BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037836
         (163 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6AWT8|GG3_ARATH Guanine nucleotide-binding protein subunit gamma 3 OS=Arabidopsis
           thaliana GN=GG3 PE=2 SV=1
          Length = 251

 Score =  127 bits (318), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/143 (56%), Positives = 98/143 (68%), Gaps = 6/143 (4%)

Query: 13  EYPDLYGKRRELAKVQVLEREISFLEEELKTVDRFHPASRSCKEVADFVVAKSDPLIPVN 72
           EYPDLYGKRRE A+VQ+LEREI FLE E+K ++   PASR  KEV+DFVVA SDPLIP  
Sbjct: 40  EYPDLYGKRREAARVQMLEREIGFLEGEIKFIEGVQPASRCIKEVSDFVVANSDPLIPAQ 99

Query: 73  RKNRRSCRFWKWLCGTPCFNFSWLSWICCCCYSKCSIHIELPRCCDCSDCSICCCRPC-- 130
           RK+RRS RFWKWLCG PC +          C SKCS H+  P+CC+C+ CS    + C  
Sbjct: 100 RKSRRSFRFWKWLCG-PCLSLVSFCCC---CQSKCSCHLRKPKCCNCTSCSCIGSKCCDG 155

Query: 131 TCCSIPKCCCKSNCLNCSCKRNC 153
           +CCS   CC + +C +CSC R C
Sbjct: 156 SCCSNICCCPRLSCPSCSCFRGC 178


>sp|Q9FDX9|GG1_ARATH Guanine nucleotide-binding protein subunit gamma 1 OS=Arabidopsis
          thaliana GN=GG1 PE=1 SV=1
          Length = 98

 Score = 42.7 bits (99), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 21/53 (39%), Positives = 34/53 (64%)

Query: 19 GKRRELAKVQVLEREISFLEEELKTVDRFHPASRSCKEVADFVVAKSDPLIPV 71
          GK R LA++  +E+E++FLE+ELK V+     S  C+E+   +    DPL+P+
Sbjct: 19 GKHRILAELARVEQEVAFLEKELKEVENTDIVSTVCEELLSVIEKGPDPLLPL 71


>sp|Q93V47|GG2_ARATH Guanine nucleotide-binding protein subunit gamma 2 OS=Arabidopsis
          thaliana GN=GG2 PE=1 SV=1
          Length = 100

 Score = 38.5 bits (88), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 27/55 (49%), Positives = 37/55 (67%)

Query: 16 DLYGKRRELAKVQVLEREISFLEEELKTVDRFHPASRSCKEVADFVVAKSDPLIP 70
          D  GK R  A+++ LE+E  FLEEEL+ +++   AS SCKE  D V +K DPL+P
Sbjct: 18 DTRGKHRIQAELKRLEQEARFLEEELEQLEKMDNASASCKEFLDSVDSKPDPLLP 72


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.330    0.141    0.552 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 66,355,510
Number of Sequences: 539616
Number of extensions: 2782024
Number of successful extensions: 22907
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 240
Number of HSP's successfully gapped in prelim test: 229
Number of HSP's that attempted gapping in prelim test: 16805
Number of HSP's gapped (non-prelim): 2457
length of query: 163
length of database: 191,569,459
effective HSP length: 108
effective length of query: 55
effective length of database: 133,290,931
effective search space: 7331001205
effective search space used: 7331001205
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.8 bits)
S2: 56 (26.2 bits)