BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037869
(380 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 259 bits (663), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 128/289 (44%), Positives = 188/289 (65%), Gaps = 3/289 (1%)
Query: 31 FTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKA-EMEFAVEVE 89
F+ +EL A++ FS+ N LG GGFG VY GR +DG +AVK+LK + E++F EVE
Sbjct: 28 FSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTEVE 87
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
++ H+NLL LRG+C +RL+VY YM N S+ S L + + LDW +R +IA+G
Sbjct: 88 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 147
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
SA G+ YLH P IIHRD+KA+N+LLD +FE +V DFG AKL+ H+ V+GT+
Sbjct: 148 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGTI 207
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTITEWAEPLIVKG 267
G++APEY GK SE DV+ +G++LLE++TG++ + +L + +W + L+ +
Sbjct: 208 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 267
Query: 268 KFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
K + LVD L+G++ + +++Q I VA+LC QS P +RP M EVV L G
Sbjct: 268 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 316
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 257 bits (656), Expect = 9e-69, Method: Compositional matrix adjust.
Identities = 126/289 (43%), Positives = 187/289 (64%), Gaps = 3/289 (1%)
Query: 31 FTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKA-EMEFAVEVE 89
F+ +EL A++ F + N LG GGFG VY GR +DG +AVK+LK ++ E++F EVE
Sbjct: 20 FSLRELQVASDNFXNKNILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVE 79
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
++ H+NLL LRG+C +RL+VY YM N S+ S L + + LDW +R +IA+G
Sbjct: 80 MISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLRERPESQPPLDWPKRQRIALG 139
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
SA G+ YLH P IIHRD+KA+N+LLD +FE +V DFG AKL+ H+ V+G +
Sbjct: 140 SARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXI 199
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTITEWAEPLIVKG 267
G++APEY GK SE DV+ +G++LLE++TG++ + +L + +W + L+ +
Sbjct: 200 GHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEK 259
Query: 268 KFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
K + LVD L+G++ + +++Q I VA+LC QS P +RP M EVV L G
Sbjct: 260 KLEALVDVDLQGNYKDEEVEQLIQVALLCTQSSPMERPKMSEVVRMLEG 308
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 191 bits (486), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 114/313 (36%), Positives = 180/313 (57%), Gaps = 8/313 (2%)
Query: 1 MGSAFSCCGSEKVEEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWG 60
MGS +S + + + L++ ++R+ +L ATN F +G G FG VY G
Sbjct: 1 MGSKYSK-ATNSINDALSSSYLVPFESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKG 58
Query: 61 RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMP 120
DG ++A+K+ +S+ EF E+E L RH +L+ L G+C ++ +++Y YM
Sbjct: 59 VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 121 NLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSD 180
N +L HL+G + + W++R++I IG+A G+ YLH T IIHRD+K+ N+LLD +
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDEN 175
Query: 181 FEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
F P + DFG +K E G +H+ VKGTLGY+ PEY + G+++E DVYSFG++L E+L
Sbjct: 176 FVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 240 TGRKPI-EKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQ 298
R I + LP + + EWA G+ +++VDP L L++ + AV C+
Sbjct: 236 CARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 299 SEPEKRPNMKEVV 311
E RP+M +V+
Sbjct: 295 LSSEDRPSMGDVL 307
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 189 bits (479), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 113/313 (36%), Positives = 179/313 (57%), Gaps = 8/313 (2%)
Query: 1 MGSAFSCCGSEKVEEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWG 60
MGS +S + + + L++ ++R+ +L ATN F +G G FG VY G
Sbjct: 1 MGSKYSK-ATNSINDALSSSYLVPFESYRV-PLVDLEEATNNFDHKFLIGHGVFGKVYKG 58
Query: 61 RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMP 120
DG ++A+K+ +S+ EF E+E L RH +L+ L G+C ++ +++Y YM
Sbjct: 59 VLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCDERNEMILIYKYME 118
Query: 121 NLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSD 180
N +L HL+G + + W++R++I IG+A G+ YLH T IIHRD+K+ N+LLD +
Sbjct: 119 NGNLKRHLYGSDLPTMSMSWEQRLEICIGAARGLHYLH---TRAIIHRDVKSINILLDEN 175
Query: 181 FEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
F P + DFG +K E +H+ VKGTLGY+ PEY + G+++E DVYSFG++L E+L
Sbjct: 176 FVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKSDVYSFGVVLFEVL 235
Query: 240 TGRKPI-EKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQ 298
R I + LP + + EWA G+ +++VDP L L++ + AV C+
Sbjct: 236 CARSAIVQSLPREMV-NLAEWAVESHNNGQLEQIVDPNLADKIRPESLRKFGDTAVKCLA 294
Query: 299 SEPEKRPNMKEVV 311
E RP+M +V+
Sbjct: 295 LSSEDRPSMGDVL 307
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 171 bits (433), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 171/312 (54%), Gaps = 39/312 (12%)
Query: 24 NNATWRIFTYKELHTATNGFSDD------NKLGEGGFGSVYWGRTSDGLQIAVKKLKAM- 76
++ + F++ EL TN F + NK+GEGGFG VY G ++ +AVKKL AM
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 66
Query: 77 ---NSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYA 133
+ + +F E++V+ + +H+NL+ L G+ + D +VY YMPN SLL L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLD 125
Query: 134 GEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKL 193
G L W R KIA G+A GI +LH H IHRDIK++N+LLD F ++DFG A+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 194 IPE-GVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGV 252
+ + M +R+ GT Y+APE A+ G+++ D+YSFG++LLEI+TG LP
Sbjct: 183 SEKFAQTVMXSRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG------LPA-- 233
Query: 253 KRTITEWAEPLIV----------KGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPE 302
+ E EP ++ + ++ +D K+ D D ++ +VA C+ +
Sbjct: 234 ---VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKN 289
Query: 303 KRPNMKEVVNTL 314
KRP++K+V L
Sbjct: 290 KRPDIKKVQQLL 301
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 170/312 (54%), Gaps = 39/312 (12%)
Query: 24 NNATWRIFTYKELHTATNGFSDD------NKLGEGGFGSVYWGRTSDGLQIAVKKLKAM- 76
++ + F++ EL TN F + NK+GEGGFG VY G ++ +AVKKL AM
Sbjct: 8 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 66
Query: 77 ---NSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYA 133
+ + +F E++V+ + +H+NL+ L G+ + D +VY YMPN SLL L
Sbjct: 67 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLD 125
Query: 134 GEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKL 193
G L W R KIA G+A GI +LH H IHRDIK++N+LLD F ++DFG A+
Sbjct: 126 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 182
Query: 194 IPE-GVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGV 252
+ + M R+ GT Y+APE A+ G+++ D+YSFG++LLEI+TG LP
Sbjct: 183 SEKFAQTVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG------LPA-- 233
Query: 253 KRTITEWAEPLIV----------KGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPE 302
+ E EP ++ + ++ +D K+ D D ++ +VA C+ +
Sbjct: 234 ---VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKN 289
Query: 303 KRPNMKEVVNTL 314
KRP++K+V L
Sbjct: 290 KRPDIKKVQQLL 301
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 170 bits (430), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 111/312 (35%), Positives = 169/312 (54%), Gaps = 39/312 (12%)
Query: 24 NNATWRIFTYKELHTATNGFSDD------NKLGEGGFGSVYWGRTSDGLQIAVKKLKAM- 76
++ + F++ EL TN F + NK+GEGGFG VY G ++ +AVKKL AM
Sbjct: 2 SDTRFHSFSFYELKNVTNNFDERPISVGGNKMGEGGFGVVYKGYVNN-TTVAVKKLAAMV 60
Query: 77 ---NSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYA 133
+ + +F E++V+ + +H+NL+ L G+ + D +VY YMPN SLL L
Sbjct: 61 DITTEELKQQFDQEIKVMAKCQHENLVELLGFSSDGDDLCLVYVYMPNGSLLDRL-SCLD 119
Query: 134 GEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKL 193
G L W R KIA G+A GI +LH H IHRDIK++N+LLD F ++DFG A+
Sbjct: 120 GTPPLSWHMRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARA 176
Query: 194 IPEGVSH-MTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGV 252
+ M R+ GT Y+APE A+ G+++ D+YSFG++LLEI+TG LP
Sbjct: 177 SEKFAQXVMXXRIVGTTAYMAPE-ALRGEITPKSDIYSFGVVLLEIITG------LPA-- 227
Query: 253 KRTITEWAEPLIV----------KGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPE 302
+ E EP ++ + ++ +D K+ D D ++ +VA C+ +
Sbjct: 228 ---VDEHREPQLLLDIKEEIEDEEKTIEDYIDKKM-NDADSTSVEAMYSVASQCLHEKKN 283
Query: 303 KRPNMKEVVNTL 314
KRP++K+V L
Sbjct: 284 KRPDIKKVQQLL 295
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 161 bits (407), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 109/308 (35%), Positives = 163/308 (52%), Gaps = 39/308 (12%)
Query: 28 WRIFTYKELHTATNGFSDD------NKLGEGGFGSVYWGRTSDGLQIAVKKLKAM----N 77
+ F++ EL TN F + NK GEGGFG VY G ++ +AVKKL AM
Sbjct: 3 FHSFSFYELKNVTNNFDERPISVGGNKXGEGGFGVVYKGYVNN-TTVAVKKLAAMVDITT 61
Query: 78 SKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ 137
+ + +F E++V + +H+NL+ L G+ + D +VY Y PN SLL L G
Sbjct: 62 EELKQQFDQEIKVXAKCQHENLVELLGFSSDGDDLCLVYVYXPNGSLLDRL-SCLDGTPP 120
Query: 138 LDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG 197
L W R KIA G+A GI +LH H IHRDIK++N+LLD F ++DFG A+ +
Sbjct: 121 LSWHXRCKIAQGAANGINFLHEN---HHIHRDIKSANILLDEAFTAKISDFGLARASEKF 177
Query: 198 VSHM-TTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
+ +R+ GT Y APE A+ G+++ D+YSFG++LLEI+TG LP +
Sbjct: 178 AQXVXXSRIVGTTAYXAPE-ALRGEITPKSDIYSFGVVLLEIITG------LPA-----V 225
Query: 257 TEWAEPLIV----------KGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPN 306
E EP ++ + ++ +D K D D ++ +VA C+ + KRP+
Sbjct: 226 DEHREPQLLLDIKEEIEDEEKTIEDYIDKK-XNDADSTSVEAXYSVASQCLHEKKNKRPD 284
Query: 307 MKEVVNTL 314
+K+V L
Sbjct: 285 IKKVQQLL 292
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 112 bits (279), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 88/271 (32%), Positives = 136/271 (50%), Gaps = 25/271 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEM--EFAVEVEVLGRVRHKNLLGLRGY 105
K+G G FG+V+ G +AVK L + AE EF EV ++ R+RH N++ G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
IV +Y+ SL LH A E QLD +RR+ +A A+G+ YLH+ P I
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMWGKVSE 224
+HR++K+ N+L+D + V DFG ++L + + ++++ GT ++APE +E
Sbjct: 161 VHRNLKSPNLLVDKKYTVKVCDFGLSRL--KASTFLSSKSAAGTPEWMAPEVLRDEPSNE 218
Query: 225 SCDVYSFGILLLEILTGRKPIEKL-PGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDE 283
DVYSFG++L E+ T ++P L P V V K K L P+
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAA---------VGFKCKRLEIPR------- 262
Query: 284 NQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
N Q + C +EP KRP+ +++ L
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 112 bits (279), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 89/271 (32%), Positives = 134/271 (49%), Gaps = 25/271 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEM--EFAVEVEVLGRVRHKNLLGLRGY 105
K+G G FG+V+ G +AVK L + AE EF EV ++ R+RH N++ G
Sbjct: 44 KIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMGA 102
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
IV +Y+ SL LH A E QLD +RR+ +A A+G+ YLH+ P I
Sbjct: 103 VTQPPNLSIVTEYLSRGSLYRLLHKSGARE-QLDERRRLSMAYDVAKGMNYLHNR-NPPI 160
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMWGKVSE 224
+HRD+K+ N+L+D + V DFG ++L + + ++ GT ++APE +E
Sbjct: 161 VHRDLKSPNLLVDKKYTVKVCDFGLSRL--KASXFLXSKXAAGTPEWMAPEVLRDEPSNE 218
Query: 225 SCDVYSFGILLLEILTGRKPIEKL-PGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDE 283
DVYSFG++L E+ T ++P L P V V K K L P+
Sbjct: 219 KSDVYSFGVILWELATLQQPWGNLNPAQVVAA---------VGFKCKRLEIPR------- 262
Query: 284 NQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
N Q + C +EP KRP+ +++ L
Sbjct: 263 NLNPQVAAIIEGCWTNEPWKRPSFATIMDLL 293
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 108 bits (269), Expect = 6e-24, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 134/276 (48%), Gaps = 41/276 (14%)
Query: 49 LGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G FG V W R D +A+K++++ + + F VE+ L RV H N++ L G
Sbjct: 16 VGRGAFGVVCKAKW-RAKD---VAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGA 69
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQ-----YAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
C + +V +Y SL + LHG Y + W + ++G+ YLH
Sbjct: 70 C--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSM 121
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
+IHRD+K N+LL + L + DFG A I +HMT KG+ ++APE
Sbjct: 122 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEG 177
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
SE CDV+S+GI+L E++T RKP +++ G R + WA V R
Sbjct: 178 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WA------------VHNGTRP 223
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+N K ++ C +P +RP+M+E+V +T
Sbjct: 224 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 259
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 108 bits (269), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 86/276 (31%), Positives = 134/276 (48%), Gaps = 41/276 (14%)
Query: 49 LGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G FG V W R D +A+K++++ + + F VE+ L RV H N++ L G
Sbjct: 17 VGRGAFGVVCKAKW-RAKD---VAIKQIESESERKA--FIVELRQLSRVNHPNIVKLYGA 70
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQ-----YAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
C + +V +Y SL + LHG Y + W + ++G+ YLH
Sbjct: 71 C--LNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSW------CLQCSQGVAYLHSM 122
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
+IHRD+K N+LL + L + DFG A I +HMT KG+ ++APE
Sbjct: 123 QPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDI---QTHMTNN-KGSAAWMAPEVFEG 178
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
SE CDV+S+GI+L E++T RKP +++ G R + WA V R
Sbjct: 179 SNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIM--WA------------VHNGTRP 224
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+N K ++ C +P +RP+M+E+V +T
Sbjct: 225 PLIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMT 260
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 15 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 71
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 72 VSEEPIXIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 126
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 127 HRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 186
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 187 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 235
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 236 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 106 bits (264), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM SLL L G+ ++L +
Sbjct: 61 LQEAQVMKKIRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD++A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 247
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 302
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 363 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 411
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 412 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 438
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 105 bits (263), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 247
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 248 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 302
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 363 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 411
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 412 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 438
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM SLL L G+ ++L +
Sbjct: 61 LQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD++A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEXTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 274 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 330
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 331 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 385
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 386 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 445
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 446 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 494
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 495 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 521
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 105 bits (263), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 18 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 74
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 75 VSEEPIYIVTEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 129
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 130 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 189
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 190 DVWSFGILLTELTTKGRVPY---PGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 238
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 239 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 265
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 136/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 78
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L M I S G+ Y+ + +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS--GMAYVERM---NYV 133
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 194 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 242
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 243 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 269
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK N E F E +V+ ++RH+ L+ L Y
Sbjct: 192 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 248
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 249 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 303
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG +LI + K + + APE A++G+ +
Sbjct: 304 HRDLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 363
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 364 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 412
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + +PE+RP + + L Y
Sbjct: 413 -----DLMCQCWRKDPEERPTFEYLQAFLEDY 439
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 105 bits (262), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM SLL L G+ ++L +
Sbjct: 61 LQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVIEYMSKGSLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD++A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 105 bits (262), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM SLL L G+ ++L +
Sbjct: 61 LQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD++A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 143/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM SLL L G+ ++L +
Sbjct: 61 LQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVCEYMSKGSLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD++A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 84/272 (30%), Positives = 136/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 22 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 78
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L M I S G+ Y+ + +
Sbjct: 79 VSEEPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIAS--GMAYVERM---NYV 133
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 134 HRDLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKS 193
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 194 DVWSFGILLTELTTKGRVPY---PGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 242
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 243 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 269
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 105 bits (261), Expect = 5e-23, Method: Compositional matrix adjust.
Identities = 83/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 191 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 247
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 248 VSEEPIYIVGEYMSKGSLLDFLKGETGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 302
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 303 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 362
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 363 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 411
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + EPE+RP + + L Y
Sbjct: 412 -----DLMCQCWRKEPEERPTFEYLQAFLEDY 438
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 104 bits (260), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 16 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 72
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 73 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 127
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 128 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 188 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 236
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + +PE+RP + + L Y
Sbjct: 237 -----DLMCQCWRKDPEERPTFEYLQAFLEDY 263
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 104 bits (260), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 82/272 (30%), Positives = 138/272 (50%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
KLG+G FG V+ G + ++A+K LK E F E +V+ ++RH+ L+ L Y
Sbjct: 14 KLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-FLQEAQVMKKLRHEKLVQL--YAV 70
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L G+ ++L + + +A A G+ Y+ + +
Sbjct: 71 VSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQLVDMAAQIASGMAYVERM---NYV 125
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ + VADFG A+LI + K + + APE A++G+ +
Sbjct: 126 HRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKS 185
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E+ T GR P PG V R + + E +G ++ P+
Sbjct: 186 DVWSFGILLTELTTKGRVP---YPGMVNREVLDQVE----RG-YRMPCPPECPESLH--- 234
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ C + +PE+RP + + L Y
Sbjct: 235 -----DLMCQCWRKDPEERPTFEYLQAFLEDY 261
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 104 bits (259), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 86/295 (29%), Positives = 142/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM SLL L G+ ++L +
Sbjct: 61 LQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGSLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD+ A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLAAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 103 bits (258), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM LL L G+ ++L +
Sbjct: 61 LQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVMEYMSKGCLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD++A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 103 bits (257), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/295 (28%), Positives = 142/295 (48%), Gaps = 38/295 (12%)
Query: 37 HTATNGFSDDN------------KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEF 84
H T G + D KLG+G FG V+ G + ++A+K LK E F
Sbjct: 2 HMQTQGLAKDAWEIPRESLRLEVKLGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEA-F 60
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E +V+ ++RH+ L+ L Y +++ + IV +YM LL L G+ ++L +
Sbjct: 61 LQEAQVMKKLRHEKLVQL--YAVVSEEPIYIVTEYMSKGCLLDFLKGEMGKYLRL--PQL 116
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
+ +A A G+ Y+ + +HRD++A+N+L+ + VADFG A+LI +
Sbjct: 117 VDMAAQIASGMAYVERM---NYVHRDLRAANILVGENLVCKVADFGLARLIEDNEYTARQ 173
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
K + + APE A++G+ + DV+SFGILL E+ T GR P PG V R + + E
Sbjct: 174 GAKFPIKWTAPEAALYGRFTIKSDVWSFGILLTELTTKGRVPY---PGMVNREVLDQVE- 229
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+G ++ P+ ++ C + +PE+RP + + L Y
Sbjct: 230 ---RG-YRMPCPPECPESLH--------DLMCQCWRKDPEERPTFEYLQAFLEDY 272
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 101 bits (252), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 104/205 (50%), Gaps = 11/205 (5%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 19 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 78
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
Q IV + SL HLH A E + + K+ + IA +A G+ YLH IIH
Sbjct: 79 -KPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 131
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYAMW---GKVS 223
RD+K++N+ L D + DFG A + SH ++ G++ ++APE S
Sbjct: 132 RDLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 191
Query: 224 ESCDVYSFGILLLEILTGRKPIEKL 248
DVY+FGI+L E++TG+ P +
Sbjct: 192 FQSDVYAFGIVLYELMTGQLPYSNI 216
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 86/293 (29%), Positives = 141/293 (48%), Gaps = 49/293 (16%)
Query: 47 NKLGEGGFGSVYWGR------TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
+LGEG FG V+ T D + +AVK LK A +F E E+L ++H++++
Sbjct: 21 RELGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIV 80
Query: 101 GLRGYCAGTDQRLIVYDYMP--NLSLLSHLHG------------QYAGEVQLDWKRRMKI 146
G C D ++V++YM +L+ HG Q GE+ L + + I
Sbjct: 81 KFYGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLS--QMLHI 138
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G++YL + H +HRD+ N L+ ++ + DFG ++ + S RV
Sbjct: 139 ASQIASGMVYL---ASQHFVHRDLATRNCLVGANLLVKIGDFGMSRDV---YSTDYYRVG 192
Query: 207 G----TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAE 261
G + ++ PE M+ K + DV+SFG++L EI T G++P +L TE E
Sbjct: 193 GHTMLPIRWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSN------TEVIE 246
Query: 262 PLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
I +G+ E P++ K+ +V + C Q EP++R N+KE+ L
Sbjct: 247 -CITQGRVLE--RPRVCP-------KEVYDVMLGCWQREPQQRLNIKEIYKIL 289
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 100 bits (250), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
Q IV + SL HLH A E + + K+ + IA +A G+ YLH IIH
Sbjct: 91 AP-QLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYAMW---GKVS 223
RD+K++N+ L D + DFG A SH ++ G++ ++APE S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 224 ESCDVYSFGILLLEILTGRKPIEKL 248
DVY+FGI+L E++TG+ P +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 100 bits (248), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 68/205 (33%), Positives = 103/205 (50%), Gaps = 11/205 (5%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 31 RIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYST 90
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
Q IV + SL HLH A E + + K+ + IA +A G+ YLH IIH
Sbjct: 91 -KPQLAIVTQWCEGSSLYHHLH---ASETKFEMKKLIDIARQTARGMDYLH---AKSIIH 143
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYAMW---GKVS 223
RD+K++N+ L D + DFG A SH ++ G++ ++APE S
Sbjct: 144 RDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYS 203
Query: 224 ESCDVYSFGILLLEILTGRKPIEKL 248
DVY+FGI+L E++TG+ P +
Sbjct: 204 FQSDVYAFGIVLYELMTGQLPYSNI 228
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 98.2 bits (243), Expect = 7e-21, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 73
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
Q IV + SL HLH E + + + + IA +A+G+ YLH + II
Sbjct: 74 TAP-QLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGV-SHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A + SH ++ G++ ++APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ Q IV + SL HLH E + + + + IA +A+G+ YLH + II
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAK---SII 131
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A + SH ++ G++ ++APE M K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 16 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 74
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ Q IV + SL HLH E + + + + IA +A+G+ YLH + II
Sbjct: 75 STKPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAK---SII 128
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGV-SHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A + SH ++ G++ ++APE M K
Sbjct: 129 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 188
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 189 SFQSDVYAFGIVLYELMTGQLPYSNI 214
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ Q IV + SL HLH E + + + + IA +A+G+ YLH + II
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGV-SHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A + SH ++ G++ ++APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 107/206 (51%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 19 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 77
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ Q IV + SL HLH E + + + + IA +A+G+ YLH + II
Sbjct: 78 STKPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAK---SII 131
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGV-SHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A + SH ++ G++ ++APE M K
Sbjct: 132 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 191
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 192 SFQSDVYAFGIVLYELMTGQLPYSNI 217
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 41 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 100
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
Q IV + SL HLH E + + + + IA +A+G+ YLH II
Sbjct: 101 T-KPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 153
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A + SH ++ G++ ++APE M K
Sbjct: 154 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 213
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 214 SFQSDVYAFGIVLYELMTGQLPYSNI 239
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 97.4 bits (241), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
Q IV + SL HLH E + + + + IA +A+G+ YLH II
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A + SH ++ G++ ++APE M K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 97.1 bits (240), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 28 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 84
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 85 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 139
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 200 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 243
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 244 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 275
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 29 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 85
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 86 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 140
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 201 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 244
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 245 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 276
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 97.1 bits (240), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 82
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 198 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 241
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 242 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 76
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 192 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 235
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 22 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 78
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 79 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 133
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 194 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 237
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 238 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 269
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 73/274 (26%), Positives = 131/274 (47%), Gaps = 24/274 (8%)
Query: 46 DNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+ KLG G FG V+ + ++AVK +K + E F E V+ ++H L+ L
Sbjct: 20 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA- 77
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ I+ ++M SLL L + L + + + AEG+ ++ +
Sbjct: 78 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NY 132
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRD++A+N+L+ + +ADFG A++I + K + + APE +G +
Sbjct: 133 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 192
Query: 226 CDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+SFGILL+EI+T GR P PG + P +++ ++ R EN
Sbjct: 193 SDVWSFGILLMEIVTYGRIP---YPGM--------SNPEVIRA-----LERGYRMPRPEN 236
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYD 318
++ N+ + C ++ PE+RP + + + L ++
Sbjct: 237 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDFE 270
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 21 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 77
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 78 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 132
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 193 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 236
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 237 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 268
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 96.7 bits (239), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 76
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 192 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 235
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 26 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 82
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 83 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 137
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 198 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 241
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 242 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 273
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 25 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 81
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 82 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 136
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 197 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 240
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 241 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 272
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 96.3 bits (238), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 30 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 86
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 87 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 141
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 202 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 245
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 246 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 277
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 15 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 71
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 72 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 126
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 187 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 230
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 231 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 262
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 96.3 bits (238), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 78/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 20 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 76
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 192 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 235
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 106/206 (51%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 14 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 72
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ Q IV + SL HLH E + + + + IA +A+G+ YLH + II
Sbjct: 73 STKPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLHAK---SII 126
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGV-SHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A SH ++ G++ ++APE M K
Sbjct: 127 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 186
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 187 SFQSDVYAFGIVLYELMTGQLPYSNI 212
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 105/206 (50%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 34 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGY- 92
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ Q IV + SL HLH E + + + + IA +A+G+ YLH II
Sbjct: 93 STKPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 146
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A SH ++ G++ ++APE M K
Sbjct: 147 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 206
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 207 SFQSDVYAFGIVLYELMTGQLPYSNI 232
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 95.9 bits (237), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 68/206 (33%), Positives = 104/206 (50%), Gaps = 11/206 (5%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG+VY G+ + + + + A + F EV VL + RH N+L GY
Sbjct: 42 QRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNILLFMGYS 101
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
Q IV + SL HLH E + + + + IA +A+G+ YLH II
Sbjct: 102 T-KPQLAIVTQWCEGSSLYHHLH---IIETKFEMIKLIDIARQTAQGMDYLH---AKSII 154
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRVKGTLGYLAPEYA-MWGK--V 222
HRD+K++N+ L D + DFG A SH ++ G++ ++APE M K
Sbjct: 155 HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPY 214
Query: 223 SESCDVYSFGILLLEILTGRKPIEKL 248
S DVY+FGI+L E++TG+ P +
Sbjct: 215 SFQSDVYAFGIVLYELMTGQLPYSNI 240
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 95.5 bits (236), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 130/273 (47%), Gaps = 24/273 (8%)
Query: 46 DNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+ KLG G FG V+ + ++AVK +K + E F E V+ ++H L+ L
Sbjct: 193 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA- 250
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ I+ ++M SLL L + L + + + AEG+ ++ +
Sbjct: 251 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NY 305
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRD++A+N+L+ + +ADFG A++I + K + + APE +G +
Sbjct: 306 IHRDLRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIK 365
Query: 226 CDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+SFGILL+EI+T GR P PG + P +++ + P+ EN
Sbjct: 366 SDVWSFGILLMEIVTYGRIP---YPG--------MSNPEVIRALERGYRMPR-----PEN 409
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ N+ + C ++ PE+RP + + + L +
Sbjct: 410 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 442
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 94.7 bits (234), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 132/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 16 RLGAGQFGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 72
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 73 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 127
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HR+++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 188 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 231
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 232 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 263
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 94.7 bits (234), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 102/203 (50%), Gaps = 15/203 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAE--MEFAVEVEVLGRVRHKNLLGLRGY 105
++G G FG+VY G+ +AVK LK ++ E F EV VL + RH N+L GY
Sbjct: 43 RIGSGSFGTVYKGKWHG--DVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNILLFMGY 100
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
D IV + SL HLH Q E + + + IA +A+G+ YLH +I
Sbjct: 101 MT-KDNLAIVTQWCEGSSLYKHLHVQ---ETKFQMFQLIDIARQTAQGMDYLH---AKNI 153
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV-SHMTTRVKGTLGYLAPEYAMW---GK 221
IHRD+K++N+ L + DFG A + S + G++ ++APE
Sbjct: 154 IHRDMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNP 213
Query: 222 VSESCDVYSFGILLLEILTGRKP 244
S DVYS+GI+L E++TG P
Sbjct: 214 FSFQSDVYSYGIVLYELMTGELP 236
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 94.4 bits (233), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 40/293 (13%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAE-------MEFAVEVEV 90
A N + ++G+GGFG V+ GR D +A+K L +S+ E EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
+ + H N++ L G + +V +++P L L + + W ++++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFE--PL---VADFGFAKLIPEGVSHMTTRV 205
A GI Y+ ++ P I+HRD+++ N+ L S E P+ VADFG + + H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLS----QQSVHSVSGL 186
Query: 206 KGTLGYLAPEY--AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPL 263
G ++APE A +E D YSF ++L ILTG P ++ G
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------------ 234
Query: 264 IVKGKFKELV-DPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
K KF ++ + LR E+ + NV LC +P+KRP+ +V L+
Sbjct: 235 --KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 82/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G FG VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 17 HKLGGGQFGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 73
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 128
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDPSQVYELLEKDYRMERP 232
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 84/276 (30%), Positives = 130/276 (47%), Gaps = 19/276 (6%)
Query: 49 LGEGGFGSV---YWGRTSDGL--QIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LGEG FG V + T+DG +AVK LKA + + E+++L + H++++
Sbjct: 39 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGPQHRSGWKQEIDILRTLYHEHIIKY 98
Query: 103 RGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
+G C AG +V +Y+P SL +L G QL + A EG+ YLH +
Sbjct: 99 KGCCEDAGAASLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQ 153
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG--TLGYLAPEYAM 218
H IHRD+ A NVLLD+D + DFG AK +PEG R G + + APE
Sbjct: 154 ---HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPEGHEXYRVREDGDSPVFWYAPECLK 210
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLR 278
K + DV+SFG+ L E+LT + P I A+ + + EL++ R
Sbjct: 211 EYKFYYASDVWSFGVTLYELLTHCDSSQSPPTKFLELIG-IAQGQMTVLRLTELLERGER 269
Query: 279 GDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + ++ C ++E RP + ++ L
Sbjct: 270 LPRPDKCPAEVYHLMKNCWETEASFRPTFENLIPIL 305
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 94.0 bits (232), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 133/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V+ G + ++A+K LK E F E +++ +++H L+ L Y
Sbjct: 16 RLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPE-SFLEEAQIMKKLKHDKLVQL--YAV 72
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+++ + IV +YM SLL L ++L + +A A G+ Y+ + I
Sbjct: 73 VSEEPIYIVTEYMNKGSLLDFLKDGEGRALKL--PNLVDMAAQVAAGMAYIERM---NYI 127
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++++N+L+ + +ADFG A+LI + K + + APE A++G+ +
Sbjct: 128 HRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKS 187
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL E++T GR P PG R + E E +G R ++
Sbjct: 188 DVWSFGILLTELVTKGRVP---YPGMNNREVLEQVE----RG---------YRMPCPQDC 231
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
+ + C + +PE+RP + + + L Y
Sbjct: 232 PISLHELMIHCWKKDPEERPTFEYLQSFLEDY 263
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 82/293 (27%), Positives = 138/293 (47%), Gaps = 40/293 (13%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAE-------MEFAVEVEV 90
A N + ++G+GGFG V+ GR D +A+K L +S+ E EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
+ + H N++ L G + +V +++P L L + + W ++++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFE--PL---VADFGFAKLIPEGVSHMTTRV 205
A GI Y+ ++ P I+HRD+++ N+ L S E P+ VADFG + + H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTS----QQSVHSVSGL 186
Query: 206 KGTLGYLAPEY--AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPL 263
G ++APE A +E D YSF ++L ILTG P ++ G
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------------ 234
Query: 264 IVKGKFKELV-DPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
K KF ++ + LR E+ + NV LC +P+KRP+ +V L+
Sbjct: 235 --KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 123/269 (45%), Gaps = 24/269 (8%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
+LG G FG V G+ +AVK +K S +E EF E + + ++ H L+ G C
Sbjct: 14 KELGSGQFGVVKLGKWKGQYDVAVKMIKE-GSMSEDEFFQEAQTMMKLSHPKLVKFYGVC 72
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ IV +Y+ N LL++L G L+ + +++ EG+ +L + I
Sbjct: 73 SKEYPIYIVTEYISNGCLLNYLRSHGKG---LEPSQLLEMCYDVCEGMAFLE---SHQFI 126
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD+ A N L+D D V+DFG + + + + K + + APE + K S
Sbjct: 127 HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSSKS 186
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV++FGIL+ E+ + G+ P + +E ++ + L P L D
Sbjct: 187 DVWAFGILMWEVFSLGKMPYDLYTN---------SEVVLKVSQGHRLYRPHLASD----- 232
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ C PEKRP +++++++
Sbjct: 233 --TIYQIMYSCWHELPEKRPTFQQLLSSI 259
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 142
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 143 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 196
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 117
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSCHAP---SSRRTTLSGTL 171
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 93.6 bits (231), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 77/272 (28%), Positives = 131/272 (48%), Gaps = 26/272 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G G V+ G + ++AVK LK S + F E ++ +++H+ L+ R Y
Sbjct: 20 RLGAGQAGEVWMGYYNGHTKVAVKSLK-QGSMSPDAFLAEANLMKQLQHQRLV--RLYAV 76
Query: 108 GTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
T + + I+ +YM N SL+ L + ++L + + +A AEG+ ++ + I
Sbjct: 77 VTQEPIYIITEYMENGSLVDFL--KTPSGIKLTINKLLDMAAQIAEGMAFIEER---NYI 131
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD++A+N+L+ +ADFG A+LI + K + + APE +G +
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 227 DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQ 285
DV+SFGILL EI+T GR P PG + + E + +V P +N
Sbjct: 192 DVWSFGILLTEIVTHGRIP---YPGMTNPEVIQNLE------RGYRMVRP-------DNC 235
Query: 286 LKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ + LC + PE RP + + L +
Sbjct: 236 PEELYQLMRLCWKERPEDRPTFDYLRSVLEDF 267
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 65/200 (32%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+LG G FG V+ G ++ ++AVK LK M+ +A +E E ++ ++H L+ L
Sbjct: 20 RLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAV 76
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ I+ +YM SLL L G+V L + + + AEG+ Y+ + +
Sbjct: 77 VTREEPIYIITEYMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NY 131
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRD++A+NVL+ +ADFG A++I + K + + APE +G +
Sbjct: 132 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 191
Query: 226 CDVYSFGILLLEILT-GRKP 244
DV+SFGILL EI+T G+ P
Sbjct: 192 SDVWSFGILLYEIVTYGKIP 211
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 18 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 133
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 134 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 187
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 188 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 224
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTELCGTLDYLPP 175
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 93.2 bits (230), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 121
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 175
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 176 DYLPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 119
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 173
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 17 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 73
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 74 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 128
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDPSQVYELLEKDYRMERP 232
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 175
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 121
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 175
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 92.8 bits (229), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 1 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 116
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 117 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTL 170
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 102/221 (46%), Gaps = 22/221 (9%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ----LDWKRRMK 145
+ +RH N+L L GY + ++ +Y P G+ E+Q D +R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPR--------GEVYKELQKLSKFDEQRTAT 117
Query: 146 IAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV 205
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTL 171
Query: 206 KGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
GTL YL PE E D++S G+L E L G+ P E
Sbjct: 172 CGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 117
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTL 171
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 81/293 (27%), Positives = 137/293 (46%), Gaps = 40/293 (13%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAE-------MEFAVEVEV 90
A N + ++G+GGFG V+ GR D +A+K L +S+ E EF EV +
Sbjct: 17 ADNEIEYEKQIGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFI 76
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
+ + H N++ L G + +V +++P L L + + W ++++ +
Sbjct: 77 MSNLNHPNIVKLYGLMHNPPR--MVMEFVPCGDLYHRLLDKAH---PIKWSVKLRLMLDI 131
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFE--PL---VADFGFAKLIPEGVSHMTTRV 205
A GI Y+ ++ P I+HRD+++ N+ L S E P+ VADF + + H + +
Sbjct: 132 ALGIEYMQNQ-NPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLS----QQSVHSVSGL 186
Query: 206 KGTLGYLAPEY--AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPL 263
G ++APE A +E D YSF ++L ILTG P ++ G
Sbjct: 187 LGNFQWMAPETIGAEEESYTEKADTYSFAMILYTILTGEGPFDEYSYG------------ 234
Query: 264 IVKGKFKELV-DPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
K KF ++ + LR E+ + NV LC +P+KRP+ +V L+
Sbjct: 235 --KIKFINMIREEGLRPTIPEDCPPRLRNVIELCWSGDPKKRPHFSYIVKELS 285
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 92.4 bits (228), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 36/299 (12%)
Query: 16 GLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQIAVKK 72
G ++PN W + + +KLG G +G VY W + S L +AVK
Sbjct: 1 GAMDPSSPNYDKWEM--------ERTDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKT 50
Query: 73 LKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQY 132
LK + E EF E V+ ++H NL+ L G C I+ ++M +LL +L
Sbjct: 51 LKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 109
Query: 133 AGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
EV M I SA + YL + + IHRD+ A N L+ + VADFG ++
Sbjct: 110 RQEVNAVVLLYMATQISSA--MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 193 LIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
L+ K + + APE + K S DV++FG+LL EI T G P
Sbjct: 165 LMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------ 218
Query: 252 VKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
P I + EL++ R + E ++ + C Q P RP+ E+
Sbjct: 219 ----------PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 121
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 122 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTL 175
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 176 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 119
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTL 173
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTDLCGTLDYLPP 175
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTXLCGTLDYLPP 175
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 20 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 76
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 77 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 131
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFS 191
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 235
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 20 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 76
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 77 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 131
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 132 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 191
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 192 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 235
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 236 EGCPEKVYELMRACWQWNPSDRPSFAEI 263
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 21 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 77
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 132
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIKWTAPESLAYNKFS 192
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 236
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 92.4 bits (228), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 5 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 64
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 65 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 120
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL YL P
Sbjct: 121 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 174
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 175 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 206
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 92.0 bits (227), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 36/299 (12%)
Query: 16 GLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQIAVKK 72
G ++PN W + + +KLG G +G VY W + S L +AVK
Sbjct: 1 GAMDPSSPNYDKWEM--------ERTDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKT 50
Query: 73 LKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQY 132
LK + E EF E V+ ++H NL+ L G C I+ ++M +LL +L
Sbjct: 51 LKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 109
Query: 133 AGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
EV M I SA + YL + + IHRD+ A N L+ + VADFG ++
Sbjct: 110 RQEVSAVVLLYMATQISSA--MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 193 LIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
L+ K + + APE + K S DV++FG+LL EI T G P
Sbjct: 165 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------ 218
Query: 252 VKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
P I + EL++ R + E ++ + C Q P RP+ E+
Sbjct: 219 ----------PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 17 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 73
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 74 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 128
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 129 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFS 188
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 189 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDPSQVYELLEKDYRMERP 232
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 233 EGCPEKVYELMRACWQWNPSDRPSFAEI 260
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 85/299 (28%), Positives = 127/299 (42%), Gaps = 36/299 (12%)
Query: 16 GLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQIAVKK 72
G ++PN W + + +KLG G +G VY W + S L +AVK
Sbjct: 1 GAMDPSSPNYDKWEM--------ERTDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKT 50
Query: 73 LKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQY 132
LK + E EF E V+ ++H NL+ L G C I+ ++M +LL +L
Sbjct: 51 LKEDTMEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYLRECN 109
Query: 133 AGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
EV M I SA + YL + + IHRD+ A N L+ + VADFG ++
Sbjct: 110 RQEVNAVVLLYMATQISSA--MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSR 164
Query: 193 LIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
L+ K + + APE + K S DV++FG+LL EI T G P
Sbjct: 165 LMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY------ 218
Query: 252 VKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
P I + EL++ R + E ++ + C Q P RP+ E+
Sbjct: 219 ----------PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 24 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 80
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 81 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 135
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 136 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 195
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 196 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 239
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 240 EGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 84/294 (28%), Positives = 126/294 (42%), Gaps = 36/294 (12%)
Query: 21 TTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMN 77
++PN W + + +KLG G +G VY W + S L +AVK LK
Sbjct: 6 SSPNYDKWEM--------ERTDITMKHKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDT 55
Query: 78 SKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ 137
+ E EF E V+ ++H NL+ L G C I+ ++M +LL +L EV
Sbjct: 56 MEVE-EFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVN 114
Query: 138 LDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG 197
M I SA + YL + + IHRD+ A N L+ + VADFG ++L+
Sbjct: 115 AVVLLYMATQISSA--MEYLEKK---NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGD 169
Query: 198 VSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTI 256
K + + APE + K S DV++FG+LL EI T G P
Sbjct: 170 TYTAHAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPY----------- 218
Query: 257 TEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
P I + EL++ R + E ++ + C Q P RP+ E+
Sbjct: 219 -----PGIDLSQVYELLEKDYRMERPEGCPEKVYELMRACWQWNPSDRPSFAEI 267
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 10 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 69
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 70 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 125
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL YL P
Sbjct: 126 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 179
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 180 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 211
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 234
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 49 LGEGGFGSV---YWGRTSDGL--QIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LGEG FG V + T+DG +AVK LKA + + E+++L + H++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 103 RGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
+G C G +V +Y+P SL +L G QL + A EG+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHSQ 136
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG--TLGYLAPEYAM 218
H IHR++ A NVLLD+D + DFG AK +PEG + R G + + APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 219 WGKVSESCDVYSFGILLLEILT 240
K + DV+SFG+ L E+LT
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 234
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 23 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 79
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 80 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 134
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 135 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 194
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 195 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 238
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 239 EGCPEKVYELMRACWQWNPSDRPSFAEI 266
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 234
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 92.0 bits (227), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 21 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 77
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 132
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 236
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 91.7 bits (226), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 21 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 77
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 78 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 132
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 133 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 192
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 193 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 236
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 237 EGCPEKVYELMRACWQWNPSDRPSFAEI 264
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 32 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 88
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 89 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 143
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 144 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 203
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 204 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 247
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 248 EGCPEKVYELMRACWQWNPSDRPSFAEI 275
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 76 GVCTREPPFYIIIEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 234
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 104/202 (51%), Gaps = 18/202 (8%)
Query: 49 LGEGGFGSV---YWGRTSDGL--QIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LGEG FG V + T+DG +AVK LKA + + E+++L + H++++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 103 RGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
+G C G +V +Y+P SL +L G QL + A EG+ YLH +
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYLPRHSIGLAQL-----LLFAQQICEGMAYLHAQ 136
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG--TLGYLAPEYAM 218
H IHR++ A NVLLD+D + DFG AK +PEG + R G + + APE
Sbjct: 137 ---HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 219 WGKVSESCDVYSFGILLLEILT 240
K + DV+SFG+ L E+LT
Sbjct: 194 EYKFYYASDVWSFGVTLYELLT 215
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 234
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 91.7 bits (226), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 81/268 (30%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 19 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 76 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 131 NFIHRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 190
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 191 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 234
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 235 EGCPEKVYELMRACWQWNPSDRPSFAEI 262
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 91.3 bits (225), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 71/212 (33%), Positives = 100/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 3 ALEDFEIGRPLGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 62
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 63 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 118
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S T + GTL YL P
Sbjct: 119 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRTTLCGTLDYLPP 172
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 173 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 204
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 91.3 bits (225), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 73/221 (33%), Positives = 101/221 (45%), Gaps = 22/221 (9%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 6 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ----LDWKRRMK 145
+ +RH N+L L GY + ++ +Y P G+ E+Q D +R
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPR--------GEVYKELQKLSKFDEQRTAT 117
Query: 146 IAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV 205
A + Y H + +IHRDIK N+LL S E +ADFG++ P S +
Sbjct: 118 YITELANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXL 171
Query: 206 KGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
GTL YL PE E D++S G+L E L G+ P E
Sbjct: 172 XGTLDYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 212
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 49 LGEGGFGSV---YWGRTSDGL--QIAVKKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LGEG FG V + T+DG +AVK LK + + E+E+L + H++++
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 103 RGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
+G C G +V +Y+P SL +L G QL + A EG+ YLH +
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQ 130
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYAM 218
H IHR + A NVLLD+D + DFG AK +PEG + R G + + APE
Sbjct: 131 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 187
Query: 219 WGKVSESCDVYSFGILLLEILT 240
K + DV+SFG+ L E+LT
Sbjct: 188 ECKFYYASDVWSFGVTLYELLT 209
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/202 (35%), Positives = 102/202 (50%), Gaps = 18/202 (8%)
Query: 49 LGEGGFGSV---YWGRTSDGL--QIAVKKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LGEG FG V + T+DG +AVK LK + + E+E+L + H++++
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 103 RGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
+G C G +V +Y+P SL +L G QL + A EG+ YLH +
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYLPRHCVGLAQL-----LLFAQQICEGMAYLHAQ 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYAM 218
H IHR + A NVLLD+D + DFG AK +PEG + R G + + APE
Sbjct: 132 ---HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 188
Query: 219 WGKVSESCDVYSFGILLLEILT 240
K + DV+SFG+ L E+LT
Sbjct: 189 ECKFYYASDVWSFGVTLYELLT 210
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 91.3 bits (225), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 101/212 (47%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R + +A+K L KA KA E + EVE+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + + ++ +Y P L ++ + + D +R A +
Sbjct: 66 RHPNILRLYGYFHDSTRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL YL P
Sbjct: 122 SYCH---SKKVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDYLPP 175
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 118
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +A+FG++ P S T + GTL
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTL 172
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 90.9 bits (224), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 64/200 (32%), Positives = 105/200 (52%), Gaps = 11/200 (5%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
KLG G FG V+ G ++ ++AVK LK M+ +A +E E ++ ++H L+ L
Sbjct: 19 KLGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLE---EANLMKTLQHDKLVRLYAV 75
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ I+ ++M SLL L G+V L + + + AEG+ Y+ + +
Sbjct: 76 VTKEEPIYIITEFMAKGSLLDFLKSDEGGKVLL--PKLIDFSAQIAEGMAYIERK---NY 130
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRD++A+NVL+ +ADFG A++I + K + + APE +G +
Sbjct: 131 IHRDLRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIK 190
Query: 226 CDVYSFGILLLEILT-GRKP 244
+V+SFGILL EI+T G+ P
Sbjct: 191 SNVWSFGILLYEIVTYGKIP 210
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 84/323 (26%), Positives = 152/323 (47%), Gaps = 50/323 (15%)
Query: 21 TTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWG--RTSDG---LQIAVKKLKA 75
+ PN A + T E+H + + +G G FG VY G +TS G + +A+K LKA
Sbjct: 28 SDPNQAVLKFTT--EIHPSC--VTRQKVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLKA 83
Query: 76 -MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAG 134
K ++F E ++G+ H N++ L G + +I+ +YM N +L L + G
Sbjct: 84 GYTEKQRVDFLGEAGIMGQFSHHNIIRLEGVISKYKPMMIITEYMENGALDKFLR-EKDG 142
Query: 135 EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI 194
E + + + + G A G+ YL + + +HRD+ A N+L++S+ V+DFG ++++
Sbjct: 143 EFSV--LQLVGMLRGIAAGMKYLANM---NYVHRDLAARNILVNSNLVCKVSDFGLSRVL 197
Query: 195 ---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
PE ++ T+ K + + APE + K + + DV+SFGI++ E++T G +P +L
Sbjct: 198 EDDPEA-TYTTSGGKIPIRWTAPEAISYRKFTSASDVWSFGIVMWEVMTYGERPYWELS- 255
Query: 251 GVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
+ + ++ R + + + C Q E +RP ++
Sbjct: 256 ---------------NHEVMKAINDGFRLPTPMDCPSAIYQLMMQCWQQERARRPKFADI 300
Query: 311 VN-------------TLTGYDPR 320
V+ TL +DPR
Sbjct: 301 VSILDKLIRAPDSLKTLADFDPR 323
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 27 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 142
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL
Sbjct: 143 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGTL 196
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 197 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 233
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 90.9 bits (224), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 3 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 118
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL
Sbjct: 119 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTL 172
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 173 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 209
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 102/217 (47%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 119
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +A+FG++ P S T + GTL
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIANFGWSVHAP---SSRRTTLCGTL 173
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 90.5 bits (223), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 2 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 117
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL
Sbjct: 118 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDTLCGTL 171
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 172 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 208
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDYLPP 178
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 71/217 (32%), Positives = 101/217 (46%), Gaps = 14/217 (6%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVE 89
K+ A F LG+G FG+VY R +A+K L KA KA E + EVE
Sbjct: 4 KKRQWALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIG 149
+ +RH N+L L GY + ++ +Y P L ++ + + D +R
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITE 119
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTL 209
A + Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL
Sbjct: 120 LANALSYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTL 173
Query: 210 GYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
YL PE E D++S G+L E L G+ P E
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRAALCGTLDYLPP 175
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 6 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 65
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 66 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL YL P
Sbjct: 122 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRXXLCGTLDYLPP 175
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 176 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 207
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 90.1 bits (222), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 226 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 282
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 283 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVSAVVLLYMATQISSA--MEYLEKK--- 337
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHR++ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 338 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 397
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 398 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 441
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 442 EGCPEKVYELMRACWQWNPSDRPSFAEI 469
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 223 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 279
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 280 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 334
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHR++ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 335 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 394
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 395 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 438
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 439 EGCPEKVYELMRACWQWNPSDRPSFAEI 466
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 65/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 20 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L A ++D + ++ +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQ---AHAERIDHIKLLQYTSQICKGMEYLG- 134
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 135 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 231
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 89.7 bits (221), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 80/268 (29%), Positives = 119/268 (44%), Gaps = 28/268 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 265 HKLGGGQYGEVYEGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 321
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C I+ ++M +LL +L EV M I SA + YL +
Sbjct: 322 GVCTREPPFYIITEFMTYGNLLDYLRECNRQEVNAVVLLYMATQISSA--MEYLEKK--- 376
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHR++ A N L+ + VADFG ++L+ K + + APE + K S
Sbjct: 377 NFIHRNLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFS 436
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + EL++ R +
Sbjct: 437 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYELLEKDYRMERP 480
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E ++ + C Q P RP+ E+
Sbjct: 481 EGCPEKVYELMRACWQWNPSDRPSFAEI 508
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 89.7 bits (221), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 128/273 (46%), Gaps = 34/273 (12%)
Query: 46 DNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+ KLG G FG V+ + ++AVK +K + E F E V+ ++H L+ L
Sbjct: 187 EKKLGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEA-FLAEANVMKTLQHDKLVKLHA- 244
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ I+ ++M SLL L + L + + + AEG+ ++ +
Sbjct: 245 VVTKEPIYIITEFMAKGSLLDFLKSDEGSKQPL--PKLIDFSAQIAEGMAFIEQR---NY 299
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRD++A+N+L+ + +ADFG A++ K + + APE +G +
Sbjct: 300 IHRDLRAANILVSASLVCKIADFGLARV----------GAKFPIKWTAPEAINFGSFTIK 349
Query: 226 CDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+SFGILL+EI+T GR P PG + P +++ ++ R EN
Sbjct: 350 SDVWSFGILLMEIVTYGRIP---YPGM--------SNPEVIRA-----LERGYRMPRPEN 393
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGY 317
++ N+ + C ++ PE+RP + + + L +
Sbjct: 394 CPEELYNIMMRCWKNRPEERPTFEYIQSVLDDF 426
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 70/212 (33%), Positives = 99/212 (46%), Gaps = 14/212 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRV 94
A F LG+G FG+VY R +A+K L KA KA E + EVE+ +
Sbjct: 9 ALEDFEIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVEIQSHL 68
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
RH N+L L GY + ++ +Y P L ++ + + D +R A +
Sbjct: 69 RHPNILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSKFDEQRTATYITELANAL 124
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H + +IHRDIK N+LL S E +ADFG++ P S + GTL YL P
Sbjct: 125 SYCH---SKRVIHRDIKPENLLLGSAGELKIADFGWSVHAP---SSRRDDLCGTLDYLPP 178
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++S G+L E L G+ P E
Sbjct: 179 EMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFE 210
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 17 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 131
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESPIFWYAPESL 189
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 89.4 bits (220), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 72/241 (29%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG A+++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLARVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 16 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 74
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 75 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 130
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 131 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 227
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 69/208 (33%), Positives = 98/208 (47%), Gaps = 14/208 (6%)
Query: 43 FSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRVRHKN 98
F LG+G FG+VY R +A+K L K KA E + EVE+ +RH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+L L GY + ++ +Y P L ++ + + D +R A + Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ +IHRDIK N+LL S+ E +ADFG++ P S T + GTL YL PE
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRTTLCGTLDYLPPEMIE 183
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPIE 246
E D++S G+L E L G P E
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 62/204 (30%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 47 NKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAE---MEFAVEVEVLGRVRHKNLLGL 102
+KLG GG +VY T +++A+K + + E F EV ++ H+N++ +
Sbjct: 17 DKLGGGGMSTVYLAEDTILNIKVAIKAIFIPPREKEETLKRFEREVHNSSQLSHQNIVSM 76
Query: 103 RGYCAGTDQRLIVYDYM--PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
D +V +Y+ P LS HG + + +++ ++ +GI + H
Sbjct: 77 IDVDEEDDCYYLVMEYIEGPTLSEYIESHGPLSVDTAINFTNQI------LDGIKHAH-- 128
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
I+HRDIK N+L+DS+ + DFG AK + E T V GT+ Y +PE A
Sbjct: 129 -DMRIVHRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKGE 187
Query: 221 KVSESCDVYSFGILLLEILTGRKP 244
E D+YS GI+L E+L G P
Sbjct: 188 ATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 17 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 131
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 15 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 73
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 74 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 129
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 130 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 226
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 22 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 80
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 81 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 136
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 137 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 233
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 89.0 bits (219), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 48 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 106
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 107 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 162
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 163 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 220
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 221 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 259
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 20 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 134
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 135 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 231
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 89.0 bits (219), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/267 (30%), Positives = 117/267 (43%), Gaps = 28/267 (10%)
Query: 47 NKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+KLG G +G VY W + S L +AVK LK + E EF E V+ ++H NL+ L
Sbjct: 38 HKLGGGQYGEVYVGVWKKYS--LTVAVKTLKEDTMEVE-EFLKEAAVMKEIKHPNLVQLL 94
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G C IV +YMP +LL +L EV M I SA + YL +
Sbjct: 95 GVCTLEPPFYIVTEYMPYGNLLDYLRECNREEVTAVVLLYMATQISSA--MEYLEKK--- 149
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ IHRD+ A N L+ + VADFG ++L+ K + + APE + S
Sbjct: 150 NFIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNTFS 209
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV++FG+LL EI T G P P I + +L++ R +
Sbjct: 210 IKSDVWAFGVLLWEIATYGMSPY----------------PGIDLSQVYDLLEKGYRMEQP 253
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKE 309
E + + C + P RP+ E
Sbjct: 254 EGCPPKVYELMRACWKWSPADRPSFAE 280
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 23 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 81
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 82 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 137
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 138 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 234
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 21 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 79
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 80 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 135
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 136 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 232
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 17 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 75
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 76 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 131
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 132 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 228
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 117/231 (50%), Gaps = 17/231 (7%)
Query: 23 PNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQIAVKKLKA-MN 77
P +T + + + ATN S D +G G FG V GR + + +A+K LK
Sbjct: 16 PRGSTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYT 74
Query: 78 SKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ 137
K +F E ++G+ H N++ L G + +IV +YM N SL S L + Q
Sbjct: 75 EKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH---DAQ 131
Query: 138 LDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--- 194
+ + + G A G+ YL +HRD+ A N+L++S+ V+DFG ++++
Sbjct: 132 FTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDD 188
Query: 195 PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +P
Sbjct: 189 PEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 238
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 24 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 82
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 83 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 138
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 139 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 235
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 88.6 bits (218), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GFVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 88.6 bits (218), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 35 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 149
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 246
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 88.2 bits (217), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 64/219 (29%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 35 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 93
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 94 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 149
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 150 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 246
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 88.2 bits (217), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTFVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 87.8 bits (216), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 111/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 18 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 76
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +Y+P SL +L + ++D + ++ +G+ YL
Sbjct: 77 YKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 132
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHR++ N+L++++ + DFG K++P+ + + G + + APE
Sbjct: 133 --TKRYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESPIFWYAPESL 190
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 191 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 229
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 16 GLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 74
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 75 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 134
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 135 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 188
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 189 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 247
Query: 244 P 244
P
Sbjct: 248 P 248
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG +++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLGRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 71/241 (29%), Positives = 121/241 (50%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTYVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV +YM N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 63/219 (28%), Positives = 110/219 (50%), Gaps = 17/219 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G FGSV R D LQ +AVKKL+ + +F E+E+L ++H N++
Sbjct: 20 QLGKGNFGSVEMCRY-DPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVK 78
Query: 102 LRGYC--AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+G C AG ++ +++P SL +L + ++D + ++ +G+ YL
Sbjct: 79 YKGVCYSAGRRNLKLIMEFLPYGSLREYLQKH---KERIDHIKLLQYTSQICKGMEYLG- 134
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
T IHRD+ N+L++++ + DFG K++P+ + G + + APE
Sbjct: 135 --TKRYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
K S + DV+SFG++L E+ T + + P R I
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMI 231
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 77/294 (26%), Positives = 132/294 (44%), Gaps = 42/294 (14%)
Query: 37 HTATNGFSDDNKLGEGGFGSVYWGRT------SDGLQIAVKKLKAMNSKAEMEFAVEVEV 90
H + +LGEG FG V+ D + +AVK LK + A +F E E+
Sbjct: 9 HIKRHNIVLKRELGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAEL 68
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMP--NLSLLSHLHGQYA-------GEVQLDWK 141
L ++H++++ G C D ++V++YM +L+ HG A +L
Sbjct: 69 LTNLQHEHIVKFYGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQS 128
Query: 142 RRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHM 201
+ + IA A G++YL + H +HRD+ N L+ + + DFG ++ + S
Sbjct: 129 QMLHIAQQIAAGMVYL---ASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDV---YSTD 182
Query: 202 TTRVKG----TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTI 256
RV G + ++ PE M+ K + DV+S G++L EI T G++P +L +
Sbjct: 183 YYRVGGHTMLPIRWMPPESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNN---EV 239
Query: 257 TEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
E I +G+ L P+ ++ + + C Q EP R N+K +
Sbjct: 240 IE----CITQGRV--LQRPR-------TCPQEVYELMLGCWQREPHMRKNIKGI 280
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 87.4 bits (215), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 121/253 (47%), Gaps = 32/253 (12%)
Query: 10 SEKVEEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGL 66
+E VE + T PN A RI EL LG G FG+VY W + +
Sbjct: 14 TELVEPLTPSGTAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETV 66
Query: 67 QIAVKKLKAMNS----KAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNL 122
+I V +K +N KA +EF E ++ + H +L+ L G C +L+ MP+
Sbjct: 67 KIPVA-IKILNETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHG 124
Query: 123 SLLSHLH---GQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
LL ++H ++ L+W + A+G++YL ++HRD+ A NVL+ S
Sbjct: 125 CLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKS 175
Query: 180 DFEPLVADFGFAKLIPEG--VSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLE 237
+ DFG A+L+ EG + K + ++A E + K + DV+S+G+ + E
Sbjct: 176 PNHVKITDFGLARLL-EGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWE 234
Query: 238 ILT-GRKPIEKLP 249
++T G KP + +P
Sbjct: 235 LMTFGGKPYDGIP 247
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 87.0 bits (214), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 114/220 (51%), Gaps = 18/220 (8%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQIAVKKLKA-MNSKAEMEFAVEV 88
KEL ATN S D +G G FG V GR + + +A+K LK K +F E
Sbjct: 11 KELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 89 EVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAI 148
++G+ H N++ L G + +IV +YM N SL S L + Q + + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEYMENGSLDSFLRKH---DAQFTVIQLVGMLR 125
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRV 205
G A G+ YL +HRD+ A N+L++S+ V+DFG ++++ PE ++ T
Sbjct: 126 GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGG 181
Query: 206 KGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
K + + +PE + K + + DV+S+GI+L E+++ G +P
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 87.0 bits (214), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG V+ G + ++A+K +K S +E +F E EV+ ++ H L+ L G C
Sbjct: 33 QEIGSGQFGLVHLGYWLNKDKVAIKTIKE-GSMSEDDFIEEAEVMMKLSHPKLVQLYGVC 91
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQ---YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V+++M + L +L Q +A E L + + EG+ YL
Sbjct: 92 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC-- 143
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+IHRD+ A N L+ + V+DFG + + + +T K + + +PE + + S
Sbjct: 144 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 202
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV+SFG+L+ E+ + G+ P E R+ +E E + F+ L P+L
Sbjct: 203 SKSDVWSFGVLMWEVFSEGKIPYE------NRSNSEVVED--ISTGFR-LYKPRLAS--- 250
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+ Q +N C + PE RP ++ L
Sbjct: 251 -THVYQIMN---HCWKERPEDRPAFSRLLRQLA 279
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 86.7 bits (213), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 68/208 (32%), Positives = 97/208 (46%), Gaps = 14/208 (6%)
Query: 43 FSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSKA--EMEFAVEVEVLGRVRHKN 98
F LG+G FG+VY R +A+K L K KA E + EVE+ +RH N
Sbjct: 14 FDIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVEIQSHLRHPN 73
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+L L GY + ++ +Y P L ++ + + D +R A + Y H
Sbjct: 74 ILRLYGYFHDATRVYLILEYAP----LGTVYRELQKLSRFDEQRTATYITELANALSYCH 129
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ +IHRDIK N+LL S+ E +ADFG++ P S + GTL YL PE
Sbjct: 130 ---SKRVIHRDIKPENLLLGSNGELKIADFGWSVHAP---SSRRDTLCGTLDYLPPEMIE 183
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPIE 246
E D++S G+L E L G P E
Sbjct: 184 GRMHDEKVDLWSLGVLCYEFLVGMPPFE 211
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 86.3 bits (212), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 72/279 (25%), Positives = 128/279 (45%), Gaps = 30/279 (10%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG V+ G + ++A+K ++ + +E +F E EV+ ++ H L+ L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQ---YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V+++M + L +L Q +A E L + + EG+ YL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEE---A 122
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+IHRD+ A N L+ + V+DFG + + + +T K + + +PE + + S
Sbjct: 123 SVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV+SFG+L+ E+ + G+ P E R+ +E E + F+ L P+L
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE------NRSNSEVVED--ISTGFR-LYKPRLAS--- 230
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRG 321
+ Q +N C + PE RP ++ L G
Sbjct: 231 -THVYQIMN---HCWKERPEDRPAFSRLLRQLAAIAASG 265
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 85.9 bits (211), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V +G+ +A+K +K S +E EF E +V+ + H+ L+ L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I+ +YM N LL++L + ++ +++ E + YL + +H
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A N L++ V+DFG ++ + + + K + + PE M+ K S D
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 228 VYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL 286
+++FG+L+ EI + G+ P E+ T +E AE I +G L P L +
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERF------TNSETAEH-IAQG--LRLYRPHLASE------ 248
Query: 287 KQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + C + ++RP K +++ +
Sbjct: 249 -KVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/241 (28%), Positives = 115/241 (47%), Gaps = 30/241 (12%)
Query: 21 TTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMN 77
T PN A RI EL LG G FG+VY W + ++I V +K +N
Sbjct: 2 TAPNQAQLRILKETELKRV-------KVLGSGAFGTVYKGIWVPEGETVKIPVA-IKILN 53
Query: 78 S----KAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---G 130
KA +EF E ++ + H +L+ L G C +L+ MP+ LL ++H
Sbjct: 54 ETTGPKANVEFMDEALIMASMDHPHLVRLLGVCLSPTIQLVT-QLMPHGCLLEYVHEHKD 112
Query: 131 QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGF 190
++ L+W + A+G++YL ++HRD+ A NVL+ S + DFG
Sbjct: 113 NIGSQLLLNW------CVQIAKGMMYLEER---RLVHRDLAARNVLVKSPNHVKITDFGL 163
Query: 191 AKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKL 248
A+L+ + + K + ++A E + K + DV+S+G+ + E++T G KP + +
Sbjct: 164 ARLLEGDEKEYNADGGKMPIKWMALECIHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGI 223
Query: 249 P 249
P
Sbjct: 224 P 224
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG V+ G + ++A+K ++ + +E +F E EV+ ++ H L+ L G C
Sbjct: 13 QEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 71
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQ---YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V+++M + L +L Q +A E L + + EG+ YL
Sbjct: 72 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC-- 123
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+IHRD+ A N L+ + V+DFG + + + +T K + + +PE + + S
Sbjct: 124 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 182
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV+SFG+L+ E+ + G+ P E R+ +E E + F+ L P+L
Sbjct: 183 SKSDVWSFGVLMWEVFSEGKIPYE------NRSNSEVVED--ISTGFR-LYKPRLAS--- 230
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+ Q +N C + PE RP ++ L
Sbjct: 231 -THVYQIMN---HCWKERPEDRPAFSRLLRQLA 259
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V +G+ +A+K +K S +E EF E +V+ + H+ L+ L G C
Sbjct: 15 ELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 73
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I+ +YM N LL++L + ++ +++ E + YL + +H
Sbjct: 74 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 127
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A N L++ V+DFG ++ + + + K + + PE M+ K S D
Sbjct: 128 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 187
Query: 228 VYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL 286
+++FG+L+ EI + G+ P E+ T +E AE I +G L P L +
Sbjct: 188 IWAFGVLMWEIYSLGKMPYERF------TNSETAEH-IAQG--LRLYRPHLASE------ 232
Query: 287 KQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + C + ++RP K +++ +
Sbjct: 233 -KVYTIMYSCWHEKADERPTFKILLSNI 259
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG V+ G + ++A+K ++ + +E +F E EV+ ++ H L+ L G C
Sbjct: 11 QEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 69
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQ---YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V+++M + L +L Q +A E L + + EG+ YL
Sbjct: 70 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC-- 121
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+IHRD+ A N L+ + V+DFG + + + +T K + + +PE + + S
Sbjct: 122 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 180
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV+SFG+L+ E+ + G+ P E R+ +E E + F+ L P+L
Sbjct: 181 SKSDVWSFGVLMWEVFSEGKIPYE------NRSNSEVVED--ISTGFR-LYKPRLAS--- 228
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+ Q +N C + PE RP ++ L
Sbjct: 229 -THVYQIMN---HCWKERPEDRPAFSRLLRQLA 257
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V +G+ +A+K +K S +E EF E +V+ + H+ L+ L G C
Sbjct: 31 ELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 89
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I+ +YM N LL++L + ++ +++ E + YL + +H
Sbjct: 90 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 143
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A N L++ V+DFG ++ + + + K + + PE M+ K S D
Sbjct: 144 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 203
Query: 228 VYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL 286
+++FG+L+ EI + G+ P E+ T +E AE I +G L P L +
Sbjct: 204 IWAFGVLMWEIYSLGKMPYERF------TNSETAEH-IAQG--LRLYRPHLASE------ 248
Query: 287 KQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + C + ++RP K +++ +
Sbjct: 249 -KVYTIMYSCWHEKADERPTFKILLSNI 275
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V +G+ +A+K +K S +E EF E +V+ + H+ L+ L G C
Sbjct: 22 ELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 80
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I+ +YM N LL++L + ++ +++ E + YL + +H
Sbjct: 81 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 134
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A N L++ V+DFG ++ + + + K + + PE M+ K S D
Sbjct: 135 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 194
Query: 228 VYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL 286
+++FG+L+ EI + G+ P E+ T +E AE I +G L P L +
Sbjct: 195 IWAFGVLMWEIYSLGKMPYERF------TNSETAEH-IAQG--LRLYRPHLASE------ 239
Query: 287 KQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + C + ++RP K +++ +
Sbjct: 240 -KVYTIMYSCWHEKADERPTFKILLSNI 266
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 85.5 bits (210), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 127/273 (46%), Gaps = 30/273 (10%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG V+ G + ++A+K ++ + +E +F E EV+ ++ H L+ L G C
Sbjct: 16 QEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 74
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQ---YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V+++M + L +L Q +A E L + + EG+ YL
Sbjct: 75 LEQAPICLVFEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC-- 126
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+IHRD+ A N L+ + V+DFG + + + +T K + + +PE + + S
Sbjct: 127 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 185
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV+SFG+L+ E+ + G+ P E R+ +E E + F+ L P+L
Sbjct: 186 SKSDVWSFGVLMWEVFSEGKIPYE------NRSNSEVVED--ISTGFR-LYKPRLAS--- 233
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+ Q +N C + PE RP ++ L
Sbjct: 234 -THVYQIMN---HCWRERPEDRPAFSRLLRQLA 262
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V +G+ +A+K +K S +E EF E +V+ + H+ L+ L G C
Sbjct: 11 ELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 69
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I+ +YM N LL++L + ++ +++ E + YL + +H
Sbjct: 70 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 123
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A N L++ V+DFG ++ + + + K + + PE M+ K S D
Sbjct: 124 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 183
Query: 228 VYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL 286
+++FG+L+ EI + G+ P E+ T +E AE I +G L P L +
Sbjct: 184 IWAFGVLMWEIYSLGKMPYERF------TNSETAEH-IAQG--LRLYRPHLASE------ 228
Query: 287 KQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + C + ++RP K +++ +
Sbjct: 229 -KVYTIMYSCWHEKADERPTFKILLSNI 255
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 85.5 bits (210), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V +G+ +A+K +K S +E EF E +V+ + H+ L+ L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I+ +YM N LL++L + ++ +++ E + YL + +H
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A N L++ V+DFG ++ + + + K + + PE M+ K S D
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 228 VYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL 286
+++FG+L+ EI + G+ P E+ T +E AE I +G L P L +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERF------TNSETAEH-IAQG--LRLYRPHLASE------ 233
Query: 287 KQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + C + ++RP K +++ +
Sbjct: 234 -KVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 85.1 bits (209), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 126/268 (47%), Gaps = 24/268 (8%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+LG G FG V +G+ +A+K +K S +E EF E +V+ + H+ L+ L G C
Sbjct: 16 ELGTGQFGVVKYGKWRGQYDVAIKMIKE-GSMSEDEFIEEAKVMMNLSHEKLVQLYGVCT 74
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I+ +YM N LL++L + ++ +++ E + YL + +H
Sbjct: 75 KQRPIFIITEYMANGCLLNYLREM---RHRFQTQQLLEMCKDVCEAMEYLE---SKQFLH 128
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A N L++ V+DFG ++ + + + K + + PE M+ K S D
Sbjct: 129 RDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVRWSPPEVLMYSKFSSKSD 188
Query: 228 VYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL 286
+++FG+L+ EI + G+ P E+ T +E AE I +G L P L +
Sbjct: 189 IWAFGVLMWEIYSLGKMPYERF------TNSETAEH-IAQG--LRLYRPHLASE------ 233
Query: 287 KQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + C + ++RP K +++ +
Sbjct: 234 -KVYTIMYSCWHEKADERPTFKILLSNI 260
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 85.1 bits (209), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTFVDPHTFEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV + M N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GAVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 76/273 (27%), Positives = 122/273 (44%), Gaps = 34/273 (12%)
Query: 49 LGEGGFG-SVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG+G FG ++ G + +K+L + + + F EV+V+ + H N+L G
Sbjct: 18 LGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMRCLEHPNVLKFIGVLY 77
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
+ + +Y+ +L + + Q W +R+ A A G+ YLH + +IIH
Sbjct: 78 KDKRLNFITEYIKGGTLRGIIKSM---DSQYPWSQRVSFAKDIASGMAYLH---SMNIIH 131
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLI------PEGVSHMTT-------RVKGTLGYLAP 214
RD+ + N L+ + +VADFG A+L+ PEG+ + V G ++AP
Sbjct: 132 RDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPDRKKRYTVVGNPYWMAP 191
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVD 274
E E DV+SFGI+L EI+ GR + P + RT+ L V+G
Sbjct: 192 EMINGRSYDEKVDVFSFGIVLCEII-GR--VNADPDYLPRTMDFG---LNVRGFLDRYCP 245
Query: 275 PKLRGDFDENQLKQAINVAVLCVQSEPEKRPNM 307
P F + V C +PEKRP+
Sbjct: 246 PNCPPSF--------FPITVRCCDLDPEKRPSF 270
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 84.7 bits (208), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 16/202 (7%)
Query: 49 LGEGGFGSVYWGR-----TSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGL 102
LGEG FG V R + G Q+AVK LK + + + E+E+L + H+N++
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 103 RGYCA--GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
+G C G + ++ +++P+ SL +L + +++ K+++K A+ +G+ YL
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLP---KNKNKINLKQQLKYAVQICKGMDYLG-- 143
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTR--VKGTLGYLAPEYAM 218
+ +HRD+ A NVL++S+ + + DFG K I T + + + APE M
Sbjct: 144 -SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 219 WGKVSESCDVYSFGILLLEILT 240
K + DV+SFG+ L E+LT
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 84.3 bits (207), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/241 (29%), Positives = 120/241 (49%), Gaps = 20/241 (8%)
Query: 16 GLTTITTPN---NATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQI 68
GL T P+ + T + + + ATN S D +G G FG V GR + + +
Sbjct: 18 GLRTYVDPHTYEDPTQTVHEFAKELDATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISV 76
Query: 69 AVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH 127
A+K LK K +F E ++G+ H N++ L G + +IV + M N SL S
Sbjct: 77 AIKTLKVGYTEKQRRDFLGEASIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSF 136
Query: 128 LHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
L + Q + + + G A G+ YL +HRD+ A N+L++S+ V+D
Sbjct: 137 LRKH---DAQFTVIQLVGMLRGIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSD 190
Query: 188 FGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRK 243
FG ++++ PE ++ T K + + +PE + K + + DV+S+GI+L E+++ G +
Sbjct: 191 FGLSRVLEDDPEA-AYTTRGGKIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGER 249
Query: 244 P 244
P
Sbjct: 250 P 250
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 84.3 bits (207), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 106/202 (52%), Gaps = 16/202 (7%)
Query: 49 LGEGGFGSVYWGR-----TSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGL 102
LGEG FG V R + G Q+AVK LK + + + E+E+L + H+N++
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 103 RGYCA--GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
+G C G + ++ +++P+ SL +L + +++ K+++K A+ +G+ YL
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLP---KNKNKINLKQQLKYAVQICKGMDYLG-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTR--VKGTLGYLAPEYAM 218
+ +HRD+ A NVL++S+ + + DFG K I T + + + APE M
Sbjct: 132 -SRQYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 219 WGKVSESCDVYSFGILLLEILT 240
K + DV+SFG+ L E+LT
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 84.0 bits (206), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 48/287 (16%)
Query: 48 KLGEGGFGSVYWGRT------SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LGEG FG V+ D + +AVK LK + A +F E E+L ++H++++
Sbjct: 48 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 107
Query: 102 LRGYCAGTDQRLIVYDYM-------------PNLSLLSHLHGQYAGEVQLDWKRRMKIAI 148
G C L+V++YM P+ LL+ G+ L + + +A
Sbjct: 108 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA--GGEDVAPGPLGLGQLLAVAS 165
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG- 207
A G++YL H +HRD+ N L+ + DFG ++ I S RV G
Sbjct: 166 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI---YSTDYYRVGGR 219
Query: 208 ---TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ ++ PE ++ K + DV+SFG++L EI T G++P +L + TE A
Sbjct: 220 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL------SNTE-AIDC 272
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
I +G +EL P+ + + C Q EP++R ++K+V
Sbjct: 273 ITQG--RELERPR-------ACPPEVYAIMRGCWQREPQQRHSIKDV 310
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGR----TSDGLQIAVKKLKA-MNSKAEMEFAVEV 88
KEL ATN S D +G G FG V GR + + +A+K LK K +F E
Sbjct: 11 KELD-ATN-ISIDKVVGAGEFGEVCSGRLKLPSKKEISVAIKTLKVGYTEKQRRDFLGEA 68
Query: 89 EVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAI 148
++G+ H N++ L G + +IV + M N SL S L + Q + + +
Sbjct: 69 SIMGQFDHPNIIRLEGVVTKSKPVMIVTEXMENGSLDSFLRKH---DAQFTVIQLVGMLR 125
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRV 205
G A G+ YL +HRD+ A N+L++S+ V+DFG ++++ PE ++ T
Sbjct: 126 GIASGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEA-AYTTRGG 181
Query: 206 KGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
K + + +PE + K + + DV+S+GI+L E+++ G +P
Sbjct: 182 KIPIRWTSPEAIAYRKFTSASDVWSYGIVLWEVMSYGERP 221
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 71/273 (26%), Positives = 126/273 (46%), Gaps = 30/273 (10%)
Query: 47 NKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
++G G FG V+ G + ++A+K ++ + +E +F E EV+ ++ H L+ L G C
Sbjct: 14 QEIGSGQFGLVHLGYWLNKDKVAIKTIRE-GAMSEEDFIEEAEVMMKLSHPKLVQLYGVC 72
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQ---YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V ++M + L +L Q +A E L + + EG+ YL
Sbjct: 73 LEQAPICLVTEFMEHGCLSDYLRTQRGLFAAETLLG------MCLDVCEGMAYLEEAC-- 124
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+IHRD+ A N L+ + V+DFG + + + +T K + + +PE + + S
Sbjct: 125 -VIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYS 183
Query: 224 ESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFD 282
DV+SFG+L+ E+ + G+ P E R+ +E E + F+ L P+L
Sbjct: 184 SKSDVWSFGVLMWEVFSEGKIPYE------NRSNSEVVED--ISTGFR-LYKPRLAS--- 231
Query: 283 ENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+ Q +N C + PE RP ++ L
Sbjct: 232 -THVYQIMN---HCWRERPEDRPAFSRLLRQLA 260
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 48/287 (16%)
Query: 48 KLGEGGFGSVYWGRT------SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LGEG FG V+ D + +AVK LK + A +F E E+L ++H++++
Sbjct: 25 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 84
Query: 102 LRGYCAGTDQRLIVYDYM-------------PNLSLLSHLHGQYAGEVQLDWKRRMKIAI 148
G C L+V++YM P+ LL+ G+ L + + +A
Sbjct: 85 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA--GGEDVAPGPLGLGQLLAVAS 142
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG- 207
A G++YL H +HRD+ N L+ + DFG ++ I S RV G
Sbjct: 143 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI---YSTDYYRVGGR 196
Query: 208 ---TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ ++ PE ++ K + DV+SFG++L EI T G++P +L + TE A
Sbjct: 197 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL------SNTE-AIDC 249
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
I +G +EL P+ + + C Q EP++R ++K+V
Sbjct: 250 ITQG--RELERPR-------ACPPEVYAIMRGCWQREPQQRHSIKDV 287
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 79/287 (27%), Positives = 132/287 (45%), Gaps = 48/287 (16%)
Query: 48 KLGEGGFGSVYWGRT------SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LGEG FG V+ D + +AVK LK + A +F E E+L ++H++++
Sbjct: 19 ELGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVR 78
Query: 102 LRGYCAGTDQRLIVYDYM-------------PNLSLLSHLHGQYAGEVQLDWKRRMKIAI 148
G C L+V++YM P+ LL+ G+ L + + +A
Sbjct: 79 FFGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLA--GGEDVAPGPLGLGQLLAVAS 136
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG- 207
A G++YL H +HRD+ N L+ + DFG ++ I S RV G
Sbjct: 137 QVAAGMVYL---AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDI---YSTDYYRVGGR 190
Query: 208 ---TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ ++ PE ++ K + DV+SFG++L EI T G++P +L + TE A
Sbjct: 191 TMLPIRWMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQL------SNTE-AIDC 243
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
I +G +EL P+ + + C Q EP++R ++K+V
Sbjct: 244 ITQG--RELERPR-------ACPPEVYAIMRGCWQREPQQRHSIKDV 281
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 83.6 bits (205), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 74/286 (25%), Positives = 118/286 (41%), Gaps = 50/286 (17%)
Query: 49 LGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G GGFG VY W ++ A S+ E ++ ++H N++ LRG
Sbjct: 15 IGIGGFGKVYRAFWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIALRGV 74
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
C +V ++ L L G+ ++ ++W A+ A G+ YLH E
Sbjct: 75 CLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEAIVP 128
Query: 165 IIHRDIKASNVLLDSDFEP--------LVADFGFAKLIPEGVSHMTTRVK--GTLGYLAP 214
IIHRD+K+SN+L+ E + DFG A+ H TT++ G ++AP
Sbjct: 129 IIHRDLKSSNILILQKVENGDLSNKILKITDFGLAR-----EWHRTTKMSAAGAYAWMAP 183
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPG-----GVKRTITEWAEPLIVKGKF 269
E S+ DV+S+G+LL E+LTG P + G GV P F
Sbjct: 184 EVIRASMFSKGSDVWSYGVLLWELLTGEVPFRGIDGLAVAYGVAMNKLALPIPSTCPEPF 243
Query: 270 KELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+L++ C +P RP+ +++ LT
Sbjct: 244 AKLMED--------------------CWNPDPHSRPSFTNILDQLT 269
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 47 NKLGEGGFGSVYWGR-----TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
++LG+G FGSV R + G +AVK+L+ + +F E+++L + ++
Sbjct: 16 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 75
Query: 102 LRG--YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
RG Y G +V +Y+P+ L L A +LD R + + +G+ YL
Sbjct: 76 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLG- 131
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG--TLGYLAPEYA 217
+ +HRD+ A N+L++S+ +ADFG AKL+P + R G + + APE
Sbjct: 132 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 189
Query: 218 MWGKVSESCDVYSFGILLLEILT 240
S DV+SFG++L E+ T
Sbjct: 190 SDNIFSRQSDVWSFGVVLYELFT 212
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 47 NKLGEGGFGSVYWGR-----TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
++LG+G FGSV R + G +AVK+L+ + +F E+++L + ++
Sbjct: 17 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 76
Query: 102 LRG--YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
RG Y G +V +Y+P+ L L A +LD R + + +G+ YL
Sbjct: 77 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGS 133
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG--TLGYLAPEYA 217
+HRD+ A N+L++S+ +ADFG AKL+P + R G + + APE
Sbjct: 134 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 190
Query: 218 MWGKVSESCDVYSFGILLLEILT 240
S DV+SFG++L E+ T
Sbjct: 191 SDNIFSRQSDVWSFGVVLYELFT 213
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 83.2 bits (204), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 101/203 (49%), Gaps = 15/203 (7%)
Query: 47 NKLGEGGFGSVYWGR-----TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
++LG+G FGSV R + G +AVK+L+ + +F E+++L + ++
Sbjct: 29 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 88
Query: 102 LRG--YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
RG Y G +V +Y+P+ L L A +LD R + + +G+ YL
Sbjct: 89 YRGVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLG- 144
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGYLAPEYA 217
+ +HRD+ A N+L++S+ +ADFG AKL+P + R G + + APE
Sbjct: 145 --SRRCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSPIFWYAPESL 202
Query: 218 MWGKVSESCDVYSFGILLLEILT 240
S DV+SFG++L E+ T
Sbjct: 203 SDNIFSRQSDVWSFGVVLYELFT 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 82.8 bits (203), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 61/203 (30%), Positives = 100/203 (49%), Gaps = 15/203 (7%)
Query: 47 NKLGEGGFGSVYWGR-----TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
++LG+G FGSV R + G +AVK+L+ + +F E+++L + ++
Sbjct: 13 SQLGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVK 72
Query: 102 LRG--YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
RG Y G + +V +Y+P+ L L A +LD R + + +G+ YL
Sbjct: 73 YRGVSYGPGRPELRLVMEYLPSGCLRDFLQRHRA---RLDASRLLLYSSQICKGMEYLGS 129
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG--TLGYLAPEYA 217
+HRD+ A N+L++S+ +ADFG AKL+P R G + + APE
Sbjct: 130 R---RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSPIFWYAPESL 186
Query: 218 MWGKVSESCDVYSFGILLLEILT 240
S DV+SFG++L E+ T
Sbjct: 187 SDNIFSRQSDVWSFGVVLYELFT 209
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 82.4 bits (202), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G+G FG V G G ++AVK +K N F E V+ ++RH NL+ L G
Sbjct: 201 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 257
Query: 109 TDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
L IV +YM SL+ +L + G L +K ++ E + YL + +H
Sbjct: 258 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 312
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A NVL+ D V+DFG K E S T K + + APE K S D
Sbjct: 313 RDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTG-KLPVKWTAPEALREKKFSTKSD 368
Query: 228 VYSFGILLLEILT-GRKPIEKLP 249
V+SFGILL EI + GR P ++P
Sbjct: 369 VWSFGILLWEIYSFGRVPYPRIP 391
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 105/222 (47%), Gaps = 18/222 (8%)
Query: 36 LHTATNG-FSDDNKLGEGGFGSVY-WGRTSDGLQIAVKKLKA-MNSKAEMEFAVEVEVLG 92
L T T G + +LG GGFG V W G Q+A+K+ + ++ K + +E++++
Sbjct: 8 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 67
Query: 93 RVRHKNLLGLRGYCAG------TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKI 146
++ H N++ R G D L+ +Y L +L+ Q+ L +
Sbjct: 68 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN-QFENCCGLKEGPIRTL 126
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMTT 203
+ + YLH IIHRD+K N++L + L+ D G+AK + +G + T
Sbjct: 127 LSDISSALRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG--ELCT 181
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
GTL YLAPE K + + D +SFG L E +TG +P
Sbjct: 182 EFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 223
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 69/228 (30%), Positives = 108/228 (47%), Gaps = 30/228 (13%)
Query: 36 LHTATNG-FSDDNKLGEGGFGSVY-WGRTSDGLQIAVKKLKA-MNSKAEMEFAVEVEVLG 92
L T T G + +LG GGFG V W G Q+A+K+ + ++ K + +E++++
Sbjct: 9 LPTQTCGPWEMKERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMK 68
Query: 93 RVRHKNLLGLRGYCAG------TDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDW 140
++ H N++ R G D L+ +Y L +L+ G G +
Sbjct: 69 KLNHPNVVSAREVPDGLQKLAPNDLPLLAMEYCEGGDLRKYLNQFENCCGLKEGPI---- 124
Query: 141 KRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV---ADFGFAKLIPEG 197
R + I SA + YLH IIHRD+K N++L + L+ D G+AK + +G
Sbjct: 125 -RTLLSDISSA--LRYLHEN---RIIHRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQG 178
Query: 198 VSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ T GTL YLAPE K + + D +SFG L E +TG +P
Sbjct: 179 --ELCTEFVGTLQYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRPF 224
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 23/260 (8%)
Query: 49 LGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG+G +G VY GR S+ ++IA+K++ +S+ E+ + ++HKN++ G +
Sbjct: 30 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 89
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I + +P SL + L ++ G ++ + + EG+ YLH I+H
Sbjct: 90 ENGFIKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 145
Query: 168 RDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGK--VSE 224
RDIK NVL+++ L ++DFG +K + G++ T GTL Y+APE G +
Sbjct: 146 RDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGK 204
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
+ D++S G ++E+ TG+ P +L E + G FK V P++ E+
Sbjct: 205 AADIWSLGCTIIEMATGKPPFYEL--------GEPQAAMFKVGMFK--VHPEI----PES 250
Query: 285 QLKQAINVAVLCVQSEPEKR 304
+A + C + +P+KR
Sbjct: 251 MSAEAKAFILKCFEPDPDKR 270
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G+G FG V G G ++AVK +K N F E V+ ++RH NL+ L G
Sbjct: 14 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 70
Query: 109 TDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
L IV +YM SL+ +L + G L +K ++ E + YL + +H
Sbjct: 71 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 125
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A NVL+ D V+DFG K E S T K + + APE K S D
Sbjct: 126 RDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTG-KLPVKWTAPEALREKKFSTKSD 181
Query: 228 VYSFGILLLEILT-GRKPIEKLP 249
V+SFGILL EI + GR P ++P
Sbjct: 182 VWSFGILLWEIYSFGRVPYPRIP 204
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 82.0 bits (201), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 129/260 (49%), Gaps = 23/260 (8%)
Query: 49 LGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG+G +G VY GR S+ ++IA+K++ +S+ E+ + ++HKN++ G +
Sbjct: 16 LGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQPLHEEIALHKHLKHKNIVQYLGSFS 75
Query: 108 GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
I + +P SL + L ++ G ++ + + EG+ YLH I+H
Sbjct: 76 ENGFIKIFMEQVPGGSLSALLRSKW-GPLKDNEQTIGFYTKQILEGLKYLHDN---QIVH 131
Query: 168 RDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGK--VSE 224
RDIK NVL+++ L ++DFG +K + G++ T GTL Y+APE G +
Sbjct: 132 RDIKGDNVLINTYSGVLKISDFGTSKRL-AGINPCTETFTGTLQYMAPEIIDKGPRGYGK 190
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
+ D++S G ++E+ TG+ P +L E + G FK V P++ E+
Sbjct: 191 AADIWSLGCTIIEMATGKPPFYEL--------GEPQAAMFKVGMFK--VHPEI----PES 236
Query: 285 QLKQAINVAVLCVQSEPEKR 304
+A + C + +P+KR
Sbjct: 237 MSAEAKAFILKCFEPDPDKR 256
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 81.6 bits (200), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 68/234 (29%), Positives = 118/234 (50%), Gaps = 31/234 (13%)
Query: 32 TYKELHTATNGFSDD---------NKLGEGGFGSVYWGRTS----DGLQIAVKKLKA-MN 77
TY++ + A + F+ + +G G FG V GR + +A+K LK
Sbjct: 25 TYEDPNRAVHQFAKELDASCIKIERVIGAGEFGEVCSGRLKLPGKRDVAVAIKTLKVGYT 84
Query: 78 SKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQYAG 134
K +F E ++G+ H N++ L G +IV ++M N +L + L GQ+
Sbjct: 85 EKQRRDFLCEASIMGQFDHPNVVHLEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQFT- 143
Query: 135 EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI 194
+QL + + G A G+ YL +HRD+ A N+L++S+ V+DFG +++I
Sbjct: 144 VIQL-----VGMLRGIAAGMRYL---ADMGYVHRDLAARNILVNSNLVCKVSDFGLSRVI 195
Query: 195 ---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
PE V + TT K + + APE + K + + DV+S+GI++ E+++ G +P
Sbjct: 196 EDDPEAV-YTTTGGKIPVRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 248
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 81.6 bits (200), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/203 (34%), Positives = 99/203 (48%), Gaps = 14/203 (6%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G+G FG V G G ++AVK +K N F E V+ ++RH NL+ L G
Sbjct: 29 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 85
Query: 109 TDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
L IV +YM SL+ +L + G L +K ++ E + YL + +H
Sbjct: 86 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 140
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A NVL+ D V+DFG K E S T K + + APE K S D
Sbjct: 141 RDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTG-KLPVKWTAPEALREKKFSTKSD 196
Query: 228 VYSFGILLLEILT-GRKPIEKLP 249
V+SFGILL EI + GR P ++P
Sbjct: 197 VWSFGILLWEIYSFGRVPYPRIP 219
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/248 (27%), Positives = 120/248 (48%), Gaps = 32/248 (12%)
Query: 15 EGLTTITTPNNATWRIFTYKELHTATNGFSDD---------NKLGEGGFGSVYWGRTS-- 63
+G+ T P FT+++ + A F+ + +G G FG V GR
Sbjct: 1 QGVRTFVDP-------FTFEDPNQAVREFAKEIDASCIKIEKVIGVGEFGEVCSGRLKVP 53
Query: 64 --DGLQIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMP 120
+ +A+K LKA K +F E ++G+ H N++ L G +I+ +YM
Sbjct: 54 GKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLEGVVTKCKPVMIITEYME 113
Query: 121 NLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSD 180
N SL + L + G + M IGS G+ YL +HRD+ A N+L++S+
Sbjct: 114 NGSLDAFLR-KNDGRFTVIQLVGMLRGIGS--GMKYLSDMSA---VHRDLAARNILVNSN 167
Query: 181 FEPLVADFGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLE 237
V+DFG ++++ PE ++ T K + + APE + K + + DV+S+GI++ E
Sbjct: 168 LVCKVSDFGMSRVLEDDPEA-AYTTRGGKIPIRWTAPEAIAYRKFTSASDVWSYGIVMWE 226
Query: 238 ILT-GRKP 244
+++ G +P
Sbjct: 227 VMSYGERP 234
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 102/204 (50%), Gaps = 14/204 (6%)
Query: 49 LGEGGFGSVYWGRT----SDGLQIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+G G G V +GR + +A+K LKA + +F E ++G+ H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G +IV +YM N SL + L + Q + + + G G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE--GVSHMTTRVKGTLGYLAPEYAMWGK 221
+HRD+ A NVL+DS+ V+DFG ++++ + ++ TT K + + APE +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAYTTTGGKIPIRWTAPEAIAFRT 230
Query: 222 VSESCDVYSFGILLLEILT-GRKP 244
S + DV+SFG+++ E+L G +P
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 70/203 (34%), Positives = 98/203 (48%), Gaps = 14/203 (6%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G+G FG V G G ++AVK +K N F E V+ ++RH NL+ L G
Sbjct: 20 IGKGEFGDVMLGDYR-GNKVAVKCIK--NDATAQAFLAEASVMTQLRHSNLVQLLGVIVE 76
Query: 109 TDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIH 167
L IV +YM SL+ +L + G L +K ++ E + YL + +H
Sbjct: 77 EKGGLYIVTEYMAKGSLVDYLRSR--GRSVLGGDCLLKFSLDVCEAMEYLEGN---NFVH 131
Query: 168 RDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCD 227
RD+ A NVL+ D V+DFG K E S T K + + APE S D
Sbjct: 132 RDLAARNVLVSEDNVAKVSDFGLTK---EASSTQDTG-KLPVKWTAPEALREAAFSTKSD 187
Query: 228 VYSFGILLLEILT-GRKPIEKLP 249
V+SFGILL EI + GR P ++P
Sbjct: 188 VWSFGILLWEIYSFGRVPYPRIP 210
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 80.5 bits (197), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/274 (26%), Positives = 114/274 (41%), Gaps = 39/274 (14%)
Query: 48 KLGEGGFG-SVYWGRTSDGLQIAVKKLKA--MNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
K+GEG FG ++ T DG Q +K++ M+SK E EV VL ++H N++ R
Sbjct: 31 KIGEGSFGKAILVKSTEDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQ----YAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
IV DY L ++ Q + + LDW ++ +A L H
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLA---------LKHV 141
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
I+HRDIK+ N+ L D + DFG A+++ V + GT YL+PE
Sbjct: 142 HDRKILHRDIKSQNIFLTKDGTVQLGDFGIARVLNSTV-ELARACIGTPYYLSPEICENK 200
Query: 221 KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGD 280
+ D+++ G +L E+ T + E G K LV + G
Sbjct: 201 PYNNKSDIWALGCVLYELCTLKHAFE-------------------AGSMKNLVLKIISGS 241
Query: 281 FDENQLKQAINVAVLCVQ---SEPEKRPNMKEVV 311
F L + ++ L Q P RP++ ++
Sbjct: 242 FPPVSLHYSYDLRSLVSQLFKRNPRDRPSVNSIL 275
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 80.1 bits (196), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 81/308 (26%), Positives = 140/308 (45%), Gaps = 55/308 (17%)
Query: 32 TYKELHTATNGFSDDNK---------LGEGGFGSVYWGRTS----DGLQIAVKKLKA-MN 77
TY++ + A + F+ + + +G G FG V GR L +A+K LK
Sbjct: 4 TYEDPNQAVHEFAKEIEASCITIERVIGAGEFGEVCSGRLKLPGKRELPVAIKTLKVGYT 63
Query: 78 SKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQYAG 134
K +F E ++G+ H N++ L G + +IV +YM N SL + L GQ+
Sbjct: 64 EKQRRDFLGEASIMGQFDHPNIIHLEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQFT- 122
Query: 135 EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI 194
+QL R G + G+ YL +HRD+ A N+L++S+ V+DFG ++++
Sbjct: 123 VIQLVGMLR-----GISAGMKYLSDM---GYVHRDLAARNILINSNLVCKVSDFGLSRVL 174
Query: 195 ---PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
PE ++ T K + + APE + K + + DV+S+GI++ E+++ G +P ++
Sbjct: 175 EDDPEA-AYTTRGGKIPIRWTAPEAIAFRKFTSASDVWSYGIVMWEVVSYGERPYWEMTN 233
Query: 251 -GVKRTITE---WAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPN 306
V + + E P+ +L+ + C Q E RP
Sbjct: 234 QDVIKAVEEGYRLPSPMDCPAALYQLM--------------------LDCWQKERNSRPK 273
Query: 307 MKEVVNTL 314
E+VN L
Sbjct: 274 FDEIVNML 281
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 79.3 bits (194), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 60/204 (29%), Positives = 101/204 (49%), Gaps = 14/204 (6%)
Query: 49 LGEGGFGSVYWGRT----SDGLQIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+G G G V +GR + +A+K LKA + +F E ++G+ H N++ L
Sbjct: 57 IGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQRRDFLSEASIMGQFDHPNIIRLE 116
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G +IV +YM N SL + L + Q + + + G G+ YL
Sbjct: 117 GVVTRGRLAMIVTEYMENGSLDTFLRTH---DGQFTIMQLVGMLRGVGAGMRYLSDL--- 170
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE--GVSHMTTRVKGTLGYLAPEYAMWGK 221
+HRD+ A NVL+DS+ V+DFG ++++ + + TT K + + APE +
Sbjct: 171 GYVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDAAXTTTGGKIPIRWTAPEAIAFRT 230
Query: 222 VSESCDVYSFGILLLEILT-GRKP 244
S + DV+SFG+++ E+L G +P
Sbjct: 231 FSSASDVWSFGVVMWEVLAYGERP 254
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 79.0 bits (193), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 26/279 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
++G G FG V+ GR +D +AVK + + + +F E +L + H N++ L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
C IV + + L+ L + A +L K +++ +A G+ YL +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESKCC--- 234
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT-LGYLAPEYAMWGKVSE 224
IHRD+ A N L+ ++DFG ++ +GV + ++ + + APE +G+ S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 225 SCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDE 283
DV+SFGILL E + G P L R E K L P+L D
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE---------KGGRLPCPELCPDAVF 345
Query: 284 NQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
++Q C EP +RP+ + L R +
Sbjct: 346 RLMEQ-------CWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ ++ H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 112
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 222
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 275
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 276 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ ++ H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKLNHQNIVR 98
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 208
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 261
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 262 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 78.6 bits (192), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 65/236 (27%), Positives = 115/236 (48%), Gaps = 31/236 (13%)
Query: 31 FTYKELHTATNGFSDD---------NKLGEGGFGSVYWGRTS----DGLQIAVKKLKA-M 76
FT+++ + A F+ + +G G FG V G + +A+K LK+
Sbjct: 14 FTFEDPNEAVREFAKEIDISCVKIEQVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGY 73
Query: 77 NSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQYA 133
K +F E ++G+ H N++ L G + +I+ ++M N SL S L GQ+
Sbjct: 74 TEKQRRDFLSEASIMGQFDHPNVIHLEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT 133
Query: 134 GEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKL 193
+QL R G A G+ YL + +HRD+ A N+L++S+ V+DFG ++
Sbjct: 134 -VIQLVGMLR-----GIAAGMKYL---ADMNYVHRDLAARNILVNSNLVCKVSDFGLSRF 184
Query: 194 IPEGVSHMTTRV----KGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ + S T K + + APE + K + + DV+S+GI++ E+++ G +P
Sbjct: 185 LEDDTSDPTYTSALGGKIPIRWTAPEAIQYRKFTSASDVWSYGIVMWEVMSYGERP 240
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 49 LGEGGFGSVYWGRTS----DGLQIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+G G FG V GR + +A+K LKA K +F E ++G+ H N++ L
Sbjct: 22 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 81
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G +I+ +YM N SL + L + G + M IGS G+ YL
Sbjct: 82 GVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS--GMKYLSDM--- 135
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWG 220
+HRD+ A N+L++S+ V+DFG ++++ PE ++ T K + + APE +
Sbjct: 136 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGKIPIRWTAPEAIAYR 194
Query: 221 KVSESCDVYSFGILLLEILT-GRKP 244
K + + DV+S+GI++ E+++ G +P
Sbjct: 195 KFTSASDVWSYGIVMWEVMSYGERP 219
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 64/214 (29%), Positives = 97/214 (45%), Gaps = 14/214 (6%)
Query: 37 HTATNGFSDDNKLGEGGFGSVYWGRTSDG-LQIAVKKL-KAMNSK--AEMEFAVEVEVLG 92
H + F LG+G FG+VY R +A+K L K+ K E + E+E+
Sbjct: 19 HFTIDDFEIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIEIQA 78
Query: 93 RVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE 152
+ H N+L L Y + ++ +Y P L+ + D +R I A+
Sbjct: 79 HLHHPNILRLYNYFYDRRRIYLILEYAPR----GELYKELQKSCTFDEQRTATIMEELAD 134
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYL 212
++Y H + +IHRDIK N+LL E +ADFG++ P S + GTL YL
Sbjct: 135 ALMYCHGK---KVIHRDIKPENLLLGLKGELKIADFGWSVHAP---SLRRKTMCGTLDYL 188
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
PE +E D++ G+L E+L G P E
Sbjct: 189 PPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFE 222
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 65 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 124
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 125 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 181
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 182 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 234
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 235 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 287
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 288 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 326
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 78.6 bits (192), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKDLVSC 155
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDXXKK 208
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 257
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 258 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 78.2 bits (191), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 80/303 (26%), Positives = 129/303 (42%), Gaps = 44/303 (14%)
Query: 24 NNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKA 80
N RIF EL LG G FG+V+ W + ++I V +
Sbjct: 21 NKVLARIFKETELRKL-------KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSG 73
Query: 81 EMEFAVEVE---VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQYAG 134
F + +G + H +++ L G C G+ +L+ Y+P SLL H+ G
Sbjct: 74 RQSFQAVTDHMLAIGSLDHAHIVRLLGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGP 132
Query: 135 EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI 194
++ L+W + A+G+ YL ++HR++ A NVLL S + VADFG A L+
Sbjct: 133 QLLLNW------GVQIAKGMYYLEEH---GMVHRNLAARNVLLKSPSQVQVADFGVADLL 183
Query: 195 PEGVSHMT-TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
P + + K + ++A E +GK + DV+S+G+ + E++T G +P L
Sbjct: 184 PPDDKQLLYSEAKTPIKWMALESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGL---- 239
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
AE + K + L P++ V V C + RP KE+ N
Sbjct: 240 -----RLAEVPDLLEKGERLAQPQI-------CTIDVYMVMVKCWMIDENIRPTFKELAN 287
Query: 313 TLT 315
T
Sbjct: 288 EFT 290
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 62/205 (30%), Positives = 105/205 (51%), Gaps = 16/205 (7%)
Query: 49 LGEGGFGSVYWGRTS----DGLQIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+G G FG V GR + +A+K LKA K +F E ++G+ H N++ L
Sbjct: 16 IGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIHLE 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G +I+ +YM N SL + L + G + M IGS G+ YL
Sbjct: 76 GVVTKCKPVMIITEYMENGSLDAFLR-KNDGRFTVIQLVGMLRGIGS--GMKYLSDM--- 129
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWG 220
+HRD+ A N+L++S+ V+DFG ++++ PE ++ T K + + APE +
Sbjct: 130 SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEA-AYTTRGGKIPIRWTAPEAIAYR 188
Query: 221 KVSESCDVYSFGILLLEILT-GRKP 244
K + + DV+S+GI++ E+++ G +P
Sbjct: 189 KFTSASDVWSYGIVMWEVMSYGERP 213
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 112
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 113 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 222
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 275
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 276 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 208
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 261
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 262 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 55 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 114
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 115 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 171
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 172 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 224
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 225 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 277
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 278 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 316
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 74/279 (26%), Positives = 121/279 (43%), Gaps = 26/279 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
++G G FG V+ GR +D +AVK + + + +F E +L + H N++ L G
Sbjct: 121 QIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEARILKQYSHPNIVRLIGV 180
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
C IV + + L+ L + A +L K +++ +A G+ YL +
Sbjct: 181 CTQKQPIYIVMELVQGGDFLTFLRTEGA---RLRVKTLLQMVGDAAAGMEYLESKCC--- 234
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT-LGYLAPEYAMWGKVSE 224
IHRD+ A N L+ ++DFG ++ +GV + ++ + + APE +G+ S
Sbjct: 235 IHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQVPVKWTAPEALNYGRYSS 294
Query: 225 SCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDE 283
DV+SFGILL E + G P L R E K L P+L D
Sbjct: 295 ESDVWSFGILLWETFSLGASPYPNLSNQQTREFVE---------KGGRLPCPELCPDAVF 345
Query: 284 NQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
++Q C EP +RP+ + L R +
Sbjct: 346 RLMEQ-------CWAYEPGQRPSFSTIYQELQSIRKRHR 377
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 79 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 138
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 139 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 195
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLI-PEGVSHMTTRVKGTLGY 211
YL H IHRDI A N LL VA DFG A+ I G + +
Sbjct: 196 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 252
Query: 212 LAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFK 270
+ PE M G + D +SFG+LL EI + G P P + + E+ + G
Sbjct: 253 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTSGG-- 303
Query: 271 ELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
R D +N + C Q +PE RPN ++ +
Sbjct: 304 -------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 340
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 45 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 104
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 105 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 161
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 162 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 214
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 215 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 267
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 268 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 306
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 30 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 89
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 90 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 146
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 147 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 199
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 200 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 252
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 253 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 291
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 78.2 bits (191), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 77 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 136
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 137 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 196
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 197 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 249
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 250 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 298
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 299 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 347
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 98 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 207
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 260
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 261 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 28 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 87
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 88 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 147
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 148 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 200
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 201 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 249
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 250 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 298
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 38 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 97
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 98 CIGVSLQSLPRFILMELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 154
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 155 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 207
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 208 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 260
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 261 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 299
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 257
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 258 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 155
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 257
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 258 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 78.2 bits (191), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/284 (28%), Positives = 118/284 (41%), Gaps = 40/284 (14%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 56 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 115
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 116 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 172
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLI-PEGVSHMTTRVKGTLGY 211
YL H IHRDI A N LL VA DFG A+ I G + +
Sbjct: 173 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMARDIYRAGYYRKGGCAMLPVKW 229
Query: 212 LAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFK 270
+ PE M G + D +SFG+LL EI + G P P + + E+ + G
Sbjct: 230 MPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTSGG-- 280
Query: 271 ELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
R D +N + C Q +PE RPN ++ +
Sbjct: 281 -------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 317
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 39 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVCSEQDELDFLMEALIISKFNHQNIVR 98
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 99 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 155
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A + + + KG
Sbjct: 156 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMA----QDIYRASYYRKGGCAML 208
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 209 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 261
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 262 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 300
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 77.8 bits (190), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 25 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 84
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 85 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 144
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 145 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 197
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 198 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 246
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 247 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 295
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 49 LGEGGFGSVYWGRTS------DGLQIAVKKLKAMNSKA-EMEFAVEVEVLGRVRHKNLLG 101
LG G FG VY G+ S LQ+AVK L + S+ E++F +E ++ + H+N++
Sbjct: 53 LGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPEVYSEQDELDFLMEALIISKFNHQNIVR 112
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLH------GQYAGEVQLDWKRRMKIAIGSAEGIL 155
G + R I+ + M L S L Q + LD + +A A G
Sbjct: 113 CIGVSLQSLPRFILLELMAGGDLKSFLRETRPRPSQPSSLAMLDL---LHVARDIACGCQ 169
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVA---DFGFAKLIPEGVSHMTTRVKG----- 207
YL H IHRDI A N LL VA DFG A+ + + KG
Sbjct: 170 YLEEN---HFIHRDIAARNCLLTCPGPGRVAKIGDFGMAR----DIYRASYYRKGGCAML 222
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
+ ++ PE M G + D +SFG+LL EI + G P P + + E+ +
Sbjct: 223 PVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMP---YPSKSNQEVLEF----VTS 275
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
G R D +N + C Q +PE RPN ++ +
Sbjct: 276 GG---------RMDPPKNCPGPVYRIMTQCWQHQPEDRPNFAIILERI 314
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 21 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 80
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 81 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 140
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 141 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 193
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 194 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 242
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 243 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 291
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 29 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 88
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 89 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKDLVSC 148
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 149 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 201
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 202 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 250
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 251 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 299
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 77.8 bits (190), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 49 LGEGGFGSVYWGR-TSDGLQ---IAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+G G FG V GR + G + +A+K LK + EF E ++G+ H N++ L
Sbjct: 24 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 83
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLH---GQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G + +I+ ++M N +L S L GQ+ +QL + + G A G+ YL
Sbjct: 84 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFT-VIQL-----VGMLRGIASGMRYLAEM 137
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV----KGTLGYLAPEY 216
+HRD+ A N+L++S+ V+DFG ++ + E S T K + + APE
Sbjct: 138 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEA 194
Query: 217 AMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ K + + D +S+GI++ E+++ G +P
Sbjct: 195 IAFRKFTSASDAWSYGIVMWEVMSFGERP 223
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 81/295 (27%), Positives = 132/295 (44%), Gaps = 53/295 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + ++AVK LK+ ++ ++ + E+E++ + +HKN
Sbjct: 36 LGEGAFGQVVLAEAIGLDKDKPNRVTKVAVKMLKSDATEKDLSDLISEMEMMKMIGKHKN 95
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------------YAGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + + E QL K +
Sbjct: 96 IINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKDLVSC 155
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A A G+ YL + IHRD+ A NVL+ D +ADFG A+ + H+ K
Sbjct: 156 AYQVARGMEYL---ASKKCIHRDLAARNVLVTEDNVMKIADFGLAR----DIHHIDYYKK 208
Query: 207 GTLG-----YLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEW 259
T G ++APE A++ ++ + DV+SFG+LL EI T G P +P
Sbjct: 209 TTNGRLPVKWMAPE-ALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVP---------- 257
Query: 260 AEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 258 -----VEELFK-LLKEGHRMDKPSNCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 306
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/209 (29%), Positives = 106/209 (50%), Gaps = 22/209 (10%)
Query: 49 LGEGGFGSVYWGR-TSDGLQ---IAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+G G FG V GR + G + +A+K LK + EF E ++G+ H N++ L
Sbjct: 22 IGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIRLE 81
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLH---GQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G + +I+ ++M N +L S L GQ+ +QL + + G A G+ YL
Sbjct: 82 GVVTNSMPVMILTEFMENGALDSFLRLNDGQFT-VIQL-----VGMLRGIASGMRYLAEM 135
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV----KGTLGYLAPEY 216
+HRD+ A N+L++S+ V+DFG ++ + E S T K + + APE
Sbjct: 136 ---SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEA 192
Query: 217 AMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ K + + D +S+GI++ E+++ G +P
Sbjct: 193 IAFRKFTSASDAWSYGIVMWEVMSFGERP 221
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 49 LGEGGFGSVYWGRTS-DGLQI--AVKKLKAMNSKAE-MEFAVEVEVLGRV-RHKNLLGLR 103
+GEG FG V R DGL++ A+K++K SK + +FA E+EVL ++ H N++ L
Sbjct: 23 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 82
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIAIGSA 151
G C + +Y P+ +LL L E L ++ + A A
Sbjct: 83 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 142
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG- 210
G+ YL + IHRD+ A N+L+ ++ +ADFG ++ VK T+G
Sbjct: 143 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 192
Query: 211 ----YLAPEYAMWGKVSESCDVYSFGILLLEI----------LTGRKPIEKLPGGVK 253
++A E + + + DV+S+G+LL EI +T + EKLP G +
Sbjct: 193 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 249
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 77/277 (27%), Positives = 124/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 150
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVS-HMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + E S H T K + ++A E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVKWMALESLQT 210
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 262
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 263 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 37 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 96
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 97 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 150
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 151 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 210
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 211 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 262
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 263 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 292
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 49 LGEGGFGSVYWGRTS-DGLQI--AVKKLKAMNSKAE-MEFAVEVEVLGRV-RHKNLLGLR 103
+GEG FG V R DGL++ A+K++K SK + +FA E+EVL ++ H N++ L
Sbjct: 33 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 92
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIAIGSA 151
G C + +Y P+ +LL L E L ++ + A A
Sbjct: 93 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 152
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG- 210
G+ YL + IHRD+ A N+L+ ++ +ADFG ++ VK T+G
Sbjct: 153 RGMDYLSQK---QFIHRDLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 202
Query: 211 ----YLAPEYAMWGKVSESCDVYSFGILLLEI----------LTGRKPIEKLPGGVK 253
++A E + + + DV+S+G+LL EI +T + EKLP G +
Sbjct: 203 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 259
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 126/295 (42%), Gaps = 58/295 (19%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
+G GGFG V+ + DG ++++K N KAE E V+ L ++ H N++ G
Sbjct: 20 IGSGGFGQVFKAKHRIDGKTYVIRRVKYNNEKAERE----VKALAKLDHVNIVHYNGCWD 75
Query: 108 G-------TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDW-----------KRR------ 143
G +D L DY P S S +Q+++ KRR
Sbjct: 76 GFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLDK 135
Query: 144 ---MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH 200
+++ +G+ Y+H + +IHRD+K SN+ L + + DFG +
Sbjct: 136 VLALELFEQITKGVDYIH---SKKLIHRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 192
Query: 201 MTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWA 260
TR KGTL Y++PE + D+Y+ G++L E+L V T E +
Sbjct: 193 --TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL-----------HVCDTAFETS 239
Query: 261 EPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
+ F +L D + FD K+ + + +PE RPN E++ TLT
Sbjct: 240 KF------FTDLRDGIISDIFD----KKEKTLLQKLLSKKPEDRPNTSEILRTLT 284
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/278 (26%), Positives = 123/278 (44%), Gaps = 37/278 (13%)
Query: 49 LGEGGFGSVY---WGRTSDGLQIAVKKLKAMNSKAEMEFAVEVE---VLGRVRHKNLLGL 102
LG G FG+V+ W + ++I V + F + +G + H +++ L
Sbjct: 21 LGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIVRL 80
Query: 103 RGYCAGTDQRLIVYDYMPNLSLLSHLH---GQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
G C G+ +L+ Y+P SLL H+ G ++ L+W + A+G+ YL
Sbjct: 81 LGLCPGSSLQLVT-QYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYLEE 133
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAM 218
++HR++ A NVLL S + VADFG A L+P + + K + ++A E
Sbjct: 134 H---GMVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIKWMALESIH 190
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKL 277
+GK + DV+S+G+ + E++T G +P L AE + K + L P++
Sbjct: 191 FGKYTHQSDVWSYGVTVWELMTFGAEPYAGL---------RLAEVPDLLEKGERLAQPQI 241
Query: 278 RGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLT 315
V V C + RP KE+ N T
Sbjct: 242 -------CTIDVYMVMVKCWMIDENIRPTFKELANEFT 272
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 149
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 209
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 261
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 262 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 77.4 bits (189), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 33 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 92
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 93 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 146
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 147 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 206
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 207 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 258
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 259 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 288
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/223 (29%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 38 TATNGFSDDNKLGE----GGFGSVYWGRT-SDGLQIAVKKLKA---MNSKAEMEFAVEVE 89
T + SD +LGE GG V+ R D +AVK L+A + + F E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 90 VLGRVRHKNLLGLRGYCAGTDQR------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
+ H ++ + Y G + IV +Y+ ++L +H E + KR
Sbjct: 65 NAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRA 118
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHM-- 201
+++ + + + + H IIHRD+K +N+L+ + V DFG A+ I + + +
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANILISATNAVKVVDFGIARAIADSGNSVXQ 175
Query: 202 TTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
T V GT YL+PE A V DVYS G +L E+LTG P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 151
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 263
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 264 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 139/315 (44%), Gaps = 56/315 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRV 205
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 206 KGTLGYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ + ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-------------- 264
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGKV 323
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 -VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL--------- 313
Query: 324 MQTRIETLAYKEELL 338
RI TL EE L
Sbjct: 314 --DRILTLTTNEEYL 326
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 77.0 bits (188), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 151
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 263
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 264 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 30 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 89
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 90 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 143
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 144 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 203
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 204 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 255
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 256 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 285
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 35 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 94
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 95 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 148
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 149 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 208
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 209 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 260
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 261 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 290
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 57 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 116
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 117 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 170
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 171 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 230
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 231 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 282
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 283 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 312
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 84/315 (26%), Positives = 136/315 (43%), Gaps = 56/315 (17%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQY------------AGEVQLDWKRRMKI 146
++ L G C ++ +Y +L +L + E Q+ +K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE-GVSHMTTRV 205
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I TT
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTTNG 219
Query: 206 KGTLGYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ + ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 220 RLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP-------------- 264
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGKV 323
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 -VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL--------- 313
Query: 324 MQTRIETLAYKEELL 338
RI TL EE L
Sbjct: 314 --DRILTLTTNEEYL 326
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 75/277 (27%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 56 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 115
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ YL +
Sbjct: 116 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKYL---AS 169
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEG---VSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 170 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVKWMALESLQT 229
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 230 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 281
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 282 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 311
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKNTTN 218
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 264
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 313
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 314 ---DRILTLTTNEE 324
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 76.6 bits (187), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMRIADFGLARDI-NNIDYYKKTTN 218
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 264
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 313
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 314 ---DRILTLTTNEE 324
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ +L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---AS 152
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE---GVSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 264
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 265 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 264
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 313
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 314 ---DRILTLTTNEE 324
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 40/285 (14%)
Query: 49 LGEGGFGSVY------WGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V G+ L++AVK LK+ E E E++++ + +H+N++
Sbjct: 46 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 105
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ------LDWKRRMKIAIGSAEGI 154
L G C L++ +Y LL+ L + ++ L+ + + + A+G+
Sbjct: 106 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 165
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT----LG 210
+L + + IHRD+ A NVLL + + DFG A+ I +++ VKG +
Sbjct: 166 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPVK 219
Query: 211 YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKF 269
++APE + DV+S+GILL EI + G P PG ++V KF
Sbjct: 220 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPG------------ILVNSKF 264
Query: 270 KELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+LV + K ++ C EP RP +++ + L
Sbjct: 265 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 309
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/285 (26%), Positives = 128/285 (44%), Gaps = 40/285 (14%)
Query: 49 LGEGGFGSVY------WGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V G+ L++AVK LK+ E E E++++ + +H+N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ------LDWKRRMKIAIGSAEGI 154
L G C L++ +Y LL+ L + ++ L+ + + + A+G+
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGRPLELRDLLHFSSQVAQGM 173
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT----LG 210
+L + + IHRD+ A NVLL + + DFG A+ I +++ VKG +
Sbjct: 174 AFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARLPVK 227
Query: 211 YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKF 269
++APE + DV+S+GILL EI + G P PG ++V KF
Sbjct: 228 WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPG------------ILVNSKF 272
Query: 270 KELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+LV + K ++ C EP RP +++ + L
Sbjct: 273 YKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 317
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 43 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 102
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ +L +
Sbjct: 103 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---AS 156
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE---GVSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 157 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 216
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 217 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 268
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 269 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 298
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 76.3 bits (186), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 38 TATNGFSDDNKLGE----GGFGSVYWGRT-SDGLQIAVKKLKA---MNSKAEMEFAVEVE 89
T + SD +LGE GG V+ R D +AVK L+A + + F E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 90 VLGRVRHKNLLGLRGYCAGTDQR------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
+ H ++ + Y G + IV +Y+ ++L +H E + KR
Sbjct: 65 NAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRA 118
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMT- 202
+++ + + + + H IIHRD+K +N+++ + V DFG A+ I + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 203 -TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
V GT YL+PE A V DVYS G +L E+LTG P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 39 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 98
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ +L +
Sbjct: 99 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---AS 152
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE---GVSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 153 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVKWMALESLQT 212
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 213 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 264
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 265 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 294
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 64/223 (28%), Positives = 103/223 (46%), Gaps = 25/223 (11%)
Query: 38 TATNGFSDDNKLGE----GGFGSVYWGRT-SDGLQIAVKKLKA---MNSKAEMEFAVEVE 89
T + SD +LGE GG V+ R D +AVK L+A + + F E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRDHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 90 VLGRVRHKNLLGLRGYCAGTDQR------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
+ H ++ + Y G + IV +Y+ ++L +H E + KR
Sbjct: 65 NAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRA 118
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMT- 202
+++ + + + + H IIHRD+K +N+++ + V DFG A+ I + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 203 -TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
V GT YL+PE A V DVYS G +L E+LTG P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 43 FSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKL----KAMNSKAEMEFAVEVEVLGRVRHK 97
FSD ++G G FG+VY+ R + +A+KK+ K N K + + EV L ++RH
Sbjct: 17 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ-DIIKEVRFLQKLRHP 75
Query: 98 NLLGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
N + RG +V +Y + + S L +H + EV++ + G+ +G+ Y
Sbjct: 76 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAY 130
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
LH + ++IHRD+KA N+LL + DFG A ++ GT ++APE
Sbjct: 131 LH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEV 182
Query: 217 AMW---GKVSESCDVYSFGILLLEILTGRKPIEKLPG-GVKRTITEWAEPLIVKGKFKEL 272
+ G+ DV+S GI +E+ + P+ + I + P + G + E
Sbjct: 183 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 242
Query: 273 VDPKLRGDFDENQLKQAINVAVLCVQSEPEKRP 305
N C+Q P+ RP
Sbjct: 243 FR----------------NFVDSCLQKIPQDRP 259
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 36 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 95
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ +L +
Sbjct: 96 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---AS 149
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE---GVSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 150 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 209
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 210 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 261
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 262 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 291
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 75.9 bits (185), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 132/301 (43%), Gaps = 36/301 (11%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEM 82
+F E + + +LG+G FG VY G D ++ +AVK + S + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV 136
EF E V+ +++ L G + L+V + M + L S+L G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 137 QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE 196
+ +++A A+G+ YL+ + +HRD+ A N ++ DF + DFG + I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 197 GVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
++ KG L ++APE G + S D++SFG++L EI + +P + L
Sbjct: 183 -TAYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS---- 237
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
E ++ G + + D N ++ ++ +C Q P+ RP E+VN
Sbjct: 238 ---NEQVLKFVMDGGYLDQPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 314 L 314
L
Sbjct: 286 L 286
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---AS 151
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE---GVSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 263
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 264 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 72/273 (26%), Positives = 120/273 (43%), Gaps = 40/273 (14%)
Query: 43 FSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKL----KAMNSKAEMEFAVEVEVLGRVRHK 97
FSD ++G G FG+VY+ R + +A+KK+ K N K + + EV L ++RH
Sbjct: 56 FSDLREIGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQ-DIIKEVRFLQKLRHP 114
Query: 98 NLLGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
N + RG +V +Y + + S L +H + EV++ + G+ +G+ Y
Sbjct: 115 NTIQYRGCYLREHTAWLVMEYCLGSASDLLEVHKKPLQEVEI-----AAVTHGALQGLAY 169
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
LH + ++IHRD+KA N+LL + DFG A ++ GT ++APE
Sbjct: 170 LH---SHNMIHRDVKAGNILLSEPGLVKLGDFGSASIMAPA-----NXFVGTPYWMAPEV 221
Query: 217 AMW---GKVSESCDVYSFGILLLEILTGRKPIEKLPG-GVKRTITEWAEPLIVKGKFKEL 272
+ G+ DV+S GI +E+ + P+ + I + P + G + E
Sbjct: 222 ILAMDEGQYDGKVDVWSLGITCIELAERKPPLFNMNAMSALYHIAQNESPALQSGHWSEY 281
Query: 273 VDPKLRGDFDENQLKQAINVAVLCVQSEPEKRP 305
N C+Q P+ RP
Sbjct: 282 FR----------------NFVDSCLQKIPQDRP 298
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 66/211 (31%), Positives = 95/211 (45%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLK---AMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V+ R+ +G A+K LK + K E +L V H ++ + G
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQ----------YAGEVQLDWKRRMKIAIGSAEGI 154
Q ++ DY+ L S L YA EV L +
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLLRKSQRFPNPVAKFYAAEVCL--------------AL 119
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + II+RD+K N+LLD + + DFGFAK +P+ +T + GT Y+AP
Sbjct: 120 EYLH---SKDIIYRDLKPENILLDKNGHIKITDFGFAKYVPD----VTYXLCGTPDYIAP 172
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E ++S D +SFGIL+ E+L G P
Sbjct: 173 EVVSTKPYNKSIDWWSFGILIYEMLAGYTPF 203
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 75/259 (28%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 16 GLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AV 70
G+ + PN A RI E F LG G FG+VY W + ++I A+
Sbjct: 4 GIRSGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 56
Query: 71 KKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K+L+ A + KA E E V+ V + ++ L G C + +LI MP LL ++
Sbjct: 57 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR 115
Query: 129 -HGQYAG-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVA 186
H G + L+W + A+G+ YL ++HRD+ A NVL+ + +
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 166
Query: 187 DFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
DFG AKL+ E + K + ++A E + + DV+S+G+ + E++T G KP
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 245 IEKLPGGVKRTITEWAEPL 263
+ +P +I E E L
Sbjct: 227 YDGIPASEISSILEKGERL 245
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 38 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 97
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ +L +
Sbjct: 98 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---AS 151
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE---GVSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 152 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 211
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 212 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 263
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 264 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 293
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 75.9 bits (185), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 94
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 95 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 154
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 155 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 210
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 211 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 256
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 257 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 305
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 306 ---DRILTLTTNEE 316
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 264
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 313
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 314 ---DRILTLTTNEE 324
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 49 LGEGGFGSVYWGRTS-DGLQI--AVKKLKAMNSKAE-MEFAVEVEVLGRV-RHKNLLGLR 103
+GEG FG V R DGL++ A+K++K SK + +FA E+EVL ++ H N++ L
Sbjct: 30 IGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIINLL 89
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIAIGSA 151
G C + +Y P+ +LL L E L ++ + A A
Sbjct: 90 GACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAADVA 149
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG- 210
G+ YL + IHR++ A N+L+ ++ +ADFG ++ VK T+G
Sbjct: 150 RGMDYLSQK---QFIHRNLAARNILVGENYVAKIADFGLSR-------GQEVYVKKTMGR 199
Query: 211 ----YLAPEYAMWGKVSESCDVYSFGILLLEI----------LTGRKPIEKLPGGVK 253
++A E + + + DV+S+G+LL EI +T + EKLP G +
Sbjct: 200 LPVRWMAIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQGYR 256
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 75.5 bits (184), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 74/277 (26%), Positives = 123/277 (44%), Gaps = 30/277 (10%)
Query: 49 LGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLR 103
+G G FG VY G D + AVK L + E+ +F E ++ H N+L L
Sbjct: 97 IGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLSLL 156
Query: 104 GYCAGTD-QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G C ++ L+V YM + L + + + D + + A+G+ +L +
Sbjct: 157 GICLRSEGSPLVVLPYMKHGDLRNFIRNETHNPTVKDL---IGFGLQVAKGMKFL---AS 210
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE---GVSHMTTRVKGTLGYLAPEYAMW 219
+HRD+ A N +LD F VADFG A+ + + H T K + ++A E
Sbjct: 211 KKFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVKWMALESLQT 270
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
K + DV+SFG+LL E++T P P IT + +++G + L+ P+
Sbjct: 271 QKFTTKSDVWSFGVLLWELMTRGAP--PYPDVNTFDITVY----LLQG--RRLLQPEYCP 322
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTG 316
D V + C + E RP+ E+V+ ++
Sbjct: 323 D-------PLYEVMLKCWHPKAEMRPSFSELVSRISA 352
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 131/301 (43%), Gaps = 36/301 (11%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEM 82
+F E + + +LG+G FG VY G D ++ +AVK + S + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV 136
EF E V+ +++ L G + L+V + M + L S+L G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 137 QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE 196
+ +++A A+G+ YL+ + +HRD+ A N ++ DF + DFG + I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE 182
Query: 197 GVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+ KG L ++APE G + S D++SFG++L EI + +P + L
Sbjct: 183 -TDYYRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS---- 237
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
E ++ G + + D N ++ ++ +C Q P+ RP E+VN
Sbjct: 238 ---NEQVLKFVMDGGYLDQPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 314 L 314
L
Sbjct: 286 L 286
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 91
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 92 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 151
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 152 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 207
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 208 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 253
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 254 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 302
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 303 ---DRILTLTTNEE 313
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 77/292 (26%), Positives = 132/292 (45%), Gaps = 47/292 (16%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 89
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 90 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 149
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 150 TYQLARGMEYLASQ---KCIHRDLTARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 205
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 206 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 251
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 252 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL 300
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 264
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 313
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 314 ---DRILTLTTNEE 324
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 3 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++ H
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 114
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 115 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 226 SEISSILEKGERL 238
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 75.5 bits (184), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 4 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 56
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++ H
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 115
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 116 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 167 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 226
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 227 SEISSILEKGERL 239
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 5 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++ H
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 116
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 117 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 228 SEISSILEKGERL 240
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 6 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQY 132
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 117
Query: 133 AGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
+ L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 118 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 169 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 229 SEISSILEKGERL 241
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 138/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 148
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ +Y +L +L +Y+ ++ Q+ +K +
Sbjct: 149 IINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 208
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 209 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 264
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 265 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 310
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 311 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 359
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 360 ---DRILTLTTNEE 370
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 75.1 bits (183), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 7 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 59
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQY 132
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++
Sbjct: 60 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 118
Query: 133 AGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
+ L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 119 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 169
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 170 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 229
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 230 SEISSILEKGERL 242
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 36/301 (11%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEM 82
+F E + + +LG+G FG VY G D ++ +AVK + S + +
Sbjct: 6 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 65
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV 136
EF E V+ +++ L G + L+V + M + L S+L G
Sbjct: 66 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 125
Query: 137 QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE 196
+ +++A A+G+ YL+ + +HRD+ A N ++ DF + DFG + I E
Sbjct: 126 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 182
Query: 197 GVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
KG L ++APE G + S D++SFG++L EI + +P + L
Sbjct: 183 -TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS---- 237
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
E ++ G + + D N ++ ++ +C Q P+ RP E+VN
Sbjct: 238 ---NEQVLKFVMDGGYLDQPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNL 285
Query: 314 L 314
L
Sbjct: 286 L 286
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 13 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 65
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 66 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 124
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 125 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 175
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 176 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 235
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 236 SEISSILEKGERL 248
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKL--KAMNSK--AEMEFAVEVEVLGRVRH 96
+ F LG+G FG+VY R I K+ K+ K E + E+E+ +RH
Sbjct: 15 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 74
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGI 154
N+L + Y + ++ ++ P L L HG++ D +R A+ +
Sbjct: 75 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF------DEQRSATFMEELADAL 128
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H +IHRDIK N+L+ E +ADFG++ P S + GTL YL P
Sbjct: 129 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPP 182
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++ G+L E L G P +
Sbjct: 183 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 214
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 46/291 (15%)
Query: 49 LGEGGFGSVY------WGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V G+ L++AVK LK+ E E E++++ + +H+N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHL------------HGQYAGEVQLDWKRRMKIAI 148
L G C L++ +Y LL+ L + + E QL + + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHFSS 173
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT 208
A+G+ +L + + IHRD+ A NVLL + + DFG A+ I +++ VKG
Sbjct: 174 QVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGN 227
Query: 209 ----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ ++APE + DV+S+GILL EI + G P PG +
Sbjct: 228 ARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPG------------I 272
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+V KF +LV + K ++ C EP RP +++ + L
Sbjct: 273 LVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 323
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 126/283 (44%), Gaps = 36/283 (12%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEMEFAVEVEVLGRVRHKNLL 100
+LG+G FG VY G D ++ +AVK + S + +EF E V+ +++
Sbjct: 23 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 82
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEVQLDWKRRMKIAIGSAEGI 154
L G + L+V + M + L S+L G + +++A A+G+
Sbjct: 83 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 142
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG--YL 212
YL+ + +HRD+ A N ++ DF + DFG + I E + KG L ++
Sbjct: 143 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWM 198
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
APE G + S D++SFG++L EI + +P + L E ++ G + +
Sbjct: 199 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-------NEQVLKFVMDGGYLD 251
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
D N ++ ++ +C Q P+ RP E+VN L
Sbjct: 252 QPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNLL 285
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 264
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 313
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 314 ---DRILTLTTNEE 324
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 62/212 (29%), Positives = 96/212 (45%), Gaps = 18/212 (8%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKL-KAMNSK--AEMEFAVEVEVLGRVRH 96
+ F LG+G FG+VY R + +A+K L K+ K E + E+E+ +RH
Sbjct: 14 DDFDIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGI 154
N+L + Y + ++ ++ P L L HG++ D +R A+ +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF------DEQRSATFMEELADAL 127
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H +IHRDIK N+L+ E +ADFG++ P S + GTL YL P
Sbjct: 128 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPP 181
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++ G+L E L G P +
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 4 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 56
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++ H
Sbjct: 57 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGXLLDYVREHKDNI 115
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 116 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 166
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 167 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 226
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 227 SEISSILEKGERL 239
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 75.1 bits (183), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 3 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 115 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 226 SEISSILEKGERL 238
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 6 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 117
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 118 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 169 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 229 SEISSILEKGERL 241
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 115/253 (45%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 28 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 80
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQY 132
+ KA E E V+ V + ++ L G C + +LI MP LL ++
Sbjct: 81 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 139
Query: 133 AGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
+ L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 140 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 190
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 191 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 250
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 251 SEISSILEKGERL 263
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 75.1 bits (183), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 130/301 (43%), Gaps = 36/301 (11%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEM 82
+F E + + +LG+G FG VY G D ++ +AVK + S + +
Sbjct: 3 VFVPDEWEVSREKITLLRELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERI 62
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV 136
EF E V+ +++ L G + L+V + M + L S+L G
Sbjct: 63 EFLNEASVMKGFTCHHVVRLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRP 122
Query: 137 QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE 196
+ +++A A+G+ YL+ + +HRD+ A N ++ DF + DFG + I E
Sbjct: 123 PPTLQEMIQMAAEIADGMAYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE 179
Query: 197 GVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
KG L ++APE G + S D++SFG++L EI + +P + L
Sbjct: 180 -TDXXRKGGKGLLPVRWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS---- 234
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
E ++ G + + D N ++ ++ +C Q P+ RP E+VN
Sbjct: 235 ---NEQVLKFVMDGGYLDQPD---------NCPERVTDLMRMCWQFNPKMRPTFLEIVNL 282
Query: 314 L 314
L
Sbjct: 283 L 283
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 83/314 (26%), Positives = 137/314 (43%), Gaps = 58/314 (18%)
Query: 49 LGEGGFGSVYWG--------RTSDGLQIAVKKLKAMNSKAEM-EFAVEVEVLGRV-RHKN 98
LGEG FG V + + + +AVK LK ++ ++ + E+E++ + +HKN
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEKDLSDLVSEMEMMKMIGKHKN 102
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEV------QLDWKRRMKI 146
++ L G C ++ Y +L +L +Y+ ++ Q+ +K +
Sbjct: 103 IINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLVSC 162
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
A G+ YL + IHRD+ A NVL+ + +ADFG A+ I + +
Sbjct: 163 TYQLARGMEYLASQ---KCIHRDLAARNVLVTENNVMKIADFGLARDI-NNIDYYKKTTN 218
Query: 207 GTL--GYLAPEYAMWGKV-SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
G L ++APE A++ +V + DV+SFG+L+ EI T G P +P
Sbjct: 219 GRLPVKWMAPE-ALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIP------------- 264
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
V+ FK L+ R D N + + C + P +RP K++V L
Sbjct: 265 --VEELFK-LLKEGHRMDKPANCTNELYMMMRDCWHAVPSQRPTFKQLVEDL-------- 313
Query: 323 VMQTRIETLAYKEE 336
RI TL EE
Sbjct: 314 ---DRILTLTTNEE 324
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 5 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 116
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 117 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 167
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 228 SEISSILEKGERL 240
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 6 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 117
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 118 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 169 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 229 SEISSILEKGERL 241
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 3 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 115 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 226 SEISSILEKGERL 238
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 74.7 bits (182), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 6 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 58
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 59 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 117
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 118 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 168
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 169 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 228
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 229 SEISSILEKGERL 241
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 9 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 61
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 62 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 120
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 121 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 171
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 172 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 231
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 232 SEISSILEKGERL 244
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 93/212 (43%), Gaps = 18/212 (8%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKL--KAMNSK--AEMEFAVEVEVLGRVRH 96
+ F LG+G FG+VY R I K+ K+ K E + E+E+ +RH
Sbjct: 14 DDFDIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIEIQSHLRH 73
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGI 154
N+L + Y + ++ ++ P L L HG++ D +R A+ +
Sbjct: 74 PNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKHGRF------DEQRSATFMEELADAL 127
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H +IHRDIK N+L+ E +ADFG++ P S + GTL YL P
Sbjct: 128 HYCHER---KVIHRDIKPENLLMGYKGELKIADFGWSVHAP---SLRRRXMCGTLDYLPP 181
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
E E D++ G+L E L G P +
Sbjct: 182 EMIEGKTHDEKVDLWCAGVLCYEFLVGMPPFD 213
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 49 LGEGGFGSVYWGRTSDGLQI-AVKKLKA----MNSKAEMEFAVEVEVLGRV-RHKNLLGL 102
LG+G FG V+ Q A+K LK M+ E VE VL H L +
Sbjct: 26 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT-MVEKRVLSLAWEHPFLTHM 84
Query: 103 RGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ V +Y+ L+ H+ + + D R A G+ +LH +
Sbjct: 85 FCTFQTKENLFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLH---S 137
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
I++RD+K N+LLD D +ADFG K G + T GT Y+APE + K
Sbjct: 138 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNEFCGTPDYIAPEILLGQKY 196
Query: 223 SESCDVYSFGILLLEILTGRKPI-----EKLPGGVK-------RTITEWAEPLIVKGKFK 270
+ S D +SFG+LL E+L G+ P E+L ++ R + + A+ L+VK +
Sbjct: 197 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 256
Query: 271 ELVDPK----LRGDFDENQLKQAINVAVLCVQS-EPEKRPNMK 308
E P+ +RGD ++ L + IN L + +P RP +K
Sbjct: 257 E---PEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 296
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 3 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGXLLDYVREHKDNI 114
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 115 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 226 SEISSILEKGERL 238
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 74.7 bits (182), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 22/209 (10%)
Query: 49 LGEGGFGSVYWGRTS----DGLQIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLGLR 103
+G G FG V G + +A+K LK+ K +F E ++G+ H N++ L
Sbjct: 15 IGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIHLE 74
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLH---GQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G + +I+ ++M N SL S L GQ+ +QL R G A G+ YL
Sbjct: 75 GVVTKSTPVMIITEFMENGSLDSFLRQNDGQFT-VIQLVGMLR-----GIAAGMKYL--- 125
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV----KGTLGYLAPEY 216
+ +HR + A N+L++S+ V+DFG ++ + + S T K + + APE
Sbjct: 126 ADMNYVHRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEA 185
Query: 217 AMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ K + + DV+S+GI++ E+++ G +P
Sbjct: 186 IQYRKFTSASDVWSYGIVMWEVMSYGERP 214
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/259 (28%), Positives = 118/259 (45%), Gaps = 28/259 (10%)
Query: 16 GLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AV 70
G+ + PN A RI E F LG G FG+VY W + ++I A+
Sbjct: 4 GIRSGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAI 56
Query: 71 KKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH 129
K+L+ A + KA E E V+ V + ++ L G C + +LI MP LL ++
Sbjct: 57 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR 115
Query: 130 ---GQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVA 186
+ L+W + A+G+ YL ++HRD+ A NVL+ + +
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 166
Query: 187 DFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
DFG AKL+ E + K + ++A E + + DV+S+G+ + E++T G KP
Sbjct: 167 DFGRAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 245 IEKLPGGVKRTITEWAEPL 263
+ +P +I E E L
Sbjct: 227 YDGIPASEISSILEKGERL 245
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 74.3 bits (181), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/283 (25%), Positives = 124/283 (43%), Gaps = 36/283 (12%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEMEFAVEVEVLGRVRHKNLL 100
+LG+G FG VY G D ++ +AVK + S + +EF E V+ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEVQLDWKRRMKIAIGSAEGI 154
L G + L+V + M + L S+L G + +++A A+G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG--YL 212
YL+ + +HRD+ A N ++ DF + DFG + I E KG L ++
Sbjct: 144 AYLNAK---KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXE-TDXXRKGGKGLLPVRWM 199
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
APE G + S D++SFG++L EI + +P + L E ++ G + +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-------NEQVLKFVMDGGYLD 252
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
D N ++ ++ +C Q P RP E+VN L
Sbjct: 253 QPD---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 74.3 bits (181), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 83/283 (29%), Positives = 127/283 (44%), Gaps = 35/283 (12%)
Query: 49 LGEGGFGSVYWGRTSDGLQI-AVKKLKA----MNSKAEMEFAVEVEVLGRV-RHKNLLGL 102
LG+G FG V+ Q A+K LK M+ E VE VL H L +
Sbjct: 25 LGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECT-MVEKRVLSLAWEHPFLTHM 83
Query: 103 RGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ V +Y+ L+ H+ + + D R A G+ +LH +
Sbjct: 84 FCTFQTKENLFFVMEYLNGGDLMYHIQSCH----KFDLSRATFYAAEIILGLQFLH---S 136
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
I++RD+K N+LLD D +ADFG K G + T GT Y+APE + K
Sbjct: 137 KGIVYRDLKLDNILLDKDGHIKIADFGMCKENMLGDAK-TNXFCGTPDYIAPEILLGQKY 195
Query: 223 SESCDVYSFGILLLEILTGRKPI-----EKLPGGVK-------RTITEWAEPLIVKGKFK 270
+ S D +SFG+LL E+L G+ P E+L ++ R + + A+ L+VK +
Sbjct: 196 NHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKDLLVKLFVR 255
Query: 271 ELVDPK----LRGDFDENQLKQAINVAVLCVQS-EPEKRPNMK 308
E P+ +RGD ++ L + IN L + +P RP +K
Sbjct: 256 E---PEKRLGVRGDIRQHPLFREINWEELERKEIDPPFRPKVK 295
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/259 (28%), Positives = 120/259 (46%), Gaps = 28/259 (10%)
Query: 16 GLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AV 70
G+ + PN A RI E F L G FG+VY W + ++I A+
Sbjct: 4 GIRSGEAPNQALLRILKETE-------FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAI 56
Query: 71 KKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K+L+ A + KA E E V+ V + ++ L G C + +LI+ MP LL ++
Sbjct: 57 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVR 115
Query: 129 -HGQYAG-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVA 186
H G + L+W + A+G+ YL ++HRD+ A NVL+ + +
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 166
Query: 187 DFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
DFG AKL+ E + K + ++A E + + DV+S+G+ + E++T G KP
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 245 IEKLPGGVKRTITEWAEPL 263
+ +P +I E E L
Sbjct: 227 YDGIPASEISSILEKGERL 245
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/247 (29%), Positives = 118/247 (47%), Gaps = 22/247 (8%)
Query: 43 FSDDNKLGEGGFGSVYWGRT-SDGLQIAVKKL--KAMNSKAEMEFAV--EVEVLGRVRHK 97
F N LG+G F VY + GL++A+K + KAM KA M V EV++ +++H
Sbjct: 13 FKVGNLLGKGSFAGVYRAESIHTGLEVAIKMIDKKAM-YKAGMVQRVQNEVKIHCQLKHP 71
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
++L L Y ++ +V + N + +L + + + + M I G+LYL
Sbjct: 72 SILELYNYFEDSNYVYLVLEMCHNGEMNRYLKNRVKPFSENEARHFMHQII---TGMLYL 128
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEY 216
H + I+HRD+ SN+LL + +ADFG A +L H T + GT Y++PE
Sbjct: 129 H---SHGILHRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYT--LCGTPNYISPEI 183
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTIT-----EWAEPLIVKGKFKE 271
A DV+S G + +L GR P + VK T+ ++ P + + K+
Sbjct: 184 ATRSAHGLESDVWSLGCMFYTLLIGRPPFDT--DTVKNTLNKVVLADYEMPSFLSIEAKD 241
Query: 272 LVDPKLR 278
L+ LR
Sbjct: 242 LIHQLLR 248
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 7 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 59
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++ H
Sbjct: 60 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 118
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 119 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 169
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 170 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 229
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 230 SEISSILEKGERL 242
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 5 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++ H
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 116
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 117 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 228 SEISSILEKGERL 240
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 84/313 (26%), Positives = 135/313 (43%), Gaps = 46/313 (14%)
Query: 21 TTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWG-RTSDG----LQIAVKKLKA 75
PN A RI EL LG G FG+VY G DG + +A+K L+
Sbjct: 4 AAPNQALLRILKETELRKV-------KVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRE 56
Query: 76 MNS-KAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH---GQ 131
S KA E E V+ V + L G C + +L+ MP LL H+ G+
Sbjct: 57 NTSPKANKEILDEAYVMAGVGSPYVSRLLGICLTSTVQLVT-QLMPYGCLLDHVRENRGR 115
Query: 132 YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFA 191
+ L+W ++ A+G+ YL ++HRD+ A NVL+ S + DFG A
Sbjct: 116 LGSQDLLNWCMQI------AKGMSYLEDV---RLVHRDLAARNVLVKSPNHVKITDFGLA 166
Query: 192 KLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLP 249
+L+ + + K + ++A E + + + DV+S+G+ + E++T G KP + +P
Sbjct: 167 RLLDIDETEYHADGGKVPIKWMALESILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIP 226
Query: 250 GGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKE 309
R I + E K + L P + + V C + E RP +E
Sbjct: 227 A---REIPDLLE------KGERLPQPPI-------CTIDVYMIMVKCWMIDSECRPRFRE 270
Query: 310 VVNTLT--GYDPR 320
+V+ + DP+
Sbjct: 271 LVSEFSRMARDPQ 283
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 118/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 5 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI+ MP LL ++ H
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIM-QLMPFGCLLDYVREHKDNI 116
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 117 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 228 SEISSILEKGERL 240
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 127/279 (45%), Gaps = 27/279 (9%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHK 97
F + K+G G F VY DG+ +A+KK++ M++KA + E+++L ++ H
Sbjct: 33 NFRIEKKIGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHP 92
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKR---RMKIAIGSAEGI 154
N++ ++ IV + + + LS + + + +L +R + + + SA
Sbjct: 93 NVIKYYASFIEDNELNIVLE-LADAGDLSRMIKHFKKQKRLIPERTVWKYFVQLCSA--- 148
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
L H + ++HRDIK +NV + + + D G + + + V GT Y++P
Sbjct: 149 --LEHMHSRRVMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLV-GTPYYMSP 205
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVD 274
E + D++S G LL E+ + P G K + + K ++
Sbjct: 206 ERIHENGYNFKSDIWSLGCLLYEMAALQSPFY----GDKMNLYSLCK------KIEQCDY 255
Query: 275 PKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
P L D +L+Q +N +C+ +PEKRP++ V +
Sbjct: 256 PPLPSDHYSEELRQLVN---MCINPDPEKRPDVTYVYDV 291
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 5 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 57
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 58 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 116
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 117 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 167
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 168 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 227
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 228 SEISSILEKGERL 240
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 73.9 bits (180), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 58/297 (19%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG+G FG V R + D A+KK++ K + EV +L + H+ ++ R Y A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVV--RYYAA 70
Query: 108 GTDQR---------------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE 152
++R I +Y N +L +H + + + ++ R + + E
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---E 127
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE-------------GVS 199
+ Y+H + IIHRD+K N+ +D + DFG AK + G S
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 200 HMTTRVKGTLGYLAPEYAM-WGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITE 258
T GT Y+A E G +E D+YS GI+ E+ I G++R
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM------IYPFSTGMERV--- 235
Query: 259 WAEPLIVKGKFKEL--VDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
K+L V + DFD+N++K + L + +P KRP + ++N+
Sbjct: 236 --------NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 72/259 (27%), Positives = 117/259 (45%), Gaps = 28/259 (10%)
Query: 16 GLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AV 70
G+ + PN A RI E F L G FG+VY W + ++I A+
Sbjct: 4 GIRSGEAPNQALLRILKETE-------FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAI 56
Query: 71 KKLK-AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH 129
K+L+ A + KA E E V+ V + ++ L G C + +LI MP LL ++
Sbjct: 57 KELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVR 115
Query: 130 ---GQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVA 186
+ L+W + A+G+ YL ++HRD+ A NVL+ + +
Sbjct: 116 EHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKIT 166
Query: 187 DFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
DFG AKL+ E + K + ++A E + + DV+S+G+ + E++T G KP
Sbjct: 167 DFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKP 226
Query: 245 IEKLPGGVKRTITEWAEPL 263
+ +P +I E E L
Sbjct: 227 YDGIPASEISSILEKGERL 245
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/253 (29%), Positives = 117/253 (46%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F LG G FG+VY W + ++I A+K+L+ A
Sbjct: 3 APNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 115 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGRAK 165
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 226 SEISSILEKGERL 238
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 32/261 (12%)
Query: 67 QIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPN---L 122
++A+K++ + M E E++ + + H N++ D+ +V + L
Sbjct: 42 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 101
Query: 123 SLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSD 180
++ H+ G++ V LD I EG+ YLH IHRD+KA N+LL D
Sbjct: 102 DIIKHIVAKGEHKSGV-LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 157
Query: 181 FEPLVADFGFAKLIPEGVSHMTTRVK----GTLGYLAPEYAMWGKVSE-SCDVYSFGILL 235
+ADFG + + G +V+ GT ++APE + + D++SFGI
Sbjct: 158 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 217
Query: 236 LEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL-----KQAI 290
+E+ TG P K P +T +P P L + ++ K
Sbjct: 218 IELATGAAPYHKYPPMKVLMLTLQNDP------------PSLETGVQDKEMLKKYGKSFR 265
Query: 291 NVAVLCVQSEPEKRPNMKEVV 311
+ LC+Q +PEKRP E++
Sbjct: 266 KMISLCLQKDPEKRPTAAELL 286
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/264 (28%), Positives = 118/264 (44%), Gaps = 28/264 (10%)
Query: 11 EKVEEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQ 67
E VE + PN A RI E F LG G FG+VY W + ++
Sbjct: 26 ELVEPLTPSGEAPNQALLRILKETE-------FKKIKVLGSGAFGTVYKGLWIPEGEKVK 78
Query: 68 IAVKKLK---AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSL 124
I V ++ A + KA E E V+ V + ++ L G C + +LI MP L
Sbjct: 79 IPVAIMELREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCL 137
Query: 125 LSHL--HGQYAG-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDF 181
L ++ H G + L+W + A+G+ YL ++HRD+ A NVL+ +
Sbjct: 138 LDYVREHKDNIGSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQ 188
Query: 182 EPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT 240
+ DFG AKL+ E + K + ++A E + + DV+S+G+ + E++T
Sbjct: 189 HVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMT 248
Query: 241 -GRKPIEKLPGGVKRTITEWAEPL 263
G KP + +P +I E E L
Sbjct: 249 FGSKPYDGIPASEISSILEKGERL 272
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 73.6 bits (179), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/261 (25%), Positives = 113/261 (43%), Gaps = 32/261 (12%)
Query: 67 QIAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPN---L 122
++A+K++ + M E E++ + + H N++ D+ +V + L
Sbjct: 37 KVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYTSFVVKDELWLVMKLLSGGSVL 96
Query: 123 SLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSD 180
++ H+ G++ V LD I EG+ YLH IHRD+KA N+LL D
Sbjct: 97 DIIKHIVAKGEHKSGV-LDESTIATILREVLEGLEYLHKNGQ---IHRDVKAGNILLGED 152
Query: 181 FEPLVADFGFAKLIPEGVSHMTTRVK----GTLGYLAPEYAMWGKVSE-SCDVYSFGILL 235
+ADFG + + G +V+ GT ++APE + + D++SFGI
Sbjct: 153 GSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVMEQVRGYDFKADIWSFGITA 212
Query: 236 LEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQL-----KQAI 290
+E+ TG P K P +T +P P L + ++ K
Sbjct: 213 IELATGAAPYHKYPPMKVLMLTLQNDP------------PSLETGVQDKEMLKKYGKSFR 260
Query: 291 NVAVLCVQSEPEKRPNMKEVV 311
+ LC+Q +PEKRP E++
Sbjct: 261 KMISLCLQKDPEKRPTAAELL 281
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 75/287 (26%), Positives = 127/287 (44%), Gaps = 40/287 (13%)
Query: 49 LGEGGFGSVY------WGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V G+ L++AVK LK+ E E E++++ + +H+N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G C L++ +Y LL+ L + + ++ D + + S +L+ +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRK-SRVLETDPAFAIANSTASTRDLLHFSSQ 172
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT---- 208
V + + IHRD+ A NVLL + + DFG A+ I +++ VKG
Sbjct: 173 VAQGMAFLASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNARLP 229
Query: 209 LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKG 267
+ ++APE + DV+S+GILL EI + G P PG ++V
Sbjct: 230 VKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPG------------ILVNS 274
Query: 268 KFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
KF +LV + K ++ C EP RP +++ + L
Sbjct: 275 KFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 38 TATNGFSDDNKLGE----GGFGSVYWGRTSD-GLQIAVKKLKA---MNSKAEMEFAVEVE 89
T + SD +LGE GG V+ R +AVK L+A + + F E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 90 VLGRVRHKNLLGLRGYCAGTDQR------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
+ H ++ + Y G + IV +Y+ ++L +H E + KR
Sbjct: 65 NAAALNHPAIVAV--YATGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRA 118
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMT- 202
+++ + + + + H IIHRD+K +N+++ + V DFG A+ I + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 203 -TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
V GT YL+PE A V DVYS G +L E+LTG P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 48 KLGEGGFGSVYWGR----TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG+G FG V G + + +AVK LK +A +F EV + + H+NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G +++ + P SLL L ++ G L R + + AEG+ YL
Sbjct: 79 RLYGVVLTPPMKMVT-ELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQV--AEGMGYLE-- 132
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAM 218
+ IHRD+ A N+LL + + DFG + +P+ H M K + APE
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG-VKRTITEWAEPLIVKGKFKELVDPK 276
S + D + FG+ L E+ T G++P L G + I + E L P+
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------PR 240
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDP 319
E+ + NV V C +PE RP + + L P
Sbjct: 241 -----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 278
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 112/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ L++HL G D + +K S + I Y ++
Sbjct: 105 GINDII-----RAPTIEQMKDVYLVTHLMGA-------DLYKLLKTQHLSNDHICYFLYQ 152
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 250
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 48 KLGEGGFGSVYWGR----TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG+G FG V G + + +AVK LK +A +F EV + + H+NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G +++ + P SLL L ++ G L R + + AEG+ YL
Sbjct: 85 RLYGVVLTPPMKMVT-ELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQV--AEGMGYLE-- 138
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAM 218
+ IHRD+ A N+LL + + DFG + +P+ H M K + APE
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 197
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG-VKRTITEWAEPLIVKGKFKELVDPK 276
S + D + FG+ L E+ T G++P L G + I + E L P+
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------PR 246
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDP 319
E+ + NV V C +PE RP + + L P
Sbjct: 247 -----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 73.2 bits (178), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 96/211 (45%), Gaps = 24/211 (11%)
Query: 49 LGEGGFGSVYWGRTSDG--------LQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
LG G +G V+ R G +++ K +K E +VL +R L
Sbjct: 62 LGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSPFL 121
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
Y T+ +L ++ DY+ L +HL Q + ++ I E +L L H
Sbjct: 122 VTLHYAFQTETKLHLILDYINGGELFTHLS-------QRERFTEHEVQIYVGEIVLALEH 174
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK---GTLGYLAPEY 216
II+RDIK N+LLDS+ ++ DFG +K E V+ T R GT+ Y+AP+
Sbjct: 175 LHKLGIIYRDIKLENILLDSNGHVVLTDFGLSK---EFVADETERAYDFCGTIEYMAPDI 231
Query: 217 AMWGKV--SESCDVYSFGILLLEILTGRKPI 245
G ++ D +S G+L+ E+LTG P
Sbjct: 232 VRGGDSGHDKAVDWWSLGVLMYELLTGASPF 262
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 73.2 bits (178), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 48 KLGEGGFGSVYWGR----TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG+G FG V G + + +AVK LK +A +F EV + + H+NL+
Sbjct: 25 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G +++ + P SLL L ++ G L R + + AEG+ YL
Sbjct: 85 RLYGVVLTPPMKMVT-ELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQV--AEGMGYLE-- 138
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAM 218
+ IHRD+ A N+LL + + DFG + +P+ H M K + APE
Sbjct: 139 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 197
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG-VKRTITEWAEPLIVKGKFKELVDPK 276
S + D + FG+ L E+ T G++P L G + I + E L P+
Sbjct: 198 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------PR 246
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDP 319
E+ + NV V C +PE RP + + L P
Sbjct: 247 -----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 284
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/217 (31%), Positives = 99/217 (45%), Gaps = 19/217 (8%)
Query: 37 HTATNGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLG 92
H + F +G+G FG V R ++ + AVK L+ + K E E VL
Sbjct: 34 HAKPSDFHFLKVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLL 93
Query: 93 R-VRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIA-IGS 150
+ V+H L+GL D+ V DY+ L HL + L+ + R A I S
Sbjct: 94 KNVKHPFLVGLHFSFQTADKLYFVLDYINGGELFYHLQRE---RCFLEPRARFYAAEIAS 150
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGT 208
A G YLH + +I++RD+K N+LLDS ++ DFG K E + H T+ GT
Sbjct: 151 ALG--YLH---SLNIVYRDLKPENILLDSQGHIVLTDFGLCK---ENIEHNSTTSTFCGT 202
Query: 209 LGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
YLAPE + D + G +L E+L G P
Sbjct: 203 PEYLAPEVLHKQPYDRTVDWWCLGAVLYEMLYGLPPF 239
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEMEFAVEVEVLGRVRHKNLL 100
+LG+G FG VY G D ++ +AVK + S + +EF E V+ +++
Sbjct: 25 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEVQLDWKRRMKIAIGSAEGI 154
L G + L+V + M + L S+L G + +++A A+G+
Sbjct: 85 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 144
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG--YL 212
YL+ + +HR++ A N ++ DF + DFG + I E + KG L ++
Sbjct: 145 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWM 200
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
APE G + S D++SFG++L EI + +P + L E ++ G + +
Sbjct: 201 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-------NEQVLKFVMDGGYLD 253
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
D N ++ ++ +C Q P RP E+VN L
Sbjct: 254 QPD---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 287
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 125/297 (42%), Gaps = 58/297 (19%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG+G FG V R + D A+KK++ K + EV +L + H+ ++ R Y A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVMLLASLNHQYVV--RYYAA 70
Query: 108 GTDQR---------------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE 152
++R I +Y N +L +H + + + ++ R + + E
Sbjct: 71 WLERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWRLFRQIL---E 127
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE-------------GVS 199
+ Y+H + IIHRD+K N+ +D + DFG AK + G S
Sbjct: 128 ALSYIH---SQGIIHRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 200 HMTTRVKGTLGYLAPEYAM-WGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITE 258
T GT Y+A E G +E D+YS GI+ E+ I G++R
Sbjct: 185 DNLTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEM------IYPFSTGMERV--- 235
Query: 259 WAEPLIVKGKFKEL--VDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
K+L V + DFD+N++K + L + +P KRP + ++N+
Sbjct: 236 --------NILKKLRSVSIEFPPDFDDNKMKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 72/283 (25%), Positives = 125/283 (44%), Gaps = 36/283 (12%)
Query: 48 KLGEGGFGSVYWGRTSDGLQ------IAVKKLKAMNS-KAEMEFAVEVEVLGRVRHKNLL 100
+LG+G FG VY G D ++ +AVK + S + +EF E V+ +++
Sbjct: 24 ELGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVV 83
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHG------QYAGEVQLDWKRRMKIAIGSAEGI 154
L G + L+V + M + L S+L G + +++A A+G+
Sbjct: 84 RLLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGM 143
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG--YL 212
YL+ + +HR++ A N ++ DF + DFG + I E + KG L ++
Sbjct: 144 AYLNAK---KFVHRNLAARNCMVAHDFTVKIGDFGMTRDIYE-TDYYRKGGKGLLPVRWM 199
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
APE G + S D++SFG++L EI + +P + L E ++ G + +
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLS-------NEQVLKFVMDGGYLD 252
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
D N ++ ++ +C Q P RP E+VN L
Sbjct: 253 QPD---------NCPERVTDLMRMCWQFNPNMRPTFLEIVNLL 286
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 73/253 (28%), Positives = 116/253 (45%), Gaps = 28/253 (11%)
Query: 22 TPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-A 75
PN A RI E F L G FG+VY W + ++I A+K+L+ A
Sbjct: 3 APNQALLRILKETE-------FKKIKVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREA 55
Query: 76 MNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYA 133
+ KA E E V+ V + ++ L G C + +LI MP LL ++ H
Sbjct: 56 TSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNI 114
Query: 134 G-EVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK 192
G + L+W + A+G+ YL ++HRD+ A NVL+ + + DFG AK
Sbjct: 115 GSQYLLNW------CVQIAKGMNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAK 165
Query: 193 LI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
L+ E + K + ++A E + + DV+S+G+ + E++T G KP + +P
Sbjct: 166 LLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPA 225
Query: 251 GVKRTITEWAEPL 263
+I E E L
Sbjct: 226 SEISSILEKGERL 238
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 48 KLGEGGFGSVYWGR----TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG+G FG V G + + +AVK LK +A +F EV + + H+NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G +++ + P SLL L ++ G L R + + AEG+ YL
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQV--AEGMGYLE-- 128
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAM 218
+ IHRD+ A N+LL + + DFG + +P+ H M K + APE
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG-VKRTITEWAEPLIVKGKFKELVDPK 276
S + D + FG+ L E+ T G++P L G + I + E L P+
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------PR 236
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDP 319
E+ + NV V C +PE RP + + L P
Sbjct: 237 -----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 72.8 bits (177), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 34/283 (12%)
Query: 48 KLGEGGFGSVYWGR----TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG+G FG V G + + +AVK LK +A +F EV + + H+NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G +++ + P SLL L ++ G L R + + AEG+ YL
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQV--AEGMGYLE-- 128
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAM 218
+ IHRD+ A N+LL + + DFG + +P+ H M K + APE
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESLK 187
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG-VKRTITEWAEPLIVKGKFKELVDPK 276
S + D + FG+ L E+ T G++P L G + I + E L P+
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------PR 236
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDP 319
E+ + NV V C +PE RP + + L P
Sbjct: 237 -----PEDCPQDIYNVMVQCWAHKPEDRPTFVALRDFLLEAQP 274
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 72.4 bits (176), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 43 FSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-AMNSKAEMEFAVEVEVLGRVRH 96
F LG G FG+VY W + ++I A+K+L+ A + KA E E V+ V +
Sbjct: 14 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 73
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAG-EVQLDWKRRMKIAIGSAEG 153
++ L G C + +LI MP LL ++ H G + L+W + AEG
Sbjct: 74 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEG 126
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYL 212
+ YL ++HRD+ A NVL+ + + DFG AKL+ E + K + ++
Sbjct: 127 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 183
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
A E + + DV+S+G+ + E++T G KP + +P +I E E L
Sbjct: 184 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 235
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 72.4 bits (176), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 80/305 (26%), Positives = 130/305 (42%), Gaps = 63/305 (20%)
Query: 37 HTATNGFSDDNK----LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAVEVEVL 91
HT F D K +G GGFG V+ + DG +K++K N KAE E V+ L
Sbjct: 3 HTVDKRFGMDFKEIELIGSGGFGQVFKAKHRIDGKTYVIKRVKYNNEKAERE----VKAL 58
Query: 92 GRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH---------LHGQYAGEVQLD-W- 140
++ H N++ G G +DY P S + + ++ + L+ W
Sbjct: 59 AKLDHVNIVHYNGCWDG-------FDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWI 111
Query: 141 -KRR---------MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGF 190
KRR +++ +G+ Y+H + +I+RD+K SN+ L + + DFG
Sbjct: 112 EKRRGEKLDKVLALELFEQITKGVDYIH---SKKLINRDLKPSNIFLVDTKQVKIGDFGL 168
Query: 191 AKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPG 250
+ R KGTL Y++PE + D+Y+ G++L E+L
Sbjct: 169 VTSLKNDGKRX--RSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL----------- 215
Query: 251 GVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEV 310
V T E ++ F +L D + FD K+ + + +PE RPN E+
Sbjct: 216 HVCDTAFETSKF------FTDLRDGIISDIFD----KKEKTLLQKLLSKKPEDRPNTSEI 265
Query: 311 VNTLT 315
+ TLT
Sbjct: 266 LRTLT 270
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 75/289 (25%), Positives = 125/289 (43%), Gaps = 44/289 (15%)
Query: 49 LGEGGFGSVY------WGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V G+ L++AVK LK+ E E E++++ + +H+N++
Sbjct: 54 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 113
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQY----------AGEVQLDWKRRMKIAIGS 150
L G C L++ +Y LL+ L + L + + +
Sbjct: 114 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSSQV 173
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT-- 208
A+G+ +L + + IHRD+ A NVLL + + DFG A+ I +++ VKG
Sbjct: 174 AQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI---VKGNAR 227
Query: 209 --LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIV 265
+ ++APE + DV+S+GILL EI + G P PG ++V
Sbjct: 228 LPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPG------------ILV 272
Query: 266 KGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
KF +LV + K ++ C EP RP +++ + L
Sbjct: 273 NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 321
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 48 KLGEGGFGSVYWGR----TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG+G FG V G + + +AVK LK +A +F EV + + H+NL+
Sbjct: 19 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 78
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G +++ + P SLL L ++ G L R + + AEG+ YL
Sbjct: 79 RLYGVVLTPPMKMVT-ELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQV--AEGMGYLE-- 132
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAM 218
+ IHRD+ A N+LL + + DFG + +P+ H M K + APE
Sbjct: 133 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 191
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG-VKRTITEWAEPLIVKGKFKELVDPK 276
S + D + FG+ L E+ T G++P L G + I + E L P+
Sbjct: 192 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------PR 240
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNM 307
E+ + NV V C +PE RP
Sbjct: 241 -----PEDCPQDIYNVMVQCWAHKPEDRPTF 266
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 77/271 (28%), Positives = 117/271 (43%), Gaps = 34/271 (12%)
Query: 48 KLGEGGFGSVYWGR----TSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG+G FG V G + + +AVK LK +A +F EV + + H+NL+
Sbjct: 15 KLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNLI 74
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L G +++ + P SLL L ++ G L R + + AEG+ YL
Sbjct: 75 RLYGVVLTPPMKMVT-ELAPLGSLLDRLR-KHQGHFLLGTLSRYAVQV--AEGMGYLE-- 128
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAM 218
+ IHRD+ A N+LL + + DFG + +P+ H M K + APE
Sbjct: 129 -SKRFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESLK 187
Query: 219 WGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG-VKRTITEWAEPLIVKGKFKELVDPK 276
S + D + FG+ L E+ T G++P L G + I + E L P+
Sbjct: 188 TRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERL-----------PR 236
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNM 307
E+ + NV V C +PE RP
Sbjct: 237 -----PEDCPQDIYNVMVQCWAHKPEDRPTF 262
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF + +D ++ V K + + ++E+ + + H++++G G
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + ++ + G YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL---GCQYLHRN---R 141
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D E + DFG A + E + GT Y+APE S
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 200
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+S G ++ +L G+ P E T + ++ K E PK +
Sbjct: 201 EVDVWSIGCIMYTLLVGKPPFE----------TSCLKETYLRIKKNEYSIPKHINPVAAS 250
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNT---LTGYDP 319
+++ + Q++P RP + E++N +GY P
Sbjct: 251 LIQKML-------QTDPTARPTINELLNDEFFTSGYIP 281
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 72.0 bits (175), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 38 TATNGFSDDNKLGE----GGFGSVYWGRTSD-GLQIAVKKLKA---MNSKAEMEFAVEVE 89
T + SD +LGE GG V+ R +AVK L+A + + F E +
Sbjct: 5 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 64
Query: 90 VLGRVRHKNLLGLRGYCAGTDQR------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
+ H ++ + Y G + IV +Y+ ++L +H E + KR
Sbjct: 65 NAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRA 118
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMT- 202
+++ + + + + H IIHRD+K +N+++ + V DFG A+ I + + +T
Sbjct: 119 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 175
Query: 203 -TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
V GT YL+PE A V DVYS G +L E+LTG P
Sbjct: 176 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF + +D ++ V K + + ++E+ + + H++++G G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + ++ + G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL---GCQYLHRN---R 137
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D E + DFG A + E + GT Y+APE S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+S G ++ +L G+ P E T + ++ K E PK +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFE----------TSCLKETYLRIKKNEYSIPKHINPVAAS 246
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNT---LTGYDP 319
+++ + Q++P RP + E++N +GY P
Sbjct: 247 LIQKML-------QTDPTARPTINELLNDEFFTSGYIP 277
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 71.6 bits (174), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF + +D ++ V K + + ++E+ + + H++++G G
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + ++ + G YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL---GCQYLHRN---R 137
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D E + DFG A + E + GT Y+APE S
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKTLCGTPNYIAPEVLSKKGHSF 196
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+S G ++ +L G+ P E T + ++ K E PK +
Sbjct: 197 EVDVWSIGCIMYTLLVGKPPFE----------TSCLKETYLRIKKNEYSIPKHINPVAAS 246
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNT---LTGYDP 319
+++ + Q++P RP + E++N +GY P
Sbjct: 247 LIQKML-------QTDPTARPTINELLNDEFFTSGYIP 277
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 102/223 (45%), Gaps = 25/223 (11%)
Query: 38 TATNGFSDDNKLGE----GGFGSVYWGRTSD-GLQIAVKKLKA---MNSKAEMEFAVEVE 89
T + SD +LGE GG V+ R +AVK L+A + + F E +
Sbjct: 22 TTPSHLSDRYELGEILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQ 81
Query: 90 VLGRVRHKNLLGLRGYCAGTDQR------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
+ H ++ + Y G + IV +Y+ ++L +H E + KR
Sbjct: 82 NAAALNHPAIVAV--YDTGEAETPAGPLPYIVMEYVDGVTLRDIVHT----EGPMTPKRA 135
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMT- 202
+++ + + + + H IIHRD+K +N+++ + V DFG A+ I + + +T
Sbjct: 136 IEVIADACQALNFSHQN---GIIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQ 192
Query: 203 -TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
V GT YL+PE A V DVYS G +L E+LTG P
Sbjct: 193 TAAVIGTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 71.6 bits (174), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 117/220 (53%), Gaps = 17/220 (7%)
Query: 38 TATNGFSDDNKLGEGGFGSVYWG-RTSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVR 95
++++ F KLG G + +VY G + G+ +A+K++K + + A+ E+ ++ ++
Sbjct: 2 SSSSQFKQLEKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIREISLMKELK 61
Query: 96 HKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGE----VQLDWKRRMKIAIGSA 151
H+N++ L ++ +V+++M N L ++ + G ++L+ + + +
Sbjct: 62 HENIVRLYDVIHTENKLTLVFEFMDN-DLKKYMDSRTVGNTPRGLELNLVKYFQWQL--L 118
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGY 211
+G+ + H I+HRD+K N+L++ + + DFG A+ V+ ++ V TL Y
Sbjct: 119 QGLAFCHEN---KILHRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVV-TLWY 174
Query: 212 LAPEYAMWGKV-SESCDVYSFGILLLEILTGRKPIEKLPG 250
AP+ M + S S D++S G +L E++TG KP+ PG
Sbjct: 175 RAPDVLMGSRTYSTSIDIWSCGCILAEMITG-KPL--FPG 211
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF Y D ++ V K + + + + E+ + + + +++G G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + M+ I +G+ YLH+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---R 162
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D + + DFG A I E + GT Y+APE S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKXLCGTPNYIAPEVLCKKGHSF 221
Query: 225 SCDVYSFGILLLEILTGRKPIE 246
D++S G +L +L G+ P E
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFE 243
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 111/232 (47%), Gaps = 21/232 (9%)
Query: 43 FSDDNKLGEGGFGSVY---WGRTSDGLQI--AVKKLK-AMNSKAEMEFAVEVEVLGRVRH 96
F LG G FG+VY W + ++I A+K+L+ A + KA E E V+ V +
Sbjct: 11 FKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDN 70
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAG-EVQLDWKRRMKIAIGSAEG 153
++ L G C + +LI MP LL ++ H G + L+W + A+G
Sbjct: 71 PHVCRLLGICLTSTVQLIT-QLMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKG 123
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYL 212
+ YL ++HRD+ A NVL+ + + DFG AKL+ E + K + ++
Sbjct: 124 MNYLEDR---RLVHRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWM 180
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
A E + + DV+S+G+ + E++T G KP + +P +I E E L
Sbjct: 181 ALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERL 232
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF Y D ++ V K + + + + E+ + + + +++G G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + M+ I +G+ YLH+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---R 162
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D + + DFG A I E + GT Y+APE S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKTLCGTPNYIAPEVLCKKGHSF 221
Query: 225 SCDVYSFGILLLEILTGRKPIE 246
D++S G +L +L G+ P E
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFE 243
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF + +D ++ V K + + ++E+ + + H++++G G
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + ++ + G YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIV---LGCQYLHRN---R 161
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D E + DFG A + E + GT Y+APE S
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 220
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+S G ++ +L G+ P E T + ++ K E PK +
Sbjct: 221 EVDVWSIGCIMYTLLVGKPPFE----------TSCLKETYLRIKKNEYSIPKHINPVAAS 270
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNT---LTGYDP 319
+++ + Q++P RP + E++N +GY P
Sbjct: 271 LIQKML-------QTDPTARPTINELLNDEFFTSGYIP 301
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 71.2 bits (173), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 66/278 (23%), Positives = 119/278 (42%), Gaps = 32/278 (11%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF + +D ++ V K + + ++E+ + + H++++G G
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + ++ + G YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVL---GCQYLHRN---R 159
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D E + DFG A + E + GT Y+APE S
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHSF 218
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
DV+S G ++ +L G+ P E T + ++ K E PK +
Sbjct: 219 EVDVWSIGCIMYTLLVGKPPFE----------TSCLKETYLRIKKNEYSIPKHINPVAAS 268
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVNT---LTGYDP 319
+++ + Q++P RP + E++N +GY P
Sbjct: 269 LIQKML-------QTDPTARPTINELLNDEFFTSGYIP 299
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF Y D ++ V K + + + + E+ + + + +++G G
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + M+ I +G+ YLH+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---R 146
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D + + DFG A I E + GT Y+APE S
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSF 205
Query: 225 SCDVYSFGILLLEILTGRKPIE 246
D++S G +L +L G+ P E
Sbjct: 206 EVDIWSLGCILYTLLVGKPPFE 227
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 120/279 (43%), Gaps = 34/279 (12%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF + +D ++ V K + + ++E+ + + H++++G G
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMK-IAIGSAEGILYLHHEVTP 163
+ D +V + SLL LH + + + + ++ I +G YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLE-LHKRRKALTEPEARYYLRQIVLGCQ----YLHRN--- 134
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+IHRD+K N+ L+ D E + DFG A + E + GT Y+APE S
Sbjct: 135 RVIHRDLKLGNLFLNEDLEVKIGDFGLATKV-EYDGERKKVLCGTPNYIAPEVLSKKGHS 193
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDE 283
DV+S G ++ +L G+ P E T + ++ K E PK
Sbjct: 194 FEVDVWSIGCIMYTLLVGKPPFE----------TSCLKETYLRIKKNEYSIPKHINPVAA 243
Query: 284 NQLKQAINVAVLCVQSEPEKRPNMKEVVNT---LTGYDP 319
+ +++ + Q++P RP + E++N +GY P
Sbjct: 244 SLIQKML-------QTDPTARPTINELLNDEFFTSGYIP 275
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGRTSDGLQI----AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG+GGF Y D ++ V K + + + + E+ + + + +++G G
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ D +V + SLL LH + + + + M+ I +G+ YLH+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLE-LHKRRKAVTEPEARYFMRQTI---QGVQYLHNN---R 162
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
+IHRD+K N+ L+ D + + DFG A I E + GT Y+APE S
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKI-EFDGERKKDLCGTPNYIAPEVLCKKGHSF 221
Query: 225 SCDVYSFGILLLEILTGRKPIE 246
D++S G +L +L G+ P E
Sbjct: 222 EVDIWSLGCILYTLLVGKPPFE 243
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 49 LGEGGFGSVYWGRT---SDGLQI-AVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LG+G FG V+ + SD Q+ A+K LK + + + +E ++L V H ++ L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 103 RGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
Y T+ +L ++ D++ L + L + EV + + AE L L H
Sbjct: 92 H-YAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEE---DVKFYLAELALALDHLH 143
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK--GTLGYLAPEYAMW 219
+ II+RD+K N+LLD + + DFG +K E + H GT+ Y+APE
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIE 246
++S D +SFG+L+ E+LTG P +
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 71.2 bits (173), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 53/199 (26%), Positives = 93/199 (46%), Gaps = 12/199 (6%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG-LRGY 105
K+G+G G+VY + G ++A++++ + E+ V+ ++ N++ L Y
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
G D+ +V +Y+ SL E +D + + + + +LH +
Sbjct: 87 LVG-DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECLQALEFLHSN---QV 137
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRDIK+ N+LL D + DFGF I S +T V GT ++APE
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPK 196
Query: 226 CDVYSFGILLLEILTGRKP 244
D++S GI+ +E++ G P
Sbjct: 197 VDIWSLGIMAIEMIEGEPP 215
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 70.9 bits (172), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/218 (30%), Positives = 104/218 (47%), Gaps = 43/218 (19%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLG---- 101
++G+G +G V+ G+ G ++AVK + E + E E+ V RH+N+LG
Sbjct: 44 QIGKGRYGEVWMGKWR-GEKVAVK---VFFTTEEASWFRETEIYQTVLMRHENILGFIAA 99
Query: 102 -LRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
++G + T Q ++ DY N SL +L LD K +K+A S G+ +LH E
Sbjct: 100 DIKGTGSWT-QLYLITDYHENGSLYDYLKS-----TTLDAKSMLKLAYSSVSGLCHLHTE 153
Query: 161 V-----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHM----TTRVKGTLGY 211
+ P I HRD+K+ N+L+ + +AD G A + + TRV GT Y
Sbjct: 154 IFSTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRV-GTKRY 212
Query: 212 LAPEYAMWGKVSES-----------CDVYSFGILLLEI 238
+ PE + ES D+YSFG++L E+
Sbjct: 213 MPPEV-----LDESLNRNHFQSYIMADMYSFGLILWEV 245
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 49 LGEGGFGSVYWGRT---SDGLQI-AVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LG+G FG V+ + SD Q+ A+K LK + + + +E ++L V H ++ L
Sbjct: 32 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 91
Query: 103 RGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
Y T+ +L ++ D++ L + L + EV + + AE L L H
Sbjct: 92 H-YAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEE---DVKFYLAELALALDHLH 143
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK--GTLGYLAPEYAMW 219
+ II+RD+K N+LLD + + DFG +K E + H GT+ Y+APE
Sbjct: 144 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNR 200
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIE 246
++S D +SFG+L+ E+LTG P +
Sbjct: 201 RGHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 70.5 bits (171), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 103/207 (49%), Gaps = 20/207 (9%)
Query: 49 LGEGGFGSVYWGRT---SDGLQI-AVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LG+G FG V+ + SD Q+ A+K LK + + + +E ++L V H ++ L
Sbjct: 33 LGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIVKL 92
Query: 103 RGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
Y T+ +L ++ D++ L + L + EV + + AE L L H
Sbjct: 93 H-YAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEE---DVKFYLAELALALDHLH 144
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK--GTLGYLAPEYAMW 219
+ II+RD+K N+LLD + + DFG +K E + H GT+ Y+APE
Sbjct: 145 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---ESIDHEKKAYSFCGTVEYMAPEVVNR 201
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIE 246
++S D +SFG+L+ E+LTG P +
Sbjct: 202 RGHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 62/206 (30%), Positives = 97/206 (47%), Gaps = 17/206 (8%)
Query: 49 LGEGGFGSVYWG--RTSDG--LQIAVKKLKAMNSKAEM--EFAVEVEVLGRVRHKNLLGL 102
LGEG FGSV G + DG L++AVK +K NS EF E + H N++ L
Sbjct: 42 LGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNVIRL 101
Query: 103 RGYC-----AGTDQRLIVYDYMPNLSLLSHLHGQY--AGEVQLDWKRRMKIAIGSAEGIL 155
G C G + +++ +M L ++L G + + +K + A G+
Sbjct: 102 LGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIALGME 161
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV-KGTLGYLAP 214
YL + + +HRD+ A N +L D VADFG +K I G + R+ K + ++A
Sbjct: 162 YLSNR---NFLHRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWIAI 218
Query: 215 EYAMWGKVSESCDVYSFGILLLEILT 240
E + DV++FG+ + EI T
Sbjct: 219 ESLADRVYTSKSDVWAFGVTMWEIAT 244
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 16/245 (6%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRH 96
N F LG+GGFG V + + G A KKL+ K A+ E ++L +V
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
+ ++ L D +V M L H++ + G+ R + A G+
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY--HMGQAGFPEARAVFYAAEICCGLED 301
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
LH E I++RD+K N+LLD ++D G A +PEG + + RV GT+GY+APE
Sbjct: 302 LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEV 356
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLI--VKGKFKELVD 274
+ + S D ++ G LL E++ G+ P ++ +KR E E L+ V ++ E
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR---EEVERLVKEVPEEYSERFS 413
Query: 275 PKLRG 279
P+ R
Sbjct: 414 PQARS 418
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 115/245 (46%), Gaps = 16/245 (6%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRH 96
N F LG+GGFG V + + G A KKL+ K A+ E ++L +V
Sbjct: 184 NTFRQYRVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKVNS 243
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
+ ++ L D +V M L H++ + G+ R + A G+
Sbjct: 244 RFVVSLAYAYETKDALCLVLTLMNGGDLKFHIY--HMGQAGFPEARAVFYAAEICCGLED 301
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
LH E I++RD+K N+LLD ++D G A +PEG + + RV GT+GY+APE
Sbjct: 302 LHRE---RIVYRDLKPENILLDDHGHIRISDLGLAVHVPEGQT-IKGRV-GTVGYMAPEV 356
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLI--VKGKFKELVD 274
+ + S D ++ G LL E++ G+ P ++ +KR E E L+ V ++ E
Sbjct: 357 VKNERYTFSPDWWALGCLLYEMIAGQSPFQQRKKKIKR---EEVERLVKEVPEEYSERFS 413
Query: 275 PKLRG 279
P+ R
Sbjct: 414 PQARS 418
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 70.1 bits (170), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 73/295 (24%), Positives = 122/295 (41%), Gaps = 54/295 (18%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG+G FG V R + D A+KK++ K + EV +L + H+ ++ R Y A
Sbjct: 14 LGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILS-EVXLLASLNHQYVV--RYYAA 70
Query: 108 GTDQR---------------LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE 152
++R I +Y N +L +H + + + ++ R + + E
Sbjct: 71 WLERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWRLFRQIL---E 127
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE-------------GVS 199
+ Y+H + IIHR++K N+ +D + DFG AK + G S
Sbjct: 128 ALSYIH---SQGIIHRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSS 184
Query: 200 HMTTRVKGTLGYLAPEYAM-WGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITE 258
T GT Y+A E G +E D YS GI+ E I G +R
Sbjct: 185 DNLTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFE------XIYPFSTGXER---- 234
Query: 259 WAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
+ + K + V + DFD+N+ K + L + +P KRP + ++N+
Sbjct: 235 ----VNILKKLRS-VSIEFPPDFDDNKXKVEKKIIRLLIDHDPNKRPGARTLLNS 284
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 93/213 (43%), Gaps = 11/213 (5%)
Query: 38 TATNGFSDDNKLGEGGFGSVYW-GRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVR 95
T + F KLG G FG V+ S GL+ +K + S+ ME E+EVL +
Sbjct: 19 TIDDLFIFKRKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPMEQIEAEIEVLKSLD 78
Query: 96 HKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGIL 155
H N++ + IV + LL + A L ++ +
Sbjct: 79 HPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKALSEGYVAELMKQMMNALA 138
Query: 156 YLHHEVTPHIIHRDIKASNVLLD--SDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYL 212
Y H + H++H+D+K N+L S P+ + DFG A+L +T GT Y+
Sbjct: 139 YFHSQ---HVVHKDLKPENILFQDTSPHSPIKIIDFGLAELFKS--DEHSTNAAGTALYM 193
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
APE V+ CD++S G+++ +LTG P
Sbjct: 194 APE-VFKRDVTFKCDIWSAGVVMYFLLTGCLPF 225
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 69.7 bits (169), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG-LRGY 105
K+G+G G+VY + G ++A++++ + E+ V+ ++ N++ L Y
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
G D+ +V +Y+ SL E +D + + + + +LH + +
Sbjct: 87 LVG-DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECLQALEFLH---SNQV 137
Query: 166 IHRDIKASNVLLDSDFEPLVADFGF-AKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
IHRDIK+ N+LL D + DFGF A++ PE + + GT ++APE
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SEMVGTPYWMAPEVVTRKAYGP 195
Query: 225 SCDVYSFGILLLEILTGRKP 244
D++S GI+ +E++ G P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/271 (25%), Positives = 115/271 (42%), Gaps = 27/271 (9%)
Query: 43 FSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLL 100
F+ ++G+G FG V+ G + Q+ K+ + + + E+ VL + +
Sbjct: 25 FTKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSSYVT 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G + I+ +Y+ S L L E Q+ + + +G+ YLH E
Sbjct: 85 KYYGSYLKGSKLWIIMEYLGGGSALDLLRAGPFDEFQIATMLKEIL-----KGLDYLHSE 139
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
IHRDIKA+NVLL + +ADFG A + + T V GT ++APE
Sbjct: 140 KK---IHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIQQS 195
Query: 221 KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGD 280
D++S GI +E+ G P + P+ V + P L GD
Sbjct: 196 AYDSKADIWSLGITAIELAKGEPPNSDM------------HPMRVLFLIPKNNPPTLVGD 243
Query: 281 FDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
F ++ K+ I+ C+ +P RP KE++
Sbjct: 244 FTKS-FKEFIDA---CLNKDPSFRPTAKELL 270
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 43 FSDDNKLGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
F+ K+G+G FG V+ G RT + I + L+ + E E+ VL + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYV 67
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
G + I+ +Y+ S L L E Q+ R + +G+ YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL-----KGLDYLHS 122
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
E IHRDIKA+NVLL E +ADFG A + + T V GT ++APE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 178
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
D++S GI +E+ G P +L P+ V + P L G
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSEL------------HPMKVLFLIPKNNPPTLEG 226
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++ + LK+ + C+ EP RP KE++
Sbjct: 227 NYSK-PLKEFVEA---CLNKEPSFRPTAKELL 254
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG-LRGY 105
K+G+G G+VY + G ++A++++ + E+ V+ ++ N++ L Y
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
G D+ +V +Y+ SL E +D + + + + +LH + +
Sbjct: 88 LVG-DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECLQALEFLH---SNQV 138
Query: 166 IHRDIKASNVLLDSDFEPLVADFGF-AKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
IHRDIK+ N+LL D + DFGF A++ PE + + GT ++APE
Sbjct: 139 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGP 196
Query: 225 SCDVYSFGILLLEILTGRKP 244
D++S GI+ +E++ G P
Sbjct: 197 KVDIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/200 (26%), Positives = 96/200 (48%), Gaps = 14/200 (7%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG-LRGY 105
K+G+G G+VY + G ++A++++ + E+ V+ ++ N++ L Y
Sbjct: 27 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 86
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
G D+ +V +Y+ SL E +D + + + + +LH + +
Sbjct: 87 LVG-DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECLQALEFLH---SNQV 137
Query: 166 IHRDIKASNVLLDSDFEPLVADFGF-AKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSE 224
IHRDIK+ N+LL D + DFGF A++ PE + + GT ++APE
Sbjct: 138 IHRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKR--SXMVGTPYWMAPEVVTRKAYGP 195
Query: 225 SCDVYSFGILLLEILTGRKP 244
D++S GI+ +E++ G P
Sbjct: 196 KVDIWSLGIMAIEMIEGEPP 215
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 76/272 (27%), Positives = 116/272 (42%), Gaps = 29/272 (10%)
Query: 43 FSDDNKLGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
F+ K+G+G FG V+ G RT + I + L+ + E E+ VL + +
Sbjct: 29 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYV 87
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
G + I+ +Y+ S L L E Q+ R + +G+ YLH
Sbjct: 88 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL-----KGLDYLHS 142
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
E IHRDIKA+NVLL E +ADFG A + + T V GT ++APE
Sbjct: 143 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFV-GTPFWMAPEVIKQ 198
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
D++S GI +E+ G P +L P+ V + P L G
Sbjct: 199 SAYDSKADIWSLGITAIELARGEPPHSEL------------HPMKVLFLIPKNNPPTLEG 246
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++ + LK+ + C+ EP RP KE++
Sbjct: 247 NYSK-PLKEFVEA---CLNKEPSFRPTAKELL 274
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 69.7 bits (169), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/213 (28%), Positives = 103/213 (48%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G +G V W G +AVK +S+ E + E E+ V RH N+LG
Sbjct: 16 VGKGRYGEV-WRGLWHGESVAVK---IFSSRDEQSWFRETEIYNTVLLRHDNILGF---- 67
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQ-----YAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
+D + + L L++H H + L+ +++A+ +A G+ +LH E+
Sbjct: 68 IASD--MTSRNSSTQLWLITHYHEHGSLYDFLQRQTLEPHLALRLAVSAACGLAHLHVEI 125
Query: 162 -----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHM----TTRVKGTLGYL 212
P I HRD K+ NVL+ S+ + +AD G A + +G ++ RV GT Y+
Sbjct: 126 FGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRV-GTKRYM 184
Query: 213 APEYAMWGKVSESC-------DVYSFGILLLEI 238
APE + ++ C D+++FG++L EI
Sbjct: 185 APE-VLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 99/207 (47%), Gaps = 20/207 (9%)
Query: 49 LGEGGFGSVYW----GRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
LG+G FG V+ R G A+K LK + + + +E ++L V H ++ L
Sbjct: 36 LGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVVKL 95
Query: 103 RGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
Y T+ +L ++ D++ L + L + EV + + AE L L H
Sbjct: 96 H-YAFQTEGKLYLILDFLRGGDLFTRL----SKEVMFTEE---DVKFYLAELALGLDHLH 147
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK--GTLGYLAPEYAMW 219
+ II+RD+K N+LLD + + DFG +K E + H GT+ Y+APE
Sbjct: 148 SLGIIYRDLKPENILLDEEGHIKLTDFGLSK---EAIDHEKKAYSFCGTVEYMAPEVVNR 204
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIE 246
S S D +S+G+L+ E+LTG P +
Sbjct: 205 QGHSHSADWWSYGVLMFEMLTGSLPFQ 231
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 69.3 bits (168), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/199 (26%), Positives = 94/199 (47%), Gaps = 12/199 (6%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG-LRGY 105
K+G+G G+VY + G ++A++++ + E+ V+ ++ N++ L Y
Sbjct: 28 KIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDSY 87
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
G D+ +V +Y+ SL E +D + + + + +LH + +
Sbjct: 88 LVG-DELWVVMEYLAGGSLTD-----VVTETCMDEGQIAAVCRECLQALEFLH---SNQV 138
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHR+IK+ N+LL D + DFGF I S +T V GT ++APE
Sbjct: 139 IHRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMV-GTPYWMAPEVVTRKAYGPK 197
Query: 226 CDVYSFGILLLEILTGRKP 244
D++S GI+ +E++ G P
Sbjct: 198 VDIWSLGIMAIEMIEGEPP 216
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAVEVEV--LGRVRHKNLLGLRG 104
LGEG FG V T+ G ++A+K + K + +K++M+ +E E+ L +RH +++ L
Sbjct: 21 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 80
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
D+ ++V +Y N L ++ Q + + +R + I + E Y H
Sbjct: 81 VIKSKDEIIMVIEYAGN-ELFDYI-VQRDKMSEQEARRFFQQIISAVE---YCHRH---K 132
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV-- 222
I+HRD+K N+LLD +ADFG + ++ +G T+ G+ Y APE + GK+
Sbjct: 133 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 189
Query: 223 SESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +L R P +
Sbjct: 190 GPEVDVWSCGVILYVMLCRRLPFD 213
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/298 (25%), Positives = 127/298 (42%), Gaps = 53/298 (17%)
Query: 49 LGEGGFGSVY------WGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V G+ L++AVK LK+ E E E++++ + +H+N++
Sbjct: 39 LGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHENIV 98
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV-------------------QLDWK 141
L G C L++ +Y LL+ L + + L+ +
Sbjct: 99 NLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLELR 158
Query: 142 RRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHM 201
+ + A+G+ +L + + IHRD+ A NVLL + + DFG A+ I +++
Sbjct: 159 DLLHFSSQVAQGMAFL---ASKNCIHRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYI 215
Query: 202 TTRVKGT----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTI 256
VKG + ++APE + DV+S+GILL EI + G P PG
Sbjct: 216 ---VKGNARLPVKWMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNP---YPG------ 263
Query: 257 TEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
++V KF +LV + K ++ C EP RP +++ + L
Sbjct: 264 ------ILVNSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFL 315
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAVEVEV--LGRVRHKNLLGLRG 104
LGEG FG V T+ G ++A+K + K + +K++M+ +E E+ L +RH +++ L
Sbjct: 16 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 75
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
D+ ++V +Y N L ++ Q + + +R + I + E Y H
Sbjct: 76 VIKSKDEIIMVIEYAGN-ELFDYI-VQRDKMSEQEARRFFQQIISAVE---YCHRH---K 127
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV-- 222
I+HRD+K N+LLD +ADFG + ++ +G T+ G+ Y APE + GK+
Sbjct: 128 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 184
Query: 223 SESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +L R P +
Sbjct: 185 GPEVDVWSCGVILYVMLCRRLPFD 208
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAVEVEV--LGRVRHKNLLGLRG 104
LGEG FG V T+ G ++A+K + K + +K++M+ +E E+ L +RH +++ L
Sbjct: 12 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 71
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
D+ ++V +Y N L ++ Q + + +R + I + E Y H
Sbjct: 72 VIKSKDEIIMVIEYAGN-ELFDYI-VQRDKMSEQEARRFFQQIISAVE---YCHRH---K 123
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV-- 222
I+HRD+K N+LLD +ADFG + ++ +G T+ G+ Y APE + GK+
Sbjct: 124 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 180
Query: 223 SESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +L R P +
Sbjct: 181 GPEVDVWSCGVILYVMLCRRLPFD 204
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 105/204 (51%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAVEVEV--LGRVRHKNLLGLRG 104
LGEG FG V T+ G ++A+K + K + +K++M+ +E E+ L +RH +++ L
Sbjct: 22 LGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIKLYD 81
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
D+ ++V +Y N L ++ Q + + +R + I + E Y H
Sbjct: 82 VIKSKDEIIMVIEYAGN-ELFDYI-VQRDKMSEQEARRFFQQIISAVE---YCHRH---K 133
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV-- 222
I+HRD+K N+LLD +ADFG + ++ +G T+ G+ Y APE + GK+
Sbjct: 134 IVHRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAPE-VISGKLYA 190
Query: 223 SESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +L R P +
Sbjct: 191 GPEVDVWSCGVILYVMLCRRLPFD 214
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 68.9 bits (167), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 25/272 (9%)
Query: 36 LHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL--KAMNSKAEMEFAVEVEVLG 92
+H N FS +G GGFG VY R +D G A+K L K + K A+ ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 93 RVRHKN---LLGLRGYCAGTDQRL-IVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKI 146
+ + Y T +L + D M L HL HG ++ +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS---------EADM 294
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
+AE IL L H +++RD+K +N+LLD ++D G A + H +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIV 265
GT GY+APE G S D +S G +L ++L G P + K I L +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTM 409
Query: 266 KGKFKELVDPKLRGDFDENQLKQAINVAVLCV 297
+ + P+LR E L++ +N + C+
Sbjct: 410 AVELPDSFSPELRS-LLEGLLQRDVNRRLGCL 440
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 68.9 bits (167), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 25/272 (9%)
Query: 36 LHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL--KAMNSKAEMEFAVEVEVLG 92
+H N FS +G GGFG VY R +D G A+K L K + K A+ ++
Sbjct: 183 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 242
Query: 93 RVRHKN---LLGLRGYCAGTDQRL-IVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKI 146
+ + Y T +L + D M L HL HG ++ +
Sbjct: 243 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS---------EADM 293
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
+AE IL L H +++RD+K +N+LLD ++D G A + H +
Sbjct: 294 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 350
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIV 265
GT GY+APE G S D +S G +L ++L G P + K I L +
Sbjct: 351 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTM 408
Query: 266 KGKFKELVDPKLRGDFDENQLKQAINVAVLCV 297
+ + P+LR E L++ +N + C+
Sbjct: 409 AVELPDSFSPELRS-LLEGLLQRDVNRRLGCL 439
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 25/272 (9%)
Query: 36 LHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL--KAMNSKAEMEFAVEVEVLG 92
+H N FS +G GGFG VY R +D G A+K L K + K A+ ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 93 RVRHKN---LLGLRGYCAGTDQRL-IVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKI 146
+ + Y T +L + D M L HL HG ++ +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS---------EADM 294
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
+AE IL L H +++RD+K +N+LLD ++D G A + H +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIV 265
GT GY+APE G S D +S G +L ++L G P + K I L +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTM 409
Query: 266 KGKFKELVDPKLRGDFDENQLKQAINVAVLCV 297
+ + P+LR E L++ +N + C+
Sbjct: 410 AVELPDSFSPELRS-LLEGLLQRDVNRRLGCL 440
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 68.6 bits (166), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 73/272 (26%), Positives = 114/272 (41%), Gaps = 25/272 (9%)
Query: 36 LHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL--KAMNSKAEMEFAVEVEVLG 92
+H N FS +G GGFG VY R +D G A+K L K + K A+ ++
Sbjct: 184 IHLTMNDFSVHRIIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIML 243
Query: 93 RVRHKN---LLGLRGYCAGTDQRL-IVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKI 146
+ + Y T +L + D M L HL HG ++ +
Sbjct: 244 SLVSTGDCPFIVCMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFS---------EADM 294
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
+AE IL L H +++RD+K +N+LLD ++D G A + H +
Sbjct: 295 RFYAAEIILGLEHMHNRFVVYRDLKPANILLDEHGHVRISDLGLACDFSKKKPHASV--- 351
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIV 265
GT GY+APE G S D +S G +L ++L G P + K I L +
Sbjct: 352 GTHGYMAPEVLQKGVAYDSSADWFSLGCMLFKLLRGHSPFRQHKTKDKHEIDRMT--LTM 409
Query: 266 KGKFKELVDPKLRGDFDENQLKQAINVAVLCV 297
+ + P+LR E L++ +N + C+
Sbjct: 410 AVELPDSFSPELRS-LLEGLLQRDVNRRLGCL 440
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/220 (28%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 46 DNKLGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLG 101
D +LG G FGSV G + +A+K LK KA+ E E +++ ++ + ++
Sbjct: 15 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 74
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
L G C L++ ++ LH G +R +I + + +L H+V
Sbjct: 75 LIGVCQAEALMLVM-----EMAGGGPLHKFLVG-------KREEIPVSNVAELL---HQV 119
Query: 162 T--------PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGT--LGY 211
+ + +HRD+ A NVLL + ++DFG +K + S+ T R G L +
Sbjct: 120 SMGMKYLEEKNFVHRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 179
Query: 212 LAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
APE + K S DV+S+G+ + E L+ G+KP +K+ G
Sbjct: 180 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 219
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 33/254 (12%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLRGYC 106
+LG+G FG VY + + +A K+ S+ E+E + VE+++L H N++ L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL---- 99
Query: 107 AGTDQRLIVYDYMPNL-SLLSHLHGQYAGEVQLDWKRRMK------IAIGSAEGILYLHH 159
L + Y NL L+ G V L+ +R + + + + + YLH
Sbjct: 100 ------LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
IIHRD+KA N+L D + +ADFG + + + + GT ++APE M
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDSFI-GTPYWMAPEVVMC 209
Query: 220 GKVSE-----SCDVYSFGILLLEILTGRKPIEKL-PGGVKRTITEWAEPLIVK-----GK 268
+ DV+S GI L+E+ P +L P V I + P + +
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
Query: 269 FKELVDPKLRGDFD 282
FK+ + L + D
Sbjct: 270 FKDFLKKCLEKNVD 283
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 68.6 bits (166), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 111/254 (43%), Gaps = 33/254 (12%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLRGYC 106
+LG+G FG VY + + +A K+ S+ E+E + VE+++L H N++ L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL---- 99
Query: 107 AGTDQRLIVYDYMPNL-SLLSHLHGQYAGEVQLDWKRRMK------IAIGSAEGILYLHH 159
L + Y NL L+ G V L+ +R + + + + + YLH
Sbjct: 100 ------LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
IIHRD+KA N+L D + +ADFG + + + + GT ++APE M
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTIQRRDSFI-GTPYWMAPEVVMC 209
Query: 220 GKVSE-----SCDVYSFGILLLEILTGRKPIEKL-PGGVKRTITEWAEPLIVK-----GK 268
+ DV+S GI L+E+ P +L P V I + P + +
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
Query: 269 FKELVDPKLRGDFD 282
FK+ + L + D
Sbjct: 270 FKDFLKKCLEKNVD 283
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 116/268 (43%), Gaps = 30/268 (11%)
Query: 48 KLGEGGFGSVYWG-RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
K+GEG G V G Q+AVKK+ + EV ++ H N++ +
Sbjct: 52 KIGEGSTGIVCIATEKHTGKQVAVKKMDLRKQQRRELLFNEVVIMRDYHHDNVVDMYSSY 111
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
D+ +V +++ +L + E Q+ + + + YLH++ +I
Sbjct: 112 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----ATVCLSVLRALSYLHNQ---GVI 163
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRDIK+ ++LL SD ++DFGF + + V V GT ++APE
Sbjct: 164 HRDIKSDSILLTSDGRIKLSDFGFCAQVSKEVPKRKXLV-GTPYWMAPEVISRLPYGTEV 222
Query: 227 DVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKEL--VDPKLRGDFDE 283
D++S GI+++E++ G P + P R I + P + K+L V LRG D
Sbjct: 223 DIWSLGIMVIEMIDGEPPYFNEPPLQAMRRIRDSLPP-----RVKDLHKVSSVLRGFLD- 276
Query: 284 NQLKQAINVAVLCVQSEPEKRPNMKEVV 311
L + EP +R +E++
Sbjct: 277 -----------LMLVREPSQRATAQELL 293
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ MT V T Y APE + W
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWYRAPEIMLNWM 205
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ MT V T Y APE + W
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWYRAPEIMLNWM 205
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 85 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 132
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 230
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 68.2 bits (165), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ MT V T Y APE + W
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLAR---HTADEMTGYV-ATRWYRAPEIMLNWM 205
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 85 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 132
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 230
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 48/301 (15%)
Query: 41 NGFSDDNKLGEGGFGSVY----WG--RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGR 93
N S LG G FG V +G ++ + +AVK LK E E E++VL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 94 V-RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV--------------QL 138
+ H N++ L G C L++ +Y LL+ L + + L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 139 DWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV 198
D + + + A+G+ +L + + IHRD+ A N+LL + DFG A+ I
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARHIKNDS 222
Query: 199 SHMTTRVKGT----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+++ VKG + ++APE + DV+S+GI L E+ + G P +P
Sbjct: 223 NYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP---- 275
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
V KF +++ R E+ + ++ C ++P KRP K++V
Sbjct: 276 -----------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 324
Query: 314 L 314
+
Sbjct: 325 I 325
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 86
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 87 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 134
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 232
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 89 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 136
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 234
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 67/268 (25%), Positives = 123/268 (45%), Gaps = 28/268 (10%)
Query: 48 KLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGL-RGY 105
K+GEG G V R G Q+AVK + + EV ++ +H N++ + + Y
Sbjct: 52 KIGEGSTGIVCLAREKHSGRQVAVKMMDLRKQQRRELLFNEVVIMRDYQHFNVVEMYKSY 111
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
G ++ ++ +++ +L +V+L+ ++ + + + YLH + +
Sbjct: 112 LVG-EELWVLMEFLQGGAL-----TDIVSQVRLNEEQIATVCEAVLQALAYLHAQ---GV 162
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRDIK+ ++LL D ++DFGF I + V V GT ++APE +
Sbjct: 163 IHRDIKSDSILLTLDGRVKLSDFGFCAQISKDVPKRKXLV-GTPYWMAPEVISRSLYATE 221
Query: 226 CDVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
D++S GI+++E++ G P P + + + P K K V P LR DF E
Sbjct: 222 VDIWSLGIMVIEMVDGEPPYFSDSPVQAMKRLRDSPPP---KLKNSHKVSPVLR-DFLER 277
Query: 285 QLKQAINVAVLCVQSEPEKRPNMKEVVN 312
L + +P++R +E+++
Sbjct: 278 MLVR-----------DPQERATAQELLD 294
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 68.2 bits (165), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 89 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKCQHLSNDHICYFLYQ 136
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 234
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 67.8 bits (164), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL K S + E+ +L ++H+N++GL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 101 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 210
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 85 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 132
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 230
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 90 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 137
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 197
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 235
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 31 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 90
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 91 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 138
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 139 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 198
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 199 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 236
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 22 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 81
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 82 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 129
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 130 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 189
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 190 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 227
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 89 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 136
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 234
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYXQRTLREIKILLRFRHENII 88
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 89 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 136
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 234
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 83 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 130
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 228
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 97/206 (47%), Gaps = 19/206 (9%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFA-VEVEVLGRVRHKNLLGLRG 104
LG+G FG V T + I + K + ++E VE VL + L
Sbjct: 27 LGKGSFGKVMLADRKGTEELYAIKILKKDVVIQDDDVECTMVEKRVLALLDKPPFLTQLH 86
Query: 105 YCAGTDQRL-IVYDYMPNLSLLSHLH--GQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
C T RL V +Y+ L+ H+ G++ + + + I G+ +LH
Sbjct: 87 SCFQTVDRLYFVMEYVNGGDLMYHIQQVGKFKEPQAVFYAAEISI------GLFFLHKR- 139
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAK-LIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
II+RD+K NV+LDS+ +ADFG K + +GV+ T GT Y+APE +
Sbjct: 140 --GIIYRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVT--TREFCGTPDYIAPEIIAYQ 195
Query: 221 KVSESCDVYSFGILLLEILTGRKPIE 246
+S D +++G+LL E+L G+ P +
Sbjct: 196 PYGKSVDWWAYGVLLYEMLAGQPPFD 221
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 23 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 82
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 83 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 130
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 131 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 190
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 191 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 228
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 95/203 (46%), Gaps = 14/203 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 45 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLY- 103
Query: 105 YCAGTDQRLIV-YDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+C D++L Y N LL ++ + G R I SA + YLH +
Sbjct: 104 FCFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK--- 156
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 157 GIIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSA 216
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 217 CKSSDLWALGCIIYQLVAGLPPF 239
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 33 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 92
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 93 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 140
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 141 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 200
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 201 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 238
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 67.8 bits (164), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 85 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 132
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 230
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/291 (26%), Positives = 138/291 (47%), Gaps = 44/291 (15%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVKK-LKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+GEG +G V R D G +A+KK L++ + K + A+ E+++L ++RH+NL+ L
Sbjct: 33 VGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMREIKLLKQLRHENLVNLLEV 92
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
C + +V++++ + ++L L G LD++ K GI + H + +I
Sbjct: 93 CKKKKRWYLVFEFVDH-TILDDLELFPNG---LDYQVVQKYLFQIINGIGFCH---SHNI 145
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG-KVSE 224
IHRDIK N+L+ + DFGFA+ + V T Y APE + K +
Sbjct: 146 IHRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEV-ATRWYRAPELLVGDVKYGK 204
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDEN 284
+ DV++ G L+ E+ G +P+ PG I + ++ G P+ + F++N
Sbjct: 205 AVDVWAIGCLVTEMFMG-EPL--FPGD--SDIDQLYHIMMCLGNLI----PRHQELFNKN 255
Query: 285 ---------QLKQ--------------AINVAVLCVQSEPEKRPNMKEVVN 312
++K+ I++A C+ +P+KRP E+++
Sbjct: 256 PVFAGVRLPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAELLH 306
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
K+GEG +G VY + S G +A+K+++ A + E+ +L + H N++ L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA-EGILYLHHEVTPH 164
+V+++M L L G +Q ++KI + G+ + H
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTG-LQ---DSQIKIYLYQLLRGVAHCHQH---R 139
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG-KVS 223
I+HRD+K N+L++SD +ADFG A+ V T V TL Y AP+ M K S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPG 250
S D++S G + E++TG KP+ PG
Sbjct: 199 TSVDIWSIGCIFAEMITG-KPL--FPG 222
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 125/301 (41%), Gaps = 48/301 (15%)
Query: 41 NGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGR 93
N S LG G FG V ++ + +AVK LK E E E++VL
Sbjct: 46 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 105
Query: 94 V-RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV--------------QL 138
+ H N++ L G C L++ +Y LL+ L + + L
Sbjct: 106 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 165
Query: 139 DWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV 198
D + + + A+G+ +L + + IHRD+ A N+LL + DFG A+ I
Sbjct: 166 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 222
Query: 199 SHMTTRVKGT----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+++ VKG + ++APE + DV+S+GI L E+ + G P +P
Sbjct: 223 NYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP---- 275
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
V KF +++ R E+ + ++ C ++P KRP K++V
Sbjct: 276 -----------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 324
Query: 314 L 314
+
Sbjct: 325 I 325
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/301 (24%), Positives = 127/301 (42%), Gaps = 48/301 (15%)
Query: 41 NGFSDDNKLGEGGFGSVY----WG--RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGR 93
N S LG G FG V +G ++ + +AVK LK E E E++VL
Sbjct: 23 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 82
Query: 94 V-RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV--------------QL 138
+ H N++ L G C L++ +Y LL+ L + + L
Sbjct: 83 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 142
Query: 139 DWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV 198
D + + + A+G+ +L + + IHRD+ A N+LL + DFG A+ I
Sbjct: 143 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 199
Query: 199 SHMTTRVKGT----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+++ VKG + ++APE + DV+S+GI L E+ + G P +P
Sbjct: 200 NYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP---- 252
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
V KF +++ R E+ + ++ C ++P KRP K++V
Sbjct: 253 -----------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 301
Query: 314 L 314
+
Sbjct: 302 I 302
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 125/301 (41%), Gaps = 48/301 (15%)
Query: 41 NGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGR 93
N S LG G FG V ++ + +AVK LK E E E++VL
Sbjct: 41 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 100
Query: 94 V-RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV--------------QL 138
+ H N++ L G C L++ +Y LL+ L + + L
Sbjct: 101 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 160
Query: 139 DWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV 198
D + + + A+G+ +L + + IHRD+ A N+LL + DFG A+ I
Sbjct: 161 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 217
Query: 199 SHMTTRVKGT----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+++ VKG + ++APE + DV+S+GI L E+ + G P +P
Sbjct: 218 NYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP---- 270
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
V KF +++ R E+ + ++ C ++P KRP K++V
Sbjct: 271 -----------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 319
Query: 314 L 314
+
Sbjct: 320 I 320
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 106/228 (46%), Gaps = 26/228 (11%)
Query: 29 RIFTYKELHTATNGF---SDDNKLGEGGFGSVY-WGRTSDGLQIAVKKLKAMNSKAEMEF 84
RI T K+ A N F S LG G FG V+ T+ GL++A K +K K + E
Sbjct: 76 RIVTAKQ--GAVNSFYTVSKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEV 133
Query: 85 AVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRM 144
E+ V+ ++ H NL+ L + ++V +Y+ L + + +LD M
Sbjct: 134 KNEISVMNQLDHANLIQLYDAFESKNDIVLVMEYVDGGELFDRIIDESYNLTELDTILFM 193
Query: 145 KIAIGSAEGILYLHHEVTPHIIHRDIKASNVL-LDSDFEPL-VADFGFAKLIPEGVSHMT 202
K EGI ++H +I+H D+K N+L ++ D + + + DFG A+
Sbjct: 194 K---QICEGIRHMHQ---MYILHLDLKPENILCVNRDAKQIKIIDFGLAR-------RYK 240
Query: 203 TRVK-----GTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
R K GT +LAPE + VS D++S G++ +L+G P
Sbjct: 241 PREKLKVNFGTPEFLAPEVVNYDFVSFPTDMWSVGVIAYMLLSGLSPF 288
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 29/272 (10%)
Query: 43 FSDDNKLGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
F+ K+G+G FG V+ G RT + I + L+ + E E+ VL + +
Sbjct: 24 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYV 82
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
G + I+ +Y+ S L L E Q+ R + +G+ YLH
Sbjct: 83 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL-----KGLDYLHS 137
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
E IHRDIKA+NVLL E +ADFG A + + V GT ++APE
Sbjct: 138 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQ 193
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
D++S GI +E+ G P +L P+ V + P L G
Sbjct: 194 SAYDSKADIWSLGITAIELARGEPPHSEL------------HPMKVLFLIPKNNPPTLEG 241
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++ + LK+ + C+ EP RP KE++
Sbjct: 242 NYSK-PLKEFVEA---CLNKEPSFRPTAKELL 269
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 67.8 bits (164), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 45 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 104
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 105 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 152
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 153 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 212
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 213 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 250
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 91/205 (44%), Gaps = 17/205 (8%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LG+G FG V R T D + V K + ++E + E +L R+ L
Sbjct: 31 LGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQLF 90
Query: 105 YCAGTDQRLI-VYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
C T RL V +++ L+ H+ + D R A +++LH +
Sbjct: 91 CCFQTPDRLFFVMEFVNGGDLMFHIQKSR----RFDEARARFYAAEIISALMFLHDK--- 143
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAMWGK 221
II+RD+K NVLLD + +ADFG K EG+ + T GT Y+APE
Sbjct: 144 GIIYRDLKLDNVLLDHEGHCKLADFGMCK---EGICNGVTTATFCGTPDYIAPEILQEML 200
Query: 222 VSESCDVYSFGILLLEILTGRKPIE 246
+ D ++ G+LL E+L G P E
Sbjct: 201 YGPAVDWWAMGVLLYEMLCGHAPFE 225
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 203
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 115/272 (42%), Gaps = 29/272 (10%)
Query: 43 FSDDNKLGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
F+ K+G+G FG V+ G RT + I + L+ + E E+ VL + +
Sbjct: 9 FTKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDI-QQEITVLSQCDSPYV 67
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
G + I+ +Y+ S L L E Q+ R + +G+ YLH
Sbjct: 68 TKYYGSYLKDTKLWIIMEYLGGGSALDLLEPGPLDETQIATILREIL-----KGLDYLHS 122
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
E IHRDIKA+NVLL E +ADFG A + + V GT ++APE
Sbjct: 123 EKK---IHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQ 178
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
D++S GI +E+ G P +L P+ V + P L G
Sbjct: 179 SAYDSKADIWSLGITAIELARGEPPHSEL------------HPMKVLFLIPKNNPPTLEG 226
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++ + LK+ + C+ EP RP KE++
Sbjct: 227 NYSK-PLKEFVEA---CLNKEPSFRPTAKELL 254
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 74/301 (24%), Positives = 125/301 (41%), Gaps = 48/301 (15%)
Query: 41 NGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGR 93
N S LG G FG V ++ + +AVK LK E E E++VL
Sbjct: 39 NRLSFGKTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSY 98
Query: 94 V-RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV--------------QL 138
+ H N++ L G C L++ +Y LL+ L + + L
Sbjct: 99 LGNHMNIVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELAL 158
Query: 139 DWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV 198
D + + + A+G+ +L + + IHRD+ A N+LL + DFG A+ I
Sbjct: 159 DLEDLLSFSYQVAKGMAFL---ASKNCIHRDLAARNILLTHGRITKICDFGLARDIKNDS 215
Query: 199 SHMTTRVKGT----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+++ VKG + ++APE + DV+S+GI L E+ + G P +P
Sbjct: 216 NYV---VKGNARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPYPGMP---- 268
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
V KF +++ R E+ + ++ C ++P KRP K++V
Sbjct: 269 -----------VDSKFYKMIKEGFRMLSPEHAPAEMYDIMKTCWDADPLKRPTFKQIVQL 317
Query: 314 L 314
+
Sbjct: 318 I 318
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/207 (30%), Positives = 101/207 (48%), Gaps = 16/207 (7%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
K+GEG +G VY + S G +A+K+++ A + E+ +L + H N++ L
Sbjct: 28 KVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIREISLLKELHHPNIVSLIDV 87
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA-EGILYLHHEVTPH 164
+V+++M L L G +Q ++KI + G+ + H
Sbjct: 88 IHSERCLTLVFEFMEK-DLKKVLDENKTG-LQ---DSQIKIYLYQLLRGVAHCHQH---R 139
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG-KVS 223
I+HRD+K N+L++SD +ADFG A+ V T V TL Y AP+ M K S
Sbjct: 140 ILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVV-TLWYRAPDVLMGSKKYS 198
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPG 250
S D++S G + E++TG KP+ PG
Sbjct: 199 TSVDIWSIGCIFAEMITG-KPL--FPG 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 110/254 (43%), Gaps = 33/254 (12%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLRGYC 106
+LG+G FG VY + + +A K+ S+ E+E + VE+++L H N++ L
Sbjct: 44 ELGDGAFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL---- 99
Query: 107 AGTDQRLIVYDYMPNL-SLLSHLHGQYAGEVQLDWKRRMK------IAIGSAEGILYLHH 159
L + Y NL L+ G V L+ +R + + + + + YLH
Sbjct: 100 ------LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 153
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
IIHRD+KA N+L D + +ADFG + + + GT ++APE M
Sbjct: 154 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRXIQRRDXFI-GTPYWMAPEVVMC 209
Query: 220 GKVSE-----SCDVYSFGILLLEILTGRKPIEKL-PGGVKRTITEWAEPLIVK-----GK 268
+ DV+S GI L+E+ P +L P V I + P + +
Sbjct: 210 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 269
Query: 269 FKELVDPKLRGDFD 282
FK+ + L + D
Sbjct: 270 FKDFLKKCLEKNVD 283
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 25 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 84
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 85 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 132
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 133 ILRGLKYIHSANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATRW 192
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 193 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 230
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGXV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 203
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 87
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 88 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 141
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 142 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 197
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 198 HYNQTVDIWSVGCIMAELLTGR 219
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 100 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 153
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 154 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 209
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 86 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 195
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 200
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 148 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 203
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 67.4 bits (163), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 200
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 194
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 99
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 100 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 153
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 154 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 209
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 210 HYNQTVDIWSVGCIMAELLTGR 231
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 67.0 bits (162), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 95
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 96 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 149
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 150 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 205
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 206 HYNQTVDIWSVGCIMAELLTGR 227
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 85
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 86 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 139
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 140 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 195
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 196 HYNQTVDIWSVGCIMAELLTGR 217
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 86
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 87 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 140
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 141 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 196
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 197 HYNQTVDIWSVGCIMAELLTGR 218
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 111/221 (50%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A++K+ + + + E+++L R RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIRKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 89 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 136
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 196
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 234
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 101 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 210
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 100
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 101 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 154
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 155 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 210
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 211 HYNQTVDIWSVGCIMAELLTGR 232
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 145 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 200
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 204
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDXELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 204
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 109 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 218
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKXQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 108 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 161
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 217
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 67.0 bits (162), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 112 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 221
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 222 HYNQTVDIWSVGCIMAELLTGR 243
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 93
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 94 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 147
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 148 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 203
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLRGYC 106
+LG+G FG VY + + +A K+ S+ E+E + VE+E+L H ++ L G
Sbjct: 18 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 77
Query: 107 AGTDQRLIVYDYMP----NLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ I+ ++ P + +L G ++Q+ ++ + E + +LH +
Sbjct: 78 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-------EALNFLH---S 127
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
IIHRD+KA NVL+ + + +ADFG + + + + + GT ++APE M +
Sbjct: 128 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETM 186
Query: 223 SES-----CDVYSFGILLLEILTGRKPIEKL 248
++ D++S GI L+E+ P +L
Sbjct: 187 KDTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 149 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 204
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/202 (30%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 90
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 91 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 144
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 145 SADIIHRDLKPSNLAVNEDSELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 200
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 201 HYNQTVDIWSVGCIMAELLTGR 222
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 102/206 (49%), Gaps = 15/206 (7%)
Query: 43 FSDDNKLGEGGFGSVYW---GRTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHK 97
+ D +G G +G+V GRT G ++A+KKL + S+ + A E+ +L +RH+
Sbjct: 27 YRDLQPVGSGAYGAVCSAVDGRT--GAKVAIKKLYRPFQSELFAKRAYRELRLLKHMRHE 84
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++GL + D+ + + G+ +L R + +G+ Y+
Sbjct: 85 NVIGLLDVFTPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQFLVYQMLKGLRYI 144
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H IIHRD+K N+ ++ D E + DFG A+ + S M V T Y APE
Sbjct: 145 H---AAGIIHRDLKPGNLAVNEDCELKILDFGLAR---QADSEMXGXVV-TRWYRAPEVI 197
Query: 218 M-WGKVSESCDVYSFGILLLEILTGR 242
+ W + +++ D++S G ++ E++TG+
Sbjct: 198 LNWMRYTQTVDIWSVGCIMAEMITGK 223
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/211 (26%), Positives = 103/211 (48%), Gaps = 21/211 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLRGYC 106
+LG+G FG VY + + +A K+ S+ E+E + VE+E+L H ++ L G
Sbjct: 26 ELGDGAFGKVYKAKNKETGALAAAKVIETKSEEELEDYIVEIEILATCDHPYIVKLLGAY 85
Query: 107 AGTDQRLIVYDYMP----NLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ I+ ++ P + +L G ++Q+ ++ + E + +LH +
Sbjct: 86 YHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-------EALNFLH---S 135
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
IIHRD+KA NVL+ + + +ADFG + + + + + GT ++APE M +
Sbjct: 136 KRIIHRDLKAGNVLMTLEGDIRLADFGVSAKNLKTLQKRDSFI-GTPYWMAPEVVMCETM 194
Query: 223 SES-----CDVYSFGILLLEILTGRKPIEKL 248
++ D++S GI L+E+ P +L
Sbjct: 195 KDTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/292 (22%), Positives = 128/292 (43%), Gaps = 41/292 (14%)
Query: 49 LGEGGFGSVY------WGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T +Q+AVK LK +E E E++++ ++ H+N++
Sbjct: 53 LGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGSHENIV 112
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ----YAGEVQLDWKRRMK----IAIGSAE 152
L G C + ++++Y LL++L + E++ + ++R++ + + + E
Sbjct: 113 NLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNVLTFE 172
Query: 153 GILYLHHEVTP--------HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT- 203
+L ++V +HRD+ A NVL+ + DFG A+ I +++
Sbjct: 173 DLLCFAYQVAKGMEFLEFKSCVHRDLAARNVLVTHGKVVKICDFGLARDIMSDSNYVVRG 232
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
+ + ++APE G + DV+S+GILL EI + G P +P
Sbjct: 233 NARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFSLGVNPYPGIP------------- 279
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V F +L+ + D ++ + C + KRP+ + + L
Sbjct: 280 --VDANFYKLIQNGFKMDQPFYATEEIYIIMQSCWAFDSRKRPSFPNLTSFL 329
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFA-VEVEVLGRVRHKNLLGLRG 104
LG+G FG V T + + + K + ++E VE VL L
Sbjct: 28 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 87
Query: 105 YCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
C T RL V +Y+ L+ H+ Q G + + A A G+ +L +
Sbjct: 88 SCFQTMDRLYFVMEYVNGGDLMYHI--QQVG--RFKEPHAVFYAAEIAIGLFFLQ---SK 140
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKL-IPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
II+RD+K NV+LDS+ +ADFG K I +GV+ T GT Y+APE +
Sbjct: 141 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPY 198
Query: 223 SESCDVYSFGILLLEILTGRKPIE 246
+S D ++FG+LL E+L G+ P E
Sbjct: 199 GKSVDWWAFGVLLYEMLAGQAPFE 222
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/204 (31%), Positives = 95/204 (46%), Gaps = 15/204 (7%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFA-VEVEVLGRVRHKNLLGLRG 104
LG+G FG V T + + + K + ++E VE VL L
Sbjct: 349 LGKGSFGKVMLSERKGTDELYAVKILKKDVVIQDDDVECTMVEKRVLALPGKPPFLTQLH 408
Query: 105 YCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
C T RL V +Y+ L+ H+ Q G + + A A G+ +L +
Sbjct: 409 SCFQTMDRLYFVMEYVNGGDLMYHI--QQVG--RFKEPHAVFYAAEIAIGLFFLQ---SK 461
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKL-IPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
II+RD+K NV+LDS+ +ADFG K I +GV+ T GT Y+APE +
Sbjct: 462 GIIYRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVT--TKXFCGTPDYIAPEIIAYQPY 519
Query: 223 SESCDVYSFGILLLEILTGRKPIE 246
+S D ++FG+LL E+L G+ P E
Sbjct: 520 GKSVDWWAFGVLLYEMLAGQAPFE 543
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 97/203 (47%), Gaps = 16/203 (7%)
Query: 49 LGEGGFGSVYWGRTSDGLQ-IAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRGY 105
LG+G FG V + Q AVK + ++K + + EVE+L ++ H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ IV + L + + + D R +K GI Y+H +I
Sbjct: 90 LEDSSSFYIVGELYTGGELFDEIIKRKRFS-EHDAARIIKQVFS---GITYMHKH---NI 142
Query: 166 IHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRD+K N+LL+S D + + DFG + + + M R+ GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTY 199
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
E CDV+S G++L +L+G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF 222
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 101/205 (49%), Gaps = 25/205 (12%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 111
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 112 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 165
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG---TLGYLAPEYAM 218
+ IIHRD+K SN+ ++ D E + DFG A+ H + G T Y APE +
Sbjct: 166 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGYVATRWYRAPEIML 218
Query: 219 -WGKVSESCDVYSFGILLLEILTGR 242
W +++ D++S G ++ E+LTGR
Sbjct: 219 NWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 66.6 bits (161), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 70/302 (23%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
+F E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 5 VFVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 64
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 65 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 123
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I
Sbjct: 124 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 180
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E + KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 181 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 236
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + +C Q P+ RP+ E+++
Sbjct: 237 ----NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 283
Query: 313 TL 314
++
Sbjct: 284 SI 285
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 21/172 (12%)
Query: 145 KIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTR 204
KI + + + + +L + IIHRDIK SN+LLD + DFG + + + ++ TR
Sbjct: 129 KITLATVKALNHLKENL--KIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAK--TR 184
Query: 205 VKGTLGYLAPE----YAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWA 260
G Y+APE A DV+S GI L E+ TGR P K V +T+
Sbjct: 185 DAGCRPYMAPERIDPSASRQGYDVRSDVWSLGITLYELATGRFPYPKW-NSVFDQLTQ-- 241
Query: 261 EPLIVKGKFKELVDPKLRGDFDENQLKQA-INVAVLCVQSEPEKRPNMKEVV 311
+VKG DP + +E + + IN LC+ + KRP KE++
Sbjct: 242 ---VVKG------DPPQLSNSEEREFSPSFINFVNLCLTKDESKRPKYKELL 284
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 49 LGEGGFGSVYWGRTSDGLQ-IAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRGY 105
LG+G FG V + Q AVK + ++K + + EVE+L ++ H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ IV L L + + +I GI Y+H +I
Sbjct: 90 LEDSSSFYIV----GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NI 142
Query: 166 IHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRD+K N+LL+S D + + DFG + + + M R+ GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTY 199
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
E CDV+S G++L +L+G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF 222
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 66.2 bits (160), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/220 (27%), Positives = 105/220 (47%), Gaps = 30/220 (13%)
Query: 46 DNKLGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLG 101
D +LG G FGSV G + +A+K LK KA+ E E +++ ++ + ++
Sbjct: 341 DIELGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQLDNPYIVR 400
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
L G C L++ ++ LH G +R +I + + +L H+V
Sbjct: 401 LIGVCQAEALMLVM-----EMAGGGPLHKFLVG-------KREEIPVSNVAELL---HQV 445
Query: 162 T--------PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG--TLGY 211
+ + +HR++ A NVLL + ++DFG +K + S+ T R G L +
Sbjct: 446 SMGMKYLEEKNFVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKW 505
Query: 212 LAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
APE + K S DV+S+G+ + E L+ G+KP +K+ G
Sbjct: 506 YAPECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKG 545
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 102/212 (48%), Gaps = 22/212 (10%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYC 106
+GEG +G V ++A+KK+ + + + E+++L R RH+N++G+R
Sbjct: 51 IGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLREIQILLRFRHENVIGIRDIL 110
Query: 107 -AGTDQRL----IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
A T + + IV D M L L Q QL G+ Y+H
Sbjct: 111 RASTLEAMRDVYIVQDLM-ETDLYKLLKSQ-----QLSNDHICYFLYQILRGLKYIH--- 161
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLGYLAPEYAMW 219
+ +++HRD+K SN+L+++ + + DFG A++ H T T Y APE +
Sbjct: 162 SANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPEIMLN 221
Query: 220 GK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
K ++S D++S G +L E+L+ R PI PG
Sbjct: 222 SKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 250
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 59/203 (29%), Positives = 94/203 (46%), Gaps = 16/203 (7%)
Query: 49 LGEGGFGSVYWGRTSDGLQ-IAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRGY 105
LG+G FG V + Q AVK + ++K + + EVE+L ++ H N++ L
Sbjct: 30 LGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILREVELLKKLDHPNIMKLFEI 89
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ IV L L + + +I GI Y+H +I
Sbjct: 90 LEDSSSFYIV----GELYTGGELFDEIIKRKRFSEHDAARIIKQVFSGITYMHKH---NI 142
Query: 166 IHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRD+K N+LL+S D + + DFG + + + M R+ GT Y+APE + G
Sbjct: 143 VHRDLKPENILLESKEKDCDIKIIDFGLSTCFQQN-TKMKDRI-GTAYYIAPE-VLRGTY 199
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
E CDV+S G++L +L+G P
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPF 222
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 65.9 bits (159), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 36/301 (11%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 4 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 63
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ----- 137
EF E V+ +++ L G + L++ + M L S+L
Sbjct: 64 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 123
Query: 138 -LDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE 196
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I E
Sbjct: 124 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 180
Query: 197 GVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+ KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 181 -TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS---- 235
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
E +++G D +N + +C Q P+ RP+ E++++
Sbjct: 236 ---NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 283
Query: 314 L 314
+
Sbjct: 284 I 284
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 102/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + D+G A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDYGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 65.9 bits (159), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/301 (22%), Positives = 127/301 (42%), Gaps = 36/301 (11%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQ----- 137
EF E V+ +++ L G + L++ + M L S+L
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLA 133
Query: 138 -LDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPE 196
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I E
Sbjct: 134 PPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE 190
Query: 197 GVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVK 253
+ KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 191 -TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS---- 245
Query: 254 RTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNT 313
E +++G D +N + +C Q P+ RP+ E++++
Sbjct: 246 ---NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISS 293
Query: 314 L 314
+
Sbjct: 294 I 294
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGCLLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 152
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE S
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAS 212
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 29 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 88
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 89 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 136
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T
Sbjct: 137 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 196
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 197 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 234
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 65.5 bits (158), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L R RH+N++
Sbjct: 30 YTNLSYIGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLREIKILLRFRHENII 89
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 90 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 137
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T
Sbjct: 138 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRW 197
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 198 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 235
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 126
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 183
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E + KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 184 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 239
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + +C Q P+ RP+ E+++
Sbjct: 240 ----NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
Query: 313 TL 314
++
Sbjct: 287 SI 288
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 125
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E + KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 183 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 238
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + +C Q P+ RP+ E+++
Sbjct: 239 ----NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
Query: 313 TL 314
++
Sbjct: 286 SI 287
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 65.5 bits (158), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 85/289 (29%), Positives = 128/289 (44%), Gaps = 46/289 (15%)
Query: 41 NGFSDD----NKLGEGGFGSVYWGRTS-DGLQIAVKKLK------AMNSKAEMEFAVEVE 89
G SD KLG G +G V + G + A+K +K NS A ++ EV
Sbjct: 17 QGLSDRYQRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD---EVA 73
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH--LHGQYAGEVQLDWKRRMKIA 147
VL ++ H N++ L + +V + L L +++ ++D MK
Sbjct: 74 VLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIMKQV 130
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTR 204
+ G YLH +I+HRD+K N+LL+S D + DFG + G M R
Sbjct: 131 LS---GTTYLHKH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKER 183
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLI 264
+ GT Y+APE + K E CDV+S G++L +L G P G + I + E
Sbjct: 184 L-GTAYYIAPE-VLRKKYDEKCDVWSCGVILYILLCGYPP---FGGQTDQEILKRVE--- 235
Query: 265 VKGKFKELVDPKLRGDFDENQLK-QAINVAVLCVQSEPEKRPNMKEVVN 312
KGKF DP D Q+ +A + L + EP KR + +E +N
Sbjct: 236 -KGKFS--FDPP-----DWTQVSDEAKQLVKLMLTYEPSKRISAEEALN 276
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L RH+N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 87 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 134
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 232
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKSQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG + + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDSELKILDFGLCRHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 65.1 bits (157), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 82/278 (29%), Positives = 125/278 (44%), Gaps = 42/278 (15%)
Query: 48 KLGEGGFGSVYWGRTS-DGLQIAVKKLK------AMNSKAEMEFAVEVEVLGRVRHKNLL 100
KLG G +G V + G + A+K +K NS A ++ EV VL ++ H N++
Sbjct: 11 KLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLD---EVAVLKQLDHPNIM 67
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSH--LHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
L + +V + L L +++ ++D MK + G YLH
Sbjct: 68 KLYEFFEDKRNYYLVMEVYRGGELFDEIILRQKFS---EVDAAVIMKQVLS---GTTYLH 121
Query: 159 HEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPE 215
+I+HRD+K N+LL+S D + DFG + G M R+ GT Y+APE
Sbjct: 122 KH---NIVHRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG-GKMKERL-GTAYYIAPE 176
Query: 216 YAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDP 275
+ K E CDV+S G++L +L G P G + I + E KGKF DP
Sbjct: 177 -VLRKKYDEKCDVWSCGVILYILLCGYPP---FGGQTDQEILKRVE----KGKFS--FDP 226
Query: 276 KLRGDFDENQLK-QAINVAVLCVQSEPEKRPNMKEVVN 312
D Q+ +A + L + EP KR + +E +N
Sbjct: 227 P-----DWTQVSDEAKQLVKLMLTYEPSKRISAEEALN 259
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 36 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 95
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 96 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 154
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I
Sbjct: 155 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 211
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E + KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 212 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 267
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + +C Q P+ RP+ E+++
Sbjct: 268 ----NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 314
Query: 313 TL 314
++
Sbjct: 315 SI 316
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 7 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 66
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 67 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 125
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I
Sbjct: 126 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 182
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E + KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 183 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 238
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + +C Q P+ RP+ E+++
Sbjct: 239 ----NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 285
Query: 313 TL 314
++
Sbjct: 286 SI 287
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 65.1 bits (157), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 130/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 8 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 67
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 68 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 126
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I
Sbjct: 127 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIX 183
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 184 E-TDXXRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 239
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + +C Q P+ RP+ E+++
Sbjct: 240 ----NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 286
Query: 313 TL 314
++
Sbjct: 287 SI 288
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G FG V+ G+ G ++AVK +S+ E + E E+ V RH+N+LG +
Sbjct: 12 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILG---FI 64
Query: 107 AGTD-------QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
A + Q +V DY + SL +L+ +Y V+ +K+A+ +A G+ +LH
Sbjct: 65 AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVE----GMIKLALSTASGLAHLHM 119
Query: 160 EVT-----PHIIHRDIKASNVLLDSDFEPLVADFGFA---KLIPEGVSHMTTRVKGTLGY 211
E+ P I HRD+K+ N+L+ + +AD G A + + GT Y
Sbjct: 120 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 179
Query: 212 LAPEY---AMWGKVSES---CDVYSFGILLLEI 238
+APE ++ K ES D+Y+ G++ EI
Sbjct: 180 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G FG V+ G+ G ++AVK +S+ E + E E+ V RH+N+LG +
Sbjct: 14 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILG---FI 66
Query: 107 AGTD-------QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
A + Q +V DY + SL +L+ +Y V+ +K+A+ +A G+ +LH
Sbjct: 67 AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVE----GMIKLALSTASGLAHLHM 121
Query: 160 EVT-----PHIIHRDIKASNVLLDSDFEPLVADFGFA---KLIPEGVSHMTTRVKGTLGY 211
E+ P I HRD+K+ N+L+ + +AD G A + + GT Y
Sbjct: 122 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 181
Query: 212 LAPEY---AMWGKVSES---CDVYSFGILLLEI 238
+APE ++ K ES D+Y+ G++ EI
Sbjct: 182 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 110/221 (49%), Gaps = 28/221 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLL 100
+++ + +GEG +G V + + +++A+KK+ + + + E+++L RH+N++
Sbjct: 27 YTNLSYIGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLREIKILLAFRHENII 86
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G+ R + M ++ ++ L ++ D + +K S + I Y ++
Sbjct: 87 GINDII-----RAPTIEQMKDVYIVQDL-------METDLYKLLKTQHLSNDHICYFLYQ 134
Query: 161 V--------TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH--MTTRVKGTLG 210
+ + +++HRD+K SN+LL++ + + DFG A++ H T T
Sbjct: 135 ILRGLKYIHSANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRW 194
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPIEKLPG 250
Y APE + K ++S D++S G +L E+L+ R PI PG
Sbjct: 195 YRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR-PI--FPG 232
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 64.7 bits (156), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 14 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 73
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 74 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 132
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I
Sbjct: 133 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIY 189
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E + KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 190 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 245
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + +C Q P+ RP+ E+++
Sbjct: 246 ----NEQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIIS 292
Query: 313 TL 314
++
Sbjct: 293 SI 294
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 41/238 (17%)
Query: 36 LHTATNGFSDDNKLGEGGFGSVYWG-RTSDGLQIAVKKLKAMNSKAEMEFAV----EVEV 90
++ ++ F + LGEG +G V G +A+KK++ + FA+ E+++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKI 62
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L +H+N++ + QR ++ + ++ L +Q D R + + S
Sbjct: 63 LKHFKHENIITIFNI-----QRPDSFENFNEVYIIQEL-------MQTDLHRVISTQMLS 110
Query: 151 AEGILYLHHEVT--------PHIIHRDIKASNVLLDSDFEPLVADFGFAKLI-------- 194
+ I Y ++ ++IHRD+K SN+L++S+ + V DFG A++I
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 195 -PEGVSHMTTRVKGTLGYLAPEYAMW-GKVSESCDVYSFGILLLEILTGRKPIEKLPG 250
P G T T Y APE + K S + DV+S G +L E+ R+PI PG
Sbjct: 171 EPTGQQSGMTEXVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI--FPG 225
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G FG V+ G+ G ++AVK +S+ E + E E+ V RH+N+LG +
Sbjct: 37 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILG---FI 89
Query: 107 AGTD-------QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
A + Q +V DY + SL +L+ +Y V+ +K+A+ +A G+ +LH
Sbjct: 90 AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVE----GMIKLALSTASGLAHLHM 144
Query: 160 EVT-----PHIIHRDIKASNVLLDSDFEPLVADFGFA---KLIPEGVSHMTTRVKGTLGY 211
E+ P I HRD+K+ N+L+ + +AD G A + + GT Y
Sbjct: 145 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 204
Query: 212 LAPEY---AMWGKVSES---CDVYSFGILLLEI 238
+APE ++ K ES D+Y+ G++ EI
Sbjct: 205 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G FG V+ G+ G ++AVK +S+ E + E E+ V RH+N+LG +
Sbjct: 17 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILG---FI 69
Query: 107 AGTD-------QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
A + Q +V DY + SL +L+ +Y V+ +K+A+ +A G+ +LH
Sbjct: 70 AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVE----GMIKLALSTASGLAHLHM 124
Query: 160 EVT-----PHIIHRDIKASNVLLDSDFEPLVADFGFA---KLIPEGVSHMTTRVKGTLGY 211
E+ P I HRD+K+ N+L+ + +AD G A + + GT Y
Sbjct: 125 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 184
Query: 212 LAPEY---AMWGKVSES---CDVYSFGILLLEI 238
+APE ++ K ES D+Y+ G++ EI
Sbjct: 185 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 61/212 (28%), Positives = 99/212 (46%), Gaps = 23/212 (10%)
Query: 46 DNKLGEGGFGSVYWGRTSDG----LQIAVKKLKAMNSKAEMEFAVEVEVLGR-VRHKNLL 100
D +G+G FG VY G D +Q A+K L + ++E + +L R + H N+L
Sbjct: 26 DRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRGLNHPNVL 85
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHG---QYAGEVQLDWKRRMKIAIG--SAEGIL 155
L G ++ + +P++ L HG Q+ Q + + I+ G A G+
Sbjct: 86 ALIGI-------MLPPEGLPHVLLPYMCHGDLLQFIRSPQRNPTVKDLISFGLQVARGME 138
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTR---VKGTLGYL 212
YL + +HRD+ A N +LD F VADFG A+ I + + + + + +
Sbjct: 139 YLAEQ---KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPVKWT 195
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
A E + + DV+SFG+LL E+LT P
Sbjct: 196 ALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G FG V+ G+ G ++AVK +S+ E + E E+ V RH+N+LG +
Sbjct: 50 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILG---FI 102
Query: 107 AGTD-------QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
A + Q +V DY + SL +L+ +Y V+ +K+A+ +A G+ +LH
Sbjct: 103 AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVE----GMIKLALSTASGLAHLHM 157
Query: 160 EVT-----PHIIHRDIKASNVLLDSDFEPLVADFGFA---KLIPEGVSHMTTRVKGTLGY 211
E+ P I HRD+K+ N+L+ + +AD G A + + GT Y
Sbjct: 158 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 217
Query: 212 LAPEY---AMWGKVSES---CDVYSFGILLLEI 238
+APE ++ K ES D+Y+ G++ EI
Sbjct: 218 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/213 (29%), Positives = 105/213 (49%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G FG V+ G+ G ++AVK +S+ E + E E+ V RH+N+LG +
Sbjct: 11 IGKGRFGEVWRGKWR-GEEVAVK---IFSSREERSWFREAEIYQTVMLRHENILG---FI 63
Query: 107 AGTD-------QRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
A + Q +V DY + SL +L+ +Y V+ +K+A+ +A G+ +LH
Sbjct: 64 AADNKDNGTWTQLWLVSDYHEHGSLFDYLN-RYTVTVE----GMIKLALSTASGLAHLHM 118
Query: 160 EVT-----PHIIHRDIKASNVLLDSDFEPLVADFGFA---KLIPEGVSHMTTRVKGTLGY 211
E+ P I HRD+K+ N+L+ + +AD G A + + GT Y
Sbjct: 119 EIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGTKRY 178
Query: 212 LAPEY---AMWGKVSES---CDVYSFGILLLEI 238
+APE ++ K ES D+Y+ G++ EI
Sbjct: 179 MAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 64.7 bits (156), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/205 (29%), Positives = 94/205 (45%), Gaps = 18/205 (8%)
Query: 48 KLGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
KLG G +G V R T I + + ++++ + + EV VL + H N++ L
Sbjct: 44 KLGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYD 103
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL-HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+ +V + L + H EV D +K + G+ YLH
Sbjct: 104 FFEDKRNYYLVMECYKGGELFDEIIHRMKFNEV--DAAVIIKQVLS---GVTYLHKH--- 155
Query: 164 HIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
+I+HRD+K N+LL+S D + DFG + + E M R+ GT Y+APE +
Sbjct: 156 NIVHRDLKPENLLLESKEKDALIKIVDFGLSAVF-ENQKKMKERL-GTAYYIAPE-VLRK 212
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
K E CDV+S G++L +L G P
Sbjct: 213 KYDEKCDVWSIGVILFILLAGYPPF 237
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 70/298 (23%), Positives = 126/298 (42%), Gaps = 46/298 (15%)
Query: 34 KELHTATNGFSDDNK-------LGEGGFGSVYWG-RTSDGLQIAVKKL--KAMNSKAEME 83
+EL T G S+D + +G G F +VY G T +++A +L + +
Sbjct: 12 EELETKAVGXSNDGRFLKFDIEIGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQR 71
Query: 84 FAVEVEVLGRVRHKNLLGL----RGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQL- 138
F E E L ++H N++ G ++V + + +L ++L ++++
Sbjct: 72 FKEEAEXLKGLQHPNIVRFYDSWESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVL 131
Query: 139 -DWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPE 196
W R++ +G+ +LH TP IIHRD+K N+ + + + D G A L
Sbjct: 132 RSWCRQI------LKGLQFLHTR-TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATL--- 181
Query: 197 GVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVK--R 254
+ V GT + APE K ES DVY+FG LE T P + + R
Sbjct: 182 KRASFAKAVIGTPEFXAPE-XYEEKYDESVDVYAFGXCXLEXATSEYPYSECQNAAQIYR 240
Query: 255 TITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
+T +P FD+ + + + C++ ++R ++K+++N
Sbjct: 241 RVTSGVKP----------------ASFDKVAIPEVKEIIEGCIRQNKDERYSIKDLLN 282
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 62/238 (26%), Positives = 109/238 (45%), Gaps = 41/238 (17%)
Query: 36 LHTATNGFSDDNKLGEGGFGSVYWG-RTSDGLQIAVKKLKAMNSKAEMEFAV----EVEV 90
++ ++ F + LGEG +G V G +A+KK++ + FA+ E+++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKI 62
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L +H+N++ + QR ++ + ++ L +Q D R + + S
Sbjct: 63 LKHFKHENIITIFNI-----QRPDSFENFNEVYIIQEL-------MQTDLHRVISTQMLS 110
Query: 151 AEGILYLHHEVT--------PHIIHRDIKASNVLLDSDFEPLVADFGFAKLI-------- 194
+ I Y ++ ++IHRD+K SN+L++S+ + V DFG A++I
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 195 -PEGVSHMTTRVKGTLGYLAPEYAMW-GKVSESCDVYSFGILLLEILTGRKPIEKLPG 250
P G T T Y APE + K S + DV+S G +L E+ R+PI PG
Sbjct: 171 EPTGQQSGMTEYVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI--FPG 225
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 64.7 bits (156), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 69/302 (22%), Positives = 131/302 (43%), Gaps = 38/302 (12%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEM 82
++ E A + +LG+G FG VY G + ++A+K + +A + + +
Sbjct: 1 VYVPDEWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERI 60
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD--- 139
EF E V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 61 EFLNEASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVL 119
Query: 140 ----WKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ +++A A+G+ YL+ +HRD+ A N + DF + DFG + I
Sbjct: 120 APPSLSKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIY 176
Query: 196 EGVSHMTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGV 252
E + KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 177 E-TDYYRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS--- 232
Query: 253 KRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
E +++G D +N + + +C Q P+ RP+ E+++
Sbjct: 233 ----NEQVLRFVMEGGLL---------DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIIS 279
Query: 313 TL 314
++
Sbjct: 280 SI 281
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 64.3 bits (155), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G +G V W + G +AVK +S+ E + E E+ V RH+N+LG
Sbjct: 16 VGKGRYGEV-WRGSWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGF---- 67
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHG-----QYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
+D + L L++H H Y LD ++I + A G+ +LH E+
Sbjct: 68 IASD--MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 162 -----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT----RVKGTLGYL 212
P I HRD+K+ N+L+ + + +AD G A + + + + RV GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYM 184
Query: 213 APEYAMWGKVSESC-------DVYSFGILLLEI 238
APE + + C D+++FG++L E+
Sbjct: 185 APE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G +G V W + G +AVK +S+ E + E E+ V RH+N+LG
Sbjct: 16 VGKGRYGEV-WRGSWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGF---- 67
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHG-----QYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
+D + L L++H H Y LD ++I + A G+ +LH E+
Sbjct: 68 IASD--MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 125
Query: 162 -----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT----RVKGTLGYL 212
P I HRD+K+ N+L+ + + +AD G A + + + + RV GT Y+
Sbjct: 126 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYM 184
Query: 213 APEYAMWGKVSESC-------DVYSFGILLLEI 238
APE + + C D+++FG++L E+
Sbjct: 185 APE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 98
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 99 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 152
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 153 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 208
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 209 HYNQTVDIWSVGCIMAELLTGR 230
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/203 (29%), Positives = 99/203 (48%), Gaps = 21/203 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG- 104
+G G +GSV GL+IAVKKL + S + E+ +L ++H+N++GL
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLDV 118
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHE 160
+ T + ++ L++HL G + +L + G+ Y+H
Sbjct: 119 FTPATS-----LEEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH-- 171
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-W 219
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 172 -SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNW 226
Query: 220 GKVSESCDVYSFGILLLEILTGR 242
+ + D++S G ++ E+LTGR
Sbjct: 227 MHYNMTVDIWSVGCIMAELLTGR 249
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 38/297 (12%)
Query: 35 ELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEMEFAVE 87
E A + +LG+G FG VY G + ++A+K + +A + + +EF E
Sbjct: 4 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 63
Query: 88 VEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD-------W 140
V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 64 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSL 122
Query: 141 KRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH 200
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I E
Sbjct: 123 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXE-TDX 178
Query: 201 MTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTIT 257
KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 179 XRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-------N 231
Query: 258 EWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
E +++G D +N + + +C Q P+ RP+ E+++++
Sbjct: 232 EQVLRFVMEGGLL---------DKPDNCPDMLLELMRMCWQYNPKMRPSFLEIISSI 279
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRGY 105
K+GEG +G VY + + G A+KK++ + E+ +L ++H N++ L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------------- 152
+ ++V++++ D K+ + + G E
Sbjct: 69 IHTKKRLVLVFEHLDQ-----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYL 212
GI Y H ++HRD+K N+L++ + E +ADFG A+ V T V TL Y
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYR 167
Query: 213 APEYAMWG-KVSESCDVYSFGILLLEILTG 241
AP+ M K S + D++S G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V R + G A+K L+ A+ E A E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + E +R + Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEY 120
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH + +++RDIK N++LD D + DFG K EG+S T GT YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 18 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 77
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ G R I SA + YLH +
Sbjct: 78 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSA--LEYLHGK---G 130
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 131 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 190
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 191 KSSDLWALGCIIYQLVAGLPPF 212
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V R + G A+K L+ A+ E A E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + E +R + Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEY 120
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH + +++RDIK N++LD D + DFG K EG+S T GT YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAP 174
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 129/297 (43%), Gaps = 38/297 (12%)
Query: 35 ELHTATNGFSDDNKLGEGGFGSVYWG------RTSDGLQIAVKKL-KAMNSKAEMEFAVE 87
E A + +LG+G FG VY G + ++A+K + +A + + +EF E
Sbjct: 6 EWEVAREKITMSRELGQGSFGMVYEGVAKGVVKDEPETRVAIKTVNEAASMRERIEFLNE 65
Query: 88 VEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLD-------W 140
V+ +++ L G + L++ + M L S+L E++ +
Sbjct: 66 ASVMKEFNCHHVVRLLGVVSQGQPTLVIMELMTRGDLKSYLRS-LRPEMENNPVLAPPSL 124
Query: 141 KRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH 200
+ +++A A+G+ YL+ +HRD+ A N ++ DF + DFG + I E +
Sbjct: 125 SKMIQMAGEIADGMAYLNAN---KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYE-TDY 180
Query: 201 MTTRVKGTLG--YLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTIT 257
KG L +++PE G + DV+SFG++L EI T +P + L
Sbjct: 181 YRKGGKGLLPVRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLS-------N 233
Query: 258 EWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
E +++G D +N + +C Q P+ RP+ E+++++
Sbjct: 234 EQVLRFVMEGGLL---------DKPDNCPDMLFELMRMCWQYNPKMRPSFLEIISSI 281
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V R + G A+K L+ A+ E A E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + E +R + Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEY 120
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH + +++RDIK N++LD D + DFG K EG+S T GT YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 53/210 (25%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRGY 105
K+GEG +G VY + + G A+KK++ + E+ +L ++H N++ L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------------- 152
+ ++V++++ D K+ + + G E
Sbjct: 69 IHTKKRLVLVFEHLDQ-----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYL 212
GI Y H ++HRD+K N+L++ + E +ADFG A+ V T V TL Y
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVV-TLWYR 167
Query: 213 APEYAMWG-KVSESCDVYSFGILLLEILTG 241
AP+ M K S + D++S G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 17 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 76
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ G R I SA + YLH +
Sbjct: 77 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSA--LEYLHGK---G 129
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 130 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 189
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 190 KSSDLWALGCIIYQLVAGLPPF 211
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 94
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 95 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 148
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 149 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 204
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 205 HYNQTVDIWSVGCIMAELLTGR 226
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V R + G A+K L+ A+ E A E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + E +R + Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEY 120
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH + +++RDIK N++LD D + DFG K EG+S T GT YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 174
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 107
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 108 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 161
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 162 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 217
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 218 HYNQTVDIWSVGCIMAELLTGR 239
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V R + G A+K L+ A+ E A E VL RH
Sbjct: 5 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 64
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + E +R + Y
Sbjct: 65 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEY 120
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH + +++RDIK N++LD D + DFG K EG+S T GT YLAP
Sbjct: 121 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAP 174
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 205
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 194
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 100/213 (46%), Gaps = 35/213 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRV--RHKNLLGLRGYC 106
+G+G +G V W + G +AVK +S+ E + E E+ V RH+N+LG
Sbjct: 45 VGKGRYGEV-WRGSWQGENVAVK---IFSSRDEKSWFRETELYNTVMLRHENILGF---- 96
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHG-----QYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
+D + L L++H H Y LD ++I + A G+ +LH E+
Sbjct: 97 IASD--MTSRHSSTQLWLITHYHEMGSLYDYLQLTTLDTVSCLRIVLSIASGLAHLHIEI 154
Query: 162 -----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT----RVKGTLGYL 212
P I HRD+K+ N+L+ + + +AD G A + + + + RV GT Y+
Sbjct: 155 FGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQSTNQLDVGNNPRV-GTKRYM 213
Query: 213 APEYAMWGKVSESC-------DVYSFGILLLEI 238
APE + + C D+++FG++L E+
Sbjct: 214 APE-VLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V R + G A+K L+ A+ E A E VL RH
Sbjct: 10 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 69
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + E +R + Y
Sbjct: 70 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEY 125
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH + +++RDIK N++LD D + DFG K EG+S T GT YLAP
Sbjct: 126 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKXFCGTPEYLAP 179
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 15 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 74
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ G R I SA + YLH +
Sbjct: 75 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSA--LEYLHGK---G 127
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 128 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 187
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 188 KSSDLWALGCIIYQLVAGLPPF 209
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 64.3 bits (155), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 109 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 218
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 219 HYNQTVDIWSVGCIMAELLTGR 240
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 89/211 (42%), Gaps = 16/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V R + G A+K L+ A+ E A E VL RH
Sbjct: 8 NDFDYLKLLGKGTFGKVILVREKATGRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRH 67
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + E +R + Y
Sbjct: 68 PFLTALKYAFQTHDRLCFVMEYANGGELFFHL----SRERVFTEERARFYGAEIVSALEY 123
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH + +++RDIK N++LD D + DFG K EG+S T GT YLAP
Sbjct: 124 LH---SRDVVYRDIKLENLMLDKDGHIKITDFGLCK---EGISDGATMKTFCGTPEYLAP 177
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 208
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 16 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 75
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ G R I SA + YLH +
Sbjct: 76 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSA--LEYLHGK---G 128
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 129 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 188
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 189 KSSDLWALGCIIYQLVAGLPPF 210
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 104/206 (50%), Gaps = 27/206 (13%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV---- 161
T R + + ++ L++HL G D +K A + + + +L +++
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGA-------DLNNIVKCAKLTDDHVQFLIYQILRGL 134
Query: 162 ----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE
Sbjct: 135 KYIHSADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIM 190
Query: 218 M-WGKVSESCDVYSFGILLLEILTGR 242
+ W +++ D++S G ++ E+LTGR
Sbjct: 191 LNWMHYNQTVDIWSVGCIMAELLTGR 216
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + ++ T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + ++ T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V + + G A+K LK A+ E A E VL RH
Sbjct: 151 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 210
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + D R I SA + Y
Sbjct: 211 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA--LDY 266
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKL-IPEGVSHMTTRVKGTLGYLAPE 215
LH E ++++RD+K N++LD D + DFG K I +G + T GT YLAPE
Sbjct: 267 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPE 322
Query: 216 YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ D + G+++ E++ GR P
Sbjct: 323 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 352
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 153
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 213
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPF 235
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 41 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 100
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 101 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 153
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 154 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 213
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 214 KSSDLWALGCIIYQLVAGLPPF 235
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/210 (30%), Positives = 92/210 (43%), Gaps = 13/210 (6%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V + + G A+K LK A+ E A E VL RH
Sbjct: 148 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 207
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + D R I SA + Y
Sbjct: 208 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA--LDY 263
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKL-IPEGVSHMTTRVKGTLGYLAPE 215
LH E ++++RD+K N++LD D + DFG K I +G + T GT YLAPE
Sbjct: 264 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKT--FCGTPEYLAPE 319
Query: 216 YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ D + G+++ E++ GR P
Sbjct: 320 VLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 349
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 152
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 63.9 bits (154), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AVK + +NS + + EV ++ + H N++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS-----AVQYCHQKF-- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G + G+ Y APE K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDTFCGSPPYAAPELFQGKKYD 190
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + FG A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILGFGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/210 (24%), Positives = 93/210 (44%), Gaps = 37/210 (17%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRGY 105
K+GEG +G VY + + G A+KK++ + E+ +L ++H N++ L
Sbjct: 9 KIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIREISILKELKHSNIVKLYDV 68
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------------- 152
+ ++V++++ D K+ + + G E
Sbjct: 69 IHTKKRLVLVFEHLDQ-----------------DLKKLLDVCEGGLESVTAKSFLLQLLN 111
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYL 212
GI Y H ++HRD+K N+L++ + E +ADFG A+ V T + TL Y
Sbjct: 112 GIAYCHDR---RVLHRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIV-TLWYR 167
Query: 213 APEYAMWG-KVSESCDVYSFGILLLEILTG 241
AP+ M K S + D++S G + E++ G
Sbjct: 168 APDVLMGSKKYSTTIDIWSVGCIFAEMVNG 197
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ KA ++ E++++ ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHC 73
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 131
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 188 ----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 108/240 (45%), Gaps = 20/240 (8%)
Query: 48 KLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGL-RGY 105
K+GEG G V S G +AVKK+ + EV ++ +H+N++ + Y
Sbjct: 158 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 217
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
G D+ +V +++ +L + E Q+ + + + + LH + +
Sbjct: 218 LVG-DELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---GV 268
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRDIK+ ++LL D ++DFGF + + V V GT ++APE
Sbjct: 269 IHRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPE 327
Query: 226 CDVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKEL--VDPKLRGDFD 282
D++S GI+++E++ G P + P + I + P + K L V P L+G D
Sbjct: 328 VDIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-----RLKNLHKVSPSLKGFLD 382
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLKA--MNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AVK + +NS + + EV ++ + H N++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS-----AVQYCHQKF-- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G T G+ Y APE K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYD 190
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 150
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + D G A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDAGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 58/205 (28%), Positives = 100/205 (48%), Gaps = 25/205 (12%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 108
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 109 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 162
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG---YLAPEYAM 218
+ IIHRD+K SN+ ++ D E + DFG A+ H + G + Y APE +
Sbjct: 163 SADIIHRDLKPSNLAVNEDCELKILDFGLAR-------HTDDEMXGXVATRWYRAPEIML 215
Query: 219 -WGKVSESCDVYSFGILLLEILTGR 242
W +++ D++S G ++ E+LTGR
Sbjct: 216 NWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 57/202 (28%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 85 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 138
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DFG A+ + ++ T Y APE + W
Sbjct: 139 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFV----ATRWYRAPEIMLNWM 194
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 152
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 99/208 (47%), Gaps = 20/208 (9%)
Query: 47 NKLGEGGFGSVYWGRTS-DGLQIAVK-----KLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
+ LG G FG V G+ G ++AVK K+++++ ++ E++ L RH +++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGKIR--REIQNLKLFRHPHII 79
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L + +V +Y+ L ++ +LD K ++ G+ Y H
Sbjct: 80 KLYQVISTPSDIFMVMEYVSGGELFDYI----CKNGRLDEKESRRLFQQILSGVDYCHRH 135
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
+ ++HRD+K NVLLD+ +ADFG + ++ +G G+ Y APE + G
Sbjct: 136 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRXSCGSPNYAAPE-VISG 189
Query: 221 KV--SESCDVYSFGILLLEILTGRKPIE 246
++ D++S G++L +L G P +
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLPFD 217
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 150
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 48 KLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
K+GEG G V S G +AVKK+ + EV ++ +H+N++ +
Sbjct: 38 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 97
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
D+ +V +++ +L + E Q+ + + + + LH + +I
Sbjct: 98 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---GVI 149
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRDIK+ ++LL D ++DFGF + + V V GT ++APE
Sbjct: 150 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 208
Query: 227 DVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKEL--VDPKLRGDFD 282
D++S GI+++E++ G P + P + I + P + K L V P L+G D
Sbjct: 209 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-----RLKNLHKVSPSLKGFLD 262
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/232 (29%), Positives = 113/232 (48%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ KA ++ E++++ ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHC 73
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 131
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 188 ----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 152
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 48 KLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
K+GEG G V S G +AVKK+ + EV ++ +H+N++ +
Sbjct: 36 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 95
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
D+ +V +++ +L + E Q+ + + + + LH + +I
Sbjct: 96 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---GVI 147
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRDIK+ ++LL D ++DFGF + + V V GT ++APE
Sbjct: 148 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 206
Query: 227 DVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKEL--VDPKLRGDFD 282
D++S GI+++E++ G P + P + I + P + K L V P L+G D
Sbjct: 207 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-----RLKNLHKVSPSLKGFLD 260
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 22 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 81
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ G R I SA + YLH +
Sbjct: 82 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSA--LEYLHGK---G 134
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 135 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 194
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 195 KSSDLWALGCIIYQLVAGLPPF 216
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ G R I SA + YLH +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSA--LEYLHGK---G 149
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLTEKSAC 209
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPF 231
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 43 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 102
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 103 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 155
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 156 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 215
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 216 KSSDLWALGCIIYQLVAGLPPF 237
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + D G A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDRGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 152
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 212
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 38 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 150
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLTEKSAC 210
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 37 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 96
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ G R I SA + YLH +
Sbjct: 97 TFQDDEKLYFGLSYAKNGELLKYIRK--IGSFDETCTRFYTAEIVSA--LEYLHGK---G 149
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 150 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 209
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 210 KSSDLWALGCIIYQLVAGLPPF 231
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 48 KLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
K+GEG G V S G +AVKK+ + EV ++ +H+N++ +
Sbjct: 81 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 140
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
D+ +V +++ +L + E Q+ + + + + LH + +I
Sbjct: 141 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---GVI 192
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRDIK+ ++LL D ++DFGF + + V V GT ++APE
Sbjct: 193 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 251
Query: 227 DVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKEL--VDPKLRGDFD 282
D++S GI+++E++ G P + P + I + P + K L V P L+G D
Sbjct: 252 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-----RLKNLHKVSPSLKGFLD 305
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 48 KLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
K+GEG G V S G +AVKK+ + EV ++ +H+N++ +
Sbjct: 27 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 86
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
D+ +V +++ +L + E Q+ + + + + LH + +I
Sbjct: 87 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---GVI 138
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRDIK+ ++LL D ++DFGF + + V V GT ++APE
Sbjct: 139 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 197
Query: 227 DVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKEL--VDPKLRGDFD 282
D++S GI+++E++ G P + P + I + P + K L V P L+G D
Sbjct: 198 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-----RLKNLHKVSPSLKGFLD 251
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/202 (26%), Positives = 91/202 (45%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F +V R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 40 LGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 99
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 100 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 152
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 153 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAX 212
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 213 KSSDLWALGCIIYQLVAGLPPF 234
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 63.5 bits (153), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AVK + +NS + + EV ++ + H N++ L
Sbjct: 15 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 74
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG + E + K R ++ + Y H +
Sbjct: 75 IETEKTLYLVMEYASGGEVFDYLVAHG-WMKEKEARAKFRQIVS-----AVQYCHQKF-- 126
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G + G+ Y APE K
Sbjct: 127 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDTFCGSPPYAAPELFQGKKYD 183
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 184 GPEVDVWSLGVILYTLVSGSLPFD 207
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/239 (25%), Positives = 106/239 (44%), Gaps = 18/239 (7%)
Query: 48 KLGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
K+GEG G V S G +AVKK+ + EV ++ +H+N++ +
Sbjct: 31 KIGEGSTGIVCIATVRSSGKLVAVKKMDLRKQQRRELLFNEVVIMRDYQHENVVEMYNSY 90
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
D+ +V +++ +L + E Q+ + + + + LH + +I
Sbjct: 91 LVGDELWVVMEFLEGGALTDIVTHTRMNEEQI-----AAVCLAVLQALSVLHAQ---GVI 142
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRDIK+ ++LL D ++DFGF + + V V GT ++APE
Sbjct: 143 HRDIKSDSILLTHDGRVKLSDFGFCAQVSKEVPRRKXLV-GTPYWMAPELISRLPYGPEV 201
Query: 227 DVYSFGILLLEILTGRKP-IEKLPGGVKRTITEWAEPLIVKGKFKEL--VDPKLRGDFD 282
D++S GI+++E++ G P + P + I + P + K L V P L+G D
Sbjct: 202 DIWSLGIMVIEMVDGEPPYFNEPPLKAMKMIRDNLPP-----RLKNLHKVSPSLKGFLD 255
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 39 ATNGFSDDNK----LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEME---FAVEVEV 90
+T FSD K LG+G FG V + G + AVK + K + + EV++
Sbjct: 26 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 85
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L ++ H N++ L + +V + L + + ++D R ++ +
Sbjct: 86 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAARIIRQVLS- 143
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKG 207
GI Y+H I+HRD+K N+LL+S D + DFG + E M ++ G
Sbjct: 144 --GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-G 196
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
T Y+APE + G E CDV+S G++L +L+G P
Sbjct: 197 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 233
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 104/232 (44%), Gaps = 41/232 (17%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEV--LGRVRHKNLLGL---- 102
+G G +G+VY G + D +AVK N + F E + + + H N+
Sbjct: 21 IGRGRYGAVYKG-SLDERPVAVKVFSFANRQ---NFINEKNIYRVPLMEHDNIARFIVGD 76
Query: 103 -RGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
R G + L+V +Y PN SL +L + DW ++A G+ YLH E+
Sbjct: 77 ERVTADGRMEYLLVMEYYPNGSLXKYLSLHTS-----DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 162 ------TPHIIHRDIKASNVLLDSDFEPLVADFGFA------KLI-PEGVSHMTTRVKGT 208
P I HRD+ + NVL+ +D +++DFG + +L+ P + GT
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 209 LGYLAPEYAMWGKVS--------ESCDVYSFGILLLEIL---TGRKPIEKLP 249
+ Y+APE + G V+ + D+Y+ G++ EI T P E +P
Sbjct: 192 IRYMAPE-VLEGAVNLRDXESALKQVDMYALGLIYWEIFMRCTDLFPGESVP 242
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 108/238 (45%), Gaps = 41/238 (17%)
Query: 36 LHTATNGFSDDNKLGEGGFGSVYWG-RTSDGLQIAVKKLKAMNSKAEMEFAV----EVEV 90
++ ++ F + LGEG +G V G +A+KK++ + FA+ E+++
Sbjct: 6 VYNISSDFQLKSLLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPL---FALRTLREIKI 62
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L +H+N++ + QR ++ + ++ L +Q D R + + S
Sbjct: 63 LKHFKHENIITIFNI-----QRPDSFENFNEVYIIQEL-------MQTDLHRVISTQMLS 110
Query: 151 AEGILYLHHEVT--------PHIIHRDIKASNVLLDSDFEPLVADFGFAKLI-------- 194
+ I Y ++ ++IHRD+K SN+L++S+ + V DFG A++I
Sbjct: 111 DDHIQYFIYQTLRAVKVLHGSNVIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNS 170
Query: 195 -PEGVSHMTTRVKGTLGYLAPEYAMW-GKVSESCDVYSFGILLLEILTGRKPIEKLPG 250
P G T Y APE + K S + DV+S G +L E+ R+PI PG
Sbjct: 171 EPTGQQSGMVEFVATRWYRAPEVMLTSAKYSRAMDVWSCGCILAELFL-RRPI--FPG 225
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 63.2 bits (152), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AV+ + +NS + + EV ++ + H N++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS-----AVQYCHQKF-- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G + G+ Y APE K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDEFCGSPPYAAPELFQGKKYD 190
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V + + G A+K LK A+ E A E VL RH
Sbjct: 8 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 67
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + D R I SA + Y
Sbjct: 68 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA--LDY 123
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH E ++++RD+K N++LD D + DFG K EG+ T GT YLAP
Sbjct: 124 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP 178
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 209
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V + + G A+K LK A+ E A E VL RH
Sbjct: 10 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 69
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + D R I SA + Y
Sbjct: 70 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA--LDY 125
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH E ++++RD+K N++LD D + DFG K EG+ T GT YLAP
Sbjct: 126 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP 180
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 211
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + D G A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDGGLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 91/211 (43%), Gaps = 15/211 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFA---VEVEVLGRVRH 96
N F LG+G FG V + + G A+K LK A+ E A E VL RH
Sbjct: 9 NEFEYLKLLGKGTFGKVILVKEKATGRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRH 68
Query: 97 KNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
L L+ D+ V +Y L HL + D R I SA + Y
Sbjct: 69 PFLTALKYSFQTHDRLCFVMEYANGGELFFHLSRERV--FSEDRARFYGAEIVSA--LDY 124
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--RVKGTLGYLAP 214
LH E ++++RD+K N++LD D + DFG K EG+ T GT YLAP
Sbjct: 125 LHSE--KNVVYRDLKLENLMLDKDGHIKITDFGLCK---EGIKDGATMKXFCGTPEYLAP 179
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + D + G+++ E++ GR P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLPF 210
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 63.2 bits (152), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AVK + +NS + + EV ++ + H N++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS-----AVQYCHQKF-- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G + G Y APE K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFG--NKLDAFCGAPPYAAPELFQGKKYD 190
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 113/232 (48%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ KA ++ E++++ ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQGKAFKNR-------ELQIMRKLDHC 73
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P + + + Y+ Q +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVP--ATVYRVARHYSRAKQTLPVIYVKLYMYQL 131
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 188 ----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AVK + +N + + EV ++ + H N++ L
Sbjct: 23 IGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 83 IETEKTLYLVMEYASGGEVFDYLVAHGRMK-EKEARAKFRQIVS-----AVQYCHQK--- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+I+HRD+KA N+LLD D +ADFGF+ V + G+ Y APE K
Sbjct: 134 YIVHRDLKAENLLLDGDMNIKIADFGFSNEFT--VGNKLDTFCGSPPYAAPELFQGKKYD 191
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 107/254 (42%), Gaps = 33/254 (12%)
Query: 49 LGE-GGFGSVYWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLRGYC 106
+GE G FG VY + + +A K+ S+ E+E + VE+++L H N++ L
Sbjct: 17 IGELGDFGKVYKAQNKETSVLAAAKVIDTKSEEELEDYMVEIDILASCDHPNIVKL---- 72
Query: 107 AGTDQRLIVYDYMPNL-SLLSHLHGQYAGEVQLDWKRRMK------IAIGSAEGILYLHH 159
L + Y NL L+ G V L+ +R + + + + + YLH
Sbjct: 73 ------LDAFYYENNLWILIEFCAGGAVDAVMLELERPLTESQIQVVCKQTLDALNYLHD 126
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
IIHRD+KA N+L D + +ADFG + GT ++APE M
Sbjct: 127 N---KIIHRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMC 183
Query: 220 GKVSE-----SCDVYSFGILLLEILTGRKPIEKL-PGGVKRTITEWAEPLIVK-----GK 268
+ DV+S GI L+E+ P +L P V I + P + +
Sbjct: 184 ETSKDRPYDYKADVWSLGITLIEMAEIEPPHHELNPMRVLLKIAKSEPPTLAQPSRWSSN 243
Query: 269 FKELVDPKLRGDFD 282
FK+ + L + D
Sbjct: 244 FKDFLKKCLEKNVD 257
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 94/204 (46%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AV+ + +NS + + EV ++ + H N++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFREVRIMKVLNHPNIVKLFEV 81
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 82 IETEKTLYLVMEYASGGEVFDYLVAHGR-MKEKEARAKFRQIVS-----AVQYCHQKF-- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G T G+ Y APE K
Sbjct: 134 -IVHRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDT--FCGSPPYAAPELFQGKKYD 190
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 62.8 bits (151), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 68 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 127
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 128 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 183
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 184 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 238
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPI 245
S D++S G+ L+E+ GR PI
Sbjct: 239 GTHYSVQSDIWSMGLSLVEMAVGRYPI 265
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 101/202 (50%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T GL++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG- 220
+ IIHRD+K SN+ ++ D E + DFG A+ + MT V T Y APE +
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFGLARHTDD---EMTGYV-ATRWYRAPEIMLNAM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 103/208 (49%), Gaps = 20/208 (9%)
Query: 47 NKLGEGGFGSVYWGRTS-DGLQIAVK-----KLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
+ LG G FG V G G ++AVK K+++++ +++ E++ L RH +++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHII 74
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L + +V +Y+ L ++ G V+ RR+ I SA + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSA--VDYCHRH 130
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
+ ++HRD+K NVLLD+ +ADFG + ++ +G T+ G+ Y APE + G
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTS--CGSPNYAAPE-VISG 184
Query: 221 KV--SESCDVYSFGILLLEILTGRKPIE 246
++ D++S G++L +L G P +
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 104/218 (47%), Gaps = 21/218 (9%)
Query: 39 ATNGFSDDNK----LGEGGFGSVYWGRTS-DGLQIAVKKL--KAMNSKAEMEFAV-EVEV 90
+T FSD K LG+G FG V + G + AVK + + + K + E + EV++
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L ++ H N++ L + +V + L + + ++D R ++ +
Sbjct: 80 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAARIIRQVLS- 137
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKG 207
GI Y+H I+HRD+K N+LL+S D + DFG + E M ++ G
Sbjct: 138 --GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-G 190
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
T Y+APE + G E CDV+S G++L +L+G P
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 62.4 bits (150), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 33 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 92
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 93 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 148
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 149 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 203
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPI 245
S D++S G+ L+E+ GR PI
Sbjct: 204 GTHYSVQSDIWSMGLSLVEMAVGRYPI 230
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 62.4 bits (150), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 90/202 (44%), Gaps = 12/202 (5%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
LGEG F + R TS I + + + + + ++ + E +V+ R+ H + L
Sbjct: 38 LGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVTRERDVMSRLDHPFFVKLYF 97
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ Y N LL ++ + G R I SA + YLH +
Sbjct: 98 TFQDDEKLYFGLSYAKNGELLKYI--RKIGSFDETCTRFYTAEIVSA--LEYLHGK---G 150
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLI-PEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
IIHRD+K N+LL+ D + DFG AK++ PE GT Y++PE
Sbjct: 151 IIHRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLTEKSAC 210
Query: 224 ESCDVYSFGILLLEILTGRKPI 245
+S D+++ G ++ +++ G P
Sbjct: 211 KSSDLWALGCIIYQLVAGLPPF 232
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/276 (24%), Positives = 122/276 (44%), Gaps = 22/276 (7%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 176
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVD---P 275
S D++S G+ L+E+ GR PI P K + P+ + +V+ P
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPIP--PPDAKE---DSRPPMAIFELLDYIVNEPPP 231
Query: 276 KLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
KL + + +N C+ P +R ++K+++
Sbjct: 232 KLPSGVFSLEFQDFVNK---CLIKNPAERADLKQLM 264
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 49 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 101
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 102 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 159
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 160 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 215
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 216 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 261
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 39 ATNGFSDDNK----LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEME---FAVEVEV 90
+T FSD K LG+G FG V + G + AVK + K + + EV++
Sbjct: 43 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 102
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L ++ H N++ L + +V + L + + ++D R ++ +
Sbjct: 103 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAARIIRQVLS- 160
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKG 207
GI Y+H I+HRD+K N+LL+S D + DFG + E M ++ G
Sbjct: 161 --GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-G 213
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
T Y+APE + G E CDV+S G++L +L+G P
Sbjct: 214 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 250
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 39 ATNGFSDDNK----LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEME---FAVEVEV 90
+T FSD K LG+G FG V + G + AVK + K + + EV++
Sbjct: 44 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 103
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L ++ H N++ L + +V + L + + ++D R ++ +
Sbjct: 104 LKQLDHPNIMKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAARIIRQVLS- 161
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKG 207
GI Y+H I+HRD+K N+LL+S D + DFG + E M ++ G
Sbjct: 162 --GITYMHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKMKDKI-G 214
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
T Y+APE + G E CDV+S G++L +L+G P
Sbjct: 215 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 251
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 96/199 (48%), Gaps = 12/199 (6%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG-YC 106
KLGEG +GSVY + QI K + S + E E+ ++ + +++ G Y
Sbjct: 36 KLGEGSYGSVYKAIHKETGQIVAIKQVPVESDLQ-EIIKEISIMQQCDSPHVVKYYGSYF 94
Query: 107 AGTDQRLIV-YDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
TD +++ Y ++S + L + E ++ I + +G+ YLH
Sbjct: 95 KNTDLWIVMEYCGAGSVSDIIRLRNKTLTEDEI-----ATILQSTLKGLEYLHFM---RK 146
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
IHRDIKA N+LL+++ +ADFG A + + ++ V GT ++APE +
Sbjct: 147 IHRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNX-VIGTPFWMAPEVIQEIGYNCV 205
Query: 226 CDVYSFGILLLEILTGRKP 244
D++S GI +E+ G+ P
Sbjct: 206 ADIWSLGITAIEMAEGKPP 224
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + L +A+K K S + E F E + + H +++ L
Sbjct: 15 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 74
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 75 GVITENPVWIIM-----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---S 126
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 127 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 186
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 187 TSASDVWMFGVCMWEILMHGVKPFQ 211
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 87 EVEVLGRVR-HKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMK 145
EV++L +V H N++ L+ +V+D M L +L +V L K K
Sbjct: 60 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRK 115
Query: 146 IAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV 205
I E I LH +I+HRD+K N+LLD D + DFGF+ + G V
Sbjct: 116 IMRALLEVICALHK---LNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREV 170
Query: 206 KGTLGYLAPE---------YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
GT YLAPE + +GK D++S G+++ +L G P
Sbjct: 171 CGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPF 216
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 62.0 bits (149), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 107
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 165
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 166 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 221
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 222 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 267
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 87 EVEVLGRVR-HKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMK 145
EV++L +V H N++ L+ +V+D M L +L +V L K K
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRK 128
Query: 146 IAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV 205
I E I LH +I+HRD+K N+LLD D + DFGF+ + G V
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLREV 183
Query: 206 KGTLGYLAPE---------YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
GT YLAPE + +GK D++S G+++ +L G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPF 229
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + L +A+K K S + E F E + + H +++ L
Sbjct: 20 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 79
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 80 GVITENPVWIIM-----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---S 131
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 132 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 191
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 192 TSASDVWMFGVCMWEILMHGVKPFQ 216
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 57 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 109
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 167
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 168 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 223
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 224 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 269
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 62.0 bits (149), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 92/204 (45%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++AVK + +NS + + EV + + H N++ L
Sbjct: 22 IGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFREVRIXKVLNHPNIVKLFEV 81
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 82 IETEKTLYLVXEYASGGEVFDYLVAHGR-XKEKEARAKFRQIVS-----AVQYCHQKF-- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G + G Y APE K
Sbjct: 134 -IVHRDLKAENLLLDADXNIKIADFGFSNEFTFG--NKLDAFCGAPPYAAPELFQGKKYD 190
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 191 GPEVDVWSLGVILYTLVSGSLPFD 214
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 26 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 78
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 79 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 136
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 137 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 192
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 193 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 238
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + L +A+K K S + E F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 78 GVITENPVWIIM-----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-- 130
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/225 (26%), Positives = 99/225 (44%), Gaps = 32/225 (14%)
Query: 29 RIFTYKELHTATNGFSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKL--KAMNSKAEMEFA 85
+IF +KE LG G F V + G AVK + KA+ K E
Sbjct: 22 KIFEFKET------------LGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGK-ESSIE 68
Query: 86 VEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRR 143
E+ VL +++H+N++ L + +V + L + G Y + R+
Sbjct: 69 NEIAVLRKIKHENIVALEDIYESPNHLYLVMQLVSGGELFDRIVEKGFYTEKDASTLIRQ 128
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLL---DSDFEPLVADFGFAKLIPEGVSH 200
+ + + YLH I+HRD+K N+L D + + +++DFG +K+ EG
Sbjct: 129 V------LDAVYYLHR---MGIVHRDLKPENLLYYSQDEESKIMISDFGLSKM--EGKGD 177
Query: 201 MTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + GT GY+APE S++ D +S G++ +L G P
Sbjct: 178 VMSTACGTPGYVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPF 222
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + L +A+K K S + E F E + + H +++ L
Sbjct: 46 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 105
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 106 GVITENPVWIIM-----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-- 158
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 159 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 217
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 218 TSASDVWMFGVCMWEILMHGVKPFQ 242
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + L +A+K K S + E F E + + H +++ L
Sbjct: 21 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 80
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 81 GVITENPVWIIM-----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLE---S 132
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 133 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 192
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 193 TSASDVWMFGVCMWEILMHGVKPFQ 217
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 59 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 111
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 112 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 169
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 170 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 225
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 226 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 271
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 61.6 bits (148), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 122 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 176
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPI 245
S D++S G+ L+E+ GR PI
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 77/169 (45%), Gaps = 22/169 (13%)
Query: 87 EVEVLGRVR-HKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMK 145
EV++L +V H N++ L+ +V+D M L +L +V L K K
Sbjct: 73 EVDILRKVSGHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL----TEKVTLSEKETRK 128
Query: 146 IAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV 205
I E I LH +I+HRD+K N+LLD D + DFGF+ + G V
Sbjct: 129 IMRALLEVICALH---KLNIVHRDLKPENILLDDDMNIKLTDFGFSCQLDPG--EKLRSV 183
Query: 206 KGTLGYLAPE---------YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
GT YLAPE + +GK D++S G+++ +L G P
Sbjct: 184 CGTPSYLAPEIIECSMNDNHPGYGK---EVDMWSTGVIMYTLLAGSPPF 229
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 49 LGEGGFGSVYWGRTSDG--------LQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
LG+GG+G V+ R G +++ K + N+K E +L V+H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLH--GQYAGEVQLDWKRRMKIAIGSAEGILYL 157
L Y T +L ++ +Y+ L L G + + + + +A+G +L
Sbjct: 85 DLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HL 137
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK-LIPEGVSHMTTRVKGTLGYLAPEY 216
H + II+RD+K N++L+ + DFG K I +G +T GT+ Y+APE
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHTFCGTIEYMAPEI 192
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
M + + D +S G L+ ++LTG P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 97/209 (46%), Gaps = 24/209 (11%)
Query: 49 LGEGGFGSVYWGRTSDG--------LQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
LG+GG+G V+ R G +++ K + N+K E +L V+H ++
Sbjct: 25 LGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNILEEVKHPFIV 84
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLH--GQYAGEVQLDWKRRMKIAIGSAEGILYL 157
L Y T +L ++ +Y+ L L G + + + + +A+G +L
Sbjct: 85 DLI-YAFQTGGKLYLILEYLSGGELFMQLEREGIFMEDTACFYLAEISMALG------HL 137
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAK-LIPEGVSHMTTRVKGTLGYLAPEY 216
H + II+RD+K N++L+ + DFG K I +G +T GT+ Y+APE
Sbjct: 138 HQK---GIIYRDLKPENIMLNHQGHVKLTDFGLCKESIHDGT--VTHXFCGTIEYMAPEI 192
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
M + + D +S G L+ ++LTG P
Sbjct: 193 LMRSGHNRAVDWWSLGALMYDMLTGAPPF 221
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 34 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 86
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 87 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 144
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 145 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 200
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE + S DV+S G +L E+L G +PI GV + +
Sbjct: 201 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 246
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 122 EKHK--IMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 176
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPI 245
S D++S G+ L+E+ GR PI
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 100 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 152
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 210
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 211 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 266
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 267 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 312
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 92/212 (43%), Gaps = 21/212 (9%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V + I +KL + K + + E++VL
Sbjct: 16 DDFERISELGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 75
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRM-----KIAIGSAEG 153
++G G + I + H+ G +V + KR K++I G
Sbjct: 76 IVGFYGAFYSDGEISIC---------MEHMDGGSLDQVLKEAKRIPEEILGKVSIAVLRG 126
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
+ YL + I+HRD+K SN+L++S E + DFG + + + M GT Y+A
Sbjct: 127 LAYLREK--HQIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMA 181
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
PE S D++S G+ L+E+ GR PI
Sbjct: 182 PERLQGTHYSVQSDIWSMGLSLVELAVGRYPI 213
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 61.6 bits (148), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + L +A+K K S + E F E + + H +++ L
Sbjct: 23 IGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 82
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 83 GVITENPVWIIM-----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-- 135
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 136 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 194
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 195 TSASDVWMFGVCMWEILMHGVKPFQ 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + + +A+K K S + E F E + + H +++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 458 GVITENPVWIIM-----ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---S 509
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 510 KRFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 66/273 (24%), Positives = 121/273 (44%), Gaps = 22/273 (8%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 25 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 84
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 85 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 140
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 141 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 195
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLR 278
S D++S G+ L+E+ GR PI G + I E + ++ + PKL
Sbjct: 196 GTHYSVQSDIWSMGLSLVEMAVGRYPIGSGSGSM--AIFELLDYIVNEPP------PKLP 247
Query: 279 GDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
+ + +N C+ P +R ++K+++
Sbjct: 248 SGVFSLEFQDFVNK---CLIKNPAERADLKQLM 277
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 56/208 (26%), Positives = 101/208 (48%), Gaps = 20/208 (9%)
Query: 47 NKLGEGGFGSVYWGRTS-DGLQIAVK-----KLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
+ LG G FG V G G ++AVK K+++++ +++ E++ L RH +++
Sbjct: 17 DTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIK--REIQNLKLFRHPHII 74
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L + +V +Y+ L ++ G V+ RR+ I SA + Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKH--GRVEEMEARRLFQQILSA--VDYCHRH 130
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
+ ++HRD+K NVLLD+ +ADFG + ++ +G G+ Y APE + G
Sbjct: 131 M---VVHRDLKPENVLLDAHMNAKIADFGLSNMMSDG--EFLRDSCGSPNYAAPE-VISG 184
Query: 221 KV--SESCDVYSFGILLLEILTGRKPIE 246
++ D++S G++L +L G P +
Sbjct: 185 RLYAGPEVDIWSCGVILYALLCGTLPFD 212
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 112/232 (48%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 73
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 131
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS++ +R
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRY- 187
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 188 ----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/202 (29%), Positives = 100/202 (49%), Gaps = 19/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV T G ++AVKKL + S + E+ +L ++H+N++GL
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRELRLLKHMKHENVIGLLD- 88
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV----QLDWKRRMKIAIGSAEGILYLHHEV 161
T R + + ++ L++HL G + +L + G+ Y+H
Sbjct: 89 -VFTPARSL--EEFNDVYLVTHLMGADLNNIVKCQKLTDDHVQFLIYQILRGLKYIH--- 142
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ IIHRD+K SN+ ++ D E + DF A+ + MT V T Y APE + W
Sbjct: 143 SADIIHRDLKPSNLAVNEDCELKILDFYLARHTDD---EMTGYV-ATRWYRAPEIMLNWM 198
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTGR
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 94/211 (44%), Gaps = 28/211 (13%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEM-------EFAVEVEVLGRVRHKNLLG 101
+G G FG V R ++ KL SK EM F E +++ ++
Sbjct: 83 IGRGAFGEVQLVRHKASQKVYAMKLL---SKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 102 LRGYCAGTDQRLI--VYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
L +CA D + + V +YMP L+ +L Y +V W + +AE +L L
Sbjct: 140 L--FCAFQDDKYLYMVMEYMPGGDLV-NLMSNY--DVPEKWAK-----FYTAEVVLALDA 189
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ +IHRD+K N+LLD +ADFG K+ G+ H T V GT Y++PE
Sbjct: 190 IHSMGLIHRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAV-GTPDYISPEVLK 248
Query: 219 W----GKVSESCDVYSFGILLLEILTGRKPI 245
G CD +S G+ L E+L G P
Sbjct: 249 SQGGDGYYGRECDWWSVGVFLFEMLVGDTPF 279
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 61.2 bits (147), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV G ++A+KKL + S+ + A E+ +L ++H+N++GL
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 109
Query: 106 CAGTDQRLIVYDY---MPNLSL-LSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
YD+ MP + L + G E ++ + + +G+ Y+H
Sbjct: 110 FTPASSLRNFYDFYLVMPFMQTDLQKIMGMEFSEEKIQY-----LVYQMLKGLKYIH--- 161
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ ++HRD+K N+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 162 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWYRAPEVILSWM 217
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTG+
Sbjct: 218 HYNQTVDIWSVGCIMAEMLTGK 239
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRG 104
K+G+G FG V+ R G ++A+KK+ N K E+++L ++H+N++ L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 105 YC---AGTDQRL-----IVYDYMPN--LSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
C A R +V+D+ + LLS++ ++ + KR M++ + G+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS---EIKRVMQMLLN---GL 138
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG---TLGY 211
Y+H I+HRD+KA+NVL+ D +ADFG A+ + R TL Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 212 LAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPI 245
PE + + D++ G ++ E+ T R PI
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 67/225 (29%), Positives = 103/225 (45%), Gaps = 39/225 (17%)
Query: 49 LGEGGFGSVYWGRTSDGLQ-IAVKKL-KAMNSKAEMEFAVEVEV--LGRVRHKNLLGLRG 104
LGEG FG V Q +A+K + + + K++M VE E+ L +RH +++ L
Sbjct: 17 LGEGSFGKVKLATHYKTQQKVALKFISRQLLKKSDMHMRVEREISYLKLLRHPHIIKLYD 76
Query: 105 YCAG-TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDW---KRRMKIAIGS------AEGI 154
TD +++ +YAG D+ K+RM G I
Sbjct: 77 VITTPTDIVMVI---------------EYAGGELFDYIVEKKRMTEDEGRRFFQQIICAI 121
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
Y H I+HRD+K N+LLD + +ADFG + ++ +G T+ G+ Y AP
Sbjct: 122 EYCHRH---KIVHRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTS--CGSPNYAAP 176
Query: 215 EYAMWGKV--SESCDVYSFGILLLEILTGRKPI--EKLPGGVKRT 255
E + GK+ DV+S GI+L +L GR P E +P K+
Sbjct: 177 E-VINGKLYAGPEVDVWSCGIVLYVMLVGRLPFDDEFIPNLFKKV 220
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 98/227 (43%), Gaps = 25/227 (11%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG G F V+ + G A+K +K + + E+ VL +++H+N++ L
Sbjct: 17 LGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDIYE 76
Query: 108 GTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSA-EGILYLHHEVTPH 164
T +V + L + G Y ++ + I + YLH
Sbjct: 77 STTHYYLVMQLVSGGELFDRILERGVYT-------EKDASLVIQQVLSAVKYLHEN---G 126
Query: 165 IIHRDIKASNVLL---DSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGK 221
I+HRD+K N+L + + + ++ DFG +K+ G+ M+T GT GY+APE
Sbjct: 127 IVHRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGI--MSTAC-GTPGYVAPEVLAQKP 183
Query: 222 VSESCDVYSFGILLLEILTGRKPI-----EKLPGGVKRTITEWAEPL 263
S++ D +S G++ +L G P KL +K E+ P
Sbjct: 184 YSKAVDCWSIGVITYILLCGYPPFYEETESKLFEKIKEGYYEFESPF 230
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 122 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 176
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPI 245
S D++S G+ L+E+ GR PI
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 95/207 (45%), Gaps = 11/207 (5%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 6 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 65
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 66 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 121
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 122 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDSMANSFVGTRSYMSPERLQ 176
Query: 219 WGKVSESCDVYSFGILLLEILTGRKPI 245
S D++S G+ L+E+ GR PI
Sbjct: 177 GTHYSVQSDIWSMGLSLVEMAVGRYPI 203
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 61.2 bits (147), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 92/210 (43%), Gaps = 23/210 (10%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLK---AMNSKAEME-FAVEVEVLGRVRHKNLLGLRG 104
+G G FG V + + ++ K+ M +AE F E +VL K + L
Sbjct: 82 IGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTLHY 141
Query: 105 YCAGTDQRLIVYDYMPN---LSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
+ +V DY L+LLS + E+ + M IAI S +
Sbjct: 142 AFQDDNNLYLVMDYYVGGDLLTLLSKFEDRLPEEMARFYLAEMVIAIDSVHQL------- 194
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEY--AM 218
H +HRDIK N+L+D + +ADFG KL+ +G + V GT Y++PE AM
Sbjct: 195 --HYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAV-GTPDYISPEILQAM 251
Query: 219 W---GKVSESCDVYSFGILLLEILTGRKPI 245
G+ CD +S G+ + E+L G P
Sbjct: 252 EGGKGRYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 92/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + + +A+K K S + E F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 78 GVITENPVWIIM-----ELCTLGELRSFLQVRKYSLDLASLILYAYQLSTALAYLESK-- 130
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + + ++ K + ++APE + +
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/232 (25%), Positives = 103/232 (44%), Gaps = 26/232 (11%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAE----MEFAV 86
KE+ + F ++ LGE FG VY G + G Q +K + KAE EF
Sbjct: 21 KEISLSAVRFMEE--LGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRH 78
Query: 87 EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRM 144
E + R++H N++ L G +++ Y + L L ++ D R +
Sbjct: 79 EAMLRARLQHPNVVCLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTV 138
Query: 145 KIAIGS----------AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFG-FAKL 193
K A+ A G+ YL + H++H+D+ NVL+ ++D G F ++
Sbjct: 139 KSALEPPDFVHLVAQIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREV 195
Query: 194 IPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ + ++APE M+GK S D++S+G++L E+ + G +P
Sbjct: 196 YAADYYKLLGNSLLPIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 247
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/231 (29%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 73
Query: 98 NLLGLR--GYCAGTDQRLI----VYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR Y +G + ++ V DY+P H Y+ Q +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDVVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 131
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 132 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE + S DV+S G +L E+L G +PI GV + +
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG------L 102
+G G +G VY GR Q+A K+ + E E E+ +L + H + +
Sbjct: 32 VGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNIATYYGAFI 91
Query: 103 RGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
+ G D +L +V ++ S+ + ++ +W IA E + L H
Sbjct: 92 KKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKGNTLKEEW-----IAYICREILRGLSHLH 146
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGK 221
+IHRDIK NVLL + E + DFG + + V T + GT ++APE +
Sbjct: 147 QHKVIHRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFI-GTPYWMAPEVIACDE 205
Query: 222 VSES-----CDVYSFGILLLEILTGRKPI 245
++ D++S GI +E+ G P+
Sbjct: 206 NPDATYDFKSDLWSLGITAIEMAEGAPPL 234
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 91 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 146 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 31 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 90
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 91 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 145
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 146 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 202
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 203 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 237
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 20/202 (9%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G +GSV G ++A+KKL + S+ + A E+ +L ++H+N++GL
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELLLLKHMQHENVIGLLDV 91
Query: 106 CAGTDQRLIVYDY---MPNLSL-LSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
YD+ MP + L + G E ++ + + +G+ Y+H
Sbjct: 92 FTPASSLRNFYDFYLVMPFMQTDLQKIMGLKFSEEKIQY-----LVYQMLKGLKYIH--- 143
Query: 162 TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WG 220
+ ++HRD+K N+ ++ D E + DFG A+ + MT V T Y APE + W
Sbjct: 144 SAGVVHRDLKPGNLAVNEDCELKILDFGLAR---HADAEMTGYV-VTRWYRAPEVILSWM 199
Query: 221 KVSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+LTG+
Sbjct: 200 HYNQTVDIWSVGCIMAEMLTGK 221
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 55 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 107
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 108 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 165
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 166 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 221
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 222 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 267
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 60.8 bits (146), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + + +A+K K S + E F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 78 GVITENPVWIIM-----ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ S+ + DFG ++ + + ++ K + ++APE + +
Sbjct: 131 -RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRRF 189
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 24/218 (11%)
Query: 48 KLGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAE----MEFAVEVEVLGRVRHKNLL 100
+LGE FG VY G + G Q +K + KAE EF E + R++H N++
Sbjct: 16 ELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNVV 75
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGS-------- 150
L G +++ Y + L L ++ D R +K A+
Sbjct: 76 CLLGVVTKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHLVA 135
Query: 151 --AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFG-FAKLIPEGVSHMTTRVKG 207
A G+ YL + H++H+D+ NVL+ ++D G F ++ +
Sbjct: 136 QIAAGMEYLS---SHHVVHKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSLL 192
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ ++APE M+GK S D++S+G++L E+ + G +P
Sbjct: 193 PIRWMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQP 230
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 29 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 88
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 89 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 143
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 144 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 200
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 201 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 235
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 374 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 433
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 434 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 488
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 489 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 545
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 546 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 579
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 98/214 (45%), Gaps = 16/214 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 373 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 432
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 433 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 487
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 488 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 544
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPG 250
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 545 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKG 578
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 60.5 bits (145), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 94/206 (45%), Gaps = 11/206 (5%)
Query: 41 NGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKN 98
+ F ++LG G G V+ + +KL + K + + E++VL
Sbjct: 9 DDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPY 68
Query: 99 LLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
++G G + I ++M SL L + AG + ++ IA+ +G+ YL
Sbjct: 69 IVGFYGAFYSDGEISICMEHMDGGSLDQVL--KKAGRIPEQILGKVSIAV--IKGLTYLR 124
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM 218
+ I+HRD+K SN+L++S E + DFG + + + M GT Y++PE
Sbjct: 125 EK--HKIMHRDVKPSNILVNSRGEIKLCDFGVSGQL---IDEMANEFVGTRSYMSPERLQ 179
Query: 219 WGKVSESCDVYSFGILLLEILTGRKP 244
S D++S G+ L+E+ GR P
Sbjct: 180 GTHYSVQSDIWSMGLSLVEMAVGRYP 205
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 85
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 143
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 144 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 200 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 245
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 40 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 92
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 93 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 150
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 151 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 206
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 207 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 252
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 29 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 81
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 82 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 139
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 140 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 195
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 196 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 241
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 95/215 (44%), Gaps = 27/215 (12%)
Query: 48 KLGEGGFGSVYWGRTSDG-LQIAVKKLKAMN-------------SKAEMEFAVEVEVLGR 93
KLG G +G V + +G + A+K +K K E E+ +L
Sbjct: 43 KLGSGAYGEVLLCKEKNGHSEKAIKVIKKSQFDKGRYSDDNKNIEKFHEEIYNEISLLKS 102
Query: 94 VRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEG 153
+ H N++ L +V ++ L + ++ + + D MK + G
Sbjct: 103 LDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQIINRHKFD-ECDAANIMKQILS---G 158
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
I YLH +I+HRDIK N+LL++ L + DFG + + + R+ GT
Sbjct: 159 ICYLHKH---NIVHRDIKPENILLENKNSLLNIKIVDFGLSSFFSKDYK-LRDRL-GTAY 213
Query: 211 YLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
Y+APE + K +E CDV+S G+++ +L G P
Sbjct: 214 YIAPE-VLKKKYNEKCDVWSCGVIMYILLCGYPPF 247
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 76/278 (27%), Positives = 119/278 (42%), Gaps = 43/278 (15%)
Query: 50 GEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGL-----RG 104
G FG V+ + + +AVK + + K + E+ ++H+NLL RG
Sbjct: 24 ARGRFGCVWKAQLMNDF-VAVK-IFPLQDKQSWQSEREIFSTPGMKHENLLQFIAAEKRG 81
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV--- 161
+ LI + SL +L G + W +A + G+ YLH +V
Sbjct: 82 SNLEVELWLITA-FHDKGSLTDYLKGNI-----ITWNELCHVAETMSRGLSYLHEDVPWC 135
Query: 162 -----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI----PEGVSHMTTRVKGTLGYL 212
P I HRD K+ NVLL SD ++ADFG A P G +H GT Y+
Sbjct: 136 RGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQV---GTRRYM 192
Query: 213 APEYAMWGKVSES------CDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVK 266
APE + G ++ D+Y+ G++L E+++ K + G V + + E +
Sbjct: 193 APE-VLEGAINFQRDAFLRIDMYAMGLVLWELVSRCKAAD---GPVDEYMLPFEEEIGQH 248
Query: 267 GKFKEL----VDPKLRGDFDENQLKQAINVAVLCVQSE 300
+EL V K+R ++ LK +A LCV E
Sbjct: 249 PSLEELQEVVVHKKMRPTIKDHWLKHP-GLAQLCVTIE 285
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 75 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 129
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 130 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 186
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRG 104
K+G+G FG V+ R G ++A+KK+ N K E+++L ++H+N++ L
Sbjct: 24 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 83
Query: 105 YC---AGTDQRL-----IVYDYMPN--LSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
C A R +V+D+ + LLS++ ++ + KR M++ + G+
Sbjct: 84 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS---EIKRVMQMLLN---GL 137
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG---TLGY 211
Y+H I+HRD+KA+NVL+ D +ADFG A+ + R TL Y
Sbjct: 138 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 212 LAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPI 245
PE + + D++ G ++ E+ T R PI
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 228
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRG 104
K+G+G FG V+ R G ++A+KK+ N K E+++L ++H+N++ L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 105 YC---AGTDQRL-----IVYDYMPN--LSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
C A R +V+D+ + LLS++ ++ + KR M++ + G+
Sbjct: 85 ICRTKASPYNRCKASIYLVFDFCEHDLAGLLSNVLVKFTLS---EIKRVMQMLLN---GL 138
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG---TLGY 211
Y+H I+HRD+KA+NVL+ D +ADFG A+ + R TL Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 212 LAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPI 245
PE + + D++ G ++ E+ T R PI
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 103/215 (47%), Gaps = 27/215 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRG 104
K+G+G FG V+ R G ++A+KK+ N K E+++L ++H+N++ L
Sbjct: 25 KIGQGTFGEVFKARHRKTGQKVALKKVLMENEKEGFPITALREIKILQLLKHENVVNLIE 84
Query: 105 YC---AGTDQRL-----IVYDYMPN--LSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
C A R +V+D+ + LLS++ ++ + KR M++ + G+
Sbjct: 85 ICRTKASPYNRCKGSIYLVFDFCEHDLAGLLSNVLVKFTLS---EIKRVMQMLLN---GL 138
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKG---TLGY 211
Y+H I+HRD+KA+NVL+ D +ADFG A+ + R TL Y
Sbjct: 139 YYIHRN---KILHRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 212 LAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPI 245
PE + + D++ G ++ E+ T R PI
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT-RSPI 229
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 15 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 74
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 75 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 129
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 130 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYAPECI 186
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 187 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 221
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 21 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 80
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 81 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 135
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 136 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 192
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 193 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 227
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 60.5 bits (145), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKMLNHENVVKFYGH 73
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 126
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 186
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 9 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 68
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 69 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 123
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 124 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 180
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 181 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 215
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 110/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 33 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 85
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 143
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 144 FRSLAYIHSF---GICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 199
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 200 ----YRAPEL-IFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 245
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 69/146 (47%), Gaps = 10/146 (6%)
Query: 165 IIHRDIKASNVLL---DSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGK 221
++HRD+K N+L + + E + DFGFA+L P + T TL Y APE
Sbjct: 127 VVHRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPC-FTLHYAAPELLNQNG 185
Query: 222 VSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDF 281
ESCD++S G++L +L+G+ P + + T I KG F G+
Sbjct: 186 YDESCDLWSLGVILYTMLSGQVPFQSHDRSLTCTSAVEIMKKIKKGDF------SFEGEA 239
Query: 282 DENQLKQAINVAVLCVQSEPEKRPNM 307
+N ++A ++ + +P KR M
Sbjct: 240 WKNVSQEAKDLIQGLLTVDPNKRLKM 265
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 54/204 (26%), Positives = 93/204 (45%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++A+K + +N + + EV ++ + H N++ L
Sbjct: 20 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 79
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 80 IETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFRQIVS-----AVQYCHQK--- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ G T G+ Y APE K
Sbjct: 131 RIVHRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDT--FCGSPPYAAPELFQGKKYD 188
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 189 GPEVDVWSLGVILYTLVSGSLPFD 212
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G+++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 73
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 131
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE + S DV+S G +L E+L G +PI GV + +
Sbjct: 188 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 21 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 73
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 131
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 132 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 187
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 188 ----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 233
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 126/297 (42%), Gaps = 52/297 (17%)
Query: 49 LGEGGFGSVYWGRTSDGLQ-------IAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLL 100
LGEG FG V T+ L+ +AVK LK S +E+ + E VL +V H +++
Sbjct: 31 LGEGEFGKVV-KATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ--------------------YAGEVQLDW 140
L G C+ L++ +Y SL L + E L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 141 KRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH 200
+ A ++G+ YL ++HRD+ A N+L+ + ++DFG ++ + E S+
Sbjct: 150 GDLISFAWQISQGMQYL---AEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 201 MTTRVKGTL--GYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTIT 257
+ R +G + ++A E + DV+SFG+LL EI+T G P +P
Sbjct: 207 V-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------- 257
Query: 258 EWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ L+ R + +N ++ + + C + EP+KRP ++ L
Sbjct: 258 --------PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 86/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G+++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGVIMGEMIKG 221
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/215 (24%), Positives = 98/215 (45%), Gaps = 16/215 (7%)
Query: 45 DDNKLGEGGFGSVYWG-----RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNL 99
+D +LG G FG+V G + + + + K +A + + E E V+ ++ + +
Sbjct: 11 EDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLDNPYI 70
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
+ + G C L++ ++ L L+ + K +++ + G+ YL
Sbjct: 71 VRMIGICEAESWMLVM-----EMAELGPLNKYLQQNRHVKDKNIIELVHQVSMGMKYLEE 125
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI--PEGVSHMTTRVKGTLGYLAPEYA 217
+ +HRD+ A NVLL + ++DFG +K + E T K + + APE
Sbjct: 126 S---NFVHRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYAPECI 182
Query: 218 MWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGG 251
+ K S DV+SFG+L+ E + G+KP + G
Sbjct: 183 NYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGS 217
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 23/230 (10%)
Query: 29 RIFTYKELHTATNG---FSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFA 85
R +K L G F D LG GGFG V+ + A KL A +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLK 224
Query: 86 ---------VEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGE 135
VE ++L +V + ++ L Y T L +V M + H++
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 136 VQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
R + G+ +LH +II+RD+K NVLLD D ++D G A +
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 196 EGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
G + T GT G++APE + + S D ++ G+ L E++ R P
Sbjct: 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/232 (28%), Positives = 111/232 (47%), Gaps = 36/232 (15%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 22 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 74
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 75 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 132
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 133 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 188
Query: 207 GTLGYLAPEYAMWGKV--SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE ++G + S DV+S G +L E+L G +PI GV + +
Sbjct: 189 ----YRAPE-LIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 234
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/231 (28%), Positives = 108/231 (46%), Gaps = 34/231 (14%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSD-GLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHK 97
++D +G G FG VY + D G +A+KK+ K ++ E++++ ++ H
Sbjct: 25 SYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKVLQDKRFKNR-------ELQIMRKLDHC 77
Query: 98 NLLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
N++ LR + + ++ +V DY+P H Y+ Q +K+ +
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARH--YSRAKQTLPVIYVKLYMYQL 135
Query: 152 -EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVK 206
+ Y+H + I HRDIK N+LLD D L + DFG AK + G VS + +R
Sbjct: 136 FRSLAYIH---SFGICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRY- 191
Query: 207 GTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTI 256
Y APE + S DV+S G +L E+L G +PI GV + +
Sbjct: 192 ----YRAPELIFGATDYTSSIDVWSAGCVLAELLLG-QPIFPGDSGVDQLV 237
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/228 (24%), Positives = 96/228 (42%), Gaps = 38/228 (16%)
Query: 49 LGEGGFGSVYWGRTSDGL------QIAVKKLKA-MNSKAEMEFAVEVEVLGRVRHKNLLG 101
+GEG FG V+ R L +AVK LK ++ + +F E ++ + N++
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 102 LRGYCAGTDQRLIVYDYMP--------------NLSLLSH------LHGQYAGEVQLDWK 141
L G CA ++++YM + LSH G L
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 142 RRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHM 201
++ IA A G+ YL +HRD+ N L+ + +ADFG ++ I S
Sbjct: 175 EQLCIARQVAAGMAYLSER---KFVHRDLATRNCLVGENMVVKIADFGLSRNI---YSAD 228
Query: 202 TTRVKGT----LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ G + ++ PE + + + DV+++G++L EI + G +P
Sbjct: 229 YYKADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQP 276
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 23/230 (10%)
Query: 29 RIFTYKELHTATNG---FSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFA 85
R +K L G F D LG GGFG V+ + A KL A +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLK 224
Query: 86 ---------VEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGE 135
VE ++L +V + ++ L Y T L +V M + H++
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 136 VQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
R + G+ +LH +II+RD+K NVLLD D ++D G A +
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 196 EGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
G + T GT G++APE + + S D ++ G+ L E++ R P
Sbjct: 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 23/230 (10%)
Query: 29 RIFTYKELHTATNG---FSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFA 85
R +K L G F D LG GGFG V+ + A KL A +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLK 224
Query: 86 ---------VEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGE 135
VE ++L +V + ++ L Y T L +V M + H++
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 136 VQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
R + G+ +LH +II+RD+K NVLLD D ++D G A +
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 196 EGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
G + T GT G++APE + + S D ++ G+ L E++ R P
Sbjct: 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 60.1 bits (144), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/230 (26%), Positives = 94/230 (40%), Gaps = 23/230 (10%)
Query: 29 RIFTYKELHTATNG---FSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFA 85
R +K L G F D LG GGFG V+ + A KL A +
Sbjct: 170 RFLQWKWLEAQPMGEDWFLDFRVLGRGGFGEVFACQMK-----ATGKLYACKKLNKKRLK 224
Query: 86 ---------VEVEVLGRVRHKNLLGLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGE 135
VE ++L +V + ++ L Y T L +V M + H++
Sbjct: 225 KRKGYQGAMVEKKILAKVHSRFIVSL-AYAFETKTDLCLVMTIMNGGDIRYHIYNVDEDN 283
Query: 136 VQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
R + G+ +LH +II+RD+K NVLLD D ++D G A +
Sbjct: 284 PGFQEPRAIFYTAQIVSGLEHLHQR---NIIYRDLKPENVLLDDDGNVRISDLGLAVELK 340
Query: 196 EGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
G + T GT G++APE + + S D ++ G+ L E++ R P
Sbjct: 341 AGQTK-TKGYAGTPGFMAPELLLGEEYDFSVDYFALGVTLYEMIAARGPF 389
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSXQEYSDWKE 222
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/288 (22%), Positives = 122/288 (42%), Gaps = 37/288 (12%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G+G FG VY GR + I + ++ N F EV + RH+N++ G C
Sbjct: 41 IGKGRFGQVYHGRWHGEVAIRLIDIERDNEDQLKAFKREVMAYRQTRHENVVLFMGACMS 100
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
I+ +L S + ++ LD + +IA +G+ YLH I+H+
Sbjct: 101 PPHLAIITSLCKGRTLYSVVRD---AKIVLDVNKTRQIAQEIVKGMGYLH---AKGILHK 154
Query: 169 DIKASNVLLDSDFEPLVADFGF---AKLIPEGVSHMTTRVK-GTLGYLAPEYAMWGK--- 221
D+K+ NV D+ + ++ DFG + ++ G R++ G L +LAPE
Sbjct: 155 DLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRREDKLRIQNGWLCHLAPEIIRQLSPDT 213
Query: 222 ------VSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDP 275
S+ DV++ G + E+ P + P AE +I + +
Sbjct: 214 EEDKLPFSKHSDVFALGTIWYELHAREWPFKTQP----------AEAIIWQ------MGT 257
Query: 276 KLRGDFDENQL-KQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGK 322
++ + + + K+ ++ + C E E+RP ++++ L R +
Sbjct: 258 GMKPNLSQIGMGKEISDILLFCWAFEQEERPTFTKLMDMLEKLPKRNR 305
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/233 (29%), Positives = 106/233 (45%), Gaps = 43/233 (18%)
Query: 48 KLGEGGFGSVYWG---RTSDGLQIAVKKL--KAMNSKAEMEFAVEVEVLGRVR-HKNLLG 101
KLG+G +G V+ RT G +AVKK+ NS E+ +L + H+N++
Sbjct: 16 KLGKGAYGIVWKSIDRRT--GEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVN 73
Query: 102 LRGYCAGTDQR--LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
L + R +V+DYM + LH + L+ + + + I YLH
Sbjct: 74 LLNVLRADNDRDVYLVFDYME-----TDLHAVIRANI-LEPVHKQYVVYQLIKVIKYLH- 126
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKL----------IPEGVSHMT------- 202
+ ++HRD+K SN+LL+++ VADFG ++ IP ++ T
Sbjct: 127 --SGGLLHRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQ 184
Query: 203 ---TRVKGTLGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGG 251
T T Y APE + K ++ D++S G +L EIL G KPI PG
Sbjct: 185 PILTDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCG-KPI--FPGS 234
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 77/323 (23%), Positives = 136/323 (42%), Gaps = 43/323 (13%)
Query: 36 LHTATNGFSDD----NKLGEGGFGSVYWG-RTSDGLQIAVKKL--KAMNSKAEMEFAVEV 88
+ A+ FSD+ +LG+G F V + GL+ A K + K ++++ + E
Sbjct: 20 MMNASTKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREA 79
Query: 89 EVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIA 147
+ +++H N++ L +V+D + L + ++ E + +
Sbjct: 80 RICRKLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL- 138
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTR 204
E I Y H + I+HR++K N+LL S + +ADFG A I S
Sbjct: 139 ----ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHG 189
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI-----EKLPGGVKRTITEW 259
GT GYL+PE S+ D+++ G++L +L G P +L +K ++
Sbjct: 190 FAGTPGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDY 249
Query: 260 AEPL--IVKGKFKELVD------PKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
P V + K L+D PK R D QA+ V +C + + ++ V
Sbjct: 250 PSPEWDTVTPEAKSLIDSMLTVNPKKRITAD-----QALKVPWICNRERVASAIHRQDTV 304
Query: 312 NTLTGYDPR----GKVMQTRIET 330
+ L ++ R G ++ T I T
Sbjct: 305 DCLKKFNARRKLKGAILTTMIAT 327
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFA-VEVEVLGRV-RHKNLLGLR 103
+G G + V R T + V K + +N ++++ E V + H L+GL
Sbjct: 28 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 87
Query: 104 GYCAGTDQRLI-VYDYMPNLSLLSHLHGQ----------YAGEVQLDWKRRMKIAIGSAE 152
C T+ RL V +Y+ L+ H+ Q Y+ E+ L
Sbjct: 88 S-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL-------------- 132
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVS--HMTTRVKGTLG 210
+ YLH II+RD+K NVLLDS+ + D+G K EG+ T+ GT
Sbjct: 133 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 186
Query: 211 YLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
Y+APE S D ++ G+L+ E++ GR P +
Sbjct: 187 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 222
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 62/217 (28%), Positives = 93/217 (42%), Gaps = 38/217 (17%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GL+ A K +K S+A E EV +L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNII 78
Query: 101 GLRG-YCAGTDQRLIV--------YDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSA 151
L Y TD LI+ +D++ LS + LD
Sbjct: 79 TLHDVYENRTDVVLILELVSGGELFDFLAQKESLSEEEATSFIKQILD------------ 126
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKG 207
G+ YLH T I H D+K N++L P+ + DFG A I +GV + G
Sbjct: 127 -GVNYLH---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFG 180
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
T ++APE + + D++S G++ +L+G P
Sbjct: 181 TPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 93/210 (44%), Gaps = 28/210 (13%)
Query: 50 GEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGT 109
G FG V W +AVK + + K + EV L ++H+N+L G
Sbjct: 33 ARGRFGCV-WKAQLLNEYVAVK-IFPIQDKQSWQNEYEVYSLPGMKHENILQF----IGA 86
Query: 110 DQRLIVYDYMPNLSLLSHLH-----GQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV--- 161
++R D +L L++ H + + W IA A G+ YLH ++
Sbjct: 87 EKRGTSVDV--DLWLITAFHEKGSLSDFLKANVVSWNELCHIAETMARGLAYLHEDIPGL 144
Query: 162 ----TPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK-GTLGYLAPEY 216
P I HRDIK+ NVLL ++ +ADFG A G S T + GT Y+APE
Sbjct: 145 KDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYMAPE- 203
Query: 217 AMWGKVSES------CDVYSFGILLLEILT 240
+ G ++ D+Y+ G++L E+ +
Sbjct: 204 VLEGAINFQRDAFLRIDMYAMGLVLWELAS 233
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/291 (25%), Positives = 130/291 (44%), Gaps = 47/291 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKK-LKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG G G+V + + G +AVK+ L A ME + E H N++ R YC+
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVI--RYYCS 77
Query: 108 -GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR---MKIAIGSAEGILYLHHEVTP 163
TD+ L + + NL+L + + + L ++ + + A G+ +LH +
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 164 HIIHRDIKASNVLLDS-------------DFEPLVADFGFAKLIPEGVSHMTTRVK---G 207
IIHRD+K N+L+ + + L++DFG K + G S T + G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNLNNPSG 194
Query: 208 TLGYLAPEYAMWG-------KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWA 260
T G+ APE +++ S D++S G + IL+ K P G K +
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH----PFGDKYS----R 246
Query: 261 EPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
E I++G F +D +++ D + + +A ++ + +P KRP +V+
Sbjct: 247 ESNIIRGIFS--LD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.7 bits (143), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEIXINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 12/217 (5%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVL--GRVRHKNLLGLRGYC 106
LGEG +G V + K+ M + ++ E+ + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFYGHR 74
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGIT 127
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-SE 224
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
DV+S GI+L +L G P ++ P + ++W E
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/164 (30%), Positives = 74/164 (45%), Gaps = 34/164 (20%)
Query: 96 HKNLLGLRGYCAGTDQRLI-VYDYMPNLSLLSHLHGQ----------YAGEVQLDWKRRM 144
H L+GL C T+ RL V +Y+ L+ H+ Q Y+ E+ L
Sbjct: 112 HPFLVGLHS-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL------ 164
Query: 145 KIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV--SHMT 202
+ YLH II+RD+K NVLLDS+ + D+G K EG+ T
Sbjct: 165 --------ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTT 210
Query: 203 TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
+ GT Y+APE S D ++ G+L+ E++ GR P +
Sbjct: 211 STFCGTPNYIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 254
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFA-VEVEVLGRV-RHKNLLGLR 103
+G G + V R T + V K + +N ++++ E V + H L+GL
Sbjct: 17 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 76
Query: 104 GYCAGTDQRLI-VYDYMPNLSLLSHLHGQ----------YAGEVQLDWKRRMKIAIGSAE 152
C T+ RL V +Y+ L+ H+ Q Y+ E+ L
Sbjct: 77 S-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL-------------- 121
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV--SHMTTRVKGTLG 210
+ YLH II+RD+K NVLLDS+ + D+G K EG+ T+ GT
Sbjct: 122 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 175
Query: 211 YLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
Y+APE S D ++ G+L+ E++ GR P +
Sbjct: 176 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 211
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/226 (24%), Positives = 94/226 (41%), Gaps = 20/226 (8%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEME------FAVEVEVLGRVRHKNLLGL 102
+G+G FG V + +D ++ +K MN + +E E++++ + H L+ L
Sbjct: 23 IGKGSFGKVCIVQKNDTKKMYA--MKYMNKQKCVERNEVRNVFKELQIMQGLEHPFLVNL 80
Query: 103 RGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ +V D + L HL + + + + E ++ L +
Sbjct: 81 WYSFQDEEDMFMVVDLLLGGDLRYHLQQNVHFKEE-------TVKLFICELVMALDYLQN 133
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGK- 221
IIHRD+K N+LLD + DF A ++P T + GT Y+APE K
Sbjct: 134 QRIIHRDMKPDNILLDEHGHVHITDFNIAAMLPRETQ--ITTMAGTKPYMAPEMFSSRKG 191
Query: 222 --VSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIV 265
S + D +S G+ E+L GR+P + I E +V
Sbjct: 192 AGYSFAVDWWSLGVTAYELLRGRRPYHIRSSTSSKEIVHTFETTVV 237
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GL+ A K +K S+A E EV +L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 101 GLRG-YCAGTDQRLIVYDYMPNLSLLS--HLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
L Y TD LI L L+S L A + L + +G+ YL
Sbjct: 79 TLHDVYENRTDVVLI-------LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
H T I H D+K N++L P+ + DFG A I +GV + GT ++A
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVA 186
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
PE + + D++S G++ +L+G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 94/216 (43%), Gaps = 39/216 (18%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFA-VEVEVLGRV-RHKNLLGLR 103
+G G + V R T + V K + +N ++++ E V + H L+GL
Sbjct: 13 IGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQASNHPFLVGLH 72
Query: 104 GYCAGTDQRLI-VYDYMPNLSLLSHLHGQ----------YAGEVQLDWKRRMKIAIGSAE 152
C T+ RL V +Y+ L+ H+ Q Y+ E+ L
Sbjct: 73 S-CFQTESRLFFVIEYVNGGDLMFHMQRQRKLPEEHARFYSAEISL-------------- 117
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVS--HMTTRVKGTLG 210
+ YLH II+RD+K NVLLDS+ + D+G K EG+ T+ GT
Sbjct: 118 ALNYLHER---GIIYRDLKLDNVLLDSEGHIKLTDYGMCK---EGLRPGDTTSXFCGTPN 171
Query: 211 YLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIE 246
Y+APE S D ++ G+L+ E++ GR P +
Sbjct: 172 YIAPEILRGEDYGFSVDWWALGVLMFEMMAGRSPFD 207
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + + +A+K K S + E F E + + H +++ L
Sbjct: 18 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 77
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 78 GVITENPVWIIM-----ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLESK-- 130
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ + + DFG ++ + + + ++ K + ++APE + +
Sbjct: 131 -RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 189
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 190 TSASDVWMFGVCMWEILMHGVKPFQ 214
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 97/217 (44%), Gaps = 31/217 (14%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYC 106
LG GGFG V+ + D A+K+++ N + E + EV+ L ++ H ++ R +
Sbjct: 13 LGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIV--RYFN 70
Query: 107 A----GTDQRLI-----VYDYMP-NLSLLSHLHGQYAGEVQLDWKRR---MKIAIGSAEG 153
A T ++L VY Y+ L +L G ++ + R + I + AE
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT--------RV 205
+ +LH + ++HRD+K SN+ D V DFG + + T R
Sbjct: 131 VEFLH---SKGLMHRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARH 187
Query: 206 KGTLG---YLAPEYAMWGKVSESCDVYSFGILLLEIL 239
G +G Y++PE S D++S G++L E+L
Sbjct: 188 TGQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.3 bits (142), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GL+ A K +K S+A E EV +L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 101 GLRG-YCAGTDQRLIVYDYMPNLSLLS--HLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
L Y TD LI L L+S L A + L + +G+ YL
Sbjct: 79 TLHDVYENRTDVVLI-------LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
H T I H D+K N++L P+ + DFG A I +GV + GT ++A
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVA 186
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
PE + + D++S G++ +L+G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 69
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 126
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 183 LGXKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 91/205 (44%), Gaps = 15/205 (7%)
Query: 49 LGEGGFGSV----YWGRTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
+GEG FG V Y + + +A+K K S + E F E + + H +++ L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEALTMRQFDHPHIVKLI 457
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
G +I+ L L L + LD + A + + YL +
Sbjct: 458 GVITENPVWIIM-----ELCTLGELRSFLQVRKFSLDLASLILYAYQLSTALAYLE---S 509
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
+HRDI A NVL+ + + DFG ++ + + + ++ K + ++APE + +
Sbjct: 510 KRFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 223 SESCDVYSFGILLLEILT-GRKPIE 246
+ + DV+ FG+ + EIL G KP +
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQ 594
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GL+ A K +K S+A E EV +L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 101 GLRG-YCAGTDQRLIVYDYMPNLSLLS--HLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
L Y TD LI L L+S L A + L + +G+ YL
Sbjct: 79 TLHDVYENRTDVVLI-------LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
H T I H D+K N++L P+ + DFG A I +GV + GT ++A
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEF--KNIFGTPEFVA 186
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
PE + + D++S G++ +L+G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GL+ A K +K S+A E EV +L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 101 GLRG-YCAGTDQRLIVYDYMPNLSLLS--HLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
L Y TD LI L L+S L A + L + +G+ YL
Sbjct: 79 TLHDVYENRTDVVLI-------LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
H T I H D+K N++L P+ + DFG A I +GV + GT ++A
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVA 186
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
PE + + D++S G++ +L+G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V T V TL Y AP
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAP 173
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 11 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 69
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 70 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 126
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 127 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 182
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 183 LGCKYYSTAVDIWSLGCIFAEMVTRR 208
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 59.3 bits (142), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 8 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 66
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 67 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 123
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 124 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 179
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 180 LGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVR 95
AT+ + ++G G +G+VY R G +A+K ++ N + + + EV +L R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 96 ---HKNLLGLRGYCAG--TDQRL---IVYDYMPNLSLLSHLHGQ----YAGEVQLDWKRR 143
H N++ L CA TD+ + +V++++ + L ++L E D R+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
G+ +LH I+HRD+K N+L+ S +ADFG A++ ++
Sbjct: 121 F------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPV 171
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
V TL Y APE + + D++S G + E+ RKP+
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 63/211 (29%), Positives = 93/211 (44%), Gaps = 26/211 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GL+ A K +K S+A E EV +L +V H N++
Sbjct: 19 ELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNVI 78
Query: 101 GLRG-YCAGTDQRLIVYDYMPNLSLLS--HLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
L Y TD LI L L+S L A + L + +G+ YL
Sbjct: 79 TLHDVYENRTDVVLI-------LELVSGGELFDFLAQKESLSEEEATSFIKQILDGVNYL 131
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
H T I H D+K N++L P+ + DFG A I +GV + GT ++A
Sbjct: 132 H---TKKIAHFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKN--IFGTPEFVA 186
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
PE + + D++S G++ +L+G P
Sbjct: 187 PEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 62
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 119
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 61
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 118
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 61
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 118
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 62
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 119
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 176 LGXKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 91/204 (44%), Gaps = 17/204 (8%)
Query: 49 LGEGGFGSVYWGR-TSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G+G F V R G ++A+K + +N + + EV ++ + H N++ L
Sbjct: 23 IGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFREVRIMKILNHPNIVKLFEV 82
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ +Y + +L HG+ E + K R ++ + Y H +
Sbjct: 83 IETEKTLYLIMEYASGGEVFDYLVAHGRMK-EKEARSKFRQIVS-----AVQYCHQK--- 133
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
I+HRD+KA N+LLD+D +ADFGF+ V G Y APE K
Sbjct: 134 RIVHRDLKAENLLLDADMNIKIADFGFSNEFT--VGGKLDAFCGAPPYAAPELFQGKKYD 191
Query: 224 -ESCDVYSFGILLLEILTGRKPIE 246
DV+S G++L +++G P +
Sbjct: 192 GPEVDVWSLGVILYTLVSGSLPFD 215
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 62
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 119
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ ++ L + + L + + +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 120 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 175
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/211 (28%), Positives = 101/211 (47%), Gaps = 22/211 (10%)
Query: 49 LGEGGFGSVYWGRTSDGLQI-AVKKLKAMNSKAEMEFAV------EVEVLGRVRHKNLLG 101
LGEG F +VY R + QI A+KK+K + ++E + + E+++L + H N++G
Sbjct: 18 LGEGQFATVYKARDKNTNQIVAIKKIK-LGHRSEAKDGINRTALREIKLLQELSHPNIIG 76
Query: 102 LRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +V+D+M +L ++ + + M + +G+ YLH
Sbjct: 77 LLDAFGHKSNISLVFDFMETDLEVIIKDNSLVLTPSHIKAYMLMTL-----QGLEYLHQH 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
I+HRD+K +N+LLD + +ADFG AK +V T Y APE
Sbjct: 132 ---WILHRDLKPNNLLLDENGVLKLADFGLAKSFGSPNRAYXHQVV-TRWYRAPELLFGA 187
Query: 221 KV-SESCDVYSFGILLLEILTGRKPIEKLPG 250
++ D+++ G +L E+L R P LPG
Sbjct: 188 RMYGVGVDMWAVGCILAELLL-RVPF--LPG 215
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 49 LGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LG G F V RT + I KA+ K E E+ VL +++H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGK-EGSMENEIAVLHKIKHPNIVALDDI 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ + L + G Y + ++ + + YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH---DL 135
Query: 164 HIIHRDIKASNVL---LDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
I+HRD+K N+L LD D + +++DFG +K+ E + + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
S++ D +S G++ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/220 (31%), Positives = 100/220 (45%), Gaps = 28/220 (12%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSD---GLQIAVKKLKAMNSKAEMEFAVEVEV 90
+E+H AT+ +LG G FG V+ R D G Q AVKK++ +AE E+
Sbjct: 90 EEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE-----ELMA 138
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
+ ++ L G I + + SL GQ E + R +G
Sbjct: 139 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-----GQLVKEQGCLPEDRALYYLGQ 193
Query: 151 A-EGILYLHHEVTPHIIHRDIKASNVLLDSD-FEPLVADFGFA-KLIPEGV--SHMT-TR 204
A EG+ YLH I+H D+KA NVLL SD + DFG A L P+G+ S +T
Sbjct: 194 ALEGLEYLHSR---RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDY 250
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
+ GT ++APE + DV+S ++L +L G P
Sbjct: 251 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
+G G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +YMP + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D VADFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ ++ L + + L + + +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 175
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 58.9 bits (141), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ ++ L + + L + + +G+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 173
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 52/297 (17%)
Query: 49 LGEGGFGSVYWGRTSDGLQ-------IAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLL 100
LGEG FG V T+ L+ +AVK LK S +E+ + E VL +V H +++
Sbjct: 31 LGEGEFGKVV-KATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ--------------------YAGEVQLDW 140
L G C+ L++ +Y SL L + E L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 141 KRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH 200
+ A ++G+ YL ++HRD+ A N+L+ + ++DFG ++ + E S
Sbjct: 150 GDLISFAWQISQGMQYLAEM---KLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 201 MTTRVKGTL--GYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTIT 257
+ R +G + ++A E + DV+SFG+LL EI+T G P +P
Sbjct: 207 V-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------- 257
Query: 258 EWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ L+ R + +N ++ + + C + EP+KRP ++ L
Sbjct: 258 --------PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/211 (28%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
+G G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +YMP + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYMPGGDMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D VADFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 111/276 (40%), Gaps = 35/276 (12%)
Query: 43 FSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLL 100
F+ +++G+G FG VY G + ++ K+ + + + E+ VL + +
Sbjct: 21 FTKLDRIGKGSFGEVYKGIDNHTKEVVAIKIIDLEEAEDEIEDIQQEITVLSQCDSPYIT 80
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
G + + I+ +Y+ S L L E + I +G+ YLH E
Sbjct: 81 RYFGSYLKSTKLWIIMEYLGGGSALDLLKPGPLEETYI-----ATILREILKGLDYLHSE 135
Query: 161 VTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
IHRDIKA+NVLL + +ADFG A + + V GT ++APE
Sbjct: 136 ---RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV-GTPFWMAPEVIKQS 191
Query: 221 KVSESCDVYSFGILLLEILTGRKPIEKL-PGGVKRTITEWAEPLIV---KGKFKELVDPK 276
D++S GI +E+ G P L P V I + + P + FKE V+
Sbjct: 192 AYDFKADIWSLGITAIELAKGEPPNSDLHPMRVLFLIPKNSPPTLEGQHSKPFKEFVEA- 250
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
C+ +P RP KE++
Sbjct: 251 -------------------CLNKDPRFRPTAKELLK 267
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 48 KLGEGGFGSVYWGRT--SDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVR---HKNLL 100
++GEG +G V+ R + G +A+K+++ + M + EV VL + H N++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 101 GLRGYC--AGTDQRL---IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGIL 155
L C + TD+ +V++++ + L ++L V + + M + G+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLD 134
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPE 215
+LH ++HRD+K N+L+ S + +ADFG A++ T V TL Y APE
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPE 189
Query: 216 YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G + E+ RKP+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ ++ L + + L + + +G+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-SMDLKDFMDASALTGIPLPLIKSYLFQL--LQGL 118
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 174
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 73/297 (24%), Positives = 125/297 (42%), Gaps = 52/297 (17%)
Query: 49 LGEGGFGSVYWGRTSDGLQ-------IAVKKLKAMNSKAEM-EFAVEVEVLGRVRHKNLL 100
LGEG FG V T+ L+ +AVK LK S +E+ + E VL +V H +++
Sbjct: 31 LGEGEFGKVV-KATAFHLKGRAGYTTVAVKMLKENASPSELRDLLSEFNVLKQVNHPHVI 89
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQ--------------------YAGEVQLDW 140
L G C+ L++ +Y SL L + E L
Sbjct: 90 KLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERALTM 149
Query: 141 KRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH 200
+ A ++G+ YL ++HRD+ A N+L+ + ++DFG ++ + E S
Sbjct: 150 GDLISFAWQISQGMQYLAEM---SLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 201 MTTRVKGTL--GYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTIT 257
+ R +G + ++A E + DV+SFG+LL EI+T G P +P
Sbjct: 207 V-KRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIP-------- 257
Query: 258 EWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ L+ R + +N ++ + + C + EP+KRP ++ L
Sbjct: 258 --------PERLFNLLKTGHRMERPDNCSEEMYRLMLQCWKQEPDKRPVFADISKDL 306
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLVGIKHLH---SAGIIHRDLKPSNIVVKSDATLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 73
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 126
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 58.9 bits (141), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 13 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 71
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 72 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 124
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 125 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 184
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 185 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 221
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 12/217 (5%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVL--GRVRHKNLLGLRGYC 106
LGEG +G V + K+ M + ++ E+ + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 74
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 75 REGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGIT 127
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-SE 224
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +E
Sbjct: 128 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 187
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
DV+S GI+L +L G P ++ P + ++W E
Sbjct: 188 PVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/220 (30%), Positives = 98/220 (44%), Gaps = 28/220 (12%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSD---GLQIAVKKLKAMNSKAEMEFAVEVEV 90
+E+H AT+ +LG G FG V+ R D G Q AVKK++ +AE E+
Sbjct: 71 EEVHWATHQL----RLGRGSFGEVH--RMEDKQTGFQCAVKKVRLEVFRAE-----ELMA 119
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
+ ++ L G I + + SL GQ E + R +G
Sbjct: 120 CAGLTSPRIVPLYGAVREGPWVNIFMELLEGGSL-----GQLVKEQGCLPEDRALYYLGQ 174
Query: 151 A-EGILYLHHEVTPHIIHRDIKASNVLLDSD-FEPLVADFGFA-KLIPEGVSH---MTTR 204
A EG+ YLH + I+H D+KA NVLL SD + DFG A L P+G+
Sbjct: 175 ALEGLEYLH---SRRILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDY 231
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
+ GT ++APE + DV+S ++L +L G P
Sbjct: 232 IPGTETHMAPEVVLGRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 100/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 62
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLSFC 119
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 73
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 126
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 55/217 (25%), Positives = 95/217 (43%), Gaps = 12/217 (5%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVL--GRVRHKNLLGLRGYC 106
LGEG +G V + K+ M + ++ E+ + H+N++ G+
Sbjct: 14 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFYGHR 73
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 74 REGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGIT 126
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-SE 224
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +E
Sbjct: 127 HRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHAE 186
Query: 225 SCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
DV+S GI+L +L G P ++ P + ++W E
Sbjct: 187 PVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 73
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 126
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 73
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 126
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 58.5 bits (140), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 97/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG +G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 15 LGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 73
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 74 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 126
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 127 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 186
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 187 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 223
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 105/222 (47%), Gaps = 28/222 (12%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVR 95
AT+ + ++G G +G+VY R G +A+K ++ N + + + EV +L R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 96 ---HKNLLGLRGYCAG--TDQRL---IVYDYMPNLSLLSHLHGQ----YAGEVQLDWKRR 143
H N++ L CA TD+ + +V++++ + L ++L E D R+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
G+ +LH I+HRD+K N+L+ S +ADFG A++ ++
Sbjct: 121 F------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPV 171
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
V TL Y APE + + D++S G + E+ RKP+
Sbjct: 172 VV--TLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 101/206 (49%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 61
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + + L + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQGLAFC 118
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAVEVEVLGR-VRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A VL + V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G FG V R ++ KL + M +++ F E + + + Y
Sbjct: 77 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 136
Query: 106 CAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
D+ L +V +YMP L+ +L Y +V W R +AE +L L +
Sbjct: 137 AFQDDRYLYMVMEYMPGGDLV-NLMSNY--DVPEKWAR-----FYTAEVVLALDAIHSMG 188
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEYAMW---- 219
IHRD+K N+LLD +ADFG K+ EG+ T V GT Y++PE
Sbjct: 189 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 247
Query: 220 GKVSESCDVYSFGILLLEILTGRKPI 245
G CD +S G+ L E+L G P
Sbjct: 248 GYYGRECDWWSVGVFLYEMLVGDTPF 273
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 58.5 bits (140), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 48 KLGEGGFGSVYWGRT--SDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVR---HKNLL 100
++GEG +G V+ R + G +A+K+++ + M + EV VL + H N++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 101 GLRGYC--AGTDQRL---IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGIL 155
L C + TD+ +V++++ + L ++L V + + M + G+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLD 134
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPE 215
+LH ++HRD+K N+L+ S + +ADFG A++ T V TL Y APE
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPE 189
Query: 216 YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G + E+ RKP+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 58.5 bits (140), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKVVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 126/291 (43%), Gaps = 46/291 (15%)
Query: 30 IFTYKELHTATNGFSDDNKLGEGGFGSVYWG-RTSDGLQIAVKKLKAMNSKAEM-EFAVE 87
+ Y ELH +G GGF V G +A+K + +++ E
Sbjct: 8 LLKYYELHET---------IGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTE 58
Query: 88 VEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIA 147
+E L +RH+++ L ++ +V +Y P L ++ Q + + R +
Sbjct: 59 IEALKNLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQ--DRLSEEETRVVFRQ 116
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVS--HMTTRV 205
I SA + Y+H + H RD+K N+L D + + DFG P+G H+ T
Sbjct: 117 IVSA--VAYVHSQGYAH---RDLKPENLLFDEYHKLKLIDFGLCA-KPKGNKDYHLQT-C 169
Query: 206 KGTLGYLAPEYAMWGK--VSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPL 263
G+L Y APE + GK + DV+S GILL ++ G P +
Sbjct: 170 CGSLAYAAPE-LIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDN-------------- 214
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVL--CVQSEPEKRPNMKEVVN 312
V +K++ +RG +D + ++ +L +Q +P+KR +MK ++N
Sbjct: 215 -VMALYKKI----MRGKYDVPKWLSPSSILLLQQMLQVDPKKRISMKNLLN 260
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/176 (29%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAVEVEVLGR-VRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A VL + V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLSQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDATLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G FG V R ++ KL + M +++ F E + + + Y
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 106 CAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
D+ L +V +YMP L+ +L Y +V W R +AE +L L +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLV-NLMSNY--DVPEKWAR-----FYTAEVVLALDAIHSMG 193
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEYAMW---- 219
IHRD+K N+LLD +ADFG K+ EG+ T V GT Y++PE
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 220 GKVSESCDVYSFGILLLEILTGRKPI 245
G CD +S G+ L E+L G P
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 90/206 (43%), Gaps = 18/206 (8%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKA---MNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G FG V R ++ KL + M +++ F E + + + Y
Sbjct: 82 IGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQLFY 141
Query: 106 CAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
D+ L +V +YMP L+ +L Y +V W R +AE +L L +
Sbjct: 142 AFQDDRYLYMVMEYMPGGDLV-NLMSNY--DVPEKWAR-----FYTAEVVLALDAIHSMG 193
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEYAMW---- 219
IHRD+K N+LLD +ADFG K+ EG+ T V GT Y++PE
Sbjct: 194 FIHRDVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAV-GTPDYISPEVLKSQGGD 252
Query: 220 GKVSESCDVYSFGILLLEILTGRKPI 245
G CD +S G+ L E+L G P
Sbjct: 253 GYYGRECDWWSVGVFLYEMLVGDTPF 278
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 21/224 (9%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLK---AMNSKAEME-FAVEVE 89
KE+ F +G G FG V + + +I K+ M +AE F E +
Sbjct: 67 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 126
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPN---LSLLSHLHGQYAGEVQLDWKRRMKI 146
VL + + L + +V DY L+LLS + ++ + M +
Sbjct: 127 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 186
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
AI S + H +HRDIK NVLLD + +ADFG + + + ++
Sbjct: 187 AIDSIHQL---------HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 237
Query: 207 GTLGYLAPEY--AM---WGKVSESCDVYSFGILLLEILTGRKPI 245
GT Y++PE AM GK CD +S G+ + E+L G P
Sbjct: 238 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 281
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 55/210 (26%), Positives = 101/210 (48%), Gaps = 21/210 (10%)
Query: 48 KLGEGGFGSVYWGRT--SDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVR---HKNLL 100
++GEG +G V+ R + G +A+K+++ + M + EV VL + H N++
Sbjct: 18 EIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVV 77
Query: 101 GLRGYC--AGTDQRL---IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGIL 155
L C + TD+ +V++++ + L ++L V + + M + G+
Sbjct: 78 RLFDVCTVSRTDRETKLTLVFEHV-DQDLTTYLDKVPEPGVPTETIKDMMFQL--LRGLD 134
Query: 156 YLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPE 215
+LH ++HRD+K N+L+ S + +ADFG A++ T V TL Y APE
Sbjct: 135 FLHSH---RVVHRDLKPQNILVTSSGQIKLADFGLARIY--SFQMALTSVVVTLWYRAPE 189
Query: 216 YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G + E+ RKP+
Sbjct: 190 VLLQSSYATPVDLWSVGCIFAEMFR-RKPL 218
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 112
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 113 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 168
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 169 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 222
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 58.2 bits (139), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 61/224 (27%), Positives = 94/224 (41%), Gaps = 21/224 (9%)
Query: 34 KELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKLK---AMNSKAEME-FAVEVE 89
KE+ F +G G FG V + + +I K+ M +AE F E +
Sbjct: 83 KEMQLHREDFEIIKVIGRGAFGEVAVVKMKNTERIYAMKILNKWEMLKRAETACFREERD 142
Query: 90 VLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPN---LSLLSHLHGQYAGEVQLDWKRRMKI 146
VL + + L + +V DY L+LLS + ++ + M +
Sbjct: 143 VLVNGDCQWITALHYAFQDENHLYLVMDYYVGGDLLTLLSKFEDKLPEDMARFYIGEMVL 202
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVK 206
AI S + H +HRDIK NVLLD + +ADFG + + + ++
Sbjct: 203 AIDSIHQL---------HYVHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAV 253
Query: 207 GTLGYLAPEY--AM---WGKVSESCDVYSFGILLLEILTGRKPI 245
GT Y++PE AM GK CD +S G+ + E+L G P
Sbjct: 254 GTPDYISPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPF 297
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 58.2 bits (139), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 101/209 (48%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + + L + + +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKTFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 175
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 58.2 bits (139), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/222 (26%), Positives = 103/222 (46%), Gaps = 28/222 (12%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRVR 95
AT+ + ++G G +G+VY R G +A+K ++ N + + + EV +L R+
Sbjct: 2 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE 61
Query: 96 ---HKNLLGLRGYCAG--TDQRL---IVYDYMPNLSLLSHLHGQ----YAGEVQLDWKRR 143
H N++ L CA TD+ + +V++++ + L ++L E D R+
Sbjct: 62 AFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDLMRQ 120
Query: 144 MKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTT 203
G+ +LH I+HRD+K N+L+ S +ADFG A++
Sbjct: 121 F------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQMALD 169
Query: 204 RVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
V TL Y APE + + D++S G + E+ RKP+
Sbjct: 170 PVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 210
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 22/169 (13%)
Query: 87 EVEVLGRVR-HKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMK 145
E +L +V H +++ L + +V+D M L +L +V L K
Sbjct: 149 ETHILRQVAGHPHIITLIDSYESSSFMFLVFDLMRKGELFDYL----TEKVALSEKETRS 204
Query: 146 IAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRV 205
I E + +LH +I+HRD+K N+LLD + + ++DFGF+ + G +
Sbjct: 205 IMRSLLEAVSFLH---ANNIVHRDLKPENILLDDNMQIRLSDFGFSCHLEPG--EKLREL 259
Query: 206 KGTLGYLAPE---------YAMWGKVSESCDVYSFGILLLEILTGRKPI 245
GT GYLAPE + +GK D+++ G++L +L G P
Sbjct: 260 CGTPGYLAPEILKCSMDETHPGYGK---EVDLWACGVILFTLLAGSPPF 305
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.8 bits (138), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKK-LKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG G G+V + + G +AVK+ L A ME + E H N++ R YC+
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVI--RYYCS 95
Query: 108 -GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR---MKIAIGSAEGILYLHHEVTP 163
TD+ L + + NL+L + + + L ++ + + A G+ +LH +
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 164 HIIHRDIKASNVLLDS-------------DFEPLVADFGFAKLIPEGVSHMTTRVK---G 207
IIHRD+K N+L+ + + L++DFG K + G + G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 208 TLGYLAPEY---AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLI 264
T G+ APE + +++ S D++S G + IL+ K P G K + E I
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH----PFGDKYS----RESNI 264
Query: 265 VKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++G F +D +++ D + + +A ++ + +P KRP +V+
Sbjct: 265 IRGIFS--LD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
>pdb|1YXS|A Chain A, Crystal Structure Of Kinase Pim1 With P123m Mutation
Length = 293
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 70/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + M P L + + G +Q + R + E + + H
Sbjct: 76 IRLLDWFERPDSFVLILERMEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 131
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 132 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 185
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 226
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 227 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 258
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKK-LKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG G G+V + + G +AVK+ L A ME + E H N++ R YC+
Sbjct: 41 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTESDD---HPNVI--RYYCS 95
Query: 108 -GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR---MKIAIGSAEGILYLHHEVTP 163
TD+ L + + NL+L + + + L ++ + + A G+ +LH +
Sbjct: 96 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 152
Query: 164 HIIHRDIKASNVLLDS-------------DFEPLVADFGFAKLIPEGVSHMTTRVK---G 207
IIHRD+K N+L+ + + L++DFG K + G + G
Sbjct: 153 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 212
Query: 208 TLGYLAPEY---AMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLI 264
T G+ APE + +++ S D++S G + IL+ K P G K + E I
Sbjct: 213 TSGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKH----PFGDKYS----RESNI 264
Query: 265 VKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++G F +D +++ D + + +A ++ + +P KRP +V+
Sbjct: 265 IRGIFS--LD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 308
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.8 bits (138), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 85/176 (48%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ G
Sbjct: 168 LDFGLART--AGTSFMMTPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 221
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 100/218 (45%), Gaps = 19/218 (8%)
Query: 43 FSDDNKLGEGGFGSVYWG--RTSDG--LQIAVKKLKA--MNSKAEMEFAVEVEVLGRVRH 96
F+ LG+G FGSV + DG +++AVK LKA + S EF E + H
Sbjct: 25 FTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLREAACMKEFDH 84
Query: 97 KNLLGLRGYCAGTDQR------LIVYDYMPNLSLLSHLHGQYAGE--VQLDWKRRMKIAI 148
++ L G + + +++ +M + L + L GE L + ++ +
Sbjct: 85 PHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASRIGENPFNLPLQTLVRFMV 144
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMT-TRVKG 207
A G+ YL + + IHRD+ A N +L D VADFG ++ I G + K
Sbjct: 145 DIACGMEYLS---SRNFIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGDYYRQGCASKL 201
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKP 244
+ +LA E + DV++FG+ + EI+T G+ P
Sbjct: 202 PVKWLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTP 239
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 49 LGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LG G F V RT + I +A+ K E E+ VL +++H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDI 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ + L + G Y + ++ + + YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH---DL 135
Query: 164 HIIHRDIKASNVL---LDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
I+HRD+K N+L LD D + +++DFG +K+ E + + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
S++ D +S G++ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 49 LGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LG G F V RT + I +A+ K E E+ VL +++H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDI 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ + L + G Y + ++ + + YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH---DL 135
Query: 164 HIIHRDIKASNVL---LDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
I+HRD+K N+L LD D + +++DFG +K+ E + + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
S++ D +S G++ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 21/218 (9%)
Query: 39 ATNGFSDDNK----LGEGGFGSVYWGRTS-DGLQIAVKKL--KAMNSKAEMEFAV-EVEV 90
+T FSD K LG+G FG V + G + AVK + + + K + E + EV++
Sbjct: 20 STAIFSDRYKGQRVLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQL 79
Query: 91 LGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGS 150
L ++ H N+ L + +V + L + + ++D R ++ +
Sbjct: 80 LKQLDHPNIXKLYEFFEDKGYFYLVGEVYTGGELFDEIISRKRFS-EVDAARIIRQVLS- 137
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKG 207
GI Y H I+HRD+K N+LL+S D + DFG + E ++ G
Sbjct: 138 --GITYXHKN---KIVHRDLKPENLLLESKSKDANIRIIDFGLSTHF-EASKKXKDKI-G 190
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
T Y+APE + G E CDV+S G++L +L+G P
Sbjct: 191 TAYYIAPE-VLHGTYDEKCDVWSTGVILYILLSGCPPF 227
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/225 (26%), Positives = 102/225 (45%), Gaps = 31/225 (13%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKA-----EMEFAVEVEVLG 92
AT+ + ++G G +G+VY R G +A+K ++ N + EV +L
Sbjct: 7 ATSRYEPVAEIGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLR 66
Query: 93 RVR---HKNLLGLRGYCAG--TDQRL---IVYDYMPNLSLLSHLHGQ----YAGEVQLDW 140
R+ H N++ L CA TD+ + +V++++ + L ++L E D
Sbjct: 67 RLEAFEHPNVVRLMDVCATSRTDREIKVTLVFEHV-DQDLRTYLDKAPPPGLPAETIKDL 125
Query: 141 KRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSH 200
R+ G+ +LH I+HRD+K N+L+ S +ADFG A++
Sbjct: 126 MRQF------LRGLDFLHANC---IVHRDLKPENILVTSGGTVKLADFGLARIY--SYQM 174
Query: 201 MTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
T V TL Y APE + + D++S G + E+ RKP+
Sbjct: 175 ALTPVVVTLWYRAPEVLLQSTYATPVDMWSVGCIFAEMFR-RKPL 218
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 88/205 (42%), Gaps = 20/205 (9%)
Query: 49 LGEGGFGSVYWG---RTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LG G F V RT + I +A+ K E E+ VL +++H N++ L
Sbjct: 26 LGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGK-EGSMENEIAVLHKIKHPNIVALDDI 84
Query: 106 CAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ + L + G Y + ++ + + YLH
Sbjct: 85 YESGGHLYLIMQLVSGGELFDRIVEKGFYTE------RDASRLIFQVLDAVKYLH---DL 135
Query: 164 HIIHRDIKASNVL---LDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
I+HRD+K N+L LD D + +++DFG +K+ E + + GT GY+APE
Sbjct: 136 GIVHRDLKPENLLYYSLDEDSKIMISDFGLSKM--EDPGSVLSTACGTPGYVAPEVLAQK 193
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
S++ D +S G++ +L G P
Sbjct: 194 PYSKAVDCWSIGVIAYILLCGYPPF 218
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 175
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 118
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 174
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEY 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 172
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 57.4 bits (137), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/205 (29%), Positives = 96/205 (46%), Gaps = 27/205 (13%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGY 105
+G G G V T G+ +AVKKL + ++ + A E+ +L V HKN++ L
Sbjct: 30 IGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTHAKRAYRELVLLKCVNHKNIISLLN- 88
Query: 106 CAGTDQRLI-----VYDYM----PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
T Q+ + VY M NL + H+ +LD +R + GI +
Sbjct: 89 -VFTPQKTLEEFQDVYLVMELMDANLCQVIHM--------ELDHERMSYLLYQMLCGIKH 139
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
LH + IIHRD+K SN+++ SD + DFG A+ + M T T Y APE
Sbjct: 140 LH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLART--ASTNFMMTPYVVTRYYRAPEV 194
Query: 217 AMWGKVSESCDVYSFGILLLEILTG 241
+ E+ D++S G ++ E++ G
Sbjct: 195 ILGMGYKENVDIWSVGCIMGELVKG 219
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 118
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 119 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 174
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 57.0 bits (136), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 172
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 5 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 63
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 64 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 120
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 121 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 176
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 177 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 205
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 172
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 3 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 61
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 62 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 118
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 119 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 174
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 175 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 203
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 175
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLK-----AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
+G G +G V R G Q+A+KK+ N+K + E+++L +H N++ +
Sbjct: 62 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKHDNIIAI 118
Query: 103 RGYCAGT------DQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
+ T +V D M S LH L + G+ Y
Sbjct: 119 KDILRPTVPYGEFKSVYVVLDLME-----SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 173
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKGTLGYLA 213
+H + +IHRD+K SN+L++ + E + DFG A+ + P + T T Y A
Sbjct: 174 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 230
Query: 214 PEYAM-WGKVSESCDVYSFGILLLEILTGRK 243
PE + + +++ D++S G + E+L R+
Sbjct: 231 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 261
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 118 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 173
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 2 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 60
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 61 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 117
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 118 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 173
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 174 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKDFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 117 AFCHSH---RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 172
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 5 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 63
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 64 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 120
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V V TL Y APE
Sbjct: 121 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 176
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 177 LGCKYYSTAVDIWSLGCIFAEMVTRR 202
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 61
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 118
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+ K++ ++++ E + E+ +L + H
Sbjct: 4 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHP 62
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 63 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 119
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 120 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 175
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 176 LGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+ K++ ++++ E + E+ +L + H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALXKIR-LDTETEGVPSTAIREISLLKELNHP 61
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 118
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V T V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVV-TLWYRAPEIL 174
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 91/211 (43%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
+G G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 IGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D VADFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 99/206 (48%), Gaps = 13/206 (6%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRVRHK 97
F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L + H
Sbjct: 3 NFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKELNHP 61
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
N++ L ++ +V++++ + L + + L + + +G+ +
Sbjct: 62 NIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGLAFC 118
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRD+K N+L++++ +ADFG A+ V V TL Y APE
Sbjct: 119 HSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAPEIL 174
Query: 218 MWGK-VSESCDVYSFGILLLEILTGR 242
+ K S + D++S G + E++T R
Sbjct: 175 LGCKYYSTAVDIWSLGCIFAEMVTRR 200
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 50/176 (28%), Positives = 84/176 (47%), Gaps = 8/176 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 54 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 113
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 114 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 169
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
DFG A+ G S M T Y APE + E+ D++S G ++ E++ G
Sbjct: 170 LDFGLART--AGTSFMMVPFVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMIKG 223
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 1 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 59
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 60 NHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 116
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 117 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 172
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 173 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 201
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 93/198 (46%), Gaps = 12/198 (6%)
Query: 48 KLGEGGFGSVYWGRTSDGLQI-AVKK-LKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRG 104
K+GEG +G V+ R D QI A+KK L++ + + A+ E+ +L +++H NL+ L
Sbjct: 10 KIGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLE 69
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ +V++Y + L H +Y V + + A + H+
Sbjct: 70 VFRRKRRLHLVFEYCDHTVL--HELDRYQRGVPEHLVKSITWQTLQAVNFCHKHN----- 122
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG-KVS 223
IHRD+K N+L+ + DFGFA+L+ G S T Y +PE + +
Sbjct: 123 CIHRDVKPENILITKHSVIKLCDFGFARLL-TGPSDYYDDEVATRWYRSPELLVGDTQYG 181
Query: 224 ESCDVYSFGILLLEILTG 241
DV++ G + E+L+G
Sbjct: 182 PPVDVWAIGCVFAELLSG 199
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 57.0 bits (136), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 93/211 (44%), Gaps = 27/211 (12%)
Query: 49 LGEGGFGSVYWGRTS-DGLQIAVKKLK-----AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
+G G +G V R G Q+A+KK+ N+K + E+++L +H N++ +
Sbjct: 63 IGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLR---ELKILKHFKHDNIIAI 119
Query: 103 RGYCAGT------DQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY 156
+ T +V D M S LH L + G+ Y
Sbjct: 120 KDILRPTVPYGEFKSVYVVLDLME-----SDLHQIIHSSQPLTLEHVRYFLYQLLRGLKY 174
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKGTLGYLA 213
+H + +IHRD+K SN+L++ + E + DFG A+ + P + T T Y A
Sbjct: 175 MH---SAQVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQYFMTEYVATRWYRA 231
Query: 214 PEYAM-WGKVSESCDVYSFGILLLEILTGRK 243
PE + + +++ D++S G + E+L R+
Sbjct: 232 PELMLSLHEYTQAIDLWSVGCIFGEMLARRQ 262
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 96/218 (44%), Gaps = 14/218 (6%)
Query: 49 LGEGGFGSVYWGR---TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
LGEG G V T + + + + +K E E+ + + H+N++ G+
Sbjct: 14 LGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPE-NIKKEICINKMLNHENVVKFYGH 72
Query: 106 CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+ + + +Y L + G + D +R + G++YLH I
Sbjct: 73 RREGNIQYLFLEYCSGGELFDRIEPD-IGMPEPDAQRFFHQLMA---GVVYLH---GIGI 125
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIP-EGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
HRDIK N+LLD ++DFG A + + ++ GTL Y+APE + +
Sbjct: 126 THRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREFHA 185
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAE 261
E DV+S GI+L +L G P ++ P + ++W E
Sbjct: 186 EPVDVWSCGIVLTAMLAGELPWDQ-PSDSCQEYSDWKE 222
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 70 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 129
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 130 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 176
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 177 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 228
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 229 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 259
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 71/237 (29%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 17 LTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD---GLQIAVKKL 73
LT P + +R +E+H T+ +LG G FG V+ R D G Q AVKK+
Sbjct: 56 LTEKLKPVDYEYR----EEVHWMTH----QPRLGRGSFGEVH--RMKDKQTGFQCAVKKV 105
Query: 74 KAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYA 133
+ + E E+ + ++ L G I + + SL GQ
Sbjct: 106 RLEVFRVE-----ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-----GQLI 155
Query: 134 GEVQLDWKRRMKIAIGSA-EGILYLHHEVTPHIIHRDIKASNVLLDSD-FEPLVADFGFA 191
++ + R +G A EG+ YLH T I+H D+KA NVLL SD + DFG A
Sbjct: 156 KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 212
Query: 192 -KLIPEGV--SHMT-TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
L P+G+ S +T + GT ++APE M D++S ++L +L G P
Sbjct: 213 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------------- 148
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 149 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 200
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/213 (27%), Positives = 95/213 (44%), Gaps = 21/213 (9%)
Query: 40 TNGFSDDNKLGEGGFGSVYWGRTSDGLQ--IAVKKLKAMNSKAEMEFAVEVEVLGRVRHK 97
++ F +++LG G VY + G Q A+K LK K + E+ VL R+ H
Sbjct: 52 SDFFEVESELGRGATSIVYRCK-QKGTQKPYALKVLKKTVDKKIVR--TEIGVLLRLSHP 108
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL--HGQYAGEVQLDWKRRMKIAIGSAEGIL 155
N++ L+ + +V + + L + G Y+ D +++ E +
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELFDRIVEKGYYSERDAADAVKQI------LEAVA 162
Query: 156 YLHHEVTPHIIHRDIKASNVLLDS---DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYL 212
YLH I+HRD+K N+L + D +ADFG +K++ V T V GT GY
Sbjct: 163 YLHEN---GIVHRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKT--VCGTPGYC 217
Query: 213 APEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
APE D++S GI+ +L G +P
Sbjct: 218 APEILRGCAYGPEVDMWSVGIITYILLCGFEPF 250
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 56.6 bits (135), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 42 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 101
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 102 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 148
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 149 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 200
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 231
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 100/209 (47%), Gaps = 13/209 (6%)
Query: 39 ATNGFSDDNKLGEGGFGSVYWGRTS-DGLQIAVKKLKAMNSKAEMEFAV---EVEVLGRV 94
+ F K+GEG +G VY R G +A+KK++ ++++ E + E+ +L +
Sbjct: 4 SMENFQKVEKIGEGTYGVVYKARNKLTGEVVALKKIR-LDTETEGVPSTAIREISLLKEL 62
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L ++ +V++++ + L + + L + + +G+
Sbjct: 63 NHPNIVKLLDVIHTENKLYLVFEHV-DQDLKKFMDASALTGIPLPLIKSYLFQL--LQGL 119
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
+ H ++HRD+K N+L++++ +ADFG A+ V V TL Y AP
Sbjct: 120 AFCHSH---RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVV-TLWYRAP 175
Query: 215 EYAMWGK-VSESCDVYSFGILLLEILTGR 242
E + K S + D++S G + E++T R
Sbjct: 176 EILLGCKYYSTAVDIWSLGCIFAEMVTRR 204
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 49 LGEGGFGSV---YWGRTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLR 103
+G G +GSV Y R ++AVKKL + S E+ +L ++H+N++GL
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 104 G-YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ T Y+ + + L+ + D + + G+ Y+H +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WGK 221
IIHRD+K SNV ++ D E + DFG A+ E MT V T Y APE + W
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADE---EMTGYV-ATRWYRAPEIMLNWMH 205
Query: 222 VSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+L G+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|4DFX|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
And Amp-Pnp
pdb|4DFZ|E Chain E, Crystal Structure Of Myristoylated K7c Catalytic Subunit
Of Camp- Dependent Protein Kinase In Complex With Sp20
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 69/260 (26%), Positives = 106/260 (40%), Gaps = 39/260 (15%)
Query: 2 GSAFSCCGSEK--VEEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYW 59
+A +C GSE+ V+E L W T + + F LG G FG V
Sbjct: 2 NAAAACKGSEQESVKEFLAKAKEDFLKKWE--TPSQNTAQLDQFDRIKTLGTGSFGRVML 59
Query: 60 GRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIV 115
+ + G A+K K K + K E +L V L+ L +V
Sbjct: 60 VKHKESGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMV 119
Query: 116 YDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHI 165
+Y+ + SHL H + YA ++ L ++ YLH + +
Sbjct: 120 MEYVAGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE--------------YLH---SLDL 162
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSES 225
I+RD+K N+L+D V DFGFAK V T + GT YLAPE + +++
Sbjct: 163 IYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKA 218
Query: 226 CDVYSFGILLLEILTGRKPI 245
D ++ G+L+ E+ G P
Sbjct: 219 VDWWALGVLIYEMAAGYPPF 238
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 56.2 bits (134), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 103/227 (45%), Gaps = 24/227 (10%)
Query: 34 KELHTATNGFSDDNKLGEG-GFGSVYWGR----TSDGLQIAVKKLKAMNSKAEMEFAVEV 88
++LH + F+D ++ E G GS + + ++ AVK + K++ + E+
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNMEFAVKII----DKSKRDPTEEI 66
Query: 89 EVLGRV-RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH-LHGQYAGEVQLDWKRRMKI 146
E+L R +H N++ L+ +V + M LL L ++ E + +
Sbjct: 67 EILLRYGQHPNIITLKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSE-----REASAV 121
Query: 147 AIGSAEGILYLHHEVTPHIIHRDIKASNVL-LDSDFEP---LVADFGFAKLIPEGVSHMT 202
+ + YLH + ++HRD+K SN+L +D P + DFGFAK + +
Sbjct: 122 LFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLM 178
Query: 203 TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLP 249
T T ++APE +CD++S G+LL +LTG P P
Sbjct: 179 TPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTMLTGYTPFANGP 224
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2YCR|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv976
Length = 323
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 96/217 (44%), Gaps = 37/217 (17%)
Query: 49 LGEGGFGSV---YWGRTSDGLQIAV--KKLKAMNSKAEMEFAV----EVEVLGRVRHKNL 99
LG G G V + +T + I + K+ A+ S E + A+ E+E+L ++ H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------G 153
+ ++ + D IV + M L + G +R+K A
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLA 126
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
+ YLH IIHRD+K NVLL S E + DFG +K++ G + + + GT
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 211 YLAPEYAM---WGKVSESCDVYSFGILLLEILTGRKP 244
YLAPE + + + D +S G++L L+G P
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPP 218
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 90/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 35 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 94
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+P + SHL H + YA ++ L ++
Sbjct: 95 SFKDNSNLYMVMEYVPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 141
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 142 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWTLCGTPEYLAP 193
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 194 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 224
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 55.8 bits (133), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 49 LGEGGFGSV---YWGRTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLR 103
+G G +GSV Y R ++AVKKL + S E+ +L ++H+N++GL
Sbjct: 28 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 85
Query: 104 G-YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ T Y+ + + L+ + D + + G+ Y+H +
Sbjct: 86 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---S 141
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WGK 221
IIHRD+K SNV ++ D E + DFG A+ E MT V T Y APE + W
Sbjct: 142 AGIIHRDLKPSNVAVNEDCELRILDFGLARQADE---EMTGYV-ATRWYRAPEIMLNWMH 197
Query: 222 VSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+L G+
Sbjct: 198 YNQTVDIWSVGCIMAELLQGK 218
>pdb|2YCF|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1531
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 57/273 (20%)
Query: 49 LGEGGFGSV---YWGRTSDGLQIAV--KKLKAMNSKAEMEFAV----EVEVLGRVRHKNL 99
LG G G V + +T + I + K+ A+ S E + A+ E+E+L ++ H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------G 153
+ ++ + D IV + M L + G +R+K A
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLA 126
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
+ YLH IIHRD+K NVLL S E + DFG +K++ G + + + GT
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 211 YLAPEYAM---WGKVSESCDVYSFGILLLEILTGRKPI----------EKLPGGVKRTIT 257
YLAPE + + + D +S G++L L+G P +++ G I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 258 E-WAEPLIVKGKFKEL------VDPKLRGDFDE 283
E WAE V K +L VDPK R +E
Sbjct: 242 EVWAE---VSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|2W0J|A Chain A, Crystal Structure Of Chk2 In Complex With Nsc 109555, A
Specific Inhibitor
pdb|2W7X|A Chain A, Cellular Inhibition Of Checkpoint Kinase 2 And
Potentiation Of Cytotoxic Drugs By Novel Chk2 Inhibitor
Pv1019
pdb|2YIQ|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1322
pdb|2YIR|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1352
pdb|2YIT|A Chain A, Structural Analysis Of Checkpoint Kinase 2 In Complex With
Pv1162, A Novel Inhibitor
pdb|2YCQ|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Inhibitor Pv1115
pdb|2YCS|A Chain A, Crystal Structure Of Checkpoint Kinase 2 In Complex With
Pv788
Length = 323
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 57/273 (20%)
Query: 49 LGEGGFGSV---YWGRTSD--GLQIAVKKLKAMNSKAEMEFAV----EVEVLGRVRHKNL 99
LG G G V + +T ++I K+ A+ S E + A+ E+E+L ++ H +
Sbjct: 18 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 77
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------G 153
+ ++ + D IV + M L + G +R+K A
Sbjct: 78 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLA 126
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
+ YLH IIHRD+K NVLL S E + DFG +K++ G + + + GT
Sbjct: 127 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 181
Query: 211 YLAPEYAM---WGKVSESCDVYSFGILLLEILTGRKPI----------EKLPGGVKRTIT 257
YLAPE + + + D +S G++L L+G P +++ G I
Sbjct: 182 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 241
Query: 258 E-WAEPLIVKGKFKEL------VDPKLRGDFDE 283
E WAE V K +L VDPK R +E
Sbjct: 242 EVWAE---VSEKALDLVKKLLVVDPKARFTTEE 271
>pdb|3I6U|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6U|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 419
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 57/268 (21%)
Query: 49 LGEGGFGSV---YWGRTSD--GLQIAVKKLKAMNSKAEMEFAV----EVEVLGRVRHKNL 99
LG G G V + +T ++I K+ A+ S E + A+ E+E+L ++ H +
Sbjct: 143 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 202
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------G 153
+ ++ + D IV + M L + G +R+K A
Sbjct: 203 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLA 251
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
+ YLH IIHRD+K NVLL S E + DFG +K++ G + + + GT
Sbjct: 252 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 306
Query: 211 YLAPEYAM---WGKVSESCDVYSFGILLLEILTGRKPI----------EKLPGGVKRTIT 257
YLAPE + + + D +S G++L L+G P +++ G I
Sbjct: 307 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 366
Query: 258 E-WAEPLIVKGKFKEL------VDPKLR 278
E WAE V K +L VDPK R
Sbjct: 367 EVWAE---VSEKALDLVKKLLVVDPKAR 391
>pdb|2CN5|A Chain A, Crystal Structure Of Human Chk2 In Complex With Adp
pdb|2CN8|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Debromohymenialdisine
pdb|2WTC|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTD|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTI|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2WTJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XBJ|A Chain A, Crystal Structure Of Chk2 In Complex With An Inhibitor
pdb|2XM8|A Chain A, Co-Crystal Structure Of A Small Molecule Inhibitor Bound
To The Kinase Domain Of Chk2
pdb|2XM9|A Chain A, Structure Of A Small Molecule Inhibitor With The Kinase
Domain Of Chk2
pdb|4A9R|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9S|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9T|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
pdb|4A9U|A Chain A, Crystal Structure Of Human Chk2 In Complex With
Benzimidazole Carboxamide Inhibitor
Length = 329
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 57/273 (20%)
Query: 49 LGEGGFGSV---YWGRTSDGLQIAV--KKLKAMNSKAEMEFAV----EVEVLGRVRHKNL 99
LG G G V + +T + I + K+ A+ S E + A+ E+E+L ++ H +
Sbjct: 24 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 83
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------G 153
+ ++ + D IV + M L + G +R+K A
Sbjct: 84 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLA 132
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
+ YLH IIHRD+K NVLL S E + DFG +K++ G + + + GT
Sbjct: 133 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 187
Query: 211 YLAPEYAM---WGKVSESCDVYSFGILLLEILTGRKPI----------EKLPGGVKRTIT 257
YLAPE + + + D +S G++L L+G P +++ G I
Sbjct: 188 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 247
Query: 258 E-WAEPLIVKGKFKEL------VDPKLRGDFDE 283
E WAE V K +L VDPK R +E
Sbjct: 248 EVWAE---VSEKALDLVKKLLVVDPKARFTTEE 277
>pdb|2XK9|A Chain A, Structural Analysis Of Checkpoint Kinase 2 (Chk2) In
Complex With Inhibitor Pv1533
Length = 322
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 116/273 (42%), Gaps = 57/273 (20%)
Query: 49 LGEGGFGSV---YWGRTSDGLQIAV--KKLKAMNSKAEMEFAV----EVEVLGRVRHKNL 99
LG G G V + +T + I + K+ A+ S E + A+ E+E+L ++ H +
Sbjct: 17 LGSGACGEVKLAFERKTCKKVAIKIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 76
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------G 153
+ ++ + D IV + M L + G +R+K A
Sbjct: 77 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLA 125
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
+ YLH IIHRD+K NVLL S E + DFG +K++ G + + + GT
Sbjct: 126 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 180
Query: 211 YLAPEYAM---WGKVSESCDVYSFGILLLEILTGRKPI----------EKLPGGVKRTIT 257
YLAPE + + + D +S G++L L+G P +++ G I
Sbjct: 181 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 240
Query: 258 E-WAEPLIVKGKFKEL------VDPKLRGDFDE 283
E WAE V K +L VDPK R +E
Sbjct: 241 EVWAE---VSEKALDLVKKLLVVDPKARFTTEE 270
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 55.8 bits (133), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 67/279 (24%), Positives = 117/279 (41%), Gaps = 42/279 (15%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
KL E G ++ GR + + + V K++ +++ +F E L H N+L + G C
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 107 AG--TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ +MP SL + LH +D + +K A+ A G+ +LH + P
Sbjct: 77 QSPPAPHPTLITHWMPYGSLYNVLHE--GTNFVVDQSQAVKFALDMARGMAFLH-TLEPL 133
Query: 165 IIHRDIKASNVLLDSDFEPLV--ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
I + + +V++D D + AD F+ P + ++APE A+ K
Sbjct: 134 IPRHALNSRSVMIDEDMTARISMADVKFSFQSPGRMY--------APAWVAPE-ALQKKP 184
Query: 223 SE----SCDVYSFGILLLEILTGRKPIEKLPG---GVKRTITEWAEPLIVKGKFKELVDP 275
+ S D++SF +LL E++T P L G+K + E P I G + P
Sbjct: 185 EDTNRRSADMWSFAVLLWELVTREVPFADLSNMEIGMKVAL-EGLRPTIPPG-----ISP 238
Query: 276 KLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ + +C+ +P KRP +V L
Sbjct: 239 HVS------------KLMKICMNEDPAKRPKFDMIVPIL 265
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 27/230 (11%)
Query: 24 NNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWG-RTSDGLQIAVKKL-KAMNSKAE 81
+N + + T + +G G G V T G+ +AVKKL + ++
Sbjct: 7 DNQFYSVEVADSTFTVLKRYQQLKPIGSGAQGIVCAAFDTVLGINVAVKKLSRPFQNQTH 66
Query: 82 MEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLI-----VYDYM----PNLSLLSHLHGQ 131
+ A E+ +L V HKN++ L T Q+ + VY M NL + H+
Sbjct: 67 AKRAYRELVLLKCVNHKNIISLLN--VFTPQKTLEEFQDVYLVMELMDANLCQVIHM--- 121
Query: 132 YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFA 191
+LD +R + GI +LH + IIHRD+K SN+++ SD + DFG A
Sbjct: 122 -----ELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKILDFGLA 173
Query: 192 KLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTG 241
+ + M T T Y APE + + + D++S G ++ E++ G
Sbjct: 174 RT--ACTNFMMTPYVVTRYYRAPEVILGMGYAANVDIWSVGCIMGELVKG 221
>pdb|3I6W|A Chain A, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|B Chain B, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|C Chain C, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|D Chain D, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|E Chain E, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|F Chain F, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|G Chain G, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
pdb|3I6W|H Chain H, Structure And Activation Mechanism Of The Chk2 Dna-Damage
Checkpoint Kinase
Length = 443
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 114/268 (42%), Gaps = 57/268 (21%)
Query: 49 LGEGGFGSV---YWGRTSD--GLQIAVKKLKAMNSKAEMEFAV----EVEVLGRVRHKNL 99
LG G G V + +T ++I K+ A+ S E + A+ E+E+L ++ H +
Sbjct: 157 LGSGACGEVKLAFERKTCKKVAIRIISKRKFAIGSAREADPALNVETEIEILKKLNHPCI 216
Query: 100 LGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE------G 153
+ ++ + D IV + M L + G +R+K A
Sbjct: 217 IKIKNFFDAEDY-YIVLELMEGGELFDKVVGN----------KRLKEATCKLYFYQMLLA 265
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLG 210
+ YLH IIHRD+K NVLL S E + DFG +K++ G + + + GT
Sbjct: 266 VQYLHEN---GIIHRDLKPENVLLSSQEEDCLIKITDFGHSKIL--GETSLMRTLCGTPT 320
Query: 211 YLAPEYAM---WGKVSESCDVYSFGILLLEILTGRKPI----------EKLPGGVKRTIT 257
YLAPE + + + D +S G++L L+G P +++ G I
Sbjct: 321 YLAPEVLVSVGTAGYNRAVDCWSLGVILFICLSGYPPFSEHRTQVSLKDQITSGKYNFIP 380
Query: 258 E-WAEPLIVKGKFKEL------VDPKLR 278
E WAE V K +L VDPK R
Sbjct: 381 EVWAE---VSEKALDLVKKLLVVDPKAR 405
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 55.5 bits (132), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 17 LTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD---GLQIAVKKL 73
LT P + +R +E+H T+ ++G G FG V+ R D G Q AVKK+
Sbjct: 58 LTEKLKPVDYEYR----EEVHWMTH----QPRVGRGSFGEVH--RMKDKQTGFQCAVKKV 107
Query: 74 KAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYA 133
+ + E E+ + ++ L G I + + SL GQ
Sbjct: 108 RLEVFRVE-----ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-----GQLI 157
Query: 134 GEVQLDWKRRMKIAIGSA-EGILYLHHEVTPHIIHRDIKASNVLLDSD-FEPLVADFGFA 191
++ + R +G A EG+ YLH T I+H D+KA NVLL SD + DFG A
Sbjct: 158 KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 214
Query: 192 -KLIPEGV--SHMT-TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
L P+G+ S +T + GT ++APE M D++S ++L +L G P
Sbjct: 215 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 95/201 (47%), Gaps = 17/201 (8%)
Query: 49 LGEGGFGSV---YWGRTSDGLQIAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLR 103
+G G +GSV Y R ++AVKKL + S E+ +L ++H+N++GL
Sbjct: 36 VGSGAYGSVCSAYDARLRQ--KVAVKKLSRPFQSLIHARRTYRELRLLKHLKHENVIGLL 93
Query: 104 G-YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVT 162
+ T Y+ + + L+ + D + + G+ Y+H +
Sbjct: 94 DVFTPATSIEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQF-LVYQLLRGLKYIH---S 149
Query: 163 PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAM-WGK 221
IIHRD+K SNV ++ D E + DFG A+ E MT V T Y APE + W
Sbjct: 150 AGIIHRDLKPSNVAVNEDSELRILDFGLARQADE---EMTGYV-ATRWYRAPEIMLNWMH 205
Query: 222 VSESCDVYSFGILLLEILTGR 242
+++ D++S G ++ E+L G+
Sbjct: 206 YNQTVDIWSVGCIMAELLQGK 226
>pdb|3UC3|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.3
Length = 361
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/219 (27%), Positives = 95/219 (43%), Gaps = 26/219 (11%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGR--VRHKNLLGLRGYC 106
+G G FG R D L + +K + A ++ V+ E++ +RH N++ +
Sbjct: 28 IGSGNFGVARLMR--DKLTKELVAVKYIERGAAIDENVQREIINHRSLRHPNIVRFKEVI 85
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
I+ +Y L + AG D R + S G+ Y H + I
Sbjct: 86 LTPTHLAIIMEYASGGELYERICN--AGRFSEDEARFFFQQLLS--GVSYCH---SMQIC 138
Query: 167 HRDIKASNVLLDSDFEPL--VADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMW---- 219
HRD+K N LLD P + DFG++K V H + GT Y+APE +
Sbjct: 139 HRDLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLRQEYD 195
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTI 256
GK++ DV+S G+ L +L G P E + P ++TI
Sbjct: 196 GKIA---DVWSCGVTLYVMLVGAYPFEDPEEPRDYRKTI 231
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 74 KAMNSKAEMEFAV------------EVEVLGRV-RHKNLLGLRGYCAGTDQRLIVYDYMP 120
+ ++ ME+AV E+E+L R +H N++ L+ +V + M
Sbjct: 45 RCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 121 NLSLLSHLHGQYAGEVQLDWKRRMKIAIGS-AEGILYLHHEVTPHIIHRDIKASNVL-LD 178
LL + Q + +R + + + + YLH + ++HRD+K SN+L +D
Sbjct: 105 GGELLDKILRQ-----KFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVD 156
Query: 179 SDFEP---LVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILL 235
P + DFGFAK + + T T ++APE E CD++S GILL
Sbjct: 157 ESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 236 LEILTGRKPIEKLPGGVKRTI 256
+L G P P I
Sbjct: 216 YTMLAGYTPFANGPSDTPEEI 236
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 107
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 108 MELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXT 164
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 55.5 bits (132), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 128/291 (43%), Gaps = 47/291 (16%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKK-LKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCA 107
LG G G+V + + G +AVK+ L A ME + E H N++ R YC+
Sbjct: 23 LGYGSSGTVVFQGSFQGRPVAVKRMLIDFCDIALMEIKLLTE---SDDHPNVI--RYYCS 77
Query: 108 -GTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR---MKIAIGSAEGILYLHHEVTP 163
TD+ L + + NL+L + + + L ++ + + A G+ +LH +
Sbjct: 78 ETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHLH---SL 134
Query: 164 HIIHRDIKASNVLLDS-------------DFEPLVADFGFAKLIPEGVSHMTTRVK---G 207
IIHRD+K N+L+ + + L++DFG K + G + G
Sbjct: 135 KIIHRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNLNNPSG 194
Query: 208 TLGYLAPEYAMWG-------KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWA 260
T G+ APE +++ S D++S G + IL+ K P G K +
Sbjct: 195 TSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKH----PFGDKYS----R 246
Query: 261 EPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
E I++G F +D +++ D + + +A ++ + +P KRP +V+
Sbjct: 247 ESNIIRGIFS--LD-EMKCLHDRSLIAEATDLISQMIDHDPLKRPTAMKVL 294
>pdb|1J3H|A Chain A, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
pdb|1J3H|B Chain B, Crystal Structure Of Apoenzyme Camp-Dependent Protein
Kinase Catalytic Subunit
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLXGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|1APM|E Chain E, 2.0 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
A Peptide Inhibitor And Detergent
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 61/238 (25%), Positives = 99/238 (41%), Gaps = 29/238 (12%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLH 129
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 130 --GQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVAD 187
G++A +A+ +L + + +I+RD+K N+L+D V D
Sbjct: 134 RIGRFA---------EPHARFYAAQIVLTFEYLHSLDLIYRDLKPENLLIDQQGYIQVTD 184
Query: 188 FGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
FGFAK V T + GT YLAPE + +++ D ++ G+L+ E+ G P
Sbjct: 185 FGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/174 (25%), Positives = 81/174 (46%), Gaps = 21/174 (12%)
Query: 83 EFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSH------LHGQYAGEV 136
+F E++++ ++++ L G D+ I+Y+YM N S+L L Y +
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCFI 148
Query: 137 QLDWKRRMKIAIGSA-EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIP 195
+ + +K I S Y+H+E +I HRD+K SN+L+D + ++DFG ++ +
Sbjct: 149 PI---QVIKCIIKSVLNSFSYIHNE--KNICHRDVKPSNILMDKNGRVKLSDFGESEYM- 202
Query: 196 EGVSHMTTRVKGTLGYLAPEYAMWGKVSE----SCDVYSFGILLLEILTGRKPI 245
V +GT ++ PE+ + S D++S GI L + P
Sbjct: 203 --VDKKIKGSRGTYEFMPPEF--FSNESSYNGAKVDIWSLGICLYVMFYNVVPF 252
>pdb|3FHI|A Chain A, Crystal Structure Of A Complex Between The Catalytic And
Regulatory (Ri{alpha}) Subunits Of Pka
Length = 350
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLAGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/201 (26%), Positives = 86/201 (42%), Gaps = 27/201 (13%)
Query: 74 KAMNSKAEMEFAV------------EVEVLGRV-RHKNLLGLRGYCAGTDQRLIVYDYMP 120
+ ++ ME+AV E+E+L R +H N++ L+ +V + M
Sbjct: 45 RCVHKATNMEYAVKVIDKSKRDPSEEIEILLRYGQHPNIITLKDVYDDGKHVYLVTELMR 104
Query: 121 NLSLLSHLHGQYAGEVQLDWKRRMKIAIGS-AEGILYLHHEVTPHIIHRDIKASNVL-LD 178
LL + Q + +R + + + + YLH + ++HRD+K SN+L +D
Sbjct: 105 GGELLDKILRQ-----KFFSEREASFVLHTIGKTVEYLHSQ---GVVHRDLKPSNILYVD 156
Query: 179 SDFEP---LVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILL 235
P + DFGFAK + + T T ++APE E CD++S GILL
Sbjct: 157 ESGNPECLRICDFGFAKQLRAENGLLMTPCY-TANFVAPEVLKRQGYDEGCDIWSLGILL 215
Query: 236 LEILTGRKPIEKLPGGVKRTI 256
+L G P P I
Sbjct: 216 YTMLAGYTPFANGPSDTPEEI 236
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+++D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 57 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 116
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 117 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 172
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 173 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 227
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/208 (24%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 48 KLGEGGFGSVYWGRTSDGLQI-AVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRG 104
K+GEG +G+V+ + + +I A+K+++ + + + E+ +L ++HKN++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ +V+++ L G+ LD + +G+ + H +
Sbjct: 69 VLHSDKKLTLVFEFCD--QDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
++HRD+K N+L++ + E +ADFG A+ V + V TL Y P+ K+ S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLADFGLARAFGIPVRCYSAEV-VTLWYRPPDVLFGAKLYS 180
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGG 251
S D++S G + E+ +P+ PG
Sbjct: 181 TSIDMWSAGCIFAELANAARPL--FPGN 206
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 106/237 (44%), Gaps = 32/237 (13%)
Query: 17 LTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD---GLQIAVKKL 73
LT P + +R +E+H T+ ++G G FG V+ R D G Q AVKK+
Sbjct: 42 LTEKLKPVDYEYR----EEVHWMTH----QPRVGRGSFGEVH--RMKDKQTGFQCAVKKV 91
Query: 74 KAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYA 133
+ + E E+ + ++ L G I + + SL GQ
Sbjct: 92 RLEVFRVE-----ELVACAGLSSPRIVPLYGAVREGPWVNIFMELLEGGSL-----GQLI 141
Query: 134 GEVQLDWKRRMKIAIGSA-EGILYLHHEVTPHIIHRDIKASNVLLDSD-FEPLVADFGFA 191
++ + R +G A EG+ YLH T I+H D+KA NVLL SD + DFG A
Sbjct: 142 KQMGCLPEDRALYYLGQALEGLEYLH---TRRILHGDVKADNVLLSSDGSRAALCDFGHA 198
Query: 192 -KLIPEGV--SHMT-TRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKP 244
L P+G+ S +T + GT ++APE M D++S ++L +L G P
Sbjct: 199 LCLQPDGLGKSLLTGDYIPGTETHMAPEVVMGKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/177 (28%), Positives = 85/177 (48%), Gaps = 8/177 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 105
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 106 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 161
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 162 LDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 216
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 55.1 bits (131), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/211 (27%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E + V L+ L
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEHTLNEKRIQQAVNFPFLVKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVLEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D VADFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLLIDQQGYIKVADFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|1YHS|A Chain A, Crystal Structure Of Pim-1 Bound To Staurosporine
pdb|1YI3|A Chain A, Crystal Structure Of Pim-1 Bound To Ly294002
pdb|1YI4|A Chain A, Structure Of Pim-1 Bound To Adenosine
Length = 273
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVR--HKNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 100 LGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 127
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
+ ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 128 NX---GVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 181
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 222
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 223 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|3UIX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Small
Molecule Inhibitor
pdb|3UMX|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indol-3-Yl)methylene]-7-(Azepan-1-Ylmethyl)-6-
Hydroxybenzofuran- 3(2h)-One
pdb|4ENX|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
Inhibitor (2e,5z)-2-
(2-Chlorophenylimino)-5-(4-Hydroxy-3-
Nitrobenzylidene)thiazolidin-4- One
pdb|4ENY|A Chain A, Crystal Structure Of Pim-1 Kinase In Complex With
(2e,5z)-2-(2-
Chlorophenylimino)-5-(4-Hydroxy-3-
Methoxybenzylidene)thiazolidin-4- One
pdb|3UMW|A Chain A, Crystal Structure Of Pim1 Kinase In Complex With Inhibitor
(Z)-2-[(1h-
Indazol-3-Yl)methylene]-6-Methoxy-7-(Piperazin-1-
Ylmethyl)benzofuran- 3(2h)-One
Length = 298
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 132
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
+ ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 133 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 186
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 227
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 55.1 bits (131), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 118/287 (41%), Gaps = 41/287 (14%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ--------LDWKRRMKIAIGSA 151
L G C L ++ ++ +L ++L + V L + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQVA 154
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKGT 208
+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKIXDFGLARDIYKDPDYVRKGDARL--P 209
Query: 209 LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKG 267
L ++APE + DV+SFG+LL EI + G P GVK +
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK-----------IDE 254
Query: 268 KFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+F + R + + + C EP +RP E+V L
Sbjct: 255 EFXRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 98/207 (47%), Gaps = 20/207 (9%)
Query: 48 KLGEGGFGSVYWGRT-SDGLQIAVKKLK----AMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
+LG G F V + S G + A K LK + +AE+ + V L + + ++ L
Sbjct: 36 ELGRGKFAVVRQCISKSTGQEYAAKFLKKRRRGQDCRAEILHEIAVLELAKSCPR-VINL 94
Query: 103 RGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEV-QLDWKRRMKIAIGSAEGILYLHHEV 161
T + +++ +Y + S + A V + D R +K + EG+ YLH
Sbjct: 95 HEVYENTSEIILILEYAAGGEIFSLCLPELAEMVSENDVIRLIKQIL---EGVYYLHQN- 150
Query: 162 TPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
+I+H D+K N+LL S + PL + DFG ++ I G + + GT YLAPE
Sbjct: 151 --NIVHLDLKPQNILLSSIY-PLGDIKIVDFGMSRKI--GHACELREIMGTPEYLAPEIL 205
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKP 244
+ ++ + D+++ GI+ +LT P
Sbjct: 206 NYDPITTATDMWNIGIIAYMLLTHTSP 232
>pdb|2XJ0|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-4 From
Crystallographic Fragment Screen
Length = 301
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 147
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 148 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 201
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 242
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 243 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 83 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 137
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTEPCYTPYYVAPEVLGPEKY 194
Query: 223 SESCDVYSFGILLLEILTGRKP 244
+SCD++S G+++ +L G P
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPP 216
>pdb|3R00|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R01|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R02|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3R04|A Chain A, The Discovery Of Novel Benzofuran-2-Carboxylic Acids As
Potent Pim-1 Inhibitors
pdb|3VBQ|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBT|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBV|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBW|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBX|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VBY|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
pdb|3VC4|A Chain A, Exploitation Of Hydrogen Bonding Constraints And Flat
Hydrophobic Energy Landscapes In Pim-1 Kinase Needle
Screening And Inhibitor Design
Length = 299
Score = 54.7 bits (130), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 100 LGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 132
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
+ ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 133 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 186
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 227
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|3C4E|A Chain A, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|B Chain B, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|C Chain C, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
pdb|3C4E|D Chain D, Pim-1 Kinase Domain In Complex With 3-Aminophenyl-7-
Azaindole
Length = 273
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 100 LGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 127
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 128 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 181
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 222
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 223 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 254
>pdb|4DTK|A Chain A, Novel And Selective Pan-Pim Kinase Inhibitor
Length = 276
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 15 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 74
Query: 100 LGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + A +
Sbjct: 75 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA-----VR 127
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 128 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 184
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 185 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 225
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 226 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 257
>pdb|4ALV|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
pdb|4ALW|A Chain A, Benzofuropyrimidinone Inhibitors Of Pim-1
Length = 328
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 174
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 175 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 228
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 269
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 270 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|3A99|A Chain A, Structure Of Pim-1 Kinase Crystallized In The Presence Of
P27kip1 Carboxy-Terminal Peptide
Length = 320
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 51 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 110
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 111 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 166
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 167 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 220
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 221 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 261
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 262 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 293
>pdb|1XQZ|A Chain A, Crystal Structure Of Hpim-1 Kinase At 2.1 A Resolution
pdb|1XR1|A Chain A, Crystal Structure Of Hpim-1 Kinase In Complex With Amp-Pnp
At 2.1 A Resolution
Length = 300
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 146
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 147 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 200
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 241
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 242 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+++D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 68 IAVKKL-KAMNSKAEMEFAVEVEVLGR-VRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A VL + V HKN++ L T Q+ + + ++ L+
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 100
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 101 MELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXT 157
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++
Sbjct: 158 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 212
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 87/177 (49%), Gaps = 14/177 (7%)
Query: 68 IAVKKL-KAMNSKAEMEFAVEVEVLGR-VRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A VL + V HKN++ L T Q+ + + ++ L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 107
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 108 MELMDANLXQVIQMELDHERMSYLLYQMLXGIKHLH---SAGIIHRDLKPSNIVVKSDXT 164
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+++D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 54.7 bits (130), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 99 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 153
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 154 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 210
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
+SCD++S G+++ +L G P
Sbjct: 211 DKSCDMWSLGVIMYILLCGYPPF 233
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 72/289 (24%), Positives = 118/289 (40%), Gaps = 43/289 (14%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ----------LDWKRRMKIAIG 149
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSFQ 156
Query: 150 SAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVK 206
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 157 VAKGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL- 212
Query: 207 GTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIV 265
L ++APE + DV+SFG+LL EI + G P GVK +
Sbjct: 213 -PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK-----------I 256
Query: 266 KGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+F + R + + + C EP +RP E+V L
Sbjct: 257 DEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1YWV|A Chain A, Crystal Structures Of Proto-Oncogene Kinase Pim1: A Target
Of Aberrant Somatic Hypermutations In Diffuse Large Cell
Lymphoma
pdb|1YXT|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amppnp
pdb|1YXU|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|B Chain B, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|C Chain C, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXU|D Chain D, Crystal Structure Of Kinase Pim1 In Complex With Amp
pdb|1YXV|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
3,4-Dihydroxy-1- Methylquinolin-2(1h)-One
pdb|1YXX|A Chain A, Crystal Structure Of Kinase Pim1 In Complex With
(3e)-3-[(4- Hydroxyphenyl)imino]-1h-Indol-2(3h)-One
pdb|2O3P|A Chain A, Crystal Structure Of Pim1 With Quercetin
pdb|2O63|A Chain A, Crystal Structure Of Pim1 With Myricetin
pdb|2O64|A Chain A, Crystal Structure Of Pim1 With Quercetagetin
pdb|2O65|A Chain A, Crystal Structure Of Pim1 With Pentahydroxyflavone
Length = 293
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 16 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 75
Query: 100 LGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 76 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 131
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
+ ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 132 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 185
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 186 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 226
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 227 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 258
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+++D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1XWS|A Chain A, Crystal Structure Of The Human Pim1 Kinase Domain
Length = 313
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 159
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 213
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 254
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 255 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 286
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 48 KLGEGGFGSVYW-GRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
+LG G FG V+ + G A K + + + E++ + +RH L+ L
Sbjct: 58 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 117
Query: 107 AGTDQRLIVYDYMPNLSLLSHL---HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ +++Y++M L + H + + + +++ R++ +G+ ++H
Sbjct: 118 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV------CKGLCHMHEN--- 168
Query: 164 HIIHRDIKASNVLLDS--DFEPLVADFGF-AKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
+ +H D+K N++ + E + DFG A L P+ +TT GT + APE A
Sbjct: 169 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGK 225
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
V D++S G+L +L+G P
Sbjct: 226 PVGYYTDMWSVGVLSYILLSGLSPF 250
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 91 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 145
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 146 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 202
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
+SCD++S G+++ +L G P
Sbjct: 203 DKSCDMWSLGVIMYILLCGYPPF 225
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 83 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 137
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 138 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 194
Query: 223 SESCDVYSFGILLLEILTGRKP 244
+SCD++S G+++ +L G P
Sbjct: 195 DKSCDMWSLGVIMYILLCGYPP 216
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 54.7 bits (130), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 89 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 143
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 144 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 200
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
+SCD++S G+++ +L G P
Sbjct: 201 DKSCDMWSLGVIMYILLCGYPPF 223
>pdb|3UDB|A Chain A, Crystal Structure Of Snrk2.6
pdb|3UDB|B Chain B, Crystal Structure Of Snrk2.6
pdb|3UDB|C Chain C, Crystal Structure Of Snrk2.6
pdb|3UDB|D Chain D, Crystal Structure Of Snrk2.6
pdb|3UDB|E Chain E, Crystal Structure Of Snrk2.6
pdb|3UDB|F Chain F, Crystal Structure Of Snrk2.6
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/217 (27%), Positives = 88/217 (40%), Gaps = 22/217 (10%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G G FG R ++ K K + E+ +RH N++ +
Sbjct: 27 IGAGNFGVARLMRDKQANELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
IV +Y L + AG D R + S G+ Y H + HR
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLIS--GVSYAH---AMQVAHR 139
Query: 169 DIKASNVLLDSDFEPL--VADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMW----GK 221
D+K N LLD P +ADFG++K V H + GT Y+APE + GK
Sbjct: 140 DLKLENTLLDGSPAPRLKIADFGYSK---ASVLHSQPKSAVGTPAYIAPEVLLKKEYDGK 196
Query: 222 VSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTI 256
V+ DV+S G+ L +L G P E + P ++TI
Sbjct: 197 VA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3JXW|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JY0|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
pdb|3JYA|A Chain A, Discovery Of 3h-Benzo[4,5]thieno[3,2-D]pyrimidin-4-Ones As
Potent, Highly Selective And Orally Bioavailable Pim
Kinases Inhibitors
Length = 294
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 120/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 17 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 76
Query: 100 LGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 77 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 132
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
+ ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 133 N---CGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 186
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 187 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 227
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 228 ----FRQRVSSECQHLIRWCLALRPSDRPTFEEIQN 259
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 94/205 (45%), Gaps = 19/205 (9%)
Query: 48 KLGEGGFGSVYW-GRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
+LG G FG V+ + G A K + + + E++ + +RH L+ L
Sbjct: 164 ELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQTMSVLRHPTLVNLHDAF 223
Query: 107 AGTDQRLIVYDYMPNLSLLSHL---HGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
++ +++Y++M L + H + + + +++ R++ +G+ ++H
Sbjct: 224 EDDNEMVMIYEFMSGGELFEKVADEHNKMSEDEAVEYMRQV------CKGLCHMHEN--- 274
Query: 164 HIIHRDIKASNVLLDS--DFEPLVADFGF-AKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
+ +H D+K N++ + E + DFG A L P+ +TT GT + APE A
Sbjct: 275 NYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQSVKVTT---GTAEFAAPEVAEGK 331
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
V D++S G+L +L+G P
Sbjct: 332 PVGYYTDMWSVGVLSYILLSGLSPF 356
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 90 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 144
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 145 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 201
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
+SCD++S G+++ +L G P
Sbjct: 202 DKSCDMWSLGVIMYILLCGYPPF 224
>pdb|3F2A|A Chain A, Crystal Structure Of Human Pim-1 In Complex With Dappa
Length = 300
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 31 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 90
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 91 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 146
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 147 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 200
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 201 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 241
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 242 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQN 273
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 135 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 189
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 190 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 246
Query: 223 SESCDVYSFGILLLEILTGRKP 244
+SCD++S G+++ +L G P
Sbjct: 247 DKSCDMWSLGVIMYILLCGYPP 268
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 84 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 138
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 139 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 195
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
+SCD++S G+++ +L G P
Sbjct: 196 DKSCDMWSLGVIMYILLCGYPPF 218
>pdb|2XIY|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-2 From
Crystallographic Fragment Screen
pdb|2XIZ|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-3 From
Crystallographic Fragment Screen
pdb|2XJ1|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inibitor
pdb|2XJ2|A Chain A, Protein Kinase Pim-1 In Complex With Small Molecule
Inhibitor
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 147
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 148 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 201
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 242
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 243 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQN 274
>pdb|2ERZ|E Chain E, Crystal Structure Of C-amp Dependent Kinase (pka) Bound To
Hydroxyfasudil
Length = 351
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 25 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 74
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 75 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 134
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 135 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 177
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 178 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 233
Query: 240 TGRKPI 245
G P
Sbjct: 234 AGYPPF 239
>pdb|3PVB|A Chain A, Crystal Structure Of (73-244)ria:c Holoenzyme Of
Camp-Dependent Protein Kinase
Length = 345
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 19 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 68
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 69 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 128
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 129 RIGRFXEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 171
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 172 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 227
Query: 240 TGRKPI 245
G P
Sbjct: 228 AGYPPF 233
>pdb|4A7C|A Chain A, Crystal Structure Of Pim1 Kinase With Etp46546
Length = 308
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 118/276 (42%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 39 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 98
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + A +
Sbjct: 99 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA-----VR 151
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 152 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 208
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 209 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 249
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 250 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQN 281
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 145
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 146 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 202
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 203 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 261 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 305
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 129 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 183
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 184 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 240
Query: 223 SESCDVYSFGILLLEILTGRKP 244
+SCD++S G+++ +L G P
Sbjct: 241 DKSCDMWSLGVIMYILLCGYPP 262
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/306 (23%), Positives = 135/306 (44%), Gaps = 38/306 (12%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKL---KAMNSKAEMEFAVEVEVLGRVRHKN 98
+++ +G G FG V+ + + ++A+KK+ K ++ E++++ V+H N
Sbjct: 41 AYTNCKVIGNGSFGVVFQAKLVESDEVAIKKVLQDKRFKNR-------ELQIMRIVKHPN 93
Query: 99 LLGLRGYCAGTDQRL------IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAE 152
++ L+ + + +V +Y+P + H YA Q +K+ +
Sbjct: 94 VVDLKAFFYSNGDKKDEVFLNLVLEYVPETVYRASRH--YAKLKQTMPMLLIKLYMYQLL 151
Query: 153 GILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEG---VSHMTTRVKGT 208
L H + I HRDIK N+LLD L + DFG AK++ G VS + +R
Sbjct: 152 RSLAYIHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRY--- 206
Query: 209 LGYLAPEYAMWG-KVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKG 267
Y APE + + D++S G ++ E++ G +P+ PG + I + E + V G
Sbjct: 207 --YRAPELIFGATNYTTNIDIWSTGCVMAELMQG-QPL--FPG--ESGIDQLVEIIKVLG 259
Query: 268 KFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTLTGYDPRGKVMQTR 327
+ ++ E++ Q I P P+ ++++ L Y P ++ T
Sbjct: 260 TPSREQIKTMNPNYMEHKFPQ-IRPHPFSKVFRPRTPPDAIDLISRLLEYTPSARL--TA 316
Query: 328 IETLAY 333
IE L +
Sbjct: 317 IEALCH 322
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 107
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXT 164
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 165 LKILDFGLAR--TAGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 223 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 267
>pdb|2QCS|A Chain A, A Complex Structure Between The Catalytic And Regulatory
Subunit Of Protein Kinase A That Represents The
Inhibited State
pdb|2CPK|E Chain E, Crystal Structure Of The Catalytic Subunit Of Cyclic
Adenosine Monophosphate-Dependent Protein Kinase
pdb|4DG0|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20 And
Amp-Pnp
pdb|4DG2|E Chain E, Crystal Structure Of Myristoylated Wt Catalytic Subunit Of
Camp- Dependent Protein Kinase In Complex With Sp20
pdb|4DH1|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With Low Mg2+, Atp And Ip20
pdb|4DH3|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Atp And Ip20
pdb|4DH5|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Adp,
Phosphate, And Ip20
pdb|4DH7|A Chain A, Low Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20'
pdb|4DH8|A Chain A, Room Temperature X-ray Structure Of Camp Dependent Protein
Kinase A Catalytic Subunit With High Mg2+, Amp-pnp And
Ip20
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|1BKX|A Chain A, A Binary Complex Of The Catalytic Subunit Of
Camp-Dependent Protein Kinase And Adenosine Further
Defines Conformational Flexibility
pdb|1BX6|A Chain A, Crystal Structure Of The Potent Natural Product Inhibitor
Balanol In Complex With The Catalytic Subunit Of Camp-
Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 12/142 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 85 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 139
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 223 SESCDVYSFGILLLEILTGRKP 244
+SCD++S G+++ +L G P
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPP 218
>pdb|2OBJ|A Chain A, Crystal Structure Of Human Pim-1 Kinase In Complex With
Inhibitor
pdb|3BGP|A Chain A, Human Pim-1 Complexed With A Benzoisoxazole Inhibitor Vx1
pdb|3BGQ|A Chain A, Human Pim-1 Kinase In Complex With An Triazolo Pyridazine
Inhibitor Vx2
pdb|3BGZ|A Chain A, Human Pim-1 Kinase In Complex With Diphenyl Indole
Inhibitor Vx3
Length = 333
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 64 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 123
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 124 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 179
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 180 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 233
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 234 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 274
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 275 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQN 306
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/290 (24%), Positives = 118/290 (40%), Gaps = 44/290 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 36 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 95
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ-----------LDWKRRMKIAI 148
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 96 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYSF 155
Query: 149 GSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRV 205
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 156 QVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 206 KGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLI 264
L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 213 --PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK----------- 255
Query: 265 VKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 256 IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|1JBP|E Chain E, Crystal Structure Of The Catalytic Subunit Of Camp-
Dependent Protein Kinase Complexed With A Substrate
Peptide, Adp And Detergent
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKXVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 107
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 108 MELMDANLXQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDXT 164
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 223 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 267
>pdb|1FMO|E Chain E, Crystal Structure Of A Polyhistidine-Tagged Recombinant
Catalytic Subunit Of Camp-Dependent Protein Kinase
Complexed With The Peptide Inhibitor Pki(5-24) And
Adenosine
pdb|1JLU|E Chain E, Crystal Structure Of The Catalytic Subunit Of
Camp-dependent Protein Kinase Complexed With A
Phosphorylated Substrate Peptide And Detergent
pdb|1RE8|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 2
pdb|1REJ|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 1
pdb|1REK|A Chain A, Crystal Structure Of Camp-Dependent Protein Kinase
Complexed With Balanol Analog 8
pdb|2QVS|E Chain E, Crystal Structure Of Type Iia Holoenzyme Of Camp-Dependent
Protein Kinase
pdb|3FJQ|E Chain E, Crystal Structure Of Camp-Dependent Protein Kinase
Catalytic Subunit Alpha In Complex With Peptide
Inhibitor Pki Alpha (6-25)
pdb|3IDB|A Chain A, Crystal Structure Of (108-268)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3IDC|A Chain A, Crystal Structure Of (102-265)riib:c Holoenzyme Of Camp-
Dependent Protein Kinase
pdb|3O7L|D Chain D, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
pdb|3OW3|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|1ATP|E Chain E, 2.2 Angstrom Refined Crystal Structure Of The Catalytic
Subunit Of Camp-Dependent Protein Kinase Complexed With
Mnatp And A Peptide Inhibitor
pdb|4DIN|A Chain A, Novel Localization And Quaternary Structure Of The Pka Ri
Beta Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|3QAL|E Chain E, Crystal Structure Of Arg280ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|2QUR|A Chain A, Crystal Structure Of F327aK285P MUTANT OF CAMP-Dependent
Protein Kinase
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 67/143 (46%), Gaps = 12/143 (8%)
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
AG LIV + + L S + Q G+ + +I E I YLH + +I
Sbjct: 85 AGRKCLLIVMECLDGGELFSRI--QDRGDQAFTEREASEIMKSIGEAIQYLH---SINIA 139
Query: 167 HRDIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKV 222
HRD+K N+L S + DFGFAK E SH + T T Y+APE K
Sbjct: 140 HRDVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKY 196
Query: 223 SESCDVYSFGILLLEILTGRKPI 245
+SCD++S G+++ +L G P
Sbjct: 197 DKSCDMWSLGVIMYILLCGYPPF 219
>pdb|2XIX|A Chain A, Protein Kinase Pim-1 In Complex With Fragment-1 From
Crystallographic Fragment Screen
Length = 301
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 32 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 91
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 92 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 147
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 148 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 201
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 202 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 242
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 243 ----FRQRVSXECQHLIRWCLALRPXDRPTFEEIQN 274
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 90 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 145
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 146 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 202
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 203 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 260
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 261 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 305
>pdb|3DCV|A Chain A, Crystal Structure Of Human Pim1 Kinase Complexed With
4-(4-
Hydroxy-3-Methyl-Phenyl)-6-Phenylpyrimidin-2(1h)-One
pdb|3T9I|A Chain A, Pim1 Complexed With A Novel 3,6-Disubstituted Indole At
2.6 Ang Resolution
Length = 328
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/276 (25%), Positives = 119/276 (43%), Gaps = 45/276 (16%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 59 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 118
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 119 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 174
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 175 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 228
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPK 276
+ + S V+S GILL +++ G P E + I++G+
Sbjct: 229 RYHRYHGRSAAVWSLGILLYDMVCGDIPFEH-------------DEEIIRGQVF------ 269
Query: 277 LRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
F + + ++ C+ P RP +E+ N
Sbjct: 270 ----FRQRVSXECQHLIRWCLALRPSDRPTFEEIQN 301
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 45 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 94
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 95 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 154
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 155 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 197
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 198 QGYIQVTDFGFAK----RVKGATWTLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 240 TGRKPI 245
G P
Sbjct: 254 AGYPPF 259
>pdb|4DG3|E Chain E, Crystal Structure Of R336a Mutant Of Camp-dependent
Protein Kinase With Unphosphorylated Turn Motif
Length = 371
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 45 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 94
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 95 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 154
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 155 RIGRFXEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 197
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 198 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 253
Query: 240 TGRKPI 245
G P
Sbjct: 254 AGYPPF 259
>pdb|3UJG|A Chain A, Crystal Structure Of Snrk2.6 In Complex With Hab1
Length = 361
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 87/217 (40%), Gaps = 22/217 (10%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G G FG R ++ K K + E+ +RH N++ +
Sbjct: 26 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 85
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
IV +Y L + AG D R + S G+ Y H + HR
Sbjct: 86 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLIS--GVSYCH---AMQVCHR 138
Query: 169 DIKASNVLLDSDFEPL--VADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMW----GK 221
D+K N LLD P + DFG++K V H + GT Y+APE + GK
Sbjct: 139 DLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 195
Query: 222 VSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTI 256
V+ DV+S G+ L +L G P E + P ++TI
Sbjct: 196 VA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 229
>pdb|1L3R|E Chain E, Crystal Structure Of A Transition State Mimic Of The
Catalytic Subunit Of Camp-Dependent Protein Kinase
pdb|3TNP|C Chain C, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNP|F Chain F, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
pdb|3TNQ|B Chain B, Structure And Allostery Of The Pka Riib Tetrameric
Holoenzyme
Length = 350
Score = 54.3 bits (129), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFXEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 72/287 (25%), Positives = 118/287 (41%), Gaps = 41/287 (14%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ--------LDWKRRMKIAIGSA 151
L G C L ++ ++ +L ++L + V L + + + A
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQVA 154
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKGT 208
+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 155 KGMEFL---ASRKXIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL--P 209
Query: 209 LGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKG 267
L ++APE + DV+SFG+LL EI + G P GVK +
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK-----------IDE 254
Query: 268 KFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+F + R + + + C EP +RP E+V L
Sbjct: 255 EFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 45 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 100
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 101 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 157
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 158 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 215
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 216 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 260
>pdb|2GU8|A Chain A, Discovery Of 2-pyrimidyl-5-amidothiophenes As Novel And
Potent Inhibitors For Akt: Synthesis And Sar Studies
Length = 337
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 11 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 60
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 61 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 120
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 121 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDE 163
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 164 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYEMA 219
Query: 240 TGRKPI 245
G P
Sbjct: 220 AGYPPF 225
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 107
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 164
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 222
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 223 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 267
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 107
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 108 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 164
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++
Sbjct: 165 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 219
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 108
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 109 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 165
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 166 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 223
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 224 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 268
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 101
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 102 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 158
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 159 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 217 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 261
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+++D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFXEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+++D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/206 (26%), Positives = 87/206 (42%), Gaps = 12/206 (5%)
Query: 49 LGEGGFGSVY-WGRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G +G R SDG + K+L +M + EV +L ++H N++ R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--RYY 71
Query: 106 CAGTDQR----LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
D+ IV +Y L S + LD + +++ + H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 162 T--PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
++HRD+K +NV LD + DFG A+++ S T V GT Y++PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKTFV-GTPYYMSPEQMNR 190
Query: 220 GKVSESCDVYSFGILLLEILTGRKPI 245
+E D++S G LL E+ P
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 101 GLRGYCAGTDQRLIVY-DYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L+V ++ +L ++L + V L + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 246
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 53.9 bits (128), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 53 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 108
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 109 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 165
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++
Sbjct: 166 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 220
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/177 (28%), Positives = 88/177 (49%), Gaps = 14/177 (7%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 51 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 106
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 107 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 163
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++
Sbjct: 164 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMV 218
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/231 (27%), Positives = 112/231 (48%), Gaps = 24/231 (10%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++ L T Q+ + + ++ L+
Sbjct: 46 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIISLLN--VFTPQKTL--EEFQDVYLV 101
Query: 126 SHLHGQYAGEV---QLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFE 182
L +V +LD +R + GI +LH + IIHRD+K SN+++ SD
Sbjct: 102 MELMDANLCQVIQMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCT 158
Query: 183 PLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
+ DFG A+ G S M T T Y APE + E+ D++S G ++ E++ +
Sbjct: 159 LKILDFGLART--AGTSFMMTPYVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVRHK 216
Query: 243 KPIEKLPGGVKRTITEWAEPLIVKG----KFKELVDPKLRGDFDENQLKQA 289
PG + I +W + + G +F + + P +R ++ EN+ K A
Sbjct: 217 I---LFPG--RDYIDQWNKVIEQLGTPCPEFMKKLQPTVR-NYVENRPKYA 261
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 88/211 (41%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L L
Sbjct: 50 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKLEF 109
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y P + SHL H + YA ++ L ++
Sbjct: 110 SFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 156
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+++D V DFGFAK V T + GT YLAP
Sbjct: 157 -YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGFAK----RVKGRTWXLCGTPEYLAP 208
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 209 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 239
>pdb|2BIL|B Chain B, The Human Protein Kinase Pim1 In Complex With Its
Consensus Peptide Pimtide
pdb|2BZJ|A Chain A, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru3
pdb|2BZK|B Chain B, Crystal Structure Of The Human Pim1 In Complex With Amppnp
And Pimtide
pdb|2C3I|B Chain B, Crystal Structure Of Human Pim1 In Complex With
Imidazopyridazin I
pdb|2BZH|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2OI4|X Chain X, Crystal Structure Of Human Pim1 In Complex With
Fluorinated Ruthenium Pyridocarbazole
pdb|3BWF|A Chain A, Crystal Structure Of The Human Pim1 In Complex With An
Osmium Compound
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 159
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 213
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3UC4|A Chain A, The Crystal Structure Of Snf1-Related Kinase 2.6
pdb|3UC4|B Chain B, The Crystal Structure Of Snf1-Related Kinase 2.6
Length = 362
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/217 (27%), Positives = 86/217 (39%), Gaps = 22/217 (10%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G G FG R ++ K K E+ +RH N++ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIAANVKREIINHRSLRHPNIVRFKEVILT 86
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
IV +Y L + AG D R + S G+ Y H + HR
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLIS--GVSYCH---AMQVCHR 139
Query: 169 DIKASNVLLDSDFEPL--VADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMW----GK 221
D+K N LLD P + DFG++K V H + GT Y+APE + GK
Sbjct: 140 DLKLENTLLDGSPAPRLKICDFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 222 VSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTI 256
V+ DV+S G+ L +L G P E + P ++TI
Sbjct: 197 VA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3CY3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And
The Jnk Inhibitor V
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 160
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 214
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 86 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 246
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3MA3|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Naphtho-Difuran Ligand
Length = 313
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 160
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 214
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|3CXW|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand I
pdb|3CY2|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Beta Carboline Ligand Ii
Length = 314
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 160
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 214
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|2J2I|B Chain B, Crystal Structure Of The Humab Pim1 In Complex With
Ly333531
Length = 312
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 159
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 213
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|2BIK|B Chain B, Human Pim1 Phosphorylated On Ser261
pdb|2BZI|B Chain B, Crystal Structure Of The Human Pim1 In Complex With A
Ruthenium Organometallic Ligand Ru2
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 44 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 103
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 104 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 159
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 160 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 213
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 214 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 243
>pdb|3JPV|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Pyrrolo[2,3- A]carbazole Ligand
pdb|3QF9|A Chain A, Crystal Structure Of Human Proto-Oncogene Serine Threonine
Kinase (Pim1) In Complex With A Consensus Peptide And A
Furan- Thiazolidinedione Ligand
pdb|4GW8|A Chain A, Human Proto-Oncogene Serine Threonine Kinase (Pim1) In
Complex With A Consensus Peptide And Leucettine L41
Length = 313
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 99/210 (47%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 45 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 104
Query: 100 LGLRGYCAGTDQRLIVYDYM-PNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + E + + H
Sbjct: 105 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQV--LEAVRHCH 160
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 161 ---NCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 214
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 215 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 244
>pdb|4AS0|A Chain A, Cyclometalated Phthalimides As Protein Kinase Inhibitors
Length = 273
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 98/210 (46%), Gaps = 22/210 (10%)
Query: 49 LGEGGFGSVYWG-RTSDGLQIAVKKLKA--MNSKAEM----EFAVEVEVLGRVRH--KNL 99
LG GGFGSVY G R SD L +A+K ++ ++ E+ +EV +L +V +
Sbjct: 12 LGSGGFGSVYSGIRVSDNLPVAIKHVEKDRISDWGELPNGTRVPMEVVLLKKVSSGFSGV 71
Query: 100 LGLRGYCAGTDQRLIVYDY-MPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLH 158
+ L + D +++ + P L + + G +Q + R + A +
Sbjct: 72 IRLLDWFERPDSFVLILERPEPVQDLFDFITER--GALQEELARSFFWQVLEA-----VR 124
Query: 159 HEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
H ++HRDIK N+L+D + L + DFG L+ + V T GT Y PE+
Sbjct: 125 HCHNCGVLHRDIKDENILIDLNRGELKLIDFGSGALLKDTV---YTDFDGTRVYSPPEWI 181
Query: 218 MWGKV-SESCDVYSFGILLLEILTGRKPIE 246
+ + S V+S GILL +++ G P E
Sbjct: 182 RYHRYHGRSAAVWSLGILLYDMVCGDIPFE 211
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 255
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 94/214 (43%), Gaps = 25/214 (11%)
Query: 49 LGEGGFGSVYWGRT-SDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVR-HKNLLGLRGYC 106
LGEG + V + +G + AVK ++ + EVE L + + +KN+L L +
Sbjct: 21 LGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQGNKNILELIEFF 80
Query: 107 AGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHII 166
+ +V++ + S+L+H+ Q + + ++ A + +LH T I
Sbjct: 81 EDDTRFYLVFEKLQGGSILAHIQKQK----HFNEREASRVVRDVAAALDFLH---TKGIA 133
Query: 167 HRDIKASNVLLDS--DFEPL-VADFGFA-------KLIPEGVSHMTTRVKGTLGYLAPEY 216
HRD+K N+L +S P+ + DF P +TT G+ Y+APE
Sbjct: 134 HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC-GSAEYMAPEV 192
Query: 217 A-----MWGKVSESCDVYSFGILLLEILTGRKPI 245
+ CD++S G++L +L+G P
Sbjct: 193 VEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPPF 226
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 255
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 101 GLRGYCAGTDQRLIVY-DYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L+V ++ +L ++L + V L + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 246
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 53.5 bits (127), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 95/200 (47%), Gaps = 13/200 (6%)
Query: 47 NKLGEGGFGSVYWGRT--SDGLQIAVKKLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLR 103
+KLGEG + +VY G++ +D L +A+K+++ + + A+ EV +L ++H N++ L
Sbjct: 8 DKLGEGTYATVYKGKSKLTDNL-VALKEIRLEHEEGAPCTAIREVSLLKDLKHANIVTLH 66
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+V++Y+ + L +L G + ++ G+ Y H +
Sbjct: 67 DIIHTEKSLTLVFEYL-DKDLKQYLDD--CGNI-INMHNVKLFLFQLLRGLAYCHRQ--- 119
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG-KV 222
++HRD+K N+L++ E +ADFG A+ V TL Y P+ +
Sbjct: 120 KVLHRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVV-TLWYRPPDILLGSTDY 178
Query: 223 SESCDVYSFGILLLEILTGR 242
S D++ G + E+ TGR
Sbjct: 179 STQIDMWGVGCIFYEMATGR 198
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 87/201 (43%), Gaps = 28/201 (13%)
Query: 65 GLQIAVKKLKAMNSKAEMEFAVE-VEVLGRVRHKNLLGLRG-YC--------------AG 108
GL I K L+ N + + +FA++ ++ + R + L R C AG
Sbjct: 71 GLGINGKVLQIFNKRTQEKFALKXLQDCPKARREVELHWRASQCPHIVRIVDVYENLYAG 130
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
LIV + + L S + Q G+ + +I E I YLH + +I HR
Sbjct: 131 RKCLLIVXECLDGGELFSRI--QDRGDQAFTEREASEIXKSIGEAIQYLH---SINIAHR 185
Query: 169 DIKASNVLLDSDFEPLV---ADFGFAKLIPEGVSHMT-TRVKGTLGYLAPEYAMWGKVSE 224
D+K N+L S + DFGFAK E SH + T T Y+APE K +
Sbjct: 186 DVKPENLLYTSKRPNAILKLTDFGFAK---ETTSHNSLTTPCYTPYYVAPEVLGPEKYDK 242
Query: 225 SCDVYSFGILLLEILTGRKPI 245
SCD +S G++ +L G P
Sbjct: 243 SCDXWSLGVIXYILLCGYPPF 263
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 73/291 (25%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 26 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 85
Query: 101 GLRGYCAGTDQRLIVY-DYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L+V ++ +L ++L + V L + + +
Sbjct: 86 NLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 145
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 146 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 202
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 203 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 246
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 247 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 296
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 53.1 bits (126), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 37 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 96
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 97 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICYS 156
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 157 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 214 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 257
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 258 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 307
>pdb|1SYK|A Chain A, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
pdb|1SYK|B Chain B, Crystal Structure Of E230q Mutant Of Camp-Dependent
Protein Kinase Reveals Unexpected Apoenzyme Conformation
Length = 350
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ ++
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIILSKGYNKAVDWWALGVLIYQMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 35 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 94
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 95 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 154
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 155 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 211
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 212 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 255
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 256 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 305
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 53.1 bits (126), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 72/291 (24%), Positives = 118/291 (40%), Gaps = 45/291 (15%)
Query: 49 LGEGGFGSVYWG------RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRV-RHKNLL 100
LG G FG V +T+ +AVK LK + +E E+++L + H N++
Sbjct: 72 LGRGAFGQVIEADAFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNVV 131
Query: 101 GLRGYCAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQ------------LDWKRRMKIA 147
L G C L ++ ++ +L ++L + V L + + +
Sbjct: 132 NLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICYS 191
Query: 148 IGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTR 204
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R
Sbjct: 192 FQVAKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 205 VKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPL 263
+ L ++APE + DV+SFG+LL EI + G P GVK
Sbjct: 249 L--PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK---------- 292
Query: 264 IVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+ +F + R + + + C EP +RP E+V L
Sbjct: 293 -IDEEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 342
>pdb|3O7L|B Chain B, Crystal Structure Of Phospholamban (1-19):pka
C-Subunit:amp-Pnp:mg2+ Complex
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 101/246 (41%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+++D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLIIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPEIIISKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
DFG A+ G S M T Y APE + E+ D++S G ++ E++ +
Sbjct: 168 LDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDIWSVGCIMGEMVCHK 222
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 52.8 bits (125), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 58/211 (27%), Positives = 89/211 (42%), Gaps = 35/211 (16%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
LG G FG V + + G A+K K K + K E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEF 108
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEGI 154
+V +Y+ + SHL H + YA ++ L ++
Sbjct: 109 SFKDNSNLYMVMEYVAGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------- 155
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAP 214
YLH + +I+RD+K N+L+D V DFGFAK V T + GT YLAP
Sbjct: 156 -YLH---SLDLIYRDLKPENLLIDQQGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAP 207
Query: 215 EYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
E + +++ D ++ G+L+ E+ G P
Sbjct: 208 EIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 52.8 bits (125), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 99/208 (47%), Gaps = 14/208 (6%)
Query: 48 KLGEGGFGSVYWGRTSDGLQI-AVKKLKAMNSKAEMEFAV--EVEVLGRVRHKNLLGLRG 104
K+GEG +G+V+ + + +I A+K+++ + + + E+ +L ++HKN++ L
Sbjct: 9 KIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALREICLLKELKHKNIVRLHD 68
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
+ +V+++ L G+ LD + +G+ + H +
Sbjct: 69 VLHSDKKLTLVFEFCD--QDLKKYFDSCNGD--LDPEIVKSFLFQLLKGLGFCHSR---N 121
Query: 165 IIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV-S 223
++HRD+K N+L++ + E +A+FG A+ V + V TL Y P+ K+ S
Sbjct: 122 VLHRDLKPQNLLINRNGELKLANFGLARAFGIPVRCYSAEVV-TLWYRPPDVLFGAKLYS 180
Query: 224 ESCDVYSFGILLLEILTGRKPIEKLPGG 251
S D++S G + E+ +P+ PG
Sbjct: 181 TSIDMWSAGCIFAELANAGRPL--FPGN 206
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 72/334 (21%), Positives = 135/334 (40%), Gaps = 70/334 (20%)
Query: 33 YKELHTATNGFSDDNKLGEGGFGSVYWGRTSDGL----QIAVKKLKAMNSKAEMEFAVEV 88
Y+ + +N F ++K+GEG F SVY + +IA+K L + + + A E+
Sbjct: 13 YEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHL--IPTSHPIRIAAEL 70
Query: 89 EVLGRV-RHKNLLGLRGYCAGTDQRLIVYDYMPN---LSLLSHLHGQYAGEVQLDWKRRM 144
+ L N++G++ D +I Y+ + L +L+ L Q E L+ + +
Sbjct: 71 QCLTVAGGQDNVMGVKYCFRKNDHVVIAMPYLEHESFLDILNSLSFQEVREYMLNLFKAL 130
Query: 145 KIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL-VADFGFAK----------- 192
K +H I+HRD+K SN L + + + DFG A+
Sbjct: 131 K----------RIHQF---GIVHRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIELLK 177
Query: 193 -LIPEGVSHMTTRVK---------------GTLGYLAPE-YAMWGKVSESCDVYSFGILL 235
+ E ++ K GT G+ APE + + D++S G++
Sbjct: 178 FVQSEAQQERCSQNKCSICLSRRQQVAPRAGTPGFRAPEVLTKCPNQTTAIDMWSAGVIF 237
Query: 236 LEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDFDENQLKQAINVAVL 295
L +L+GR P K +T A+ + + RG + Q + ++L
Sbjct: 238 LSLLSGRYPFYK----ASDDLTALAQIMTI------------RGSRETIQAAKTFGKSIL 281
Query: 296 CVQSEPEKRPNMKEVVNTLTGYDPRGKVMQTRIE 329
C + P + +++++ L G D + + I+
Sbjct: 282 CSKEVPAQ--DLRKLCERLRGMDSSTPKLTSDIQ 313
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 52.4 bits (124), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 71/299 (23%), Positives = 125/299 (41%), Gaps = 39/299 (13%)
Query: 40 TNGFSDD----NKLGEGGFGSVYWG-RTSDGLQIAVKKL--KAMNSKAEMEFAVEVEVLG 92
+ FSD+ +LG+G F V + GL+ A K + K ++++ + E +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 93 RVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSA 151
+++H N++ L +V+D + L + ++ E + +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----- 115
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGT 208
E I Y H + I+HR++K N+LL S + +ADFG A I S GT
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT 170
Query: 209 LGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI-----EKLPGGVKRTITEWAEPL 263
GYL+PE S+ D+++ G++L +L G P +L +K ++ P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE 230
Query: 264 --IVKGKFKELVD------PKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
V + K L+D PK R D QA+ V +C + + ++ V+ L
Sbjct: 231 WDTVTPEAKSLIDSMLTVNPKKRITAD-----QALKVPWICNRERVASAIHRQDXVDCL 284
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.4 bits (124), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLR 103
LG G FG V + + G A+K K K + K E+E + E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK-EIEHTLNEKRILQAVNFPFLVKLE 107
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEG 153
+V +Y P + SHL H + YA ++ L ++
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------ 155
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
YLH + +I+RD+K N+++D V DFG AK V T + GT YLA
Sbjct: 156 --YLH---SLDLIYRDLKPENLMIDQQGYIQVTDFGLAK----RVKGRTWXLCGTPEYLA 206
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
PE + +++ D ++ G+L+ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPAFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 49/177 (27%), Positives = 84/177 (47%), Gaps = 8/177 (4%)
Query: 68 IAVKKL-KAMNSKAEMEFAV-EVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLL 125
+A+KKL + ++ + A E+ ++ V HKN++GL D + L+
Sbjct: 52 VAIKKLSRPFQNQTHAKRAYRELVLMKCVNHKNIIGLLNVFTPQKSLEEFQDVYIVMELM 111
Query: 126 SHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLV 185
Q +++LD +R + GI +LH + IIHRD+K SN+++ SD +
Sbjct: 112 DANLCQVI-QMELDHERMSYLLYQMLCGIKHLH---SAGIIHRDLKPSNIVVKSDCTLKI 167
Query: 186 ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGR 242
DFG A+ G S M T Y APE + E+ D++S G ++ E++ +
Sbjct: 168 LDFGLART--AGTSFMMEPEVVTRYYRAPEVILGMGYKENVDLWSVGCIMGEMVCHK 222
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 92/212 (43%), Gaps = 37/212 (17%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK---KLKAMNSKAEMEFAV-EVEVLGRVRHKNLLGLR 103
LG G FG V + + G A+K K K + K E+E + E +L V L+ L
Sbjct: 49 LGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLK-EIEHTLNEKRILQAVNFPFLVKLE 107
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHL---------HGQ-YAGEVQLDWKRRMKIAIGSAEG 153
+V +Y P + SHL H + YA ++ L ++
Sbjct: 108 FSFKDNSNLYMVMEYAPGGEMFSHLRRIGRFSEPHARFYAAQIVLTFE------------ 155
Query: 154 ILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
YLH + +I+RD+K N+++D V DFG AK V T + GT YLA
Sbjct: 156 --YLH---SLDLIYRDLKPENLMIDQQGYIKVTDFGLAK----RVKGRTWXLCGTPEYLA 206
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKPI 245
PE + +++ D ++ G+L+ E+ G P
Sbjct: 207 PEIILSKGYNKAVDWWALGVLIYEMAAGYPPF 238
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 130
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 187
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/206 (25%), Positives = 86/206 (41%), Gaps = 12/206 (5%)
Query: 49 LGEGGFGSVY-WGRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G +G R SDG + K+L +M + EV +L ++H N++ R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--RYY 71
Query: 106 CAGTDQR----LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
D+ IV +Y L S + LD + +++ + H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 162 T--PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
++HRD+K +NV LD + DFG A+++ S V GT Y++PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSFAKAFV-GTPYYMSPEQMNR 190
Query: 220 GKVSESCDVYSFGILLLEILTGRKPI 245
+E D++S G LL E+ P
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3QAM|E Chain E, Crystal Structure Of Glu208ala Mutant Of Catalytic Subunit
Of Camp- Dependent Protein Kinase
Length = 350
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT YLAP + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEYLAPAIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 52.0 bits (123), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 28/188 (14%)
Query: 113 LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKA 172
LI+ + M L S + Q G+ + +I I +LH + +I HRD+K
Sbjct: 83 LIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKP 137
Query: 173 SNVLLDSDFEPLV---ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVY 229
N+L S + V DFGFAK E + T Y+APE K +SCD++
Sbjct: 138 ENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 194
Query: 230 SFGILLLEILTGRKPI-----EKLPGGVKRTI---------TEWAEPLIVKGKFKELVDP 275
S G+++ +L G P + + G+KR I EW+E V K+L+
Sbjct: 195 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE---VSEDAKQLIRL 251
Query: 276 KLRGDFDE 283
L+ D E
Sbjct: 252 LLKTDPTE 259
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 69/281 (24%), Positives = 118/281 (41%), Gaps = 39/281 (13%)
Query: 40 TNGFSDD----NKLGEGGFGSVYWG-RTSDGLQIAVKKL--KAMNSKAEMEFAVEVEVLG 92
+ FSD+ +LG+G F V + GL+ A K + K ++++ + E +
Sbjct: 1 STKFSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICR 60
Query: 93 RVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSA 151
+++H N++ L +V+D + L + ++ E + +
Sbjct: 61 KLQHPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL----- 115
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGT 208
E I Y H + I+HR++K N+LL S + +ADFG A I S GT
Sbjct: 116 ESIAYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGT 170
Query: 209 LGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI-----EKLPGGVKRTITEWAEPL 263
GYL+PE S+ D+++ G++L +L G P +L +K ++ P
Sbjct: 171 PGYLSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPE 230
Query: 264 --IVKGKFKELVD------PKLRGDFDENQLKQAINVAVLC 296
V + K L+D PK R D QA+ V +C
Sbjct: 231 WDTVTPEAKSLIDSMLTVNPKKRITAD-----QALKVPWIC 266
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 17 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 76
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 77 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 130
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 131 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 187
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 188 VNYEPLGLEADMWSIGVITYILLSGASPF 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 54/188 (28%), Positives = 82/188 (43%), Gaps = 28/188 (14%)
Query: 113 LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKA 172
LI+ + M L S + Q G+ + +I I +LH + +I HRD+K
Sbjct: 102 LIIMECMEGGELFSRI--QERGDQAFTEREAAEIMRDIGTAIQFLH---SHNIAHRDVKP 156
Query: 173 SNVLLDSDFEPLV---ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVY 229
N+L S + V DFGFAK E + T Y+APE K +SCD++
Sbjct: 157 ENLLYTSKEKDAVLKLTDFGFAK---ETTQNALQTPCYTPYYVAPEVLGPEKYDKSCDMW 213
Query: 230 SFGILLLEILTGRKPI-----EKLPGGVKRTI---------TEWAEPLIVKGKFKELVDP 275
S G+++ +L G P + + G+KR I EW+E V K+L+
Sbjct: 214 SLGVIMYILLCGFPPFYSNTGQAISPGMKRRIRLGQYGFPNPEWSE---VSEDAKQLIRL 270
Query: 276 KLRGDFDE 283
L+ D E
Sbjct: 271 LLKTDPTE 278
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 52.0 bits (123), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 68/153 (44%), Gaps = 21/153 (13%)
Query: 166 IHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
IHRD+ A N+LL + + DFG A+ I P+ V TR+ L ++APE
Sbjct: 221 IHRDLAARNILLSENNVVKICDFGLARDIYKNPDYVRKGDTRL--PLKWMAPESIFDKIY 278
Query: 223 SESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRGDF 281
S DV+S+G+LL EI + G P PG + + F + +R
Sbjct: 279 STKSDVWSYGVLLWEIFSLGGSPY---PG------------VQMDEDFCSRLREGMRMRA 323
Query: 282 DENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
E + + + C +P++RP E+V L
Sbjct: 324 PEYSTPEIYQIMLDCWHRDPKERPRFAELVEKL 356
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 63/273 (23%), Positives = 120/273 (43%), Gaps = 28/273 (10%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKA-MNSKAEMEFAVEVEVLGR-VRHKNLLGLRG 104
+LG G +G V R G +AVK+++A +NS+ + +++++ R V + G
Sbjct: 58 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 117
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRM-KIAIGSAEGILYLHHEVTP 163
I + M + L + Q + Q + + KIA+ + + +LH +++
Sbjct: 118 ALFREGDVWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS- 174
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA----MW 219
+IHRD+K SNVL+++ + + DFG + + + V+ T G Y+APE
Sbjct: 175 -VIHRDVKPSNVLINALGQVKMCDFGISGYLVDSVAK--TIDAGCKPYMAPERINPELNQ 231
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
S D++S GI ++E+ R P + W P + E P+L
Sbjct: 232 KGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPFQQLKQVVEEPSPQLPA 280
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
D + ++ C++ ++RP E++
Sbjct: 281 DKFSAEF---VDFTSQCLKKNSKERPTYPELMQ 310
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 51.6 bits (122), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 104/234 (44%), Gaps = 38/234 (16%)
Query: 34 KELHTATNGFSDDNKLGEG-GFGSVYWGR----TSDGLQIAVKKLKAMNSKAEMEFAVEV 88
++LH + F+D ++ E G GS + + + AVK + K++ + E+
Sbjct: 11 QQLHRNSIQFTDGYEVKEDIGVGSYSVCKRCIHKATNXEFAVKII----DKSKRDPTEEI 66
Query: 89 EVLGRV-RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIA 147
E+L R +H N++ L+ VYD + +++ L GE+ R+ +
Sbjct: 67 EILLRYGQHPNIITLKD----------VYDDGKYVYVVTELXK--GGELLDKILRQKFFS 114
Query: 148 IGSAEGIL--------YLHHEVTPHIIHRDIKASNVL-LDSDFEP---LVADFGFAKLIP 195
A +L YLH + ++HRD+K SN+L +D P + DFGFAK +
Sbjct: 115 EREASAVLFTITKTVEYLHAQ---GVVHRDLKPSNILYVDESGNPESIRICDFGFAKQLR 171
Query: 196 EGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLP 249
+ T T ++APE +CD++S G+LL LTG P P
Sbjct: 172 AENGLLXTPCY-TANFVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTPFANGP 224
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 51.6 bits (122), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 69/278 (24%), Positives = 117/278 (42%), Gaps = 39/278 (14%)
Query: 43 FSDD----NKLGEGGFGSVYWG-RTSDGLQIAVKKL--KAMNSKAEMEFAVEVEVLGRVR 95
FSD+ +LG+G F V + GL+ A K + K ++++ + E + +++
Sbjct: 3 FSDNYDVKEELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQ 62
Query: 96 HKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGI 154
H N++ L +V+D + L + ++ E + + E I
Sbjct: 63 HPNIVRLHDSIQEESFHYLVFDLVTGGELFEDIVAREFYSEADASHCIQQIL-----ESI 117
Query: 155 LYLHHEVTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLGY 211
Y H + I+HR++K N+LL S + +ADFG A I S GT GY
Sbjct: 118 AYCH---SNGIVHRNLKPENLLLASKAKGAAVKLADFGLA--IEVNDSEAWHGFAGTPGY 172
Query: 212 LAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI-----EKLPGGVKRTITEWAEPL--I 264
L+PE S+ D+++ G++L +L G P +L +K ++ P
Sbjct: 173 LSPEVLKKDPYSKPVDIWACGVILYILLVGYPPFWDEDQHRLYAQIKAGAYDYPSPEWDT 232
Query: 265 VKGKFKELVD------PKLRGDFDENQLKQAINVAVLC 296
V + K L+D PK R D QA+ V +C
Sbjct: 233 VTPEAKSLIDSMLTVNPKKRITAD-----QALKVPWIC 265
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 51.6 bits (122), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 51.2 bits (121), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILILELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|2BUJ|A Chain A, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
pdb|2BUJ|B Chain B, Crystal Structure Of The Human Serine-Threonine Kinase 16
In Complex With Staurosporine
Length = 317
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 94/221 (42%), Gaps = 29/221 (13%)
Query: 47 NKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
KLGEGGF V DG A+K++ + E E ++ H N+L L Y
Sbjct: 35 QKLGEGGFSYVDLVEGLHDGHFYALKRILCHEQQDREEAQREADMHRLFNHPNILRLVAY 94
Query: 106 C----AGTDQRLIVYDYMPNLSLLSHLH-----GQYAGEVQLDWKRRMKIAIGSAEGILY 156
C + ++ + +L + + G + E Q+ W + +G G+
Sbjct: 95 CLRERGAKHEAWLLLPFFKRGTLWNEIERLKDKGNFLTEDQILW-----LLLGICRGLEA 149
Query: 157 LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGF---AKLIPEGVSHMTT-----RVKGT 208
+H HRD+K +N+LL + +P++ D G A + EG T + T
Sbjct: 150 IH---AKGYAHRDLKPTNILLGDEGQPVLMDLGSMNQACIHVEGSRQALTLQDWAAQRCT 206
Query: 209 LGYLAPE-YAMWGK--VSESCDVYSFGILLLEILTGRKPIE 246
+ Y APE +++ + E DV+S G +L ++ G P +
Sbjct: 207 ISYRAPELFSVQSHCVIDERTDVWSLGCVLYAMMFGEGPYD 247
>pdb|3ZUU|A Chain A, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
pdb|3ZUU|B Chain B, The Structure Of Ost1 (D160a, S175d) Kinase In Complex
With Gold
Length = 362
Score = 51.2 bits (121), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 22/217 (10%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G G FG R ++ K K + E+ +RH N++ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
IV +Y L + AG D R + S G+ Y H + HR
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLIS--GVSYCH---AMQVCHR 139
Query: 169 DIKASNVLLDSDFEPL--VADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMW----GK 221
D+K N LLD P + FG++K V H + GT Y+APE + GK
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKDTVGTPAYIAPEVLLKKEYDGK 196
Query: 222 VSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTI 256
V+ DV+S G+ L +L G P E + P ++TI
Sbjct: 197 VA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3ZUT|A Chain A, The Structure Of Ost1 (D160a) Kinase
pdb|3ZUT|B Chain B, The Structure Of Ost1 (D160a) Kinase
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/217 (26%), Positives = 86/217 (39%), Gaps = 22/217 (10%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
+G G FG R ++ K K + E+ +RH N++ +
Sbjct: 27 IGSGNFGVARLMRDKQSNELVAVKYIERGEKIDENVKREIINHRSLRHPNIVRFKEVILT 86
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
IV +Y L + AG D R + S G+ Y H + HR
Sbjct: 87 PTHLAIVMEYASGGELFERICN--AGRFSEDEARFFFQQLIS--GVSYCH---AMQVCHR 139
Query: 169 DIKASNVLLDSDFEPL--VADFGFAKLIPEGVSHMTTR-VKGTLGYLAPEYAMW----GK 221
D+K N LLD P + FG++K V H + GT Y+APE + GK
Sbjct: 140 DLKLENTLLDGSPAPRLKICAFGYSK---SSVLHSQPKSTVGTPAYIAPEVLLKKEYDGK 196
Query: 222 VSESCDVYSFGILLLEILTGRKPIE--KLPGGVKRTI 256
V+ DV+S G+ L +L G P E + P ++TI
Sbjct: 197 VA---DVWSCGVTLYVMLVGAYPFEDPEEPKNFRKTI 230
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 88/209 (42%), Gaps = 20/209 (9%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEM------EFAVEVEVLGRVRHKNLL 100
+LG G F V R S GLQ A K +K +K+ + EV +L ++H N++
Sbjct: 18 ELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHPNVI 77
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L +++ + + L L A + L + + G+ YLH
Sbjct: 78 TLHEVYENKTDVILIGELVAGGELFDFL----AEKESLTEEEATEFLKQILNGVYYLH-- 131
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
+ I H D+K N++L P + DFG A I G + + GT ++APE
Sbjct: 132 -SLQIAHFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFG--NEFKNIFGTPEFVAPEI 188
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ + D++S G++ +L+G P
Sbjct: 189 VNYEPLGLEADMWSIGVITYILLSGASPF 217
>pdb|1RDQ|E Chain E, Hydrolysis Of Atp In The Crystal Of Y204a Mutant Of
Camp-Dependent Protein Kinase
Length = 350
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 63/246 (25%), Positives = 100/246 (40%), Gaps = 45/246 (18%)
Query: 14 EEGLTTITTPNNATWRIFTYKELHTATNGFSDDNKLGEGGFGSVYWGRTSD-GLQIAVK- 71
E+ L TP+ T ++ + + T LG G FG V + + G A+K
Sbjct: 24 EDFLKKWETPSQNTAQLDQFDRIKT----------LGTGSFGRVMLVKHKESGNHYAMKI 73
Query: 72 --KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHL- 128
K K + K E +L V L+ L +V +Y+ + SHL
Sbjct: 74 LDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKLEFSFKDNSNLYMVMEYVAGGEMFSHLR 133
Query: 129 --------HGQ-YAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDS 179
H + YA ++ L ++ YLH + +I+RD+K N+L+D
Sbjct: 134 RIGRFSEPHARFYAAQIVLTFE--------------YLH---SLDLIYRDLKPENLLIDQ 176
Query: 180 DFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEIL 239
V DFGFAK V T + GT LAPE + +++ D ++ G+L+ E+
Sbjct: 177 QGYIQVTDFGFAK----RVKGRTWXLCGTPEALAPEIILSKGYNKAVDWWALGVLIYEMA 232
Query: 240 TGRKPI 245
G P
Sbjct: 233 AGYPPF 238
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 50.8 bits (120), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 64/255 (25%), Positives = 105/255 (41%), Gaps = 32/255 (12%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYC 106
KL E G ++ GR + + + V K++ +++ +F E L H N+L + G C
Sbjct: 17 KLNENHSGELWKGRWQGNDIVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGAC 76
Query: 107 AG--TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
++ + P SL + LH +D + +K A+ A G +LH + P
Sbjct: 77 QSPPAPHPTLITHWXPYGSLYNVLHE--GTNFVVDQSQAVKFALDXARGXAFLH-TLEPL 133
Query: 165 IIHRDIKASNVLLDSDFEPLV--ADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
I + + +V +D D + AD F+ P G + ++APE A+ K
Sbjct: 134 IPRHALNSRSVXIDEDXTARISXADVKFSFQSP-GRXYAP-------AWVAPE-ALQKKP 184
Query: 223 SE----SCDVYSFGILLLEILTGRKPIEKLPG----------GVKRTITEWAEPLIVK-G 267
+ S D +SF +LL E++T P L G++ TI P + K
Sbjct: 185 EDTNRRSADXWSFAVLLWELVTREVPFADLSNXEIGXKVALEGLRPTIPPGISPHVSKLX 244
Query: 268 KFKELVDPKLRGDFD 282
K DP R FD
Sbjct: 245 KICXNEDPAKRPKFD 259
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 49 LGEGGFGSVYWG----RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
LGEG FG VY G + + +AVK K + E F E ++ + H +++ L
Sbjct: 16 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 75
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G + I+ + P L G Y E + + + + + S + + + +
Sbjct: 76 GI-IEEEPTWIIMELYPYGEL-----GHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESI 128
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ +HRDI N+L+ S + DFG ++ I + + + + + +++PE + + +
Sbjct: 129 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 188
Query: 224 ESCDVYSFGILLLEILT-GRKP 244
+ DV+ F + + EIL+ G++P
Sbjct: 189 TASDVWMFAVCMWEILSFGKQP 210
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 50.4 bits (119), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 49 LGEGGFGSVYWG----RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
LGEG FG VY G + + +AVK K + E F E ++ + H +++ L
Sbjct: 20 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 79
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G + I+ + P L G Y E + + + + + S + + + +
Sbjct: 80 GI-IEEEPTWIIMELYPYGEL-----GHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESI 132
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ +HRDI N+L+ S + DFG ++ I + + + + + +++PE + + +
Sbjct: 133 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 192
Query: 224 ESCDVYSFGILLLEILT-GRKP 244
+ DV+ F + + EIL+ G++P
Sbjct: 193 TASDVWMFAVCMWEILSFGKQP 214
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 94/202 (46%), Gaps = 13/202 (6%)
Query: 49 LGEGGFGSVYWG----RTSDGLQIAVKKLKAMNSKAEME-FAVEVEVLGRVRHKNLLGLR 103
LGEG FG VY G + + +AVK K + E F E ++ + H +++ L
Sbjct: 32 LGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKLI 91
Query: 104 GYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
G + I+ + P L G Y E + + + + + S + + + +
Sbjct: 92 GI-IEEEPTWIIMELYPYGEL-----GHYL-ERNKNSLKVLTLVLYSLQICKAMAYLESI 144
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVS 223
+ +HRDI N+L+ S + DFG ++ I + + + + + +++PE + + +
Sbjct: 145 NCVHRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIKWMSPESINFRRFT 204
Query: 224 ESCDVYSFGILLLEILT-GRKP 244
+ DV+ F + + EIL+ G++P
Sbjct: 205 TASDVWMFAVCMWEILSFGKQP 226
>pdb|2V7O|A Chain A, Crystal Structure Of Human Calcium-Calmodulin-Dependent
Protein Kinase Ii Gamma
Length = 336
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/322 (22%), Positives = 130/322 (40%), Gaps = 37/322 (11%)
Query: 33 YKELHTATNGFSDD----NKLGEGGFGSVYWGRTSDGLQIAVKKL---KAMNSKAEMEFA 85
++ + T T F+DD +LG+G F V Q K+ K ++++ +
Sbjct: 20 FQXMATCTR-FTDDYQLFEELGKGAFSVVRRCVKKTPTQEYAAKIINTKKLSARDHQKLE 78
Query: 86 VEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMK 145
E + ++H N++ L + +V+D + GE+ D R
Sbjct: 79 REARICRLLKHPNIVRLHDSISEEGFHYLVFDLVT------------GGELFEDIVAREY 126
Query: 146 IAIGSAEGILYLHHEVTPHI-----IHRDIKASNVLLDSDFEPL---VADFGFAKLIPEG 197
+ A ++ E HI +HRD+K N+LL S + +ADFG A + +G
Sbjct: 127 YSEADASHCIHQILESVNHIHQHDIVHRDLKPENLLLASKCKGAAVKLADFGLAIEV-QG 185
Query: 198 VSHMTTRVKGTLGYLAPEYAMWGKVSESCDVYSFGILLLEILTGRKPI-----EKLPGGV 252
GT GYL+PE + D+++ G++L +L G P KL +
Sbjct: 186 EQQAWFGFAGTPGYLSPEVLRKDPYGKPVDIWACGVILYILLVGYPPFWDEDQHKLYQQI 245
Query: 253 KRTITEWAEPL--IVKGKFKELVDPKLRGDFDEN-QLKQAINVAVLCVQSEPEKRPNMKE 309
K ++ P V + K L++ L + + QA+ +C +S + +E
Sbjct: 246 KAGAYDFPSPEWDTVTPEAKNLINQMLTINPAKRITADQALKHPWVCQRSTVASMMHRQE 305
Query: 310 VVNTLTGYDPRGKVMQTRIETL 331
V L ++ R K+ + T+
Sbjct: 306 TVECLRKFNARRKLKGAILTTM 327
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 44/295 (14%)
Query: 46 DNKLGEGGFGSVYWG-RTSDG-------LQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHK 97
+ LG+G F ++ G R G ++ +K L + F ++ ++ HK
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
+L+ G C D+ ++V +++ SL ++L + + + WK +++A A + +L
Sbjct: 73 HLVLNYGVCVCGDENILVQEFVKFGSLDTYLK-KNKNCINILWK--LEVAKQLAAAMHFL 129
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG----YLA 213
+IH ++ A N+LL + + + F KL G+S +T K L ++
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVP 185
Query: 214 PEYAMWGK-VSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
PE K ++ + D +SFG L EI + G KP+ L K E +
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE---------DRHQ 236
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV---NTLTGYD--PRG 321
L PK +L IN C+ EP+ RP+ + ++ N+L D PRG
Sbjct: 237 LPAPKAA------ELANLINN---CMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 50.1 bits (118), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/199 (21%), Positives = 90/199 (45%), Gaps = 12/199 (6%)
Query: 49 LGEGGFGSVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGYCAG 108
LG G FG V+ + + + K + ++ E+ +L RH+N+L L
Sbjct: 13 LGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLVKKEISILNIARHRNILHLHESFES 72
Query: 109 TDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPHIIHR 168
++ +++++++ L + ++ +L+ + + E + +LH + +I H
Sbjct: 73 MEELVMIFEFISGLDIFERIN---TSAFELNEREIVSYVHQVCEALQFLH---SHNIGHF 126
Query: 169 DIKASNVLLDSDFEPLVA--DFGFAKLIPEGVSHMTTRVKGTL-GYLAPEYAMWGKVSES 225
DI+ N++ + + +FG A+ + G + R+ T Y APE VS +
Sbjct: 127 DIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNF---RLLFTAPEYYAPEVHQHDVVSTA 183
Query: 226 CDVYSFGILLLEILTGRKP 244
D++S G L+ +L+G P
Sbjct: 184 TDMWSLGTLVYVLLSGINP 202
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 49.7 bits (117), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 64/130 (49%), Gaps = 12/130 (9%)
Query: 152 EGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGY 211
+GI YLH++ IIHRDIK SN+L+ D +ADFG + +G + + GT +
Sbjct: 148 KGIEYLHYQ---KIIHRDIKPSNLLVGEDGHIKIADFGVSNEF-KGSDALLSNTVGTPAF 203
Query: 212 LAPEYAMWGK---VSESCDVYSFGILLLEILTGRKP-----IEKLPGGVKRTITEWAEPL 263
+APE + ++ DV++ G+ L + G+ P I L +K E+ +
Sbjct: 204 MAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCPFMDERIMCLHSKIKSQALEFPDQP 263
Query: 264 IVKGKFKELV 273
+ K+L+
Sbjct: 264 DIAEDLKDLI 273
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 51/213 (23%), Positives = 104/213 (48%), Gaps = 20/213 (9%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVKKLKAMN-SKAEMEFAVEVEVLGRVRHKNLLGLRG-Y 105
K+G G +G VY + DG LK + + M E+ +L ++H N++ L+ +
Sbjct: 28 KVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACREIALLRELKHPNVISLQKVF 87
Query: 106 CAGTDQRL-IVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILY-----LHH 159
+ D+++ +++DY + L + A + K+ +++ G + +LY +H+
Sbjct: 88 LSHADRKVWLLFDYAEH-DLWHIIKFHRASKAN---KKPVQLPRGMVKSLLYQILDGIHY 143
Query: 160 EVTPHIIHRDIKASNVLLDSDFEPL----VADFGFAKLIPEGVSHMT--TRVKGTLGYLA 213
++HRD+K +N+L+ + +AD GFA+L + + V T Y A
Sbjct: 144 LHANWVLHRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDPVVVTFWYRA 203
Query: 214 PEYAMWGK-VSESCDVYSFGILLLEILTGRKPI 245
PE + + +++ D+++ G + E+LT +PI
Sbjct: 204 PELLLGARHYTKAIDIWAIGCIFAELLTS-EPI 235
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 49.3 bits (116), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 119/273 (43%), Gaps = 28/273 (10%)
Query: 48 KLGEGGFGSVYWGR-TSDGLQIAVKKLKA-MNSKAEMEFAVEVEVLGR-VRHKNLLGLRG 104
+LG G +G V R G +AVK+++A +NS+ + +++++ R V + G
Sbjct: 14 ELGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDISMRTVDCPFTVTFYG 73
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRM-KIAIGSAEGILYLHHEVTP 163
I + M + L + Q + Q + + KIA+ + + +LH +++
Sbjct: 74 ALFREGDVWICMELMD--TSLDKFYKQVIDKGQTIPEDILGKIAVSIVKALEHLHSKLS- 130
Query: 164 HIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA----MW 219
+IHRD+K SNVL+++ + + DFG + + + V+ G Y+APE
Sbjct: 131 -VIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDID--AGCKPYMAPERINPELNQ 187
Query: 220 GKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELVDPKLRG 279
S D++S GI ++E+ R P + W P + E P+L
Sbjct: 188 KGYSVKSDIWSLGITMIELAILRFPYD-----------SWGTPFQQLKQVVEEPSPQLPA 236
Query: 280 DFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
D + ++ C++ ++RP E++
Sbjct: 237 DKFSAEF---VDFTSQCLKKNSKERPTYPELMQ 266
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 43 FSDDNKLGEGGFGSVYWGRTSDGLQI--AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
++ +N +G G +G V G +I A KK+ + F E+E++ + H N++
Sbjct: 11 YTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 69
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHL-HGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
L +V + L + H + E D R MK + + + Y H
Sbjct: 70 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES--DAARIMKDVLSA---VAYCHK 124
Query: 160 EVTPHIIHRDIKASNVLL--DSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
++ HRD+K N L DS PL + DFG A G M T+V GT Y++P+
Sbjct: 125 L---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYYVSPQ- 178
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ G CD +S G+++ +L G P
Sbjct: 179 VLEGLYGPECDEWSAGVMMYVLLCGYPPF 207
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 49.3 bits (116), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 52/206 (25%), Positives = 85/206 (41%), Gaps = 12/206 (5%)
Query: 49 LGEGGFGSVY-WGRTSDGLQIAVKKLK--AMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
+G G +G R SDG + K+L +M + EV +L ++H N++ R Y
Sbjct: 14 IGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNLLRELKHPNIV--RYY 71
Query: 106 CAGTDQR----LIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEV 161
D+ IV +Y L S + LD + +++ + H
Sbjct: 72 DRIIDRTNTTLYIVMEYCEGGDLASVITKGTKERQYLDEEFVLRVMTQLTLALKECHRRS 131
Query: 162 T--PHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMW 219
++HRD+K +NV LD + DFG A+++ V GT Y++PE
Sbjct: 132 DGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDFAKEFV-GTPYYMSPEQMNR 190
Query: 220 GKVSESCDVYSFGILLLEILTGRKPI 245
+E D++S G LL E+ P
Sbjct: 191 MSYNEKSDIWSLGCLLYELCALMPPF 216
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 35 ELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKL-------KAMNSKAEM----E 83
ELH + ++ + G +G+V G S+G+ +A+K++ + +N ++
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 84 FAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E+ +L H N+LGLR ++ M L L++ L +V D +R
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHD--QR 128
Query: 144 MKIAIGSAEGILY-----LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV 198
+ I+ + +Y LH ++HRD+ N+LL + + + DF A+ +
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTA 186
Query: 199 SHMTTRVKGTLGYLAPEYAMWGK-VSESCDVYSFGILLLEILTGR 242
T Y APE M K ++ D++S G ++ E+ +
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 51/225 (22%), Positives = 97/225 (43%), Gaps = 26/225 (11%)
Query: 35 ELHTATNGFSDDNKLGEGGFGSVYWGRTSDGLQIAVKKL-------KAMNSKAEM----E 83
ELH + ++ + G +G+V G S+G+ +A+K++ + +N ++
Sbjct: 16 ELHAMQSPYTVQRFISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKR 75
Query: 84 FAVEVEVLGRVRHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRR 143
E+ +L H N+LGLR ++ M L L++ L +V D +R
Sbjct: 76 VLREIRLLNHFHHPNILGLRDIFVHFEE-----PAMHKLYLVTELMRTDLAQVIHD--QR 128
Query: 144 MKIAIGSAEGILY-----LHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGV 198
+ I+ + +Y LH ++HRD+ N+LL + + + DF A+ +
Sbjct: 129 IVISPQHIQYFMYHILLGLHVLHEAGVVHRDLHPGNILLADNNDITICDFNLAR--EDTA 186
Query: 199 SHMTTRVKGTLGYLAPEYAMWGK-VSESCDVYSFGILLLEILTGR 242
T Y APE M K ++ D++S G ++ E+ +
Sbjct: 187 DANKTHYVTHRWYRAPELVMQFKGFTKLVDMWSAGCVMAEMFNRK 231
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 48.9 bits (115), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 56/209 (26%), Positives = 91/209 (43%), Gaps = 18/209 (8%)
Query: 43 FSDDNKLGEGGFGSVYWGRTSDGLQI--AVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
++ +N +G G +G V G +I A KK+ + F E+E++ + H N++
Sbjct: 28 YTLENTIGRGSWGEVKIA-VQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNII 86
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHL-HGQYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
L +V + L + H + E D R MK + + + Y H
Sbjct: 87 RLYETFEDNTDIYLVMELCTGGELFERVVHKRVFRES--DAARIMKDVLSA---VAYCHK 141
Query: 160 EVTPHIIHRDIKASNVLL--DSDFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEY 216
++ HRD+K N L DS PL + DFG A G M T+V GT Y++P+
Sbjct: 142 L---NVAHRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPG-KMMRTKV-GTPYYVSPQ- 195
Query: 217 AMWGKVSESCDVYSFGILLLEILTGRKPI 245
+ G CD +S G+++ +L G P
Sbjct: 196 VLEGLYGPECDEWSAGVMMYVLLCGYPPF 224
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 48.5 bits (114), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 72/295 (24%), Positives = 128/295 (43%), Gaps = 44/295 (14%)
Query: 46 DNKLGEGGFGSVYWG-RTSDG-------LQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHK 97
+ LG+G F ++ G R G ++ +K L + F ++ ++ HK
Sbjct: 13 NESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSESFFEAASMMSKLSHK 72
Query: 98 NLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYL 157
+L+ G C D+ ++V +++ SL ++L + + + WK +++A A + +L
Sbjct: 73 HLVLNYGVCFCGDENILVQEFVKFGSLDTYL-KKNKNCINILWK--LEVAKQLAWAMHFL 129
Query: 158 HHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLG----YLA 213
+IH ++ A N+LL + + + F KL G+S +T K L ++
Sbjct: 130 EENT---LIHGNVCAKNILLIREEDRKTGNPPFIKLSDPGIS-ITVLPKDILQERIPWVP 185
Query: 214 PEYAMWGK-VSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
PE K ++ + D +SFG L EI + G KP+ L K E +
Sbjct: 186 PECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSALDSQRKLQFYE---------DRHQ 236
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV---NTLTGYD--PRG 321
L PK +L IN C+ EP+ RP+ + ++ N+L D PRG
Sbjct: 237 LPAPKAA------ELANLINN---CMDYEPDHRPSFRAIIRDLNSLFTPDLVPRG 282
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKG 207
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 203 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 257
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
L ++APE + DV+SFG+LL EI + G P GVK +
Sbjct: 258 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK-----------ID 302
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+F + R + + + C EP +RP E+V L
Sbjct: 303 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 350
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKG 207
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 208 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 262
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
L ++APE + DV+SFG+LL EI + G P GVK +
Sbjct: 263 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK-----------ID 307
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+F + R + + + C EP +RP E+V L
Sbjct: 308 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 355
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKG 207
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 210 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 264
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
L ++APE + DV+SFG+LL EI + G P GVK +
Sbjct: 265 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK-----------ID 309
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+F + R + + + C EP +RP E+V L
Sbjct: 310 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 357
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 71/168 (42%), Gaps = 24/168 (14%)
Query: 151 AEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFAKLI---PEGVSHMTTRVKG 207
A+G+ +L + IHRD+ A N+LL + DFG A+ I P+ V R+
Sbjct: 201 AKGMEFL---ASRKCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARL-- 255
Query: 208 TLGYLAPEYAMWGKVSESCDVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEPLIVK 266
L ++APE + DV+SFG+LL EI + G P GVK +
Sbjct: 256 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP----GVK-----------ID 300
Query: 267 GKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVNTL 314
+F + R + + + C EP +RP E+V L
Sbjct: 301 EEFCRRLKEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 48.5 bits (114), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/211 (22%), Positives = 91/211 (43%), Gaps = 18/211 (8%)
Query: 38 TATNGFSDDNKLGEGGFGSVYWG-RTSDGLQIAVKKLKAMNSKAEMEFAV--EVEVLGRV 94
T+ + + KLGEG +G VY T +A+K+++ + + + EV +L +
Sbjct: 31 TSIDRYRRITKLGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIREVSLLKEL 90
Query: 95 RHKNLLGLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
+H+N++ L+ + ++++Y N L + + G+
Sbjct: 91 QHRNIIELKSVIHHNHRLHLIFEYAEN-----DLKKYMDKNPDVSMRVIKSFLYQLINGV 145
Query: 155 LYLHHEVTPHIIHRDIKASNVLL---DSDFEPL--VADFGFAKLIPEGVSHMTTRVKGTL 209
+ H +HRD+K N+LL D+ P+ + DFG A+ + T + TL
Sbjct: 146 NFCHSR---RCLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEII-TL 201
Query: 210 GYLAPEYAMWGK-VSESCDVYSFGILLLEIL 239
Y PE + + S S D++S + E+L
Sbjct: 202 WYRPPEILLGSRHYSTSVDIWSIACIWAEML 232
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 48/205 (23%), Positives = 89/205 (43%), Gaps = 16/205 (7%)
Query: 48 KLGEGGFGSVYWG-RTSDGLQIAVKKL--KAMNSKAEMEFAVEVEVLGRVRHKNLLGLRG 104
+LG+G F V + G + A K + K ++++ + E + ++H N++ L
Sbjct: 29 ELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARDHQKLEREARICRLLKHPNIVRLHD 88
Query: 105 YCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTP 163
+ +++D + L + +Y E + + E +L+ H
Sbjct: 89 SISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL-----EAVLHCHQM--- 140
Query: 164 HIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWG 220
++HRD+K N+LL S + +ADFG A + EG GT GYL+PE
Sbjct: 141 GVVHRDLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVLRKD 199
Query: 221 KVSESCDVYSFGILLLEILTGRKPI 245
+ D+++ G++L +L G P
Sbjct: 200 PYGKPVDLWACGVILYILLVGYPPF 224
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 48.1 bits (113), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 54/108 (50%), Gaps = 13/108 (12%)
Query: 143 RMKIAIGSAEGILYLHHEVTPHIIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHM 201
+M +AI A L H V IHRD+K SN+LLD + + DFG + +L+ +
Sbjct: 128 KMTVAIVKALYYLKEKHGV----IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKD- 182
Query: 202 TTRVKGTLGYLAPEYAMWGKVSES-----CDVYSFGILLLEILTGRKP 244
R G Y+APE ++ DV+S GI L+E+ TG+ P
Sbjct: 183 --RSAGCAAYMAPERIDPPDPTKPDYDIRADVWSLGISLVELATGQFP 228
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 37/80 (46%)
Query: 167 HRDIKASNVLLDSDFEPLVADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYAMWGKVSESC 226
HRD+K N+L+ +D + DFG A + GTL Y APE +
Sbjct: 157 HRDVKPENILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRA 216
Query: 227 DVYSFGILLLEILTGRKPIE 246
D+Y+ +L E LTG P +
Sbjct: 217 DIYALTCVLYECLTGSPPYQ 236
>pdb|3P23|A Chain A, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|B Chain B, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|C Chain C, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
pdb|3P23|D Chain D, Crystal Structure Of The Human Kinase And Rnase Domains In
Complex With Adp
Length = 432
Score = 48.1 bits (113), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 66/289 (22%), Positives = 124/289 (42%), Gaps = 50/289 (17%)
Query: 42 GFSDDNKLGEGGFGSVYWGRTSDGLQIAVKK-LKAMNSKAEMEFAVEVEVLGRVRHKNLL 100
F + LG G G++ + D +AVK+ L S A+ E + E H N++
Sbjct: 25 SFCPKDVLGHGAEGTIVYRGMFDNRDVAVKRILPECFSFADREVQLLRE---SDEHPNVI 81
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAI--GSAEGILYLH 158
R +C D++ + Y+ + L + +Y + I + + G+ +LH
Sbjct: 82 --RYFCTEKDRQ---FQYIA-IELCAATLQEYVEQKDFAHLGLEPITLLQQTTSGLAHLH 135
Query: 159 HEVTPHIIHRDIKASNVLLD-----SDFEPLVADFGFAKLIPEGVSHMTTR--VKGTLGY 211
+ +I+HRD+K N+L+ + +++DFG K + G + R V GT G+
Sbjct: 136 ---SLNIVHRDLKPHNILISMPNAHGKIKAMISDFGLCKKLAVGRHSFSRRSGVPGTEGW 192
Query: 212 LAPEYAMWGKVSESC--------DVYSFGILLLEILT-GRKPIEKLPGGVKRTITEWAEP 262
+APE +SE C D++S G + +++ G P K ++ A
Sbjct: 193 IAPEM-----LSEDCKENPTYTVDIFSAGCVFYYVISEGSHPFGK-------SLQRQANI 240
Query: 263 LIVKGKFKELVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
L+ + + P+ D +L + + + +P+KRP+ K V+
Sbjct: 241 LLGACSL-DCLHPEKHEDVIARELIEKM------IAMDPQKRPSAKHVL 282
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 49/208 (23%), Positives = 88/208 (42%), Gaps = 22/208 (10%)
Query: 48 KLGEGGFG------SVYWGRTSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
+LG+G F V G+ + I KKL A + + + E + ++H N++
Sbjct: 18 ELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQ---KLEREARICRLLKHPNIVR 74
Query: 102 LRGYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHHE 160
L + +++D + L + +Y E + + E +L+ H
Sbjct: 75 LHDSISEEGHHYLIFDLVTGGELFEDIVAREYYSEADASHCIQQIL-----EAVLHCHQM 129
Query: 161 VTPHIIHRDIKASNVLLDSDFEPL---VADFGFAKLIPEGVSHMTTRVKGTLGYLAPEYA 217
++HR++K N+LL S + +ADFG A + EG GT GYL+PE
Sbjct: 130 ---GVVHRNLKPENLLLASKLKGAAVKLADFGLAIEV-EGEQQAWFGFAGTPGYLSPEVL 185
Query: 218 MWGKVSESCDVYSFGILLLEILTGRKPI 245
+ D+++ G++L +L G P
Sbjct: 186 RKDPYGKPVDLWACGVILYILLVGYPPF 213
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 48.1 bits (113), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 59/221 (26%), Positives = 103/221 (46%), Gaps = 33/221 (14%)
Query: 46 DNKLGEGGFGSVYWGRTSDGL----QIAVKKLKAMNSKAEMEFAVEVEVLGRVR-HKNLL 100
++ LGEG V +T L + AVK ++ EVE+L + + H+N+L
Sbjct: 18 EDVLGEGAHARV---QTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQGHRNVL 74
Query: 101 GLRGYCAGTDQRLIVYDYMPNLSLLSHLHG-QYAGEVQLDWKRRMKIAIGSAEGILYLHH 159
L + D+ +V++ M S+LSH+H ++ E++ + A + +LH+
Sbjct: 75 ELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRHFNELEAS-----VVVQDVASALDFLHN 129
Query: 160 EVTPHIIHRDIKASNVLLD--SDFEPL-VADFGFAKLI-------PEGVSHMTTRVKGTL 209
+ I HRD+K N+L + + P+ + DFG I P + T G+
Sbjct: 130 K---GIAHRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC-GSA 185
Query: 210 GYLAPEY--AMWGKVS---ESCDVYSFGILLLEILTGRKPI 245
Y+APE A + S + CD++S G++L +L+G P
Sbjct: 186 EYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPPF 226
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 47.8 bits (112), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 120/279 (43%), Gaps = 39/279 (13%)
Query: 49 LGEGGFGSVYWGRTSD-GLQIAVK-----KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGL 102
+G+G F V + G Q AVK K + + + E + ++H +++ L
Sbjct: 32 IGKGAFSVVRRCINRETGQQFAVKIVDVAKFTSSPGLSTEDLKREASICHMLKHPHIVEL 91
Query: 103 RGYCAGTDQRLIVYDYMPNLSLLSHLHGQ------YAGEVQLDWKRRMKIAIGSAEGILY 156
+ +V+++M L + + Y+ V + R++ E + Y
Sbjct: 92 LETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFVYSEAVASHYMRQI------LEALRY 145
Query: 157 LHHEVTPHIIHRDIKASNVLLDS--DFEPL-VADFGFAKLIPEGVSHMTTRVKGTLGYLA 213
H +IIHRD+K NVLL S + P+ + DFG A + E RV GT ++A
Sbjct: 146 CHDN---NIIHRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRV-GTPHFMA 201
Query: 214 PEYAMWGKVSESCDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKELV 273
PE + DV+ G++L +L+G P G K + E I+KGK+K +
Sbjct: 202 PEVVKREPYGKPVDVWGCGVILFILLSGCLPFY----GTKERLFEG----IIKGKYK--M 251
Query: 274 DPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVVN 312
+P+ E+ A ++ + +P +R + E +N
Sbjct: 252 NPRQWSHISES----AKDLVRRMLMLDPAERITVYEALN 286
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 103/216 (47%), Gaps = 22/216 (10%)
Query: 43 FSDDNKLGEGGFGSVYWGR-TSDGLQIAVKKLKAMNSKAEMEFAVEVEVLGRVRHKNLLG 101
F + G+G FG+V G+ S G+ +A+KK+ E + ++ L + H N++
Sbjct: 25 FQVERMAGQGTFGTVQLGKEKSTGMSVAIKKVIQDPRFRNRELQI-MQDLAVLHHPNIVQ 83
Query: 102 LRGY---CAGTDQRLI----VYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGI 154
L+ Y D+R I V +Y+P+ +L Y +V +K+ +
Sbjct: 84 LQSYFYTLGERDRRDIYLNVVMEYVPD-TLHRCCRNYYRRQVA-PPPILIKVFLFQLIRS 141
Query: 155 LYLHHEVTPHIIHRDIKASNVLLD-SDFEPLVADFGFA-KLIPE--GVSHMTTRVKGTLG 210
+ H + ++ HRDIK NVL++ +D + DFG A KL P V+++ +R
Sbjct: 142 IGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSEPNVAYICSRY----- 196
Query: 211 YLAPEYAMWGK-VSESCDVYSFGILLLEILTGRKPI 245
Y APE + + + D++S G + E++ G +PI
Sbjct: 197 YRAPELIFGNQHYTTAVDIWSVGCIFAEMMLG-EPI 231
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVK--KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
++G GG V+ A+K L+ +++ + E+ L +++ + +R Y
Sbjct: 35 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 94
Query: 106 -CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
TDQ + + N+ L S L + + + W+R+ + +L H + H
Sbjct: 95 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERK-----SYWKNMLEAVHTIHQH 146
Query: 165 -IIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
I+H D+K +N L+ L+ DFG A ++ P+ S + GT+ Y+ PE
Sbjct: 147 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 205
Query: 223 SES-----------CDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
S DV+S G +L + G+ P +++ + K
Sbjct: 206 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------------SKLHA 251
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++DP +F + K +V C++ +P++R ++ E++
Sbjct: 252 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 291
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVK--KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
++G GG V+ A+K L+ +++ + E+ L +++ + +R Y
Sbjct: 16 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 75
Query: 106 -CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
TDQ + + N+ L S L + + + W+R+ + +L H + H
Sbjct: 76 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERK-----SYWKNMLEAVHTIHQH 127
Query: 165 -IIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
I+H D+K +N L+ L+ DFG A ++ P+ S + GT+ Y+ PE
Sbjct: 128 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 186
Query: 223 SES-----------CDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
S DV+S G +L + G+ P +++ + K
Sbjct: 187 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------------SKLHA 232
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++DP +F + K +V C++ +P++R ++ E++
Sbjct: 233 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 272
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 47.0 bits (110), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/280 (21%), Positives = 118/280 (42%), Gaps = 39/280 (13%)
Query: 48 KLGEGGFGSVYWGRTSDGLQIAVK--KLKAMNSKAEMEFAVEVEVLGRVRHKNLLGLRGY 105
++G GG V+ A+K L+ +++ + E+ L +++ + +R Y
Sbjct: 15 QIGSGGSSKVFQVLNEKKQIYAIKYVNLEEADNQTLDSYRNEIAYLNKLQQHSDKIIRLY 74
Query: 106 -CAGTDQRLIVYDYMPNLSLLSHLHGQYAGEVQLDWKRRMKIAIGSAEGILYLHHEVTPH 164
TDQ + + N+ L S L + + + W+R+ + +L H + H
Sbjct: 75 DYEITDQYIYMVMECGNIDLNSWLKKKKSID---PWERK-----SYWKNMLEAVHTIHQH 126
Query: 165 -IIHRDIKASNVLLDSDFEPLVADFGFA-KLIPEGVSHMTTRVKGTLGYLAPEYAMWGKV 222
I+H D+K +N L+ L+ DFG A ++ P+ S + GT+ Y+ PE
Sbjct: 127 GIVHSDLKPANFLIVDGMLKLI-DFGIANQMQPDTTSVVKDSQVGTVNYMPPEAIKDMSS 185
Query: 223 SES-----------CDVYSFGILLLEILTGRKPIEKLPGGVKRTITEWAEPLIVKGKFKE 271
S DV+S G +L + G+ P +++ + K
Sbjct: 186 SRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQI--------------SKLHA 231
Query: 272 LVDPKLRGDFDENQLKQAINVAVLCVQSEPEKRPNMKEVV 311
++DP +F + K +V C++ +P++R ++ E++
Sbjct: 232 IIDPNHEIEFPDIPEKDLQDVLKCCLKRDPKQRISIPELL 271
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.318 0.137 0.409
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 11,796,641
Number of Sequences: 62578
Number of extensions: 499948
Number of successful extensions: 3617
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 866
Number of HSP's successfully gapped in prelim test: 228
Number of HSP's that attempted gapping in prelim test: 1273
Number of HSP's gapped (non-prelim): 1150
length of query: 380
length of database: 14,973,337
effective HSP length: 101
effective length of query: 279
effective length of database: 8,652,959
effective search space: 2414175561
effective search space used: 2414175561
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 52 (24.6 bits)