Your job contains 1 sequence.
>037838
MTSSKRVQDRSKNKRIRPLEIAAEKWKIFSKMKFLMEILRKEPEMVIPVRSLDQYRKQIN
LPKPHKMSDFIRKSPKLFELCKDKNGLLWCGMTEEAEDLLEEEERLLEEHSDKAAEYVTR
CLMMSVDKRLPLAKIAHFRRDFGLPLDFRTTWVHKYPELFRVVKCKEDPELEYLELVTWN
PKWAITELEKKVLGVTEAGPDHTPEMLSLPFPLKFPPEYKKVYRYGGKIEHFQKRAYLSP
YADARELKAGSLEFDKRAIAVMHELLSFTLEKRLVTDHLTHYRREFVMPQKLMRLLLKHF
GIFYVSERGKRFSVFLTEGYEDSELIEKRPLVLWREKVLSLSGYRGRKKKIQSFSDLSEL
SDMENKDPLEDDSESVNTSIQFEQAETIESLEDASFADDDEME
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 037838
(403 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:4515103321 - symbol:WTF1 "what's this factor?"... 503 3.7e-48 1
TAIR|locus:504955534 - symbol:RPD1 "ROOT PRIMORDIUM DEFEC... 397 6.3e-37 1
TAIR|locus:2042561 - symbol:AT2G31290 species:3702 "Arabi... 380 4.0e-35 1
TAIR|locus:2138738 - symbol:AT4G08940 species:3702 "Arabi... 371 3.6e-34 1
TAIR|locus:2012981 - symbol:AT1G71850 "AT1G71850" species... 370 4.6e-34 1
TAIR|locus:2207380 - symbol:AT1G79120 species:3702 "Arabi... 364 2.0e-33 1
TAIR|locus:2166305 - symbol:emb1692 "embryo defective 169... 357 1.1e-32 1
TAIR|locus:2009230 - symbol:AT1G06440 species:3702 "Arabi... 342 4.2e-31 1
TAIR|locus:2064940 - symbol:WTF9 "AT2G39120" species:3702... 230 5.3e-17 1
>TAIR|locus:4515103321 [details] [associations]
symbol:WTF1 "what's this factor?" species:3702
"Arabidopsis thaliana" [GO:0005576 "extracellular region"
evidence=ISM] EMBL:CP002687 GO:GO:0016787 EMBL:DQ653402
IPI:IPI00531143 RefSeq:NP_001118908.1 UniGene:At.47990 PRIDE:A0MFS5
EnsemblPlants:AT4G01037.1 GeneID:6240517 KEGG:ath:AT4G01037
TAIR:At4g01037 eggNOG:NOG312847 OMA:RIMLLRE PhylomeDB:A0MFS5
ProtClustDB:CLSN2695822 Genevestigator:A0MFS5 InterPro:IPR021099
Pfam:PF11955 Uniprot:A0MFS5
Length = 528
Score = 503 (182.1 bits), Expect = 3.7e-48, P = 3.7e-48
Identities = 131/392 (33%), Positives = 208/392 (53%)
Query: 31 KMKFLM---EILRKEPEMVIPVRSLDQYRKQINLPKPHKMSDFIRKSPKLFELCKDKNGL 87
K+K ++ +IL +P+ ++ +R L +YR+ + L K + +RK P +FE+ ++
Sbjct: 93 KLKLVLNIRKILVSQPDRMMSLRGLGKYRRDLGLKKRRRFIALLRKYPGVFEIVEEGAYS 152
Query: 88 LWCGMTXXXXXXXXXXXXXXXXHSDKAAEYVTRCLMMSVDKRLPLAKIAHFRRDFGLPLD 147
L MT D + + +MMS+DKR+ L KI+H + D GLPL+
Sbjct: 153 LRFKMTSEAERLYLDEMRIRNELEDVLVVKLRKLVMMSIDKRILLEKISHLKTDLGLPLE 212
Query: 148 FRTTWVHKYPELFRVVKCKEDPELEYLELVTWNPKWAITELEKKVLGVTEAGPDHTPEML 207
FR T +YP+ FRVV P LE L W+P+ A++ E ++E + T E
Sbjct: 213 FRDTICQRYPQYFRVVPTPRGPALE---LTHWDPELAVSAAE-----LSE-DDNRTRESE 263
Query: 208 SLPFPLKFPPEYKKVYRYGG---------KIEHFQKRAYLSPYADARELKAGSLEFDKRA 258
+ PP++ +V G KI F+ Y+SPY D L++G+LE +K A
Sbjct: 264 ERNLIIDRPPKFNRVKLPRGLNLSKSETRKISQFRDMQYISPYKDFSHLRSGTLEKEKHA 323
Query: 259 IAVMHELLSFTLEKRLVTDHLTHYRREFVMPQKLMRLLLKHFGIFYVSERGKRFSVFLTE 318
V+HELLS T EKR + DHLTH+R EF Q+L +L++H +FYVS +G+R SVFL E
Sbjct: 324 CGVIHELLSLTTEKRTLVDHLTHFREEFRFSQQLRGMLIRHPDLFYVSLKGERDSVFLRE 383
Query: 319 GYEDSELIEKRPLVLWREKVLSLSGY-----RGRKKKIQSFSDLS-ELSDMENKDPLED- 371
Y +SELI+K PL L +EK+ +L RG +K + ++ + SD + ++ E+
Sbjct: 384 AYRNSELIDKDPLTLVKEKMRALVSVPRFPRRGGPRKDEEGREVEIDGSDADGEEEEEES 443
Query: 372 DSESVNTSIQFEQAETIESLEDASFADDDEME 403
D+E + + + E + +D + DD+ E
Sbjct: 444 DAEEWSDVDGYLEGEDGGNDDDGDWTDDEGEE 475
>TAIR|locus:504955534 [details] [associations]
symbol:RPD1 "ROOT PRIMORDIUM DEFECTIVE 1" species:3702
"Arabidopsis thaliana" [GO:0009507 "chloroplast" evidence=ISM]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IMP] [GO:0010102 "lateral root morphogenesis"
evidence=IMP] GO:GO:0008285 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0016787 GO:GO:0010102 InterPro:IPR021099 Pfam:PF11955
EMBL:AB189464 IPI:IPI00532796 RefSeq:NP_680759.1 UniGene:At.31579
STRING:Q689D6 EnsemblPlants:AT4G33495.1 GeneID:829487
KEGG:ath:AT4G33495 TAIR:At4g33495 eggNOG:NOG278294
HOGENOM:HOG000243533 InParanoid:Q689D6 OMA:RARERHY
ProtClustDB:CLSN2690356 Genevestigator:Q689D6 Uniprot:Q689D6
Length = 409
Score = 397 (144.8 bits), Expect = 6.3e-37, P = 6.3e-37
Identities = 116/383 (30%), Positives = 195/383 (50%)
Query: 2 TSSKRVQDRSKNKRI-RPLEIAAEKWKIFSKMKFLMEILRKEPEMVIPVRSLDQYRKQIN 60
T+ + QDR ++ +E+ EK KI +KF IL +P I + LD +++
Sbjct: 38 TTIPKKQDRVRDHGYDNYMEV--EK-KIRKVVKFHSLIL-SQPNHTIAISLLDTLARRLG 93
Query: 61 LP-KPHKMSDFIRKSPKLFELCKDK-NGLLWCGMTXXXXXXXXXXXXXXXXHSDKAAEYV 118
L K H+ F+ K P +FE+ + +L+C +T A +
Sbjct: 94 LGFKQHEPGAFLLKFPHVFEIYEHPVQRILYCRLTRKALDQIRHEHEAVLDQIPDAVTRL 153
Query: 119 TRCLMMSVDKRLPLAKIAHFRRDFGLPLDFRTTWVHKYPELFRVVKCKEDPELEYLELVT 178
+ +MMS R+ L + R +FGLP DF + + K+P+ FR++ +E + +Y+E+V
Sbjct: 154 RKLVMMSNTGRIRLEHVRIARTEFGLPEDFEYSVILKHPQFFRLIDGEETRD-KYIEIVE 212
Query: 179 WNPKWAITELEK-KVLGVTEAGPDHTPEMLSLPFPLKFPPEYK--KVYRYGGKIEHFQKR 235
+P +I +E+ + + G D E + F + FPP +K K +R + +Q+
Sbjct: 213 KDPNLSICAIERVREIEYRTKGID--AEDVRFSFVVNFPPGFKIGKYFRIA--VWKWQRL 268
Query: 236 AYLSPYADARELKAGSLE----FDKRAIAVMHELLSFTLEKRLVTDHLTHYRREFVMPQK 291
Y SPY D S+E +KR++A +HELLS T+EK++ + + H+R +P+K
Sbjct: 269 PYWSPYEDISGYDLRSMEAQNRLEKRSVACIHELLSLTVEKKITLERIAHFRNVMNLPKK 328
Query: 292 LMRLLLKHFGIFYVSERG---KRFSVFLTEGYEDSELIEKRPLVLWREKVLSLSGYRGRK 348
L LL+H GIFY+S RG K +VFL EGY+ EL+E + L R ++ L RK
Sbjct: 329 LKEFLLQHQGIFYISTRGNYGKLHTVFLREGYKRGELVEPNDVYLARRRLAELVLMSPRK 388
Query: 349 KKIQSFSDLSELSD-MENKDPLE 370
K+ + +L D ++++D +E
Sbjct: 389 AKVDA--ELVRYRDGLDDEDDVE 409
>TAIR|locus:2042561 [details] [associations]
symbol:AT2G31290 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002685
GO:GO:0016787 EMBL:AC006593 InterPro:IPR021099 Pfam:PF11955
EMBL:AY074309 EMBL:AY096488 IPI:IPI00529360 PIR:H84718
RefSeq:NP_001031455.1 RefSeq:NP_180687.1 UniGene:At.66418
EnsemblPlants:AT2G31290.1 EnsemblPlants:AT2G31290.2 GeneID:817686
KEGG:ath:AT2G31290 TAIR:At2g31290 InParanoid:Q9SJW7 OMA:EGLHEYN
PhylomeDB:Q9SJW7 ProtClustDB:CLSN2683137 ArrayExpress:Q9SJW7
Genevestigator:Q9SJW7 Uniprot:Q9SJW7
Length = 415
Score = 380 (138.8 bits), Expect = 4.0e-35, P = 4.0e-35
Identities = 102/324 (31%), Positives = 164/324 (50%)
Query: 14 KRIRPLEIAAEKWKIFSKMKFLMEILRKEPEMVIPVRSLDQYRKQINLPKPHKMSDFIRK 73
K+ LE A + K + L I+ + P V ++ L + K ++L K ++++K
Sbjct: 29 KKDPDLESALSRNKRWIVNSRLKNIILRCPNQVASIKFLQKKFKTLDLQG--KALNWLKK 86
Query: 74 SPKLFELCKDKNGLLWCGMTXXXXXXXXXXXXXXXXHSDKAAEYVTRCLMMSVDKRLPLA 133
P F + + N +C +T A+ + + LM+SV++RL +
Sbjct: 87 YPCCFHVYLE-NDEYYCRLTKPMMTLVEEEELVKDTQEPVLADRLAKLLMLSVNQRLNVV 145
Query: 134 KIAHFRRDFGLPLDFRTTWVHKYPELFRVVKCKEDPELEYLELVTWNPKWAITELEKKVL 193
K+ F+R FG P D+ V KY ++FR+V +EL+ W P+ A++ +E
Sbjct: 146 KLNEFKRSFGFPDDYVIRIVPKYSDVFRLVNYSGRKSSMEIELLLWKPELAVSAVEA--- 202
Query: 194 GVTEAGPDHTPEMLSLPFPLKFPPEYKKVYRYGGKIEHFQKRAYLSPYADARELKAGSLE 253
+ G + P F P + K + + F Y+SPY D +L GS E
Sbjct: 203 AAKKCGSE--PS-----FSCSLPSTWTKPWE---RFMEFNAFPYISPYEDHGDLVEGSKE 252
Query: 254 FDKRAIAVMHELLSFTLEKRLVTDHLTHYRREFVMPQKLMRLLLKHFGIFYVSERGKRFS 313
+KR++ ++HELLS TL K+L L+H++REF +P+KL +LLKH GIFYV + + +
Sbjct: 253 SEKRSVGLVHELLSLTLWKKLSIVKLSHFKREFGLPEKLNGMLLKHPGIFYVGNKYQVHT 312
Query: 314 VFLTEGYEDSELIEKRPLVLWREK 337
V L EGY SELI K PLV+ ++K
Sbjct: 313 VILREGYNGSELIHKDPLVVVKDK 336
>TAIR|locus:2138738 [details] [associations]
symbol:AT4G08940 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] [GO:0006979 "response to
oxidative stress" evidence=IMP] [GO:0015824 "proline transport"
evidence=RCA] EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0006979
UniGene:At.33721 InterPro:IPR021099 Pfam:PF11955 EMBL:BT010540
EMBL:AK175286 IPI:IPI00519569 RefSeq:NP_192633.2 UniGene:At.66591
DNASU:826472 EnsemblPlants:AT4G08940.1 GeneID:826472
KEGG:ath:AT4G08940 TAIR:At4g08940 eggNOG:NOG259084
HOGENOM:HOG000243193 InParanoid:Q6NQB8 OMA:LAGTEMN PhylomeDB:Q6NQB8
ProtClustDB:CLSN2680952 Genevestigator:Q6NQB8 Uniprot:Q6NQB8
Length = 395
Score = 371 (135.7 bits), Expect = 3.6e-34, P = 3.6e-34
Identities = 92/303 (30%), Positives = 154/303 (50%)
Query: 37 EILRKEPEMVIPVRSLDQYRKQINLPKPHKMSDFIRKSPKLFELCKDKNGLLWCGMTXXX 96
E + K+PE ++ + + +++ P+ K++ FI K P +F+ + +G +W G T
Sbjct: 89 EFISKQPERILRLDDAGKLYRELGFPRGRKVTKFIPKHPLIFQTYRHSDGKIWLGFTEFM 148
Query: 97 XXXXXXXXXXXXXHSDKAAEYVTRCLMMSVDKRLPLAKIAHFRRDFGLPLDFRTTWVHKY 156
V + LMM+ DKR+ L+KI H R FG+P DFR V KY
Sbjct: 149 EDLLDEEKGLMESMELDRVNCVRKLLMMTKDKRILLSKIHHTRLLFGIPEDFRDR-VAKY 207
Query: 157 PELFRVVKCKEDPELEYLELVTWNPKWAITELEKKVLGVTEAGPDHTPEMLSLPFPLKFP 216
P+ FRVV + + LELV W+ A++ELE+ + + E D + FP+K
Sbjct: 208 PDYFRVVTGGDGNRV--LELVNWDTNLAVSELERLFM-IDE---DKAKRVFK--FPVKHG 259
Query: 217 PEYKKVYRYGGKIEHFQKRAYLSPYADARELKAGSLEFDKRAIAVMHELLSFTLEKRLVT 276
E + + K+ +SPY+D +L SLE +K + ++HE L+ TLEKR
Sbjct: 260 KELELEEKDTRKLNLLNTFPLVSPYSDGWKLDVWSLEAEKYRVGIVHEFLNLTLEKRASI 319
Query: 277 DHLTHYRREFVMPQKLMRLLLKHFGIFYVSERGKRFSVFLTEGY-EDSELIEKRPLVLWR 335
H+ ++ EF + ++ ++L K FY++ ++VFL + Y E+ L+ K P V++
Sbjct: 320 HHIVEFKDEFSLTRQTYQMLKKQSMSFYLAGTEMNWTVFLKDAYDENGVLVSKDPQVVFN 379
Query: 336 EKV 338
EK+
Sbjct: 380 EKL 382
>TAIR|locus:2012981 [details] [associations]
symbol:AT1G71850 "AT1G71850" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
EMBL:CP002684 GO:GO:0005739 GO:GO:0016787 EMBL:AC012654
InterPro:IPR021099 Pfam:PF11955 EMBL:AK226624 IPI:IPI00528408
PIR:B96741 RefSeq:NP_177330.1 UniGene:At.52483 STRING:Q9M9G1
PRIDE:Q9M9G1 EnsemblPlants:AT1G71850.1 GeneID:843515
KEGG:ath:AT1G71850 TAIR:At1g71850 InParanoid:Q9M9G1 OMA:DITEKRT
PhylomeDB:Q9M9G1 ProtClustDB:CLSN2720513 Genevestigator:Q9M9G1
Uniprot:Q9M9G1
Length = 470
Score = 370 (135.3 bits), Expect = 4.6e-34, P = 4.6e-34
Identities = 112/402 (27%), Positives = 191/402 (47%)
Query: 7 VQDRSKNKRIRPLEIAAEKWKIFSKMKFLMEILRKEPEMVIPVRSLDQYRKQINLPKPHK 66
V+D K R R L+ A E+ K + + +++R EP +P+ + + + +P +
Sbjct: 25 VEDTYKFVRDRGLDHAVEREKNLRPLLSIKDLIRSEPAKSVPISVITSQKDSLRVPL--R 82
Query: 67 MSDFIRKSPKLF-ELCKDKNGLL-WCGMTXXXXXXXXXXXXXXXXHSDKA--AEYVTRCL 122
+FIR P +F E G+ +T + K A+ + + L
Sbjct: 83 PIEFIRSFPSVFQEFLPGGIGIHPHISLTPEILNHDADEQLVYGSETYKQGLADRLLKLL 142
Query: 123 MMSVDKRLPLAKIAHFRRDFGLPLDFRTTWVHKYPELFRVVKCKEDPELEYLELVTWNPK 182
M++ ++PL + + D GLP D+ T V ++P+ FRV+K K LELV W+ +
Sbjct: 143 MINRINKIPLEILDLLKWDLGLPKDYVETMVPEFPDYFRVIKSKLRGCSGELELVCWSNE 202
Query: 183 WAITELEKKVLGVTEAGPDHTPEMLSLPFPLKFPPEY---KKVYRYGGKIEHFQKRAYLS 239
A++ LEKK + + ++T ++ FP+KF + KK+ ++ I+ +QK Y+S
Sbjct: 203 HAVSVLEKKARTLRKG--EYTKGS-AIAFPMKFSNGFVVDKKMKKW---IDDWQKLPYIS 256
Query: 240 PYADARELKAGSLEFDKRAIAVMHELLSFTLEKRLVTDHLTHYRREFVMPQKLMRLLLKH 299
PY +A L A S E DK A AV+HE+++ + K++ D + H + + R+L H
Sbjct: 257 PYENALHLSATSDESDKWAAAVLHEIMNLFVSKKVEKDAILHLGEFMGLRSRFKRVLHNH 316
Query: 300 FGIFYVSERGKRFSVFLTEGYEDSELIEKRPLVLWREKVLSLSGYRGRKKKIQSFSDLSE 359
GIFY+S + + +V L +GY+ LIE LV R + + L + K S S E
Sbjct: 317 PGIFYLSSKLRTHTVVLRDGYKRGMLIESNELVTSRNRYMKLMNTVKKDNKAVSSSSKKE 376
Query: 360 LSDMENKDPLEDDSESVNTSIQFEQAETIESLEDASFADDDE 401
+ + D+++ N I +E F DDDE
Sbjct: 377 DKGKVEGEVCDTDAKAENDDIS---GSDVEDDRQGDFVDDDE 415
>TAIR|locus:2207380 [details] [associations]
symbol:AT1G79120 species:3702 "Arabidopsis thaliana"
[GO:0005739 "mitochondrion" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016787 EMBL:AC002986
InterPro:IPR021099 Pfam:PF11955 EMBL:AY773833 IPI:IPI00522769
PIR:T01043 RefSeq:NP_178033.1 UniGene:At.50886 PRIDE:O64539
EnsemblPlants:AT1G79120.1 GeneID:844253 KEGG:ath:AT1G79120
TAIR:At1g79120 eggNOG:NOG279247 HOGENOM:HOG000240299
InParanoid:O64539 OMA:VFLKEAY PhylomeDB:O64539
ProtClustDB:CLSN2679815 ArrayExpress:O64539 Genevestigator:O64539
Uniprot:O64539
Length = 413
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 90/253 (35%), Positives = 140/253 (55%)
Query: 120 RCLMMSVDKRLPLAKIAHFRRDFGLPLDFRTTWVHKYPELF--RVVKCKEDPELEYLELV 177
+ LMMSVD R+PL K+ + GLP DF++T + KY E F +V+ K + LE
Sbjct: 166 KLLMMSVDCRVPLEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLE----- 220
Query: 178 TWNPKWAITELEKKVL--GVTEAGPDHTPEMLSLP--------FPLKFPPEYKKVYRYGG 227
W+ AIT E ++ G +E+ D ++ F + FPP ++ Y
Sbjct: 221 NWDSSLAITAREDRLSREGFSESVGDRKRVRITKDGNFLGRNAFKISFPPGFRPNASYLE 280
Query: 228 KIEHFQKRAYLSPYADARELKAGSLEFDKRAIAVMHELLSFTLEKRLVTDHLTHYRREFV 287
+ E +QK + SPY +AR A + KR +AV+HELLS T+EKR+ L + E++
Sbjct: 281 EFEKWQKMEFPSPYLNARRFDAADPKARKRVVAVLHELLSLTMEKRVTCAQLDAFHSEYL 340
Query: 288 MPQKLMRLLLKHFGIFYVSERGKRFSVFLTEGYEDSELIEKRPLVLWREKVLSLSGYR-- 345
+P +L+ L+KH GIFY++ +G R +VFL + Y S LIEK PL+L+ ++ ++L G +
Sbjct: 341 LPSRLILCLIKHQGIFYITNKGARGTVFLKDAYAGSNLIEKCPLLLFHDRFVALCGRKEV 400
Query: 346 GRKKKIQSFSDLS 358
++QS S S
Sbjct: 401 NLSNEMQSSSVFS 413
Score = 116 (45.9 bits), Expect = 0.00066, P = 0.00066
Identities = 47/183 (25%), Positives = 80/183 (43%)
Query: 25 KWKIFSKMKFLMEI--LRKEPEMVIPVRSLDQYRKQ-----INLPKP----HK--MSDFI 71
K K++ ++ L + L K+P +++ ++S+ Q +K +L K HK + I
Sbjct: 58 KQKVYHRVHDLDKAIDLNKKPSLILQLKSIIQAQKHGSLLLRDLEKHVGFVHKWNLMAAI 117
Query: 72 RKSPKLFELCKDKNGLLWCGMTXXXXXXXXXXXXXXXXHSDKAAEYVTRCLMMSVDKRLP 131
K P +F + + +T + + LMMSVD R+P
Sbjct: 118 EKYPTIFYVGGGHKEPPFVMLTEKAKKIAAEESEATESMEPILVNNLRKLLMMSVDCRVP 177
Query: 132 LAKIAHFRRDFGLPLDFRTTWVHKYPELF--RVVKCKEDPELEYLELVTWNPKWAITELE 189
L K+ + GLP DF++T + KY E F +V+ K + LE W+ AIT E
Sbjct: 178 LEKVEFIQSAMGLPQDFKSTLIPKYTEFFSLKVINGKVNLVLE-----NWDSSLAITARE 232
Query: 190 KKV 192
++
Sbjct: 233 DRL 235
>TAIR|locus:2166305 [details] [associations]
symbol:emb1692 "embryo defective 1692" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM]
[GO:0009793 "embryo development ending in seed dormancy"
evidence=NAS] EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0016787
EMBL:AB009051 InterPro:IPR021099 Pfam:PF11955 EMBL:DQ447107
IPI:IPI00537127 RefSeq:NP_201104.1 UniGene:At.55687
EnsemblPlants:AT5G62990.1 GeneID:836419 KEGG:ath:AT5G62990
TAIR:At5g62990 eggNOG:NOG271848 HOGENOM:HOG000115856
InParanoid:Q9FM53 OMA:NLKRRHQ PhylomeDB:Q9FM53
ProtClustDB:CLSN2687529 Genevestigator:Q9FM53 Uniprot:Q9FM53
Length = 494
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 113/376 (30%), Positives = 190/376 (50%)
Query: 35 LMEILRKEPEMVIPVRSLDQYRKQINLPKPHKMSDFIRKSPKLFELCKDKNGLL------ 88
L +L +P+ IP+ L + R + + P + IR+ P +FEL L
Sbjct: 81 LNTLLLSKPKHYIPIEILYKCRSYLCIENPLAILSMIRRYPTIFELFTTPTPHLPMNATK 140
Query: 89 ----WC-GMTXXXXXXXXXXXXXXXXHSDKAAEYVTRCLMMSVDKRLPLAKIAHFRRDFG 143
C +T SDK A + + LM+S +RL L+K+ H DFG
Sbjct: 141 PLSQLCVRLTSAASSLAMQELNLKSEISDKLATKLQKLLMLSSHRRLLLSKLVHIAPDFG 200
Query: 144 LPLDFRTTWVHKYPELFRVVKCKEDPELEYLELVTWNPKWAITELEKKV-LGVTEAGPDH 202
P +FR+ + YP+ F+ V LELV+ +P+ A +V G+ P
Sbjct: 201 FPPNFRSRLCNDYPDKFKTVDTSYG---RALELVSSDPELANQMPSPEVDRGLIVDRPLK 257
Query: 203 TPEMLSLPFPLKFPPEYKKVYRYGGKIEHFQKRAYLSPYADARE-LKAGSLEFDKRAIAV 261
+ L+L L K+ R+ G + F++ + PY + + L + S+E +KRA AV
Sbjct: 258 F-KRLNLRRGLNL----KR--RHQGFLIKFRESPDVCPYKMSSDYLASESIEAEKRACAV 310
Query: 262 MHELLSFTLEKRLVTDHLTHYRREFVMPQKLMRLLLKHFGIFYVSERGKRFSVFLTEGYE 321
+ E+L T+EKR + DHLTH+R+EF +P KL L+++H +FYVS +G R SVFL E Y
Sbjct: 311 VREVLGLTVEKRTLIDHLTHFRKEFSLPNKLRDLIVRHPELFYVSIKGMRDSVFLVEAYN 370
Query: 322 DS-ELIEKRPLVLWREKVLSL--SGYRGRKKKIQSFSDLSELSDMENKDPLEDDSESVNT 378
D+ +L++K ++ RE+++ L G R R+++ + + L + S +E K ++ + ++
Sbjct: 371 DNGDLLDKDERLVIRERLIDLIQEGKRIRRERRRKGATLGDKS-VEEKRKDDETIDDYDS 429
Query: 379 SIQFEQAETIESLEDA 394
+ E + E+L D+
Sbjct: 430 DLDDEYEDGFENLFDS 445
>TAIR|locus:2009230 [details] [associations]
symbol:AT1G06440 species:3702 "Arabidopsis thaliana"
[GO:0009507 "chloroplast" evidence=ISM] EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0016787 EMBL:AC007592
InterPro:IPR021099 Pfam:PF11955 HOGENOM:HOG000243533 EMBL:BT015739
EMBL:BT021137 EMBL:AK228605 IPI:IPI00516223 RefSeq:NP_172132.1
UniGene:At.42341 UniGene:At.74099 EnsemblPlants:AT1G06440.1
GeneID:837156 KEGG:ath:AT1G06440 TAIR:At1g06440 eggNOG:NOG241944
InParanoid:Q9SHI9 OMA:EPNTHIL PhylomeDB:Q9SHI9
ProtClustDB:CLSN2682318 Genevestigator:Q9SHI9 Uniprot:Q9SHI9
Length = 390
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 102/371 (27%), Positives = 170/371 (45%)
Query: 2 TSSKRVQDRSKNKRIRPLEIAAEKWKIFSKMKFLMEILRKEPEMVIPVRSLDQY-RKQIN 60
TS++ V RS++ L +K+K K+ + ++ P P S++ R
Sbjct: 26 TSAQYVASRSRDPVFEKL---MDKYKNLLKVIAIQDLTLANPTADPPSLSIEFLSRLSQK 82
Query: 61 LPKPHKMSDFIRKSPKLFELCKDK-NGLLWCGMTXXXXXXXXXXXXXXXXHSDKAAEYVT 119
L + F+RK P +F + D +C +T + +
Sbjct: 83 LHLNRGAASFLRKYPHIFHVLYDPVKAEPFCRLTDVAMEISRQEALAITATLSLVVDRLV 142
Query: 120 RCLMMSVDKRLPLAKIAHFRRDFGLPLDFRTTWVHKYPELFRVVKCKEDPELEYLELVTW 179
R L MS+ K +PL + R+ GLP DF + + K P LF++ E LELV
Sbjct: 143 RLLSMSISKSIPLRAVFKVWRELGLPDDFEDSVISKNPHLFKLSDGHES-NTHILELVQE 201
Query: 180 NPKWAITELEKKVLGVTEAGP-DHTPEMLSLPFPLK--FPPEYKKVYRYGGKIEHFQKRA 236
K E + V E D + + + F K +PP + + K++ +Q+
Sbjct: 202 EEKRLEFEAAVEKWRVVECSKEDCSVDRTEIQFSFKHSYPPGMRLSKTFKAKVKEWQRLP 261
Query: 237 YLSPYADA---RELKAGSLEFDKRAIAVMHELLSFTLEKRLVTDHLTHYRREFVMPQKLM 293
Y+ PY D ++ ++G + +KRA+A+ HE L+ T+EK + + ++H+R+ F + +
Sbjct: 262 YVGPYEDMVGKKKSRSGVMGIEKRAVAIAHEFLNLTVEKMVEVEKISHFRKCFGIDLNIR 321
Query: 294 RLLLKHFGIFYVSERGKRFSVFLTEGYEDSELIEKRPLVLWREKVLSLSGYRGRKKKIQS 353
L L H G+FYVS +GKR +VFL E YE LI+ P+ R K+L L GR +
Sbjct: 322 DLFLDHPGMFYVSTKGKRHTVFLREAYERGRLIDPNPVYDARRKLLDLV-LLGRHAALSE 380
Query: 354 FSDLSELSDME 364
+ S +S+ E
Sbjct: 381 SGNTS-MSEQE 390
>TAIR|locus:2064940 [details] [associations]
symbol:WTF9 "AT2G39120" species:3702 "Arabidopsis
thaliana" [GO:0005739 "mitochondrion" evidence=IDA] [GO:0000373
"Group II intron splicing" evidence=IMP] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0017004 "cytochrome complex assembly"
evidence=IMP] GO:GO:0005739 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0017004 GO:GO:0003723 GO:GO:0016787 EMBL:AC005770
GO:GO:0000373 InterPro:IPR021099 Pfam:PF11955 UniGene:At.13254
UniGene:At.66409 IPI:IPI00547936 PIR:D84813 RefSeq:NP_181445.1
PaxDb:Q9ZUZ6 PRIDE:Q9ZUZ6 EnsemblPlants:AT2G39120.1 GeneID:818498
KEGG:ath:AT2G39120 TAIR:At2g39120 eggNOG:NOG247058
HOGENOM:HOG000240474 InParanoid:Q9ZUZ6 OMA:IIRCRRS PhylomeDB:Q9ZUZ6
ProtClustDB:CLSN2683245 ArrayExpress:Q9ZUZ6 Genevestigator:Q9ZUZ6
Uniprot:Q9ZUZ6
Length = 387
Score = 230 (86.0 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 83/312 (26%), Positives = 136/312 (43%)
Query: 35 LMEILRKEPEMVIPVRSLDQYRKQINLPKPHKMSDFIRKSPKLFE-LCKDKNGLLWCGMT 93
L + +EP IP+ ++ + +Q ++ K++ F+RK P +FE + L W +T
Sbjct: 55 LKNCIVQEPNRCIPISAISKKTRQFDVST--KIAHFLRKFPSIFEEFVGPEYNLPWFRLT 112
Query: 94 XXXXXXXXXXXXXXXXHSDKAAEYVTRCLMMSVDKRLPLAKIAHFRRDFGLPLDFRTTWV 153
+D + + + ++MS D LPL+ + + GLP D+
Sbjct: 113 PEATELDRQERVVYQTSADDLRDRLKKLILMSKDNVLPLSIVQGMKWYLGLPDDYLQFPD 172
Query: 154 HKYPELFRVVKCKEDPELEYLELVTWNPKWAITELEKKVLGVTEAGPDHTPEMLSLPFPL 213
FR V ++ ++ L V +N + + +K G E + FPL
Sbjct: 173 MNLDSSFRFVDMEDG--VKGLA-VDYNGGDKVLSVLQKNAMKKRRGEVSLEE---IEFPL 226
Query: 214 KFPPEYKKVYRYGGKIE----HFQKRAYLSPYADARELKAGSLEFDKRAIAVMHELLSFT 269
FP K R KIE FQK Y+SPY D L S +KR + +HELL
Sbjct: 227 -FP---SKGCRLRVKIEDWLMEFQKLPYVSPYDDYSCLDPSSDIAEKRVVGFLHELLCLF 282
Query: 270 LEKRLVTDHLTHYRREFVMPQKLMRLLLKHFGIFYVSERGKRFSVFLTEGYEDSELIEKR 329
+E L ++ F +PQK+ + +H IFY+S + K + L E Y D +E
Sbjct: 283 VEHSAERKKLLCLKKHFGLPQKVHKAFERHPQIFYLSMKNKTCTAILREPYRDKASVETH 342
Query: 330 PLVLWREKVLSL 341
P++ R+K + L
Sbjct: 343 PVLGVRKKYIQL 354
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.320 0.136 0.403 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 403 387 0.00093 117 3 11 22 0.38 34
34 0.45 37
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 9
No. of states in DFA: 618 (66 KB)
Total size of DFA: 256 KB (2136 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 32.47u 0.08s 32.55t Elapsed: 00:00:01
Total cpu time: 32.48u 0.08s 32.56t Elapsed: 00:00:01
Start: Fri May 10 02:14:08 2013 End: Fri May 10 02:14:09 2013