BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 037861
         (273 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|P22242|DRPE_CRAPL Desiccation-related protein PCC13-62 OS=Craterostigma plantagineum
           PE=2 SV=1
          Length = 313

 Score =  311 bits (796), Expect = 4e-84,   Method: Compositional matrix adjust.
 Identities = 153/265 (57%), Positives = 188/265 (70%), Gaps = 11/265 (4%)

Query: 6   LPQSDVDLLEFPLNLEYLEAEFFLFGSLGHGLDKVAPNLT-----------ANLNPFTND 54
           +P+SDV LLEFPLNLE LEAEFF + + G G+D++ P L            ANL+PF  D
Sbjct: 35  IPKSDVSLLEFPLNLELLEAEFFAWAAFGKGIDELEPELAKGGPSPIGVQKANLSPFIRD 94

Query: 55  VVLQFVWQEVGHLRAIKNTVKGFPRPLLDLSAGSFAKVIDKAFGKPLNPPLDPYANSINY 114
           ++ QF +QE GH+RAI+++V+GFPRPLLDLSA SFA V+D AFGK L PP DPYAN INY
Sbjct: 95  IIAQFAYQEFGHVRAIQSSVEGFPRPLLDLSAKSFATVMDSAFGKTLKPPFDPYANDINY 154

Query: 115 LIASYLNPYVGLTGYVGANPNLQDAVSQRLAAGLLGVKSGQDAIIRTLLYQKANEKVHPY 174
           L+A Y+ PYVGLTGYVGANP L+  VS++L AGLL V++GQDAIIR LLY++A +KV PY
Sbjct: 155 LLACYVVPYVGLTGYVGANPKLESPVSRKLVAGLLAVEAGQDAIIRALLYERATDKVEPY 214

Query: 175 GIPVAAFTNKISQMRNNLGRSGLKDEGLLVPKFHGTERKIRGNVLAGNEYSIAFDRTPEE 234
           GI VA FTNKIS++RN LG  G+KD GL+V    G E KI GNVLAG++ S+AF RTPE 
Sbjct: 215 GITVAEFTNKISELRNKLGDKGVKDLGLIVEPELGAEGKISGNVLAGDKNSLAFPRTPER 274

Query: 235 ILRIVYGGGHEGIPGGFFPNGANGR 259
            L           P  F P    G+
Sbjct: 275 CLGSCTAAAMRPSPAAFIPKAPTGK 299


>sp|P47085|YJX8_YEAST MEMO1 family protein YJR008W OS=Saccharomyces cerevisiae (strain
           ATCC 204508 / S288c) GN=YJR008W PE=1 SV=1
          Length = 338

 Score = 36.2 bits (82), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 40/148 (27%), Positives = 66/148 (44%), Gaps = 21/148 (14%)

Query: 10  DVDLLEFPLNLEYLEAEFFLFGSLGHGLDKVAPNLTANLNPFTNDVVLQFVWQEVGHLRA 69
           D DL +  +  EY E    LF  + H  D    +L   L P    +V    W+E+     
Sbjct: 106 DTDLCKTLIQKEYPENGKKLFKPMDHDTDMAEHSLEMQL-PM---LVETLKWREIS---- 157

Query: 70  IKNTVKGFPRPLLDLSAGSFAKVIDKAFGKPLNPPL-DPYANSINYLIASYLNPY---VG 125
             +TVK FP   + +S  S    +D+  G  L+  + DP  N++ ++++S    +     
Sbjct: 158 -LDTVKVFP---MMVSHNSVD--VDRCIGNILSEYIKDP--NNL-FIVSSDFCHWGRRFQ 208

Query: 126 LTGYVGANPNLQDAVSQRLAAGLLGVKS 153
            TGYVG+   L DA+ +     +L  +S
Sbjct: 209 YTGYVGSKEELNDAIQEETEVEMLTARS 236


>sp|Q9W4X9|ZW10_DROME Centromere/kinetochore protein zw10 OS=Drosophila melanogaster
           GN=mit(1)15 PE=1 SV=2
          Length = 721

 Score = 34.3 bits (77), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 15/49 (30%), Positives = 27/49 (55%), Gaps = 4/49 (8%)

Query: 77  FPRPLLDLSAGSFAKVIDKAFGKPLNP----PLDPYANSINYLIASYLN 121
           FPR ++  SA  F K++D+   +P +       DP A  I+ ++ +Y+N
Sbjct: 440 FPRCMISKSAQDFVKLMDRILRQPTDKLGDQEADPIAGVISIMLHTYIN 488


>sp|P25502|PUT3_YEAST Proline utilization trans-activator OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=PUT3 PE=1 SV=1
          Length = 979

 Score = 33.9 bits (76), Expect = 1.3,   Method: Composition-based stats.
 Identities = 21/69 (30%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 94  DKAFGKPLNPPLDPYANSINYLIASY--LNPYVGLTGYVGANPNLQDAVSQRLAAGLLGV 151
           +K     LNP +  + NS NYL +SY  LNP   +      N NL   + + +       
Sbjct: 263 NKILNSNLNPAISSFINSNNYLFSSYNFLNPISTIVNLNSINDNLSPLMFKIILKSDTDG 322

Query: 152 KSGQDAIIR 160
            SGQ+ +I+
Sbjct: 323 SSGQEEVIQ 331


>sp|P03018|UVRD_ECOLI DNA helicase II OS=Escherichia coli (strain K12) GN=uvrD PE=1 SV=1
          Length = 720

 Score = 33.5 bits (75), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 4/79 (5%)

Query: 148 LLGVKSGQDAI-IRTLLYQKANEKVHPYGIPVAAFTNK-ISQMRNNLGR-SGLKDEGLLV 204
           L G  SG+  + +  + +  + E   PY I    FTNK  ++MR+ +G+  G    G+ V
Sbjct: 28  LAGAGSGKTRVLVHRIAWLMSVENCSPYSIMAVTFTNKAAAEMRHRIGQLMGTSQGGMWV 87

Query: 205 PKFHG-TERKIRGNVLAGN 222
             FHG   R +R + +  N
Sbjct: 88  GTFHGLAHRLLRAHHMDAN 106


>sp|Q149L6|DJB14_MOUSE DnaJ homolog subfamily B member 14 OS=Mus musculus GN=Dnajb14 PE=2
           SV=1
          Length = 379

 Score = 32.3 bits (72), Expect = 3.3,   Method: Compositional matrix adjust.
 Identities = 17/39 (43%), Positives = 22/39 (56%), Gaps = 3/39 (7%)

Query: 229 DRTPEEILRIVYGGGHEGIPGGFFPNGANGRIAGSHLHN 267
           D TPE++  I +GG   G P G   + +NGR A SH H 
Sbjct: 195 DITPEDLFNIFFGG---GFPSGSVHSFSNGRAAYSHQHQ 230


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.319    0.141    0.423 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 116,198,047
Number of Sequences: 539616
Number of extensions: 5418806
Number of successful extensions: 11771
Number of sequences better than 100.0: 10
Number of HSP's better than 100.0 without gapping: 2
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 11766
Number of HSP's gapped (non-prelim): 10
length of query: 273
length of database: 191,569,459
effective HSP length: 116
effective length of query: 157
effective length of database: 128,974,003
effective search space: 20248918471
effective search space used: 20248918471
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 60 (27.7 bits)