_B 5 MLYSKIHRATITD 17 (26)
T ss_dssp EEEEEEEEEECCE
T ss_pred HhhhhhcceEEec
Confidence 4688899998753
No 13
>2hbt_A EGL nine homolog 1; prolyl hydroxylase, hypoxia inducible factor, HIF, 2- oxoglutarate, oxygenase, oxidoreductase; HET: UN9; 1.60A {Homo sapiens} PDB: 2hbu_A* 2g1m_A* 3hqu_A* 3hqr_A* 2y33_A* 2y34_A* 2g19_A* 3ouj_A* 3ouh_A* 3oui_A*
Probab=26.97 E-value=45 Score=22.49 Aligned_cols=21 Identities=19% Similarity=0.278 Sum_probs=15.2
Q ss_pred ccceeecCCCCCceEEEeeecc
Q 037834 16 AYHRVLSNKEGSRISIGSVFMN 37 (91)
Q Consensus 16 ~~HRVv~~~~~~R~Sia~F~~P 37 (91)
..|.|.. ..+.|+||+..+.-
T Consensus 193 ~~H~V~p-~~~~R~sit~W~~~ 213 (247)
T 2hbt_A 193 NPHEVQP-AYATRYAITVWYFD 213 (247)
T ss_dssp CCEEECC-BSSCEEEEEEEEEE
T ss_pred ceeeecc-CCCEEEEEEEEEcC
Confidence 5888765 56789999875544
No 14
>3bb6_A Uncharacterized protein YEAR; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Escherichia coli} SCOP: b.82.2.13
Probab=26.08 E-value=40 Score=20.99 Aligned_cols=24 Identities=8% Similarity=0.206 Sum_probs=20.6
Q ss_pred cccceeecCCCCCceEEEeeeccC
Q 037834 15 SAYHRVLSNKEGSRISIGSVFMNN 38 (91)
Q Consensus 15 S~~HRVv~~~~~~R~Sia~F~~P~ 38 (91)
-..|||..-++.-|+-+-||+.|.
T Consensus 80 q~wH~Ve~lsdd~~f~leFyc~~~ 103 (127)
T 3bb6_A 80 EKWHNIEAMTDDTYFNIDFFVAPE 103 (127)
T ss_dssp SCEEEEEESSTTCEEEEEEEECHH
T ss_pred CCcEEEEEcCCCEEEEEEEEeCCc
Confidence 357999987778999999999996
Done!