Query 037875
Match_columns 204
No_of_seqs 125 out of 1841
Neff 10.8
Searched_HMMs 29240
Date Mon Mar 25 08:22:29 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037875.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037875hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4b93_B Ankyrin repeat domain-c 100.0 2.1E-35 7.1E-40 219.4 15.6 170 6-190 66-237 (269)
2 4gpm_A Engineered protein OR26 100.0 1.6E-34 5.5E-39 200.3 16.7 154 26-194 6-161 (169)
3 4gpm_A Engineered protein OR26 100.0 5.9E-33 2E-37 192.5 16.9 148 5-167 16-165 (169)
4 1yyh_A HN1;, notch 1, ankyrin 100.0 3.3E-33 1.1E-37 205.8 16.4 179 4-196 34-217 (253)
5 2rfm_A Putative ankyrin repeat 100.0 7.6E-33 2.6E-37 195.8 16.2 165 13-192 24-190 (192)
6 1oy3_D Transcription factor in 100.0 8.5E-33 2.9E-37 206.0 16.8 178 5-196 21-252 (282)
7 2f8y_A Notch homolog 1, transl 100.0 2.7E-32 9.2E-37 197.0 18.5 175 6-194 38-216 (223)
8 2rfa_A Transient receptor pote 100.0 2.7E-32 9.1E-37 198.2 18.5 181 5-195 15-223 (232)
9 2xai_A ASB-9, ankyrin repeat a 100.0 2.1E-32 7.3E-37 202.3 17.7 171 7-194 50-222 (261)
10 3aji_A 26S proteasome non-ATPa 100.0 2E-32 6.7E-37 198.7 17.0 174 6-194 19-197 (231)
11 3hra_A Ankyrin repeat family p 100.0 3.6E-32 1.2E-36 193.4 17.9 173 6-192 18-201 (201)
12 2f8y_A Notch homolog 1, transl 100.0 8.9E-33 3.1E-37 199.5 14.5 179 5-197 3-186 (223)
13 3kea_A K1L; tropism, ANK repea 100.0 1.9E-32 6.7E-37 205.1 16.1 177 5-197 43-223 (285)
14 1yyh_A HN1;, notch 1, ankyrin 100.0 3.8E-32 1.3E-36 200.1 17.4 173 5-191 69-245 (253)
15 2etb_A Transient receptor pote 100.0 2.5E-32 8.7E-37 201.2 16.0 181 6-196 19-248 (256)
16 3b7b_A Euchromatic histone-lys 100.0 8.4E-32 2.9E-36 196.1 18.5 178 5-196 23-204 (237)
17 2dzn_A Probable 26S proteasome 100.0 1.2E-31 4E-36 194.2 18.1 177 6-195 15-201 (228)
18 3aji_A 26S proteasome non-ATPa 100.0 1.3E-31 4.4E-36 194.4 18.1 174 5-193 52-229 (231)
19 2xai_A ASB-9, ankyrin repeat a 100.0 1.4E-31 4.6E-36 198.0 18.0 176 5-197 15-194 (261)
20 2dzn_A Probable 26S proteasome 100.0 2.1E-31 7.3E-36 192.8 17.7 165 5-181 48-218 (228)
21 3jxi_A Vanilloid receptor-rela 100.0 7E-32 2.4E-36 199.2 15.4 181 6-196 22-252 (260)
22 3d9h_A CDNA FLJ77766, highly s 100.0 1.6E-31 5.6E-36 200.0 17.5 171 6-191 72-275 (285)
23 3v31_A Ankyrin repeat family A 100.0 1.7E-31 5.7E-36 184.8 16.0 155 23-192 2-158 (167)
24 1k1a_A B-cell lymphoma 3-encod 100.0 1.3E-31 4.4E-36 195.4 15.9 178 6-197 22-211 (241)
25 3ljn_A Hypothetical protein; a 100.0 5.7E-32 2E-36 208.8 14.6 183 7-195 67-270 (364)
26 3b7b_A Euchromatic histone-lys 100.0 3.8E-31 1.3E-35 192.6 18.1 168 5-186 56-225 (237)
27 2y1l_E Darpin-8.4; hydrolase-i 100.0 2.6E-31 8.7E-36 184.3 15.9 157 21-192 11-169 (169)
28 1oy3_D Transcription factor in 100.0 2.5E-31 8.6E-36 198.0 16.4 168 5-182 57-269 (282)
29 1s70_B 130 kDa myosin-binding 100.0 3.4E-31 1.1E-35 199.2 17.1 161 5-180 52-274 (299)
30 4hbd_A KN motif and ankyrin re 100.0 1.2E-31 4.2E-36 199.8 14.4 175 5-192 88-273 (276)
31 1ikn_D Protein (I-kappa-B-alph 100.0 3E-32 1E-36 198.5 10.6 174 8-195 23-210 (236)
32 3d9h_A CDNA FLJ77766, highly s 100.0 6.4E-31 2.2E-35 196.8 18.0 166 12-193 47-214 (285)
33 1k1a_A B-cell lymphoma 3-encod 100.0 1.2E-30 4.1E-35 190.3 19.0 176 5-191 58-238 (241)
34 3utm_A Tankyrase-1; tankyrase, 100.0 1.2E-30 4E-35 199.9 19.5 184 7-198 38-309 (351)
35 4g8k_A 2-5A-dependent ribonucl 100.0 6.3E-31 2.1E-35 201.1 17.7 189 5-195 37-299 (337)
36 1sw6_A Regulatory protein SWI6 100.0 2.5E-31 8.7E-36 202.6 15.3 172 4-181 108-326 (327)
37 3twr_A Tankyrase-2; ankyrin re 100.0 2.6E-31 9E-36 183.5 13.8 160 20-193 4-164 (165)
38 1ihb_A P18-INK4C(INK6), cyclin 100.0 3.4E-31 1.1E-35 182.3 14.2 156 22-193 3-161 (162)
39 3v30_A DNA-binding protein rfx 100.0 8.2E-31 2.8E-35 182.1 16.2 156 24-193 2-159 (172)
40 2pnn_A Transient receptor pote 100.0 8.4E-31 2.9E-35 194.8 17.1 178 8-195 32-259 (273)
41 4b93_B Ankyrin repeat domain-c 100.0 3.4E-31 1.2E-35 196.7 13.2 178 5-197 23-213 (269)
42 1wdy_A 2-5A-dependent ribonucl 100.0 4.2E-30 1.4E-34 191.4 18.8 183 5-194 17-211 (285)
43 3v30_A DNA-binding protein rfx 100.0 4.8E-30 1.6E-34 178.3 17.5 155 5-174 14-171 (172)
44 1wdy_A 2-5A-dependent ribonucl 100.0 3.8E-30 1.3E-34 191.6 18.0 183 6-195 52-279 (285)
45 2rfa_A Transient receptor pote 100.0 4.1E-30 1.4E-34 186.6 17.3 165 23-195 2-184 (232)
46 1awc_B Protein (GA binding pro 100.0 3E-30 1E-34 176.1 14.8 144 24-183 2-145 (153)
47 3kea_A K1L; tropism, ANK repea 100.0 9.5E-31 3.3E-35 195.9 12.9 176 4-197 11-189 (285)
48 3f6q_A Integrin-linked protein 100.0 2.8E-30 9.4E-35 180.7 14.2 161 22-196 3-165 (179)
49 1n11_A Ankyrin; clathrin, BAND 100.0 6.2E-30 2.1E-34 201.8 17.8 114 56-179 272-385 (437)
50 3utm_A Tankyrase-1; tankyrase, 100.0 1.1E-29 3.8E-34 194.4 18.5 171 5-191 70-331 (351)
51 2fo1_E LIN-12 protein; beta-ba 100.0 3.8E-30 1.3E-34 199.4 15.7 178 9-193 149-370 (373)
52 1n11_A Ankyrin; clathrin, BAND 100.0 1E-29 3.4E-34 200.6 17.9 178 5-197 191-372 (437)
53 3ljn_A Hypothetical protein; a 100.0 6.5E-30 2.2E-34 197.3 16.5 175 5-196 32-238 (364)
54 3eu9_A Huntingtin-interacting 100.0 2.1E-29 7.1E-34 183.3 17.0 185 5-196 21-237 (240)
55 2fo1_E LIN-12 protein; beta-ba 100.0 1.2E-29 3.9E-34 196.7 15.3 151 39-196 148-340 (373)
56 1s70_B 130 kDa myosin-binding 100.0 5.9E-29 2E-33 186.9 17.9 169 22-198 38-261 (299)
57 1ikn_D Protein (I-kappa-B-alph 100.0 1.6E-30 5.3E-35 189.5 9.0 173 19-196 3-178 (236)
58 1bd8_A P19INK4D CDK4/6 inhibit 100.0 2.8E-29 9.6E-34 171.6 14.4 150 24-189 2-153 (156)
59 1bi7_B P16INK4A, MTS1, multipl 100.0 6.3E-30 2.2E-34 175.1 10.8 145 19-179 7-152 (156)
60 3eu9_A Huntingtin-interacting 100.0 1.4E-28 4.9E-33 178.9 17.0 162 20-195 5-169 (240)
61 2etb_A Transient receptor pote 100.0 2.6E-29 9E-34 185.1 12.8 166 23-195 1-207 (256)
62 1ihb_A P18-INK4C(INK6), cyclin 100.0 1.5E-28 5.3E-33 168.9 15.5 143 5-163 17-162 (162)
63 2y1l_E Darpin-8.4; hydrolase-i 100.0 3.1E-28 1.1E-32 168.7 16.9 140 5-158 26-167 (169)
64 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.6E-29 5.4E-34 184.7 10.2 171 5-190 17-200 (239)
65 3hra_A Ankyrin repeat family p 100.0 3E-28 1E-32 173.0 16.6 162 22-197 3-173 (201)
66 2pnn_A Transient receptor pote 100.0 1.2E-28 3.9E-33 183.3 14.5 164 4-175 68-271 (273)
67 1d9s_A Cyclin-dependent kinase 100.0 1.2E-28 4.1E-33 165.0 13.1 131 17-163 5-136 (136)
68 3v31_A Ankyrin repeat family A 100.0 9.1E-28 3.1E-32 165.9 17.6 147 5-166 15-163 (167)
69 1awc_B Protein (GA binding pro 100.0 6.1E-28 2.1E-32 164.6 16.2 138 5-156 14-152 (153)
70 2vge_A RELA-associated inhibit 100.0 1.4E-29 4.8E-34 183.8 8.5 154 9-176 1-161 (229)
71 1ycs_B 53BP2, P53BP2; ankyrin 100.0 1.1E-28 3.7E-33 180.3 11.9 160 22-197 3-167 (239)
72 2rfm_A Putative ankyrin repeat 100.0 1.3E-27 4.4E-32 168.9 15.5 140 6-159 48-189 (192)
73 3f6q_A Integrin-linked protein 100.0 5.5E-28 1.9E-32 169.0 13.2 152 5-171 17-171 (179)
74 4g8k_A 2-5A-dependent ribonucl 100.0 3.1E-27 1.1E-31 180.5 16.6 173 5-196 137-328 (337)
75 3jxi_A Vanilloid receptor-rela 100.0 2E-27 6.8E-32 175.3 14.4 155 5-167 61-254 (260)
76 1n0r_A 4ANK, 4 ankyrin repeats 99.9 9E-27 3.1E-31 153.3 14.9 126 23-163 1-126 (126)
77 1bd8_A P19INK4D CDK4/6 inhibit 99.9 1.8E-26 6E-31 157.7 15.7 138 5-158 14-154 (156)
78 2jab_A H10-2-G3; HER2, darpin, 99.9 1E-26 3.5E-31 155.5 14.0 124 21-158 11-134 (136)
79 3twr_A Tankyrase-2; ankyrin re 99.9 5.8E-27 2E-31 161.6 12.8 142 5-162 20-164 (165)
80 3t8k_A Uncharacterized protein 99.9 1.1E-27 3.6E-32 168.5 7.5 151 24-189 6-174 (186)
81 1d9s_A Cyclin-dependent kinase 99.9 6.5E-27 2.2E-31 156.5 9.2 129 54-193 4-135 (136)
82 1sw6_A Regulatory protein SWI6 99.9 6.7E-27 2.3E-31 178.2 9.8 180 4-198 58-312 (327)
83 3t8k_A Uncharacterized protein 99.9 1.3E-26 4.4E-31 163.0 10.1 148 7-168 20-184 (186)
84 2vge_A RELA-associated inhibit 99.9 1E-28 3.6E-33 179.2 -1.2 160 5-182 33-199 (229)
85 4hbd_A KN motif and ankyrin re 99.9 9.4E-26 3.2E-30 168.0 14.5 143 5-161 123-274 (276)
86 2b0o_E UPLC1; arfgap, structur 99.9 1.7E-25 5.9E-30 168.4 15.4 139 23-182 150-297 (301)
87 3c5r_A BARD-1, BRCA1-associate 99.9 1.1E-25 3.8E-30 150.6 10.4 114 57-180 5-118 (137)
88 3ehr_A Osteoclast-stimulating 99.9 5.4E-26 1.8E-30 164.0 9.0 137 21-172 70-207 (222)
89 3c5r_A BARD-1, BRCA1-associate 99.9 3.7E-26 1.3E-30 152.9 7.6 126 19-158 5-130 (137)
90 2jab_A H10-2-G3; HER2, darpin, 99.9 2.9E-25 1E-29 148.4 11.1 125 58-192 10-136 (136)
91 1n0r_A 4ANK, 4 ankyrin repeats 99.9 1.9E-24 6.4E-29 142.1 12.9 123 61-193 1-125 (126)
92 3aaa_C Myotrophin, protein V-1 99.9 6E-25 2E-29 144.4 10.2 113 21-147 4-116 (123)
93 3aaa_C Myotrophin, protein V-1 99.9 1.8E-24 6.2E-29 142.1 11.8 111 59-179 4-114 (123)
94 1bi7_B P16INK4A, MTS1, multipl 99.9 9E-25 3.1E-29 149.4 8.9 132 55-197 5-139 (156)
95 3deo_A Signal recognition part 99.9 6.1E-25 2.1E-29 154.0 6.7 112 21-147 41-153 (183)
96 3jue_A Arfgap with coiled-coil 99.9 1.9E-23 6.6E-28 160.9 14.1 144 21-179 196-345 (368)
97 3ehr_A Osteoclast-stimulating 99.9 3.4E-24 1.2E-28 154.6 9.2 134 55-198 66-202 (222)
98 3lvq_E ARF-GAP with SH3 domain 99.9 2.8E-23 9.4E-28 166.5 15.3 139 24-177 132-279 (497)
99 3ui2_A Signal recognition part 99.9 8.3E-24 2.8E-28 154.8 11.1 110 22-146 43-153 (244)
100 2aja_A Ankyrin repeat family p 99.9 3.1E-25 1.1E-29 171.4 1.1 154 23-194 91-250 (376)
101 1dcq_A PYK2-associated protein 99.9 2.6E-22 8.9E-27 149.5 15.6 130 24-163 130-263 (278)
102 3deo_A Signal recognition part 99.9 3.7E-23 1.3E-27 144.9 10.2 111 59-180 41-152 (183)
103 1n0q_A 3ANK, 3 ankyrin repeats 99.9 1.9E-22 6.4E-27 126.0 10.9 93 23-122 1-93 (93)
104 2aja_A Ankyrin repeat family p 99.9 2.5E-24 8.7E-29 166.3 1.7 153 5-181 104-264 (376)
105 3ui2_A Signal recognition part 99.9 1.3E-22 4.3E-27 148.5 9.7 139 22-179 13-152 (244)
106 1n0q_A 3ANK, 3 ankyrin repeats 99.9 7.8E-22 2.7E-26 123.1 11.3 93 61-163 1-93 (93)
107 2b0o_E UPLC1; arfgap, structur 99.9 2E-22 6.7E-27 151.8 9.7 125 6-150 164-299 (301)
108 2l6b_A NR1C; ankyrin, consensu 99.9 1.7E-22 5.9E-27 131.0 7.9 109 57-175 4-112 (115)
109 2l6b_A NR1C; ankyrin, consensu 99.9 2.4E-22 8.2E-27 130.3 7.1 110 18-141 3-112 (115)
110 1dcq_A PYK2-associated protein 99.9 4.8E-21 1.7E-25 142.6 13.2 169 20-197 62-266 (278)
111 3jue_A Arfgap with coiled-coil 99.8 6.6E-21 2.3E-25 146.8 11.3 124 60-193 197-325 (368)
112 3lvq_E ARF-GAP with SH3 domain 99.8 2.2E-20 7.5E-25 149.7 12.6 114 5-125 144-268 (497)
113 2zgd_A 3 repeat synthetic anky 99.8 7.7E-19 2.6E-23 112.8 9.6 90 58-156 20-109 (110)
114 2zgd_A 3 repeat synthetic anky 99.8 1E-18 3.5E-23 112.2 10.1 90 20-116 20-109 (110)
115 4g26_A Pentatricopeptide repea 64.7 21 0.00071 28.4 6.8 135 4-160 44-201 (501)
116 1gp8_A Protein (scaffolding pr 45.8 18 0.00062 17.5 2.2 18 28-45 17-34 (40)
117 4g26_A Pentatricopeptide repea 41.1 23 0.00077 28.2 3.5 106 4-117 88-198 (501)
118 3zrh_A Ubiquitin thioesterase 39.0 84 0.0029 24.5 6.0 54 31-85 29-91 (454)
119 3qil_A Clathrin heavy chain 1; 32.8 14 0.00049 23.2 0.9 44 133-179 31-74 (125)
No 1
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=100.00 E-value=2.1e-35 Score=219.39 Aligned_cols=170 Identities=21% Similarity=0.202 Sum_probs=149.2
Q ss_pred HHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 6 IEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 6 ~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
..+++.|++.|+++ .+.+|.||||+|+..|+.+++++|++.|++ ++..+..|.||+++|+..++ .+++++|+
T Consensus 66 ~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~-----~~~~~~~g~t~l~~a~~~~~-~~~~~~Ll 139 (269)
T 4b93_B 66 QKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGAN-----AGARNADQAVPLHLACQQGH-FQVVKCLL 139 (269)
T ss_dssp ---------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHHTC-HHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCC-----cCccCCCCCCccccccccCh-HHHHHHHH
Confidence 35678899999876 477899999999999999999999997776 78899999999999999999 89999999
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchh
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYL 163 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~ 163 (204)
+.++ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++ .|++
T Consensus 140 ~~g~-~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~-------~~~~g~t~Lh~A~~~g~~~~v~~Ll~-~Gad 210 (269)
T 4b93_B 140 DSNA-KPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA-------SNNKGNTALHEAVIEKHVFVVELLLL-HGAS 210 (269)
T ss_dssp HTTC-CSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTC-------BCTTSCBHHHHHHHTTCHHHHHHHHH-TTCC
T ss_pred HCCC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCc-------cccCCCcHHHHHHHcCCHHHHHHHHH-CCCC
Confidence 9998 8999999999999999999999999999999999886 68999999999999999999999999 6999
Q ss_pred hcccCCCCCCHhHHhccCCcchhhhhh
Q 037875 164 IGEKDMDGMTALQLLSCKPEAFKLKQE 190 (204)
Q Consensus 164 ~~~~~~~g~t~l~~a~~~~~~~~~~~~ 190 (204)
++.+|..|.|||++|+.++++.+++..
T Consensus 211 ~~~~d~~G~TpL~~A~~~~~i~~lL~~ 237 (269)
T 4b93_B 211 VQVLNKRQRTAVDCAEQNSKIMELLQV 237 (269)
T ss_dssp SCCCCTTSCCSGGGSCTTCHHHHHTTC
T ss_pred CCCcCCCCCCHHHHHHhCCcHHHHHHH
Confidence 999999999999999988877665433
No 2
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=1.6e-34 Score=200.31 Aligned_cols=154 Identities=25% Similarity=0.307 Sum_probs=139.7
Q ss_pred hHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHH
Q 037875 26 TVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSA 105 (204)
Q Consensus 26 ~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~ 105 (204)
+.|+.||..|+.++|+.|++.|++ +|.++..|.||||+|+..++ .+++++|+..++ +++.++..|.||||+|+
T Consensus 6 ~~L~~Aa~~G~~~~v~~Ll~~Gad-----vn~~d~~g~t~l~~a~~~~~-~~~~~~ll~~ga-d~~~~d~~g~TpLh~A~ 78 (169)
T 4gpm_A 6 KRLIEAAENGNKDRVKDLIENGAD-----VNASDSDGRTPLHHAAENGH-KEVVKLLISKGA-DVNAKDSDGRTPLHHAA 78 (169)
T ss_dssp HHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTSCCHHHHHH
T ss_pred HHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHHcCC-HHHHHHHHhccc-chhhhccCCCCHHHHHH
Confidence 469999999999999999997766 88999999999999999999 899999999998 89999999999999999
Q ss_pred HcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc--CCc
Q 037875 106 RYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC--KPE 183 (204)
Q Consensus 106 ~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~--~~~ 183 (204)
..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+. +.+
T Consensus 79 ~~g~~~~v~~Ll~~gadvn~-------~d~~G~TpLh~A~~~g~~~~v~~Ll~-~gad~~~~d~~G~TpL~~A~~~g~~~ 150 (169)
T 4gpm_A 79 ENGHKEVVKLLISKGADVNA-------KDSDGRTPLHHAAENGHKEVVKLLIS-KGADVNTSDSDGRTPLDLAREHGNEE 150 (169)
T ss_dssp HTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred HcCCHHHHHHHHHCcCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCCHH
Confidence 99999999999999998887 68899999999999999999999999 699999999999999999985 457
Q ss_pred chhhhhhccch
Q 037875 184 AFKLKQERGFF 194 (204)
Q Consensus 184 ~~~~~~~~g~~ 194 (204)
+.+++++.|+.
T Consensus 151 iv~~Ll~~GA~ 161 (169)
T 4gpm_A 151 VVKLLEKQGGW 161 (169)
T ss_dssp HHHHHHTC---
T ss_pred HHHHHHHCCCC
Confidence 88888888864
No 3
>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A
Probab=100.00 E-value=5.9e-33 Score=192.45 Aligned_cols=148 Identities=20% Similarity=0.251 Sum_probs=132.4
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
-+++++.|+++|++++ +..|.||||+|+..++.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|
T Consensus 16 ~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad-----~~~~d~~g~TpLh~A~~~g~-~~~v~~L 89 (169)
T 4gpm_A 16 NKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGAD-----VNAKDSDGRTPLHHAAENGH-KEVVKLL 89 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc-----hhhhccCCCCHHHHHHHcCC-HHHHHHH
Confidence 4689999999998764 77899999999999999999999997776 88999999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.|+ +++.++..|+||||+|+..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++ .|+
T Consensus 90 l~~ga-dvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-------~d~~G~TpL~~A~~~g~~~iv~~Ll~-~GA 160 (169)
T 4gpm_A 90 ISKGA-DVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNT-------SDSDGRTPLDLAREHGNEEVVKLLEK-QGG 160 (169)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHT-C--
T ss_pred HHCcC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-------cCCCCCCHHHHHHHcCCHHHHHHHHH-CCC
Confidence 99998 8999999999999999999999999999999999887 68999999999999999999999998 699
Q ss_pred hhccc
Q 037875 163 LIGEK 167 (204)
Q Consensus 163 ~~~~~ 167 (204)
+++..
T Consensus 161 ~ie~~ 165 (169)
T 4gpm_A 161 WLEHH 165 (169)
T ss_dssp -----
T ss_pred CcCCC
Confidence 98764
No 4
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.3e-33 Score=205.77 Aligned_cols=179 Identities=22% Similarity=0.221 Sum_probs=132.8
Q ss_pred HHHHHHHHhhhcccccc---ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHH
Q 037875 4 KVIEVCRKISDHALHVL---TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVAD 80 (204)
Q Consensus 4 ~~~~~~~~l~~~~~~~~---~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ 80 (204)
...+++++|+++|.++. +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .++++
T Consensus 34 ~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~ 107 (253)
T 1yyh_A 34 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-----ANIQDNMGRTPLHAAVSADA-QGVFQ 107 (253)
T ss_dssp ------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTC-HHHHH
T ss_pred CChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHH
Confidence 46788888998887763 56789999999999999999999997665 77788888888888888888 88888
Q ss_pred HHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHh
Q 037875 81 KLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEY 160 (204)
Q Consensus 81 ~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 160 (204)
+|++.+..+++..+..|.||||+|+..|+.+++++|++.|++++. ++..|+||||+|+..|+.+++++|++ .
T Consensus 108 ~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ 179 (253)
T 1yyh_A 108 ILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-------VDDLGKSALHWAAAVNNVDAAVVLLK-N 179 (253)
T ss_dssp HHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTC-------BCTTSCBHHHHHHHHTCHHHHHHHHH-T
T ss_pred HHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHH-c
Confidence 888887667777888888888888888888888888888887776 57778888888888888888888887 5
Q ss_pred chhhcccCCCCCCHhHHhc--cCCcchhhhhhccchhh
Q 037875 161 KYLIGEKDMDGMTALQLLS--CKPEAFKLKQERGFFKK 196 (204)
Q Consensus 161 g~~~~~~~~~g~t~l~~a~--~~~~~~~~~~~~g~~~~ 196 (204)
|++++.++..|.||||+|+ .+.++.+.+++.|....
T Consensus 180 ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~ 217 (253)
T 1yyh_A 180 GANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD 217 (253)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTT
T ss_pred CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcc
Confidence 8888888888888888887 44567777777776543
No 5
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=100.00 E-value=7.6e-33 Score=195.77 Aligned_cols=165 Identities=22% Similarity=0.252 Sum_probs=148.7
Q ss_pred hhccccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCcccc
Q 037875 13 SDHALHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGM 92 (204)
Q Consensus 13 ~~~~~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~ 92 (204)
++...+..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|++.++ +++.
T Consensus 24 ~~~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~ 96 (192)
T 2rfm_A 24 LDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK-----LEDKDIEGSTALIWAVKNNR-LGIAEKLLSKGS-NVNT 96 (192)
T ss_dssp HHHHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHTC-CTTC
T ss_pred hHHHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccc-----cccccccCccHHHHHHHcCC-HHHHHHHHHCCC-CCCC
Confidence 3334566788999999999999999999999996655 88899999999999999999 999999999998 8999
Q ss_pred ccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCC
Q 037875 93 RNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGM 172 (204)
Q Consensus 93 ~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~ 172 (204)
.+..|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++++.+|..|.
T Consensus 97 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~ 168 (192)
T 2rfm_A 97 KDFSGKTPLMWSIIFGYSEMSYFLLEHGANVND-------RNLEGETPLIVASKYGRSEIVKKLLE-LGADISARDLTGL 168 (192)
T ss_dssp CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSC-------CCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCTTCBCTTSC
T ss_pred CCCCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCC
Confidence 999999999999999999999999999998876 58899999999999999999999999 6999999999999
Q ss_pred CHhHHhccC--Ccchhhhhhcc
Q 037875 173 TALQLLSCK--PEAFKLKQERG 192 (204)
Q Consensus 173 t~l~~a~~~--~~~~~~~~~~g 192 (204)
||+++|+.. .++.+.+++.|
T Consensus 169 t~l~~A~~~~~~~~v~~Ll~~~ 190 (192)
T 2rfm_A 169 TAEASARIFGRQEVIKIFTEVR 190 (192)
T ss_dssp BHHHHHHHTTCHHHHHHHHHHH
T ss_pred CHHHHHHHhCcHHHHHHHHhcc
Confidence 999999854 46666666544
No 6
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=100.00 E-value=8.5e-33 Score=206.00 Aligned_cols=178 Identities=21% Similarity=0.174 Sum_probs=156.6
Q ss_pred HHHHHHHhhhcccc-----ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHH
Q 037875 5 VIEVCRKISDHALH-----VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVA 79 (204)
Q Consensus 5 ~~~~~~~l~~~~~~-----~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~ 79 (204)
..+++++|+++|.+ ..+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++
T Consensus 21 ~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~g~tpL~~A~~~~~-~~~v 94 (282)
T 1oy3_D 21 HEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG-----VLVAERGGHTALHLACRVRA-HTCA 94 (282)
T ss_dssp CHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----SSCCCTTSCCHHHHHTTTTC-HHHH
T ss_pred CHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCC-cchh
Confidence 46789999998865 4567899999999999999999999997766 78899999999999999999 8999
Q ss_pred HHHHhhCCC----------------------------------------------ccccccCCCCcHHHHHHHcCCHHHH
Q 037875 80 DKLLRKAPG----------------------------------------------LLGMRNNNGETALFRSARYGKADIF 113 (204)
Q Consensus 80 ~~Ll~~~~~----------------------------------------------~~~~~~~~~~t~l~~a~~~~~~~~~ 113 (204)
++|++.++. +++..+..|.||||+|+..|+.+++
T Consensus 95 ~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v 174 (282)
T 1oy3_D 95 CVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMV 174 (282)
T ss_dssp HHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHH
T ss_pred HhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHH
Confidence 999987652 2566788899999999999999999
Q ss_pred HHHHhcccCCCCCCCCccccC-CCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhh
Q 037875 114 NFLAGKIADYDQPSKQPFLQR-NDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQE 190 (204)
Q Consensus 114 ~~L~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~ 190 (204)
++|+++|++++.. + ..|+||||+|+..|+.+++++|++ .|++++.++..|.||||+|+.. .++.+.+++
T Consensus 175 ~~Ll~~g~~~~~~-------~~~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~ 246 (282)
T 1oy3_D 175 RLLRDAGADLNKP-------EPTCGRTPLHLAVEAQAASVLELLLK-AGADPTARMYGGRTPLGSALLRPNPILARLLRA 246 (282)
T ss_dssp HHHHHHTCCTTCC-------CTTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHTSSCHHHHHHHHH
T ss_pred HHHHHcCCCCCCC-------CCCCCcCHHHHHHHcCCHHHHHHHHH-cCCCCcccccCCCCHHHHHHHcCCcHHHHHHHH
Confidence 9999999998873 4 459999999999999999999999 6999999999999999999854 578888888
Q ss_pred ccchhh
Q 037875 191 RGFFKK 196 (204)
Q Consensus 191 ~g~~~~ 196 (204)
.|+...
T Consensus 247 ~ga~~~ 252 (282)
T 1oy3_D 247 HGAPEP 252 (282)
T ss_dssp TTCCCC
T ss_pred cCCCcC
Confidence 887654
No 7
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=2.7e-32 Score=197.01 Aligned_cols=175 Identities=16% Similarity=0.125 Sum_probs=116.4
Q ss_pred HHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 6 IEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 6 ~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
.+++++|+++|.++ .+..|.||||+|+..|+.+++++|++.++. .++..+..|.||||+|+..++ .+++++|+
T Consensus 38 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----~~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll 112 (223)
T 2f8y_A 38 SDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT----DLDARMHDGTTPLILAARLAV-EGMLEDLI 112 (223)
T ss_dssp HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHBTTS----CTTCCCTTCCCHHHHHHHHTC-HHHHHHHH
T ss_pred HHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CcccCCCCCCcHHHHHHHhCc-HHHHHHHH
Confidence 45666666666554 345566677777766666677766665442 255666667777777777776 67777777
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchh
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYL 163 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~ 163 (204)
+.+. +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++
T Consensus 113 ~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~ 183 (223)
T 2f8y_A 113 NSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM-------QNNREETPLFLAAREGSYETAKVLLD-HFAN 183 (223)
T ss_dssp HTTC-CTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTCCCHHHHHHHHTCHHHHHHHHH-TTCC
T ss_pred HcCC-CCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCcCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 7665 5666666677777777777777777777777666555 46667777777777777777777776 4777
Q ss_pred hcccCCCCCCHhHHhccC--Ccchhhhhhccch
Q 037875 164 IGEKDMDGMTALQLLSCK--PEAFKLKQERGFF 194 (204)
Q Consensus 164 ~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~ 194 (204)
++.++..|.||+++|+.. .++.+.+++.|+.
T Consensus 184 ~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~ 216 (223)
T 2f8y_A 184 RDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216 (223)
T ss_dssp TTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCS
T ss_pred CccccccCCCHHHHHHHhcchHHHHHHHHcCCC
Confidence 777777777777777633 3566666666654
No 8
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=100.00 E-value=2.7e-32 Score=198.22 Aligned_cols=181 Identities=22% Similarity=0.272 Sum_probs=157.7
Q ss_pred HHHHHHHhhhc-cccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 5 VIEVCRKISDH-ALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 5 ~~~~~~~l~~~-~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
..+++++|++. |.++ .+..|.||||+|+..|+.+++++|++.|++......+..+..|.||||+|+..++ .+++++
T Consensus 15 ~~~~v~~Ll~~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~ 93 (232)
T 2rfa_A 15 DVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMTSELYEGQTALHIAVINQN-VNLVRA 93 (232)
T ss_dssp CHHHHHHHHTTTCSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCCCCSTTTTTCCHHHHHHHTTC-HHHHHH
T ss_pred CHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCchhccccccccCCCCcCHHHHHHHcCC-HHHHHH
Confidence 46789999987 7665 4778999999999999999999999988874333346778899999999999999 999999
Q ss_pred HHhhCCCccccccC-------------CCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhC
Q 037875 82 LLRKAPGLLGMRNN-------------NGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQ 148 (204)
Q Consensus 82 Ll~~~~~~~~~~~~-------------~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~ 148 (204)
|++.++ +++..+. .|.||||+|+..|+.+++++|+++|++++. +|..|+||||+|+..+
T Consensus 94 Ll~~g~-~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~d~~g~t~L~~A~~~~ 165 (232)
T 2rfa_A 94 LLARGA-SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRA-------QDSLGNTVLHILILQP 165 (232)
T ss_dssp HHHTTC-CTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHTCS
T ss_pred HHhCCC-CCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------CCCCCCCHHHHHHHcC
Confidence 999987 6776654 799999999999999999999999999887 6899999999999999
Q ss_pred CHHHH----HHHHHHhchhh------cccCCCCCCHhHHhc--cCCcchhhhhhccchh
Q 037875 149 HFELA----LEIAKEYKYLI------GEKDMDGMTALQLLS--CKPEAFKLKQERGFFK 195 (204)
Q Consensus 149 ~~~~~----~~Ll~~~g~~~------~~~~~~g~t~l~~a~--~~~~~~~~~~~~g~~~ 195 (204)
+.+++ ++|++ .|++. +.+|..|.|||++|+ .+.++++.+++.|...
T Consensus 166 ~~~~~~~i~~~Ll~-~g~~~~~~~~~~~~~~~g~tpl~~A~~~g~~~~v~~Ll~~g~~~ 223 (232)
T 2rfa_A 166 NKTFACQMYNLLLS-YDGGDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223 (232)
T ss_dssp CHHHHHHHHHHHHH-TTCSCSSCCGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHC
T ss_pred ChHHHHHHHHHHHh-cCCchhhhhhhccCCCCCCCHHHHHHHcCCHHHHHHHHhcCccc
Confidence 99988 88888 69888 689999999999998 4567888888877544
No 9
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=2.1e-32 Score=202.33 Aligned_cols=171 Identities=18% Similarity=0.116 Sum_probs=113.1
Q ss_pred HHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHh
Q 037875 7 EVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLR 84 (204)
Q Consensus 7 ~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~ 84 (204)
+++++|+++|.+++ +..|.||||+|+..|+.+++++|++.|++ ++ .+..|.||||+|+..++ .+++++|++
T Consensus 50 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~-~~~v~~Ll~ 122 (261)
T 2xai_A 50 SCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGAS-----VQ-PESDLASPIHEAARRGH-VECVNSLIA 122 (261)
T ss_dssp HHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----SS-CSCTTCCHHHHHHHTTC-HHHHHHHHH
T ss_pred HHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CC-CCCCCCCHHHHHHHcCc-HHHHHHHHH
Confidence 44444444444332 33444555555555555555555554433 22 12345666666666666 566666666
Q ss_pred hCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhh
Q 037875 85 KAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLI 164 (204)
Q Consensus 85 ~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~ 164 (204)
.++ +++..+..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..++.+++++|++ .|+++
T Consensus 123 ~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--------~~~g~t~Lh~A~~~~~~~~v~~Ll~-~gad~ 192 (261)
T 2xai_A 123 YGG-NIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ--------GKGQDSPLHAVARTASEELACLLMD-FGADT 192 (261)
T ss_dssp TTC-CTTCCBTTTBCHHHHHHHTTCHHHHHHHHHHTCCTTC--------CBTTBCHHHHHHHHTCHHHHHHHHH-TTCCT
T ss_pred cCC-CCCcCCCCCCCHHHHHHHhCCHHHHHHHHHcCCCCCC--------CCCCCChHHHHHHcCCHHHHHHHHH-cCCCC
Confidence 665 5666666777777777777777777777777776663 6678888888888888888888888 58899
Q ss_pred cccCCCCCCHhHHhccCCcchhhhhhccch
Q 037875 165 GEKDMDGMTALQLLSCKPEAFKLKQERGFF 194 (204)
Q Consensus 165 ~~~~~~g~t~l~~a~~~~~~~~~~~~~g~~ 194 (204)
+.+|..|.||+++|+.+.++.+.+++.+..
T Consensus 193 ~~~d~~g~tpl~~A~~~~~~~~~ll~~~~~ 222 (261)
T 2xai_A 193 QAKNAEGKRPVELVPPESPLAQLFLEREGP 222 (261)
T ss_dssp TCCCTTSCCGGGGSCTTCTHHHHHHHC-CC
T ss_pred CCcCCCCCChhhhccccccHHHHHHhccCC
Confidence 988899999999998888888777776543
No 10
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=2e-32 Score=198.72 Aligned_cols=174 Identities=21% Similarity=0.192 Sum_probs=111.9
Q ss_pred HHHHHHhhhccc---cccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 6 IEVCRKISDHAL---HVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 6 ~~~~~~l~~~~~---~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
++.++.+++.+. +..+..|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||+|+..++ .+++++|
T Consensus 19 ~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~L 92 (231)
T 3aji_A 19 LDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP-----VNDKDDAGWSPLHIAASAGX-DEIVKAL 92 (231)
T ss_dssp HHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHHHHHTC-HHHHHHH
T ss_pred HHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCC-----CCCcCCCCCCHHHHHHHcCH-HHHHHHH
Confidence 455666665543 23455667777777777777777777775544 56666667777777777766 6677777
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.+. +++..+..|.||||+|+..++.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++ .|+
T Consensus 93 l~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~ 163 (231)
T 3aji_A 93 LVKGA-HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDA-------KDHYDATAMHRAAAKGNLKMVHILLF-YKA 163 (231)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHHHHH-TTC
T ss_pred HHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCcHHHHHHHcCCHHHHHHHHh-cCC
Confidence 76665 5666666667777777777777777777766666554 35566666666666666666666666 466
Q ss_pred hhcccCCCCCCHhHHhccC--Ccchhhhhhccch
Q 037875 163 LIGEKDMDGMTALQLLSCK--PEAFKLKQERGFF 194 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~ 194 (204)
+++.++..|.||||+|+.. .++.+.+++.|..
T Consensus 164 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~ 197 (231)
T 3aji_A 164 STNIQDTEGNTPLHLACDEERVEEAKFLVTQGAS 197 (231)
T ss_dssp CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred CccccCCCCCCHHHHHHHCCCHHHHHHHHHCCCC
Confidence 6666666666666666533 3555555555544
No 11
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=100.00 E-value=3.6e-32 Score=193.38 Aligned_cols=173 Identities=20% Similarity=0.173 Sum_probs=153.2
Q ss_pred HHHHHHhhhccc-c--ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 6 IEVCRKISDHAL-H--VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 6 ~~~~~~l~~~~~-~--~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
.+.++.++..+. + ..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|
T Consensus 18 ~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~~~~~-~~~~~~L 91 (201)
T 3hra_A 18 TKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD-----INLQNSISDSPYLYAGAQGR-TEILAYM 91 (201)
T ss_dssp HHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHH
T ss_pred HHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 567777777764 4 4577899999999999999999999997766 88899999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcc-cCCCCCCCCccccCCCCccHHHHHHHhCC-----HHHHHHH
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKI-ADYDQPSKQPFLQRNDQSTVLHMAVISQH-----FELALEI 156 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~g~t~l~~a~~~~~-----~~~~~~L 156 (204)
++.+..+++..+..|.||||+|+..|+.+++++|++.| ++++. ++..|+||||+|+..+. .+++++|
T Consensus 92 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-------~~~~g~t~L~~A~~~~~~~~~~~~~v~~L 164 (201)
T 3hra_A 92 LKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDF-------QNDFGYTALIEAVGLREGNQLYQDIVKLL 164 (201)
T ss_dssp HHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTC-------CCTTSCCHHHHHHHSSCCSHHHHHHHHHH
T ss_pred HhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCC-------CCCCCCCHHHHHHHhccchhhHHHHHHHH
Confidence 97666688899999999999999999999999999998 77776 58899999999999998 9999999
Q ss_pred HHHhchhhcccCCCCCCHhHHhcc--CCcchhhhhhcc
Q 037875 157 AKEYKYLIGEKDMDGMTALQLLSC--KPEAFKLKQERG 192 (204)
Q Consensus 157 l~~~g~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g 192 (204)
++ .|++++.+|..|.|||++|+. +.++.+.+++.|
T Consensus 165 l~-~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~G 201 (201)
T 3hra_A 165 ME-NGADQSIKDNSGRTAMDYANQKGYTEISKILAQYN 201 (201)
T ss_dssp HH-TTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred HH-CCCCCCccCCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence 99 699999999999999999984 457777776654
No 12
>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A
Probab=100.00 E-value=8.9e-33 Score=199.52 Aligned_cols=179 Identities=22% Similarity=0.225 Sum_probs=160.3
Q ss_pred HHHHHHHhhhcccccc---ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 5 VIEVCRKISDHALHVL---TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~---~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
.++++++|+++|.++. +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++
T Consensus 3 ~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~ 76 (223)
T 2f8y_A 3 APAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD-----ANIQDNMGRTPLHAAVSADA-QGVFQI 76 (223)
T ss_dssp --CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHH
T ss_pred cHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCC-HHHHHH
Confidence 3567788999998764 56899999999999999999999997766 78899999999999999999 999999
Q ss_pred HHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc
Q 037875 82 LLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK 161 (204)
Q Consensus 82 Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g 161 (204)
|++.++.+++..+..|.||||+|+..++.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++ .|
T Consensus 77 Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g 148 (223)
T 2f8y_A 77 LIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-------VDDLGKSALHWAAAVNNVDAAVVLLK-NG 148 (223)
T ss_dssp HHHBTTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-------BCTTSCBHHHHHHHTTCHHHHHHHHH-TT
T ss_pred HHHcCCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcC-------cCCCCCcHHHHHHHcCCHHHHHHHHH-cC
Confidence 99998767888899999999999999999999999999998876 58899999999999999999999999 59
Q ss_pred hhhcccCCCCCCHhHHhcc--CCcchhhhhhccchhhh
Q 037875 162 YLIGEKDMDGMTALQLLSC--KPEAFKLKQERGFFKKL 197 (204)
Q Consensus 162 ~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g~~~~~ 197 (204)
++++.++..|.||||+|+. +.++.+.+++.|.....
T Consensus 149 ~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 186 (223)
T 2f8y_A 149 ANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI 186 (223)
T ss_dssp CCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcc
Confidence 9999999999999999984 55788888888765543
No 13
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=100.00 E-value=1.9e-32 Score=205.06 Aligned_cols=177 Identities=12% Similarity=0.131 Sum_probs=150.6
Q ss_pred HHHHHHHhhhccccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHh
Q 037875 5 VIEVCRKISDHALHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLR 84 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~ 84 (204)
..+++++|+++|.+++..+|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|++
T Consensus 43 ~~~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~ 116 (285)
T 3kea_A 43 NVRLVCTLLNAGALKNLLENEFPLHQAATLEDTKIVKILLFSGLD-----DSQFDDKGNTALYYAVDSGN-MQTVKLFVK 116 (285)
T ss_dssp CHHHHHHHHHTTGGGSCCTTCCHHHHHTTSSSCHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHH
T ss_pred CHHHHHHHHhCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCCCCcHHHHHHHcCC-HHHHHHHHh
Confidence 467888888888888777888888888888888888888886665 77888889999999999998 899999999
Q ss_pred hCCCccccccCCC-CcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchh
Q 037875 85 KAPGLLGMRNNNG-ETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYL 163 (204)
Q Consensus 85 ~~~~~~~~~~~~~-~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~ 163 (204)
.++ +++..+..| .||||+|+..|+.+++++|+++|++... ...|.||||+|+..|+.+++++|++ .|++
T Consensus 117 ~ga-~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--------~~~g~t~L~~A~~~g~~~~v~~Ll~-~gad 186 (285)
T 3kea_A 117 KNW-RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFD--------LAILLSCIHITIKNGHVDMMILLLD-YMTS 186 (285)
T ss_dssp HCG-GGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCC--------CSTHHHHHHHHHHTTCHHHHHHHHH-HHHH
T ss_pred cCC-CCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCcccc--------ccCCccHHHHHHHcChHHHHHHHHH-cCCC
Confidence 887 788888888 7999999999999999999998876532 2379999999999999999999999 5999
Q ss_pred hcccCCCCCCH-hHHhc--cCCcchhhhhhccchhhh
Q 037875 164 IGEKDMDGMTA-LQLLS--CKPEAFKLKQERGFFKKL 197 (204)
Q Consensus 164 ~~~~~~~g~t~-l~~a~--~~~~~~~~~~~~g~~~~~ 197 (204)
++.++..|.|| ||+|+ .+.++.+.+++.|+....
T Consensus 187 ~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~ 223 (285)
T 3kea_A 187 TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS 223 (285)
T ss_dssp TCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTT
T ss_pred CCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 99999999998 99998 455788888888876543
No 14
>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A
Probab=100.00 E-value=3.8e-32 Score=200.09 Aligned_cols=173 Identities=16% Similarity=0.105 Sum_probs=155.7
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|+++|.+++ +..|.||||+|+..|+.+++++|++.++. .++..+..|.||||+|+..++ .+++++|
T Consensus 69 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~----~~~~~~~~g~t~L~~A~~~~~-~~~v~~L 143 (253)
T 1yyh_A 69 RSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRAT----DLDARMHDGTTPLILAARLAV-EGMLEDL 143 (253)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTS----CTTCCCTTCCCHHHHHHHHTC-SSHHHHH
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC----CccccCCCCCcHHHHHHHcCh-HHHHHHH
Confidence 4689999999998764 67899999999999999999999997652 378889999999999999999 8999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.++ +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|+
T Consensus 144 l~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~tpL~~A~~~~~~~~v~~Ll~-~ga 214 (253)
T 1yyh_A 144 INSHA-DVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDM-------QNNREETPLFLAAREGSYETAKVLLD-HFA 214 (253)
T ss_dssp HHTTC-CTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHHHHH-TTC
T ss_pred HHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHCCCHHHHHHHHH-cCC
Confidence 99998 8999999999999999999999999999999999886 58899999999999999999999999 699
Q ss_pred hhcccCCCCCCHhHHhccCC--cchhhhhhc
Q 037875 163 LIGEKDMDGMTALQLLSCKP--EAFKLKQER 191 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~~~~--~~~~~~~~~ 191 (204)
+++.+|..|.||+++|+.++ ++.+.+...
T Consensus 215 ~~~~~d~~g~tpl~~A~~~g~~~i~~~l~~~ 245 (253)
T 1yyh_A 215 NRDITDHMDRLPRDIAQERMHHDIVRLLDLE 245 (253)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred CccccccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence 99999999999999998654 565555443
No 15
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=100.00 E-value=2.5e-32 Score=201.22 Aligned_cols=181 Identities=19% Similarity=0.162 Sum_probs=155.5
Q ss_pred HHHHHHhhhcccccc------ccCCchHHHHHHhc---CChHHHHHHHhhCchhhhhh------hcccccCCCcHHHHHH
Q 037875 6 IEVCRKISDHALHVL------TVHDDTVLHMATYF---KRDDLALKLLDEIPELYIHK------MTRQNKAGNTVLHATA 70 (204)
Q Consensus 6 ~~~~~~l~~~~~~~~------~~~~~~~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~------~~~~~~~g~~~l~~a~ 70 (204)
..++++++++|.+++ +..|.||||+|+.. |+.+++++|++.|++..... ....+..|.||||+|+
T Consensus 19 ~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 98 (256)
T 2etb_A 19 TGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAI 98 (256)
T ss_dssp TTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHH
T ss_pred HHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHH
Confidence 357888999998764 56899999999999 99999999999777632111 1123467999999999
Q ss_pred hcCCCHHHHHHHHhhCCCccccccCC-------------CCcHHHHHHHcCCHHHHHHHHh---cccCCCCCCCCccccC
Q 037875 71 TSSRALPVADKLLRKAPGLLGMRNNN-------------GETALFRSARYGKADIFNFLAG---KIADYDQPSKQPFLQR 134 (204)
Q Consensus 71 ~~~~~~~~~~~Ll~~~~~~~~~~~~~-------------~~t~l~~a~~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~ 134 (204)
..++ .+++++|++.++ +++..+.. |.||||+|+..|+.+++++|++ .|++++. ++
T Consensus 99 ~~g~-~~~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~-------~d 169 (256)
T 2etb_A 99 EKRS-LQCVKLLVENGA-DVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEA-------TD 169 (256)
T ss_dssp HTTC-HHHHHHHHHTTC-CTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-------CC
T ss_pred HcCC-HHHHHHHHHcCC-CCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCc-------cC
Confidence 9999 999999999998 78888776 9999999999999999999999 8998887 68
Q ss_pred CCCccHHHHHHH--hCCHH-------HHHHHHHHhchhh-------cccCCCCCCHhHHhccC--Ccchhhhhhccchhh
Q 037875 135 NDQSTVLHMAVI--SQHFE-------LALEIAKEYKYLI-------GEKDMDGMTALQLLSCK--PEAFKLKQERGFFKK 196 (204)
Q Consensus 135 ~~g~t~l~~a~~--~~~~~-------~~~~Ll~~~g~~~-------~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~ 196 (204)
..|+||||+|+. .++.+ ++++|++ .|+++ +.+|..|.||||+|+.. .++.+.+++.|....
T Consensus 170 ~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~ 248 (256)
T 2etb_A 170 SLGNTVLHALVMIADNSPENSALVIHMYDGLLQ-MGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGA 248 (256)
T ss_dssp TTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCHHHHHHHcccCCchhhHHHHHHHHHHHH-cCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCC
Confidence 999999999999 78888 9999999 69999 99999999999999854 578888888886553
No 16
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=100.00 E-value=8.4e-32 Score=196.11 Aligned_cols=178 Identities=17% Similarity=0.224 Sum_probs=138.9
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
.++++++|+++|.+++ +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|
T Consensus 23 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~~~~L 96 (237)
T 3b7b_A 23 HVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGAL-----VDPKDAEGSTCLHLAAKKGH-YEVVQYL 96 (237)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCC-----CCCCCTTSCCHHHHHHHTTC-HHHHHHH
T ss_pred cHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCC-----CCCCCCCCCcHHHHHHHcCC-HHHHHHH
Confidence 3678888888887654 56788899999999999999999886665 67778888888888888888 7888888
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.+..+++..+..|.||||+|+..++.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++ .|+
T Consensus 97 l~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~~~~Ll~-~g~ 168 (237)
T 3b7b_A 97 LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINI-------RDNEENICLHWAAFSGCVDIAEILLA-AKC 168 (237)
T ss_dssp HTTTCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHCCHHHHHHHHT-TTC
T ss_pred HhCCCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCc-------cCCCCCCHHHHHHHCCCHHHHHHHHH-cCC
Confidence 8887447777788888888888888888888888888887665 46777788888888888888877777 577
Q ss_pred hhcccCCCCCCHhHHhccC--Ccchhhhhhccchhh
Q 037875 163 LIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKK 196 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~ 196 (204)
+++.++..|.||||+|+.. .++.+.+++.|....
T Consensus 169 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~ 204 (237)
T 3b7b_A 169 DLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT 204 (237)
T ss_dssp CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTT
T ss_pred CCCCcCCCCCCHHHHHHHhCCHhHHHHHHHcCCCCC
Confidence 8877777788888877643 356666666665543
No 17
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=1.2e-31 Score=194.17 Aligned_cols=177 Identities=18% Similarity=0.162 Sum_probs=123.5
Q ss_pred HHHHHHhhhccccc---cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcc-cccCCCcHHHHHHhcCCCHHHHHH
Q 037875 6 IEVCRKISDHALHV---LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTR-QNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 6 ~~~~~~l~~~~~~~---~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~-~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
.+++++|++.+.+. .+..|.||||+|+..|+.+++++|++.|+++. ++. .+..|.||||+|+..++ .+++++
T Consensus 15 ~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~---~~~~~~~~g~t~L~~A~~~~~-~~~~~~ 90 (228)
T 2dzn_A 15 FFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN---LDDYPDDSGWTPFHIACSVGN-LEVVKS 90 (228)
T ss_dssp HHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCC---GGGCCCTTSCCHHHHHHHHCC-HHHHHH
T ss_pred HHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhcccccc---ccccCCCCCCCHHHHHHHcCC-HHHHHH
Confidence 56777777777553 45667778888887777788888877663321 344 66677777777777777 777777
Q ss_pred HHhhC--CCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHH
Q 037875 82 LLRKA--PGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKE 159 (204)
Q Consensus 82 Ll~~~--~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 159 (204)
|++.+ . +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++
T Consensus 91 Ll~~g~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~- 161 (228)
T 2dzn_A 91 LYDRPLKP-DLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRI-------KDKFNQIPLHRAASVGSLKLIELLCG- 161 (228)
T ss_dssp HHSSSSCC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCC-------CCTTSCCHHHHHHHTTCHHHHHHHHT-
T ss_pred HHhCCCCc-ccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccc-------cCCCCCCHHHHHHHcCCHHHHHHHHh-
Confidence 77776 4 5666677777777777777777777777777777665 46667777777777777777777777
Q ss_pred hc-hhhcccCCCCCCHhHHhccC--Ccchhhhh-hccchh
Q 037875 160 YK-YLIGEKDMDGMTALQLLSCK--PEAFKLKQ-ERGFFK 195 (204)
Q Consensus 160 ~g-~~~~~~~~~g~t~l~~a~~~--~~~~~~~~-~~g~~~ 195 (204)
.| ++++.+|..|.||||+|+.. .++.+.++ +.|...
T Consensus 162 ~g~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~ 201 (228)
T 2dzn_A 162 LGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEY 201 (228)
T ss_dssp TTCCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCS
T ss_pred cCcccccCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCC
Confidence 45 77777777777777777633 35556665 555543
No 18
>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A
Probab=100.00 E-value=1.3e-31 Score=194.43 Aligned_cols=174 Identities=21% Similarity=0.160 Sum_probs=157.1
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|+++|.+++ +..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|
T Consensus 52 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~~~~L 125 (231)
T 3aji_A 52 HTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAH-----VNAVNQNGCTPLHYAASKNR-HEIAVML 125 (231)
T ss_dssp CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHH
T ss_pred cHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 4689999999998764 67799999999999999999999997766 78899999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.+. +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..++.+++++|++ .|+
T Consensus 126 l~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga 196 (231)
T 3aji_A 126 LEGGA-NPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI-------QDTEGNTPLHLACDEERVEEAKFLVT-QGA 196 (231)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTC
T ss_pred HHcCC-CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccc-------cCCCCCCHHHHHHHCCCHHHHHHHHH-CCC
Confidence 99998 8889999999999999999999999999999998876 58899999999999999999999999 699
Q ss_pred hhcccCCCCCCHhHHhccC--Ccchhhhhhccc
Q 037875 163 LIGEKDMDGMTALQLLSCK--PEAFKLKQERGF 193 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~ 193 (204)
+++.+|..|.||+++|... .++.+++.+.|+
T Consensus 197 ~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a 229 (231)
T 3aji_A 197 SIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA 229 (231)
T ss_dssp CSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence 9999999999999999743 456666665543
No 19
>2xai_A ASB-9, ankyrin repeat and SOCS box protein 9; transcription regulation, autoantibody; 2.58A {Homo sapiens}
Probab=100.00 E-value=1.4e-31 Score=198.04 Aligned_cols=176 Identities=15% Similarity=0.078 Sum_probs=157.2
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|+++|.+++ +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|
T Consensus 15 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~L 88 (261)
T 2xai_A 15 HQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-----VNGVTADWHTPLFNACVSGS-WDCVNLL 88 (261)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 4688999999997754 67899999999999999999999997766 88999999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.++ +++. +..|.||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++ .|+
T Consensus 89 l~~g~-~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~ 158 (261)
T 2xai_A 89 LQHGA-SVQP-ESDLASPIHEAARRGHVECVNSLIAYGGNIDH-------KISHLGTPLYLACENQQRACVKKLLE-SGA 158 (261)
T ss_dssp HHTTC-CSSC-SCTTCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CBTTTBCHHHHHHHTTCHHHHHHHHH-HTC
T ss_pred HHCCC-CCCC-CCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCc-------CCCCCCCHHHHHHHhCCHHHHHHHHH-cCC
Confidence 99997 5653 45689999999999999999999999998876 58899999999999999999999999 699
Q ss_pred hhcccCCCCCCHhHHhc--cCCcchhhhhhccchhhh
Q 037875 163 LIGEKDMDGMTALQLLS--CKPEAFKLKQERGFFKKL 197 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~--~~~~~~~~~~~~g~~~~~ 197 (204)
+++. +..|.||||+|+ .+.++.+.+++.|.....
T Consensus 159 ~~~~-~~~g~t~Lh~A~~~~~~~~v~~Ll~~gad~~~ 194 (261)
T 2xai_A 159 DVNQ-GKGQDSPLHAVARTASEELACLLMDFGADTQA 194 (261)
T ss_dssp CTTC-CBTTBCHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred CCCC-CCCCCChHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9996 889999999998 456788888888876543
No 20
>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A
Probab=100.00 E-value=2.1e-31 Score=192.81 Aligned_cols=165 Identities=17% Similarity=0.190 Sum_probs=149.6
Q ss_pred HHHHHHHhhhcc--ccc---cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHH
Q 037875 5 VIEVCRKISDHA--LHV---LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVA 79 (204)
Q Consensus 5 ~~~~~~~l~~~~--~~~---~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~ 79 (204)
..+++++|+++| .++ .+..|.||||+|+..|+.+++++|++.|.+ ..++..+..|.||||+|+..++ .+++
T Consensus 48 ~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~---~~~~~~~~~g~t~L~~A~~~~~-~~~~ 123 (228)
T 2dzn_A 48 AHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK---PDLNKITNQGVTCLHLAVGKKW-FEVS 123 (228)
T ss_dssp CHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHHHCCHHHHHHHHSSSSC---CCTTCCCTTCCCHHHHHHHTTC-HHHH
T ss_pred CHHHHHHHHhccccccccccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC---cccccCCcCCCCHHHHHHHcCC-HhHH
Confidence 468999999999 554 456899999999999999999999997722 2378889999999999999999 9999
Q ss_pred HHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcc-cCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHH
Q 037875 80 DKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKI-ADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAK 158 (204)
Q Consensus 80 ~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~-~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 158 (204)
++|++.+. +++.++..|.||||+|+..|+.+++++|++.| ++++. ++..|+||||+|+..|+.+++++|++
T Consensus 124 ~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-------~d~~g~t~L~~A~~~~~~~~v~~Ll~ 195 (228)
T 2dzn_A 124 QFLIENGA-SVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW-------QDKQGWTPLFHALAEGHGDAAVLLVE 195 (228)
T ss_dssp HHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCCCSCC-------CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHhcCcccccC-------cCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence 99999998 89999999999999999999999999999998 77776 58999999999999999999999994
Q ss_pred HhchhhcccCCCCCCHhHHhccC
Q 037875 159 EYKYLIGEKDMDGMTALQLLSCK 181 (204)
Q Consensus 159 ~~g~~~~~~~~~g~t~l~~a~~~ 181 (204)
..|++++.+|..|.||+++|...
T Consensus 196 ~~ga~~~~~~~~g~t~l~~A~~~ 218 (228)
T 2dzn_A 196 KYGAEYDLVDNKGAKAEDVALNE 218 (228)
T ss_dssp HHCCCSCCBCTTSCBGGGGCSST
T ss_pred hcCCCCCccCCCCCcHHHHHHHH
Confidence 47999999999999999999764
No 21
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=100.00 E-value=7e-32 Score=199.24 Aligned_cols=181 Identities=19% Similarity=0.128 Sum_probs=154.5
Q ss_pred HHHHHHhhhccccccc------cCCchHHHHHH---hcCChHHHHHHHhhCchhhh------hhhcccccCCCcHHHHHH
Q 037875 6 IEVCRKISDHALHVLT------VHDDTVLHMAT---YFKRDDLALKLLDEIPELYI------HKMTRQNKAGNTVLHATA 70 (204)
Q Consensus 6 ~~~~~~l~~~~~~~~~------~~~~~~L~~A~---~~~~~~~v~~Ll~~g~~~~~------~~~~~~~~~g~~~l~~a~ 70 (204)
..+++++++.+.+++. ..|.||||+|+ ..|+.+++++|++.|++... ...+..+..|.||||+|+
T Consensus 22 ~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~ 101 (260)
T 3jxi_A 22 EGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAI 101 (260)
T ss_dssp TTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHH
T ss_pred HHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHH
Confidence 3467777888877653 45999999999 67999999999998765322 224455668999999999
Q ss_pred hcCCCHHHHHHHHhhCCCcccccc--------------CCCCcHHHHHHHcCCHHHHHHHHh---cccCCCCCCCCcccc
Q 037875 71 TSSRALPVADKLLRKAPGLLGMRN--------------NNGETALFRSARYGKADIFNFLAG---KIADYDQPSKQPFLQ 133 (204)
Q Consensus 71 ~~~~~~~~~~~Ll~~~~~~~~~~~--------------~~~~t~l~~a~~~~~~~~~~~L~~---~~~~~~~~~~~~~~~ 133 (204)
..|+ .+++++|++.++ +++..+ ..|.||||+|+..|+.+++++|++ .|++++. +
T Consensus 102 ~~g~-~~~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~-------~ 172 (260)
T 3jxi_A 102 ERRC-KHYVELLVEKGA-DVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR-------Q 172 (260)
T ss_dssp HTTC-HHHHHHHHHTTC-CTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-------C
T ss_pred HcCC-HHHHHHHHhCCC-CcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcc-------c
Confidence 9999 999999999998 888887 589999999999999999999999 8888876 6
Q ss_pred CCCCccHHHHHHHhCC---------HHHHHHHHHHhchhh-------cccCCCCCCHhHHhccC--Ccchhhhhhccchh
Q 037875 134 RNDQSTVLHMAVISQH---------FELALEIAKEYKYLI-------GEKDMDGMTALQLLSCK--PEAFKLKQERGFFK 195 (204)
Q Consensus 134 ~~~g~t~l~~a~~~~~---------~~~~~~Ll~~~g~~~-------~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~ 195 (204)
+..|+||||+|+..++ .+++++|+. .|+++ +.+|..|.||||+|+.. .++.+.+++.|...
T Consensus 173 d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~ 251 (260)
T 3jxi_A 173 DSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI-KCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251 (260)
T ss_dssp CTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred CCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHH-hCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCc
Confidence 8999999999999887 799999999 69999 78999999999999854 57888888888765
Q ss_pred h
Q 037875 196 K 196 (204)
Q Consensus 196 ~ 196 (204)
.
T Consensus 252 ~ 252 (260)
T 3jxi_A 252 A 252 (260)
T ss_dssp H
T ss_pred c
Confidence 4
No 22
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.98 E-value=1.6e-31 Score=200.02 Aligned_cols=171 Identities=19% Similarity=0.145 Sum_probs=97.6
Q ss_pred HHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 6 IEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 6 ~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
.+++++|++.|.++ .+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|+
T Consensus 72 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll 145 (285)
T 3d9h_A 72 QLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQ-----VNGVTADWHTPLFNACVSGS-WDCVNLLL 145 (285)
T ss_dssp HHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----SSCCCTTCCCHHHHHHHHTC-HHHHHHHH
T ss_pred HHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCH-HHHHHHHH
Confidence 45666666665543 345566666666666666666666665444 44455555555555555554 45555555
Q ss_pred hhCCC-------------------------------ccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccc
Q 037875 84 RKAPG-------------------------------LLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFL 132 (204)
Q Consensus 84 ~~~~~-------------------------------~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~ 132 (204)
+.+.. +++..+..|.||||+|+..|+.+++++|++.|++++.
T Consensus 146 ~~g~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~------- 218 (285)
T 3d9h_A 146 QHGASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVNQ------- 218 (285)
T ss_dssp HTTCCSSCSCTTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTTCHHHHHHHHHTTCCTTC-------
T ss_pred HCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHCCCCCCC-------
Confidence 44431 4444455555555555555555555555555554442
Q ss_pred cCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccCCcchhhhhhc
Q 037875 133 QRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCKPEAFKLKQER 191 (204)
Q Consensus 133 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~ 191 (204)
+..|.||||+|+..++.+++++|++ .|++++.+|..|.|||++|+.+.++.+.+++.
T Consensus 219 -~~~g~t~L~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~~~~~~~~Ll~~ 275 (285)
T 3d9h_A 219 -GKGQDSPLHAVVRTASEELACLLMD-FGADTQAKNAEGKRPVELVPPESPLAQLFLER 275 (285)
T ss_dssp -CBTTBCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGSCTTSHHHHHHHHH
T ss_pred -CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCCCCHHHHhcCccHHHHHHHHh
Confidence 4556666666666666666666666 46666666666666666666656665555554
No 23
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.98 E-value=1.7e-31 Score=184.79 Aligned_cols=155 Identities=15% Similarity=0.091 Sum_probs=141.9
Q ss_pred CCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHH
Q 037875 23 HDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALF 102 (204)
Q Consensus 23 ~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~ 102 (204)
.|.||||.|+..|+.+++++|++.|.+ ++..+..|.||||+|+..++ .+++++|++.+. +++..+..|.||||
T Consensus 2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~ 74 (167)
T 3v31_A 2 ANSLSVHQLAAQGEMLYLATRIEQENV-----INHTDEEGFTPLMWAAAHGQ-IAVVEFLLQNGA-DPQLLGKGRESALS 74 (167)
T ss_dssp TTCCCHHHHHHTTCHHHHHHHHHHSSC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTCCCHHH
T ss_pred CCcchHHHHHHCCCHHHHHHHHHcCCC-----cCCCCCCCCCHHHHHHHCCC-HHHHHHHHHcCC-CCCCcCCCCCcHHH
Confidence 578999999999999999999997765 88999999999999999999 999999999987 88999999999999
Q ss_pred HHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc--
Q 037875 103 RSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC-- 180 (204)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~-- 180 (204)
+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++ .|++++.++..|.||+++|+.
T Consensus 75 ~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~ 146 (167)
T 3v31_A 75 LACSKGYTDIVKMLLDCGVDVNE-------YDWNGGTPLLYAVHGNHVKCVKMLLE-SGADPTIETDSGYNSMDLAVALG 146 (167)
T ss_dssp HHHHHTCHHHHHHHHHHTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHT
T ss_pred HHHHcCCHHHHHHHHHCCCCCCc-------CCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcC
Confidence 99999999999999999998886 58899999999999999999999999 699999999999999999984
Q ss_pred CCcchhhhhhcc
Q 037875 181 KPEAFKLKQERG 192 (204)
Q Consensus 181 ~~~~~~~~~~~g 192 (204)
+.++.+.+.+.+
T Consensus 147 ~~~~~~~L~~~~ 158 (167)
T 3v31_A 147 YRSVQQVIESHL 158 (167)
T ss_dssp CHHHHHHHHHHH
T ss_pred cHHHHHHHHHHH
Confidence 456666665544
No 24
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.98 E-value=1.3e-31 Score=195.44 Aligned_cols=178 Identities=17% Similarity=0.138 Sum_probs=140.6
Q ss_pred HHHHHHhhh----cccc--ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHH
Q 037875 6 IEVCRKISD----HALH--VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVA 79 (204)
Q Consensus 6 ~~~~~~l~~----~~~~--~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~ 79 (204)
++++++|++ .+.+ ..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++
T Consensus 22 ~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~l~~A~~~~~-~~~~ 95 (241)
T 1k1a_A 22 LPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGAS-----PMALDRHGQTAAHLACEHRS-PTCL 95 (241)
T ss_dssp HHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHH
T ss_pred HHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCC-----ccccCCCCCCHHHHHHHcCC-HHHH
Confidence 455666654 5554 4467788999999999999999999986665 67778888888888888888 8888
Q ss_pred HHHHhhCCC---ccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccC-CCCccHHHHHHHhCCHHHHHH
Q 037875 80 DKLLRKAPG---LLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQR-NDQSTVLHMAVISQHFELALE 155 (204)
Q Consensus 80 ~~Ll~~~~~---~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~ 155 (204)
++|++.+.. +++..+..|.||||+|+..|+.+++++|++.|++++. ++ ..|.||||+|+..|+.+++++
T Consensus 96 ~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~~g~t~L~~A~~~~~~~~v~~ 168 (241)
T 1k1a_A 96 RALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDA-------VDIKSGRSPLIHAVENNSLSMVQL 168 (241)
T ss_dssp HHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHHHHcCCCccccccccCcCCCcHHHHHHHcCCHHHHHHHHHcCCCccc-------ccccCCCcHHHHHHHcCCHHHHHH
Confidence 888888752 5666778888888888888888888888888888776 34 678888888888888888888
Q ss_pred HHHHhchhhcccCCCCCCHhHHhc--cCCcchhhhhhccchhhh
Q 037875 156 IAKEYKYLIGEKDMDGMTALQLLS--CKPEAFKLKQERGFFKKL 197 (204)
Q Consensus 156 Ll~~~g~~~~~~~~~g~t~l~~a~--~~~~~~~~~~~~g~~~~~ 197 (204)
|++ .|++++.++..|.||||+|+ .+.++.+.+++.|.....
T Consensus 169 Ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~ 211 (241)
T 1k1a_A 169 LLQ-HGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSL 211 (241)
T ss_dssp HHH-TTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTC
T ss_pred HHH-cCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC
Confidence 888 58888888888888888887 345677777777765443
No 25
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.98 E-value=5.7e-32 Score=208.82 Aligned_cols=183 Identities=14% Similarity=0.154 Sum_probs=137.0
Q ss_pred HHHHHhhhccccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcc-----------------cccCCCcHHHHH
Q 037875 7 EVCRKISDHALHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTR-----------------QNKAGNTVLHAT 69 (204)
Q Consensus 7 ~~~~~l~~~~~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~-----------------~~~~g~~~l~~a 69 (204)
+++++|+++|.++++..|.||||+|+..|+.+++++|++.+.+ .+..++. .+..|.||||+|
T Consensus 67 ~~v~~Ll~~g~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A 145 (364)
T 3ljn_A 67 DTAKYLASVGEVHSLWHGQKPIHLAVMANKTDLVVALVEGAKE-RGQMPESLLNECDEREVNEIGSHVKHCKGQTALHWC 145 (364)
T ss_dssp HHHHHHHHHCCCCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHH-HTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHHH
T ss_pred HHHHHHHHCCCCccccCCCCHHHHHHHcCCHHHHHHHHHhccc-cCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHHH
Confidence 4444555555444444455555555555555555555544111 1222333 777899999999
Q ss_pred HhcC--CCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHh
Q 037875 70 ATSS--RALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVIS 147 (204)
Q Consensus 70 ~~~~--~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 147 (204)
+..| + .+++++|++.++ +++..+..|.||||+|+..|+.+++++|+++|++.. ..+++.++..|+||||+|+..
T Consensus 146 ~~~g~~~-~~~v~~Ll~~ga-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~~~~~~~g~t~L~~A~~~ 221 (364)
T 3ljn_A 146 VGLGPEY-LEMIKILVQLGA-SPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKS--SLRLDYANKQGNSHLHWAILI 221 (364)
T ss_dssp HHSCGGG-HHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSS--SCCTTCCCTTCCCTTHHHHTT
T ss_pred HHcCCch-HHHHHHHHHcCC-CCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccc--cccccccCCCCCcHHHHHHHc
Confidence 9999 8 899999999987 889999999999999999999999999999988711 111233688999999999999
Q ss_pred CCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccchh
Q 037875 148 QHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFK 195 (204)
Q Consensus 148 ~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~ 195 (204)
|+.+++++|++ .|++++.+|..|.|||++|+.. .++.+.+++.|...
T Consensus 222 g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~ 270 (364)
T 3ljn_A 222 NWEDVAMRFVE-MGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVF 270 (364)
T ss_dssp TCHHHHHHHHT-TTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHH
T ss_pred CCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCch
Confidence 99999999999 6999999999999999999854 47778888877553
No 26
>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*
Probab=99.98 E-value=3.8e-31 Score=192.63 Aligned_cols=168 Identities=19% Similarity=0.209 Sum_probs=153.7
Q ss_pred HHHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|+++|.++ .+..|.||||+|+..|+.+++++|++.|. ..++..+..|.||||+|+..++ .+++++|
T Consensus 56 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~----~~~~~~~~~g~t~L~~A~~~~~-~~~~~~L 130 (237)
T 3b7b_A 56 HLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQ----MDVNCQDDGGWTPMIWATEYKH-VDLVKLL 130 (237)
T ss_dssp CHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTC----CCTTCCCTTSCCHHHHHHHTTC-HHHHHHH
T ss_pred CHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCC----CCcccCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 468999999999865 46789999999999999999999999762 2378889999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.+. +++..+..|.||||+|+..|+.+++++|++.|++++. ++..|.||||+|+..++.+++++|++ .|+
T Consensus 131 l~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga 201 (237)
T 3b7b_A 131 LSKGS-DINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA-------VNIHGDSPLHIAARENRYDCVVLFLS-RDS 201 (237)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTC-------CCTTCCCHHHHHHHTTCHHHHHHHHT-TTC
T ss_pred HHCCC-CCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHhCCHhHHHHHHH-cCC
Confidence 99998 8899999999999999999999999999999998876 58899999999999999999999999 699
Q ss_pred hhcccCCCCCCHhHHhccCCcchh
Q 037875 163 LIGEKDMDGMTALQLLSCKPEAFK 186 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~~~~~~~~ 186 (204)
+++.+|..|.||+++|+.++....
T Consensus 202 d~~~~d~~g~t~l~~A~~~~~~~~ 225 (237)
T 3b7b_A 202 DVTLKNKEGETPLQCASLNSQVWS 225 (237)
T ss_dssp CTTCCCTTSCCHHHHSCTTCHHHH
T ss_pred CCCccCCCCCCHHHHHHHHHHHHH
Confidence 999999999999999998876543
No 27
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.98 E-value=2.6e-31 Score=184.33 Aligned_cols=157 Identities=22% Similarity=0.240 Sum_probs=141.9
Q ss_pred ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcH
Q 037875 21 TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETA 100 (204)
Q Consensus 21 ~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~ 100 (204)
...+.++|+.|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|++.+. +++..+..|.||
T Consensus 11 ~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~ 83 (169)
T 2y1l_E 11 GSDLGKKLLEAARAGRDDEVRILMANGAD-----VNAEDASGWTPLHLAAFNGH-LEIVEVLLKNGA-DVNAVDHAGMTP 83 (169)
T ss_dssp --CHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTSCCH
T ss_pred CCcccchHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCccCCCCCCH
Confidence 34578999999999999999999997766 88899999999999999999 999999999997 889999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc
Q 037875 101 LFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC 180 (204)
Q Consensus 101 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~ 180 (204)
||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|+.
T Consensus 84 L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~ 155 (169)
T 2y1l_E 84 LRLAALFGHLEIVEVLLKNGADVNA-------NDMEGHTPLHLAAMFGHLEIVEVLLK-NGADVNAQDKFGKTAFDISID 155 (169)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHH
Confidence 9999999999999999999998876 58899999999999999999999999 699999999999999999985
Q ss_pred C--Ccchhhhhhcc
Q 037875 181 K--PEAFKLKQERG 192 (204)
Q Consensus 181 ~--~~~~~~~~~~g 192 (204)
+ .++.+.+++.|
T Consensus 156 ~~~~~~~~~L~~~G 169 (169)
T 2y1l_E 156 NGNEDLAEILQKLN 169 (169)
T ss_dssp TTCHHHHHHHHTC-
T ss_pred hCCHHHHHHHHHcC
Confidence 4 46677766654
No 28
>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D
Probab=99.98 E-value=2.5e-31 Score=198.04 Aligned_cols=168 Identities=19% Similarity=0.125 Sum_probs=138.6
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhh-------------------------------
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELY------------------------------- 51 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~------------------------------- 51 (204)
..+++++|+++|++++ +..|.||||+|+..|+.+++++|++.|++..
T Consensus 57 ~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 136 (282)
T 1oy3_D 57 EASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNP 136 (282)
T ss_dssp CHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSSCCCC----------------------------
T ss_pred CHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhcccccc
Confidence 4689999999998764 6789999999999999999999999775411
Q ss_pred -----------hhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccC-CCCcHHHHHHHcCCHHHHHHHHhc
Q 037875 52 -----------IHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNN-NGETALFRSARYGKADIFNFLAGK 119 (204)
Q Consensus 52 -----------~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~-~~~t~l~~a~~~~~~~~~~~L~~~ 119 (204)
+..++..+..|.||||+|+..++ .+++++|++.++ +++..+. .|.||||+|+..|+.+++++|+++
T Consensus 137 ~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~g~-~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ 214 (282)
T 1oy3_D 137 ENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKD-AEMVRLLRDAGA-DLNKPEPTCGRTPLHLAVEAQAASVLELLLKA 214 (282)
T ss_dssp -------CCCGGGGTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred chhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCC-HHHHHHHHHcCC-CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHc
Confidence 23467788899999999999999 999999999998 7888775 499999999999999999999999
Q ss_pred ccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccCC
Q 037875 120 IADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCKP 182 (204)
Q Consensus 120 ~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~~ 182 (204)
|++++. ++..|+||||+|+..|+.+++++|++ .|++++.++..|.||+++|....
T Consensus 215 gad~~~-------~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~a~~~~ 269 (282)
T 1oy3_D 215 GADPTA-------RMYGGRTPLGSALLRPNPILARLLRA-HGAPEPEDGGDKLSPCSSSGSDS 269 (282)
T ss_dssp TCCTTC-------CCTTSCCHHHHHHTSSCHHHHHHHHH-TTCCCCCCC--------------
T ss_pred CCCCcc-------cccCCCCHHHHHHHcCCcHHHHHHHH-cCCCcCcCCCcccccccccCCcc
Confidence 999887 68999999999999999999999999 69999999999999999997554
No 29
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.98 E-value=3.4e-31 Score=199.17 Aligned_cols=161 Identities=22% Similarity=0.219 Sum_probs=135.9
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
.++++++|+++|.+++ +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..|+ .+++++|
T Consensus 52 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~g~tpL~~A~~~g~-~~~v~~L 125 (299)
T 1s70_B 52 DTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGAN-----INQPDNEGWIPLHAAASCGY-LDIAEYL 125 (299)
T ss_dssp CHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHH
T ss_pred CHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHHcCC-HHHHHHH
Confidence 4678899999997764 67799999999999999999999997766 78889999999999999999 8999999
Q ss_pred HhhCCCcccccc------------------------------------------------------------CCCCcHHH
Q 037875 83 LRKAPGLLGMRN------------------------------------------------------------NNGETALF 102 (204)
Q Consensus 83 l~~~~~~~~~~~------------------------------------------------------------~~~~t~l~ 102 (204)
++.++ +++..+ ..|.||||
T Consensus 126 l~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~L~ 204 (299)
T 1s70_B 126 ISQGA-HVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALH 204 (299)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHH
T ss_pred HhCCC-CCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCcchhhhcCCCCCHHH
Confidence 99887 555443 34667888
Q ss_pred HHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc
Q 037875 103 RSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC 180 (204)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~ 180 (204)
+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|..
T Consensus 205 ~A~~~g~~~~v~~Ll~~g~d~~~-------~d~~g~tpL~~A~~~~~~~~v~~Ll~-~gad~~~~d~~g~t~l~~A~~ 274 (299)
T 1s70_B 205 VAAAKGYTEVLKLLIQARYDVNI-------KDYDGWTPLHAAAHWGKEEACRILVE-NLCDMEAVNKVGQTAFDVADE 274 (299)
T ss_dssp HHHHHTCHHHHHHHHTTTCCTTC-------CCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTTTSCCS
T ss_pred HHHHCCcHHHHHHHHHcCCCCCC-------cCCCCCcHHHHHHhcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHH
Confidence 88888888888888888887776 57888888888888888888888888 588888888888888888864
No 30
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.98 E-value=1.2e-31 Score=199.84 Aligned_cols=175 Identities=26% Similarity=0.251 Sum_probs=152.1
Q ss_pred HHHHHHHhhhcc----ccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHH-----hcCCC
Q 037875 5 VIEVCRKISDHA----LHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATA-----TSSRA 75 (204)
Q Consensus 5 ~~~~~~~l~~~~----~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~-----~~~~~ 75 (204)
.++.++.+++.+ .+..+..|.||||+|+..|+.+++++|++.|+. .++..+..|.||||+|+ ..++
T Consensus 88 ~~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~----~~~~~~~~g~tpL~~a~~~~~~~~~~- 162 (276)
T 4hbd_A 88 HLVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVC----KVDKQNRAGYSPIMLTALATLKTQDD- 162 (276)
T ss_dssp HHHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCC----CTTCCCTTSCCHHHHGGGCCCCSHHH-
T ss_pred HHHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCC----cCCCCCCCCCCHHHHHHHHHhhhhhh-
Confidence 345555555554 566788999999999999999999999998762 38899999999999999 5566
Q ss_pred HHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHH
Q 037875 76 LPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALE 155 (204)
Q Consensus 76 ~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 155 (204)
.+++++|+..+. +.+..+..|.||||+|+..|+.+++++|++.|++++. +|..|+||||+|+..|+.+++++
T Consensus 163 ~~~v~~Ll~~g~-~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~-------~d~~G~TpLh~A~~~g~~~iv~~ 234 (276)
T 4hbd_A 163 IETVLQLFRLGN-INAKASQAGQTALMLAVSHGRVDVVKALLACEADVNV-------QDDDGSTALMCACEHGHKEIAGL 234 (276)
T ss_dssp HHHHHHHHHHSC-TTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHHHcCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCC-------CCCCCCCHHHHHHHCCCHHHHHH
Confidence 889999999997 7778888999999999999999999999999999887 68999999999999999999999
Q ss_pred HHHHhchhhcccCCCCCCHhHHhcc--CCcchhhhhhcc
Q 037875 156 IAKEYKYLIGEKDMDGMTALQLLSC--KPEAFKLKQERG 192 (204)
Q Consensus 156 Ll~~~g~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g 192 (204)
|++..|++++.+|..|.|||++|+. +.++.+.+++..
T Consensus 235 Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~~ 273 (276)
T 4hbd_A 235 LLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSRM 273 (276)
T ss_dssp HHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred HHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence 9985699999999999999999984 456777666543
No 31
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=3e-32 Score=198.52 Aligned_cols=174 Identities=22% Similarity=0.206 Sum_probs=151.5
Q ss_pred HHHHhhhcc------ccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 8 VCRKISDHA------LHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 8 ~~~~l~~~~------~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
+++.|++.+ ++..+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++
T Consensus 23 ~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~ 96 (236)
T 1ikn_D 23 LTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCD-----PELRDFRGNTPLHLACEQGC-LASVGV 96 (236)
T ss_dssp SSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCC-----SCCCCTTCCCHHHHHHHHTC-HHHHHH
T ss_pred HHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCC-HHHHHH
Confidence 344555554 344577899999999999999999999997766 88899999999999999999 999999
Q ss_pred HHhhCCC-----ccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCC-CCccHHHHHHHhCCHHHHHH
Q 037875 82 LLRKAPG-----LLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRN-DQSTVLHMAVISQHFELALE 155 (204)
Q Consensus 82 Ll~~~~~-----~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~-~g~t~l~~a~~~~~~~~~~~ 155 (204)
|+..+.. .++..+..|.||||+|+..|+.+++++|+++|++++. ++. .|.||||+|+..|+.+++++
T Consensus 97 Ll~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~~g~tpL~~A~~~~~~~~v~~ 169 (236)
T 1ikn_D 97 LTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNA-------QEPCNGRTALHLAVDLQNPDLVSL 169 (236)
T ss_dssp HHHSTTTTSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTC-------CCTTTCCCHHHHHHHTTCHHHHHH
T ss_pred HHhcccchhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------CCCCCCCCHHHHHHHcCCHHHHHH
Confidence 9998752 2566788899999999999999999999999999887 465 89999999999999999999
Q ss_pred HHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccchh
Q 037875 156 IAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFK 195 (204)
Q Consensus 156 Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~ 195 (204)
|++ .|++++.++..|.|||++|+.. .++.+.+++.|...
T Consensus 170 Ll~-~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~ 210 (236)
T 1ikn_D 170 LLK-CGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210 (236)
T ss_dssp HHT-TTCCSCCCCTTCCCGGGGCTTSSCHHHHHHHHTTSCGG
T ss_pred HHH-cCCCCCcccCCCCCHHHHHHccCchHHHHHHHHcchhh
Confidence 999 6999999999999999999854 57888888888754
No 32
>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}
Probab=99.97 E-value=6.4e-31 Score=196.83 Aligned_cols=166 Identities=20% Similarity=0.129 Sum_probs=133.2
Q ss_pred hhhccccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccc
Q 037875 12 ISDHALHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLG 91 (204)
Q Consensus 12 l~~~~~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~ 91 (204)
++++..+..+..|.||||+|+..|+.+++++|++.|.+ ++.++..|.||||+|+..++ .+++++|++.++ +++
T Consensus 47 l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~ga-~~~ 119 (285)
T 3d9h_A 47 LLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWA-----VNIITADHVSPLHEACLGGH-LSCVKILLKHGA-QVN 119 (285)
T ss_dssp CCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCC-----SCEECTTCCCHHHHHHHTTC-HHHHHHHHHTTC-CSS
T ss_pred hhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHHCCc-HHHHHHHHHCCC-CCC
Confidence 45666777889999999999999999999999997766 88899999999999999999 999999999997 899
Q ss_pred cccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCC
Q 037875 92 MRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDG 171 (204)
Q Consensus 92 ~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g 171 (204)
..+..|.||||+|+..|+.+++++|++.|++++. +..|.||||+|+..|+.+++++|++ .|++++.++..|
T Consensus 120 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~--------~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~~~~~~d~~g 190 (285)
T 3d9h_A 120 GVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP--------ESDLASPIHEAARRGHVECVNSLIA-YGGNIDHKISHL 190 (285)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSC--------SCTTSCHHHHHHHHTCHHHHHHHHH-TTCCTTCCBTTT
T ss_pred CCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCC--------CCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCcCCCC
Confidence 9999999999999999999999999999988764 2336666666666666666666666 466666666666
Q ss_pred CCHhHHhccC--Ccchhhhhhccc
Q 037875 172 MTALQLLSCK--PEAFKLKQERGF 193 (204)
Q Consensus 172 ~t~l~~a~~~--~~~~~~~~~~g~ 193 (204)
.|||++|+.. .++++.+++.|.
T Consensus 191 ~t~L~~A~~~~~~~~v~~Ll~~ga 214 (285)
T 3d9h_A 191 GTPLYLACENQQRACVKKLLESGA 214 (285)
T ss_dssp BCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred CCHHHHHHHcCcHHHHHHHHHCCC
Confidence 6666666533 345555555543
No 33
>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A
Probab=99.97 E-value=1.2e-30 Score=190.30 Aligned_cols=176 Identities=18% Similarity=0.190 Sum_probs=153.4
Q ss_pred HHHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|+++|.++ .+..|.||||+|+..|+.+++++|++.++. ....++..+..|.||||+|+..++ .+++++|
T Consensus 58 ~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~-~~~~~~L 135 (241)
T 1k1a_A 58 LPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP-GTLDLEARNYDGLTALHVAVNTEC-QETVQLL 135 (241)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCT-TSCCTTCCCTTSCCHHHHHHHHTC-HHHHHHH
T ss_pred CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-ccccccccCcCCCcHHHHHHHcCC-HHHHHHH
Confidence 468999999999875 467899999999999999999999998763 223478889999999999999999 9999999
Q ss_pred HhhCCCcccccc-CCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc
Q 037875 83 LRKAPGLLGMRN-NNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK 161 (204)
Q Consensus 83 l~~~~~~~~~~~-~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g 161 (204)
++.+. +++..+ ..|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|
T Consensus 136 l~~g~-~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g 206 (241)
T 1k1a_A 136 LERGA-DIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA-------QMYSGSSALHSASGRGLLPLVRTLVR-SG 206 (241)
T ss_dssp HHTTC-CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------BCTTSCBHHHHHHHHTCHHHHHHHHH-TT
T ss_pred HHcCC-CcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHh-cC
Confidence 99998 787777 7899999999999999999999999998876 68899999999999999999999999 69
Q ss_pred hhhcccCCCCCCHhHHhccCC--cchhhhhhc
Q 037875 162 YLIGEKDMDGMTALQLLSCKP--EAFKLKQER 191 (204)
Q Consensus 162 ~~~~~~~~~g~t~l~~a~~~~--~~~~~~~~~ 191 (204)
++++.+|..|.||+++|+..+ ++++.+.+.
T Consensus 207 a~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~ 238 (241)
T 1k1a_A 207 ADSSLKNCHNDTPLMVARSRRVIDILRGKATR 238 (241)
T ss_dssp CCTTCCCTTSCCTTTTCSSHHHHHHHTC----
T ss_pred CCCCCcCCCCCCHHHHHHhcCcHHHHhhhccC
Confidence 999999999999999998543 555555443
No 34
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.2e-30 Score=199.85 Aligned_cols=184 Identities=19% Similarity=0.173 Sum_probs=144.1
Q ss_pred HHHHHhhhc-cccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 7 EVCRKISDH-ALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 7 ~~~~~l~~~-~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
+.++.++.. +.++ .+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..|+ .+++++|+
T Consensus 38 ~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~g~-~~iv~~Ll 111 (351)
T 3utm_A 38 EKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD-----VHAKDKGGLVPLHNACSYGH-YEVTELLL 111 (351)
T ss_dssp HHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTC-HHHHHHHH
T ss_pred HHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCcHHHHHHHCCC-HHHHHHHH
Confidence 444444443 4443 466788888888888888888888886655 77778888888888888888 78888888
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCC-------------------------------------
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQP------------------------------------- 126 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~------------------------------------- 126 (204)
+.++ +++..+..|.||||+|+..|+.+++++|+++|++++..
T Consensus 112 ~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (351)
T 3utm_A 112 KHGA-CVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREAD 190 (351)
T ss_dssp HTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred HCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhcc
Confidence 8876 77777888888888888888888888888877765421
Q ss_pred ----------------------------------------------CCCccccCCCCccHHHHHHHhCCHHHHHHHHHHh
Q 037875 127 ----------------------------------------------SKQPFLQRNDQSTVLHMAVISQHFELALEIAKEY 160 (204)
Q Consensus 127 ----------------------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~ 160 (204)
+.+++.++..|+||||+|+..|+.+++++|++ .
T Consensus 191 ~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ 269 (351)
T 3utm_A 191 LAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHK-H 269 (351)
T ss_dssp HHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHH-T
T ss_pred HHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHH-C
Confidence 12245578889999999999999999999998 6
Q ss_pred chhhcccCCCCCCHhHHhc--cCCcchhhhhhccchhhhh
Q 037875 161 KYLIGEKDMDGMTALQLLS--CKPEAFKLKQERGFFKKLL 198 (204)
Q Consensus 161 g~~~~~~~~~g~t~l~~a~--~~~~~~~~~~~~g~~~~~~ 198 (204)
|++++.+|..|.||||+|+ .+.++.+.+++.|......
T Consensus 270 ga~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~ 309 (351)
T 3utm_A 270 GAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSII 309 (351)
T ss_dssp TCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC
T ss_pred CCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCc
Confidence 9999999999999999998 4557888888888765544
No 35
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.97 E-value=6.3e-31 Score=201.05 Aligned_cols=189 Identities=21% Similarity=0.230 Sum_probs=158.9
Q ss_pred HHHHHHHhhhcccccc--c-cCCchHHHHHHhcCChHHHHHHHhhCchhh----------------------------hh
Q 037875 5 VIEVCRKISDHALHVL--T-VHDDTVLHMATYFKRDDLALKLLDEIPELY----------------------------IH 53 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~-~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~----------------------------~~ 53 (204)
-++++++|+++|++++ + ..|.||||+|+..|+.++|++|++.|++++ +.
T Consensus 37 ~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 116 (337)
T 4g8k_A 37 DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGA 116 (337)
T ss_dssp CHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHTTTC
T ss_pred CHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCCchhHHHHhcccchhhHHhhhccc
Confidence 4689999999999875 3 348999999999999999999999987653 23
Q ss_pred hhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccc----------cCCCCcHHHHHHHcCCHHHHHHHHh-cccC
Q 037875 54 KMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMR----------NNNGETALFRSARYGKADIFNFLAG-KIAD 122 (204)
Q Consensus 54 ~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~~~~L~~-~~~~ 122 (204)
.++..+..|.||+|+|+..++ .+++++|+..++ +++.. +..|.||||+|+..|+.+++++|++ .|++
T Consensus 117 ~~~~~d~~g~t~l~~A~~~~~-~~~~~~ll~~ga-~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad 194 (337)
T 4g8k_A 117 DVNECDFYGFTAFMEAAVYGK-VKALKFLYKRGA-NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD 194 (337)
T ss_dssp CTTCBCTTCCBHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC
T ss_pred hhhhhccCCCCHHHHHHHcCc-HHHHHHHHHcCC-CcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC
Confidence 567778899999999999999 899999999887 55432 4568899999999999999999996 4777
Q ss_pred CCCC------------------------------CCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCC
Q 037875 123 YDQP------------------------------SKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGM 172 (204)
Q Consensus 123 ~~~~------------------------------~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~ 172 (204)
++.. +.+++.++..|+||||+|+..|+.++++.|+...|++++.+|.+|.
T Consensus 195 ~n~~d~~g~t~l~~~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~ 274 (337)
T 4g8k_A 195 VNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGK 274 (337)
T ss_dssp TTCCCTTSCCHHHHHHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSC
T ss_pred cCccCCCCCcHHHHHHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCC
Confidence 6532 2335678889999999999999999999999867999999999999
Q ss_pred CHhHHhccC--Ccchhhhhhccchh
Q 037875 173 TALQLLSCK--PEAFKLKQERGFFK 195 (204)
Q Consensus 173 t~l~~a~~~--~~~~~~~~~~g~~~ 195 (204)
||||+|+.. .++.+.+++.|+..
T Consensus 275 TpL~~A~~~g~~~iv~~Ll~~GAd~ 299 (337)
T 4g8k_A 275 TALLLAVELKLKKIAELLCKRGAST 299 (337)
T ss_dssp BHHHHHHHTTCHHHHHHHHTTSCSS
T ss_pred CHHHHHHHcCCHHHHHHHHHCCCCC
Confidence 999999854 57788888888654
No 36
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.97 E-value=2.5e-31 Score=202.64 Aligned_cols=172 Identities=15% Similarity=0.111 Sum_probs=144.3
Q ss_pred HHHHHHHHhhhccccc---cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCC--HHH
Q 037875 4 KVIEVCRKISDHALHV---LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRA--LPV 78 (204)
Q Consensus 4 ~~~~~~~~l~~~~~~~---~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~--~~~ 78 (204)
.+.++++.|++.|+++ .+..|.||||+|+..|+.++|++|++.|++ ++.++..|.||||+|+..++. .++
T Consensus 108 ~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad-----~n~~d~~g~TpLh~A~~~g~~~~~~~ 182 (327)
T 1sw6_A 108 LLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSN-----RLYGDNMGESCLVKAVKSVNNYDSGT 182 (327)
T ss_dssp HHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTBCCTTCCCHHHHHHHSSHHHHTTC
T ss_pred hHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHhcccccHHH
Confidence 4567888999999876 467899999999999999999999997776 889999999999999998761 256
Q ss_pred HHHHHhhCCCccccccCCCCcHHHHHHH----cCCHHHHHHHHhcc--------------------cCCCCCCC------
Q 037875 79 ADKLLRKAPGLLGMRNNNGETALFRSAR----YGKADIFNFLAGKI--------------------ADYDQPSK------ 128 (204)
Q Consensus 79 ~~~Ll~~~~~~~~~~~~~~~t~l~~a~~----~~~~~~~~~L~~~~--------------------~~~~~~~~------ 128 (204)
++.|+..+..+++.++..|.||||+|+. .|+.+++++|++.+ ++++....
T Consensus 183 ~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L 262 (327)
T 1sw6_A 183 FEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSI 262 (327)
T ss_dssp HHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC----------------CHH
T ss_pred HHHHHHhhhccccCCCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChh
Confidence 7777777644788999999999999999 89999999999874 33332111
Q ss_pred ------------CccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC
Q 037875 129 ------------QPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK 181 (204)
Q Consensus 129 ------------~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~ 181 (204)
+++.++..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+.+
T Consensus 263 ~~a~~~~~Ll~~~~n~~d~~G~TpLh~A~~~g~~~~v~~Ll~-~Gad~~~~d~~G~TpL~~A~~~ 326 (327)
T 1sw6_A 263 LENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD-YGADPFIANKSGLRPVDFGAGL 326 (327)
T ss_dssp HHHCSHHHHHHHTTTCCCTTSCCHHHHHHHHCCHHHHHHHHH-TTCCTTCCCTTSCCGGGGTCC-
T ss_pred HHHHHHHHHHHhCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHhc
Confidence 255678999999999999999999999998 6999999999999999999865
No 37
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.97 E-value=2.6e-31 Score=183.46 Aligned_cols=160 Identities=19% Similarity=0.151 Sum_probs=142.5
Q ss_pred cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCc
Q 037875 20 LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGET 99 (204)
Q Consensus 20 ~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t 99 (204)
.+.++.++|+.|+..|+.+++++|++.+.. .++..+..|.||||+|+..++ .+++++|++.+. +++..+..|.|
T Consensus 4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t 77 (165)
T 3twr_A 4 GNSEADRQLLEAAKAGDVETVKKLCTVQSV----NCRDIEGRQSTPLHFAAGYNR-VSVVEYLLQHGA-DVHAKDKGGLV 77 (165)
T ss_dssp --CHHHHHHHHHHHHTCHHHHHHHCCTTTT----TCCCTTTTCCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTSCC
T ss_pred CcchhhHHHHHHHHhCCHHHHHHHHHcCCC----CccccccCCCCHHHHHHHcCh-HHHHHHHHhcCC-CCCccCCCCCC
Confidence 466789999999999999999999986432 367778889999999999999 999999999998 89999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc
Q 037875 100 ALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS 179 (204)
Q Consensus 100 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~ 179 (204)
|||+|+..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++ .|++++.+|..|.||+++|.
T Consensus 78 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~a~ 149 (165)
T 3twr_A 78 PLHNACSYGHYEVAELLVKHGAVVNV-------ADLWKFTPLHEAAAKGKYEICKLLLQ-HGADPTKKNRDGNTPLDLVK 149 (165)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCTGGGSC
T ss_pred HHHHHHHcCcHHHHHHHHhCCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCcccCCCCCChhHhHh
Confidence 99999999999999999999999887 58899999999999999999999999 69999999999999999987
Q ss_pred c-CCcchhhhhhccc
Q 037875 180 C-KPEAFKLKQERGF 193 (204)
Q Consensus 180 ~-~~~~~~~~~~~g~ 193 (204)
. +.++.+++.+.|+
T Consensus 150 ~~~~~i~~~L~~~gA 164 (165)
T 3twr_A 150 DGDTDIQDLLRGDAA 164 (165)
T ss_dssp TTCHHHHHHHHTC--
T ss_pred cCChHHHHHHhhccc
Confidence 4 3477777777765
No 38
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.97 E-value=3.4e-31 Score=182.27 Aligned_cols=156 Identities=22% Similarity=0.227 Sum_probs=140.5
Q ss_pred cCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHH
Q 037875 22 VHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETAL 101 (204)
Q Consensus 22 ~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l 101 (204)
....+|||.|+..|+.+++++|++.|.+ ++..+..|.||||+|+. ++ .+++++|++.+. +++.++..|.|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~-~~-~~~v~~Ll~~g~-~~~~~~~~g~t~L 74 (162)
T 1ihb_A 3 EPWGNELASAAARGDLEQLTSLLQNNVN-----VNAQNGFGRTALQVMKL-GN-PEIARRLLLRGA-NPDLKDRTGFAVI 74 (162)
T ss_dssp --CHHHHHHHHHHTCHHHHHHHTTSCCC-----TTCCCTTSCCHHHHCCS-SC-HHHHHHHHHTTC-CTTCCCTTSCCHH
T ss_pred chHhhHHHHHHHcCCHHHHHHHHhCCCC-----ccccCccCccHHHHHHc-Cc-HHHHHHHHHcCC-CCCCCCCCCCCHH
Confidence 3467999999999999999999997765 78899999999999998 88 899999999997 8999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchh-hcccCCCCCCHhHHhcc
Q 037875 102 FRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYL-IGEKDMDGMTALQLLSC 180 (204)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~-~~~~~~~g~t~l~~a~~ 180 (204)
|+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++ ++.++..|.|||++|+.
T Consensus 75 ~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~t~l~~A~~ 146 (162)
T 1ihb_A 75 HDAARAGFLDTLQTLLEFQADVNI-------EDNEGNLPLHLAAKEGHLRVVEFLVK-HTASNVGHRNHKGDTACDLARL 146 (162)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-HSCCCTTCCCTTSCCHHHHHHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHH-ccCCCCCCcCCCCCcHHHHHHH
Confidence 999999999999999999998876 58899999999999999999999999 5887 69999999999999985
Q ss_pred --CCcchhhhhhccc
Q 037875 181 --KPEAFKLKQERGF 193 (204)
Q Consensus 181 --~~~~~~~~~~~g~ 193 (204)
+.++.+.+++.|+
T Consensus 147 ~~~~~~~~~Ll~~GA 161 (162)
T 1ihb_A 147 YGRNEVVSLMQANGA 161 (162)
T ss_dssp TTCHHHHHHHHHTC-
T ss_pred cCCHHHHHHHHHhCC
Confidence 4578888888775
No 39
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=8.2e-31 Score=182.13 Aligned_cols=156 Identities=17% Similarity=0.107 Sum_probs=120.0
Q ss_pred CchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHH
Q 037875 24 DDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFR 103 (204)
Q Consensus 24 ~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~ 103 (204)
+.+|||.|+..|+.+++++|++.+... ++..+..|.||||+|+..++ .+++++|++.++ +++..+..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~~ 75 (172)
T 3v30_A 2 DSLSIHQLAAQGELDQLKEHLRKGDNL----VNKPDERGFTPLIWASAFGE-IETVRFLLEWGA-DPHILAKERESALSL 75 (172)
T ss_dssp --CCHHHHHHTTCHHHHHHHHTTCSGG----GGCCCTTSCCHHHHHHHTTC-HHHHHHHHHHTC-CTTCCCTTCCCHHHH
T ss_pred chhhHHHHHHcCCHHHHHHHHHcCccc----ccCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CchhhcccCCCHHHH
Confidence 357788888888888888888866542 66777788888888888887 788888888876 777778888888888
Q ss_pred HHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc--C
Q 037875 104 SARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC--K 181 (204)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~--~ 181 (204)
|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++++.++..|.|||++|+. +
T Consensus 76 A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~ 147 (172)
T 3v30_A 76 ASTGGYTDIVGLLLERDVDINI-------YDWNGGTPLLYAVRGNHVKCVEALLA-RGADLTTEADSGYTPMDLAVALGY 147 (172)
T ss_dssp HHHTTCHHHHHHHHTTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred HHHCCCHHHHHHHHHcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHhCc
Confidence 8888888888888888777665 46778888888888888888888887 588888888888888888873 4
Q ss_pred Ccchhhhhhccc
Q 037875 182 PEAFKLKQERGF 193 (204)
Q Consensus 182 ~~~~~~~~~~g~ 193 (204)
.++.+.+++.|.
T Consensus 148 ~~~~~~L~~~~~ 159 (172)
T 3v30_A 148 RKVQQVIENHIL 159 (172)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 466666666654
No 40
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.97 E-value=8.4e-31 Score=194.85 Aligned_cols=178 Identities=19% Similarity=0.150 Sum_probs=149.7
Q ss_pred HHHHhhhcccccc------ccCCchHHHHHHhc---CChHHHHHHHhhCchhhhh--hhc----ccccCCCcHHHHHHhc
Q 037875 8 VCRKISDHALHVL------TVHDDTVLHMATYF---KRDDLALKLLDEIPELYIH--KMT----RQNKAGNTVLHATATS 72 (204)
Q Consensus 8 ~~~~l~~~~~~~~------~~~~~~~L~~A~~~---~~~~~v~~Ll~~g~~~~~~--~~~----~~~~~g~~~l~~a~~~ 72 (204)
+++++.+.+.+++ +..|.||||+|+.. |+.+++++|++.|++.... .++ ..+..|.||||+|+..
T Consensus 32 Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~ 111 (273)
T 2pnn_A 32 LLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIER 111 (273)
T ss_dssp HHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHT
T ss_pred HHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHc
Confidence 4444445665543 67899999999987 9999999999987653210 122 2567899999999999
Q ss_pred CCCHHHHHHHHhhCCCccccccC--------------CCCcHHHHHHHcCCHHHHHHHHh---cccCCCCCCCCccccCC
Q 037875 73 SRALPVADKLLRKAPGLLGMRNN--------------NGETALFRSARYGKADIFNFLAG---KIADYDQPSKQPFLQRN 135 (204)
Q Consensus 73 ~~~~~~~~~Ll~~~~~~~~~~~~--------------~~~t~l~~a~~~~~~~~~~~L~~---~~~~~~~~~~~~~~~~~ 135 (204)
++ .+++++|++.++ +++..+. .|.||||+|+..|+.+++++|++ .|++++. ++.
T Consensus 112 g~-~~~v~~Ll~~ga-~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~-------~d~ 182 (273)
T 2pnn_A 112 RN-MTLVTLLVENGA-DVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISA-------RDS 182 (273)
T ss_dssp TC-HHHHHHHHHTTC-CTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTC-------CCT
T ss_pred CC-HHHHHHHHHCCC-CcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCcee-------eCC
Confidence 99 999999999998 7888876 79999999999999999999999 8888876 689
Q ss_pred CCccHHHHHHHhCC---------HHHHHHHHHHhchhhc-------ccCCCCCCHhHHhccC--Ccchhhhhhccchh
Q 037875 136 DQSTVLHMAVISQH---------FELALEIAKEYKYLIG-------EKDMDGMTALQLLSCK--PEAFKLKQERGFFK 195 (204)
Q Consensus 136 ~g~t~l~~a~~~~~---------~~~~~~Ll~~~g~~~~-------~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~ 195 (204)
.|+||||+|+..|+ .+++++|++ .|++++ .+|..|.||||+|+.. .++.+.+++.|+.+
T Consensus 183 ~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~-~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~d 259 (273)
T 2pnn_A 183 VGNTVLHALVEVADNTVDNTKFVTSMYNEILI-LGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIHE 259 (273)
T ss_dssp TSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHH-HHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC-
T ss_pred CCCcHHHHHHHccCcchhHHHHHHHHHHHHHH-hhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCCC
Confidence 99999999999998 799999999 699997 4899999999999854 57888999999843
No 41
>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}
Probab=99.97 E-value=3.4e-31 Score=196.72 Aligned_cols=178 Identities=17% Similarity=0.122 Sum_probs=135.6
Q ss_pred HHHHHHHhhhcccc----------ccccCCchHHHHHHhcCCh-HHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcC
Q 037875 5 VIEVCRKISDHALH----------VLTVHDDTVLHMATYFKRD-DLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSS 73 (204)
Q Consensus 5 ~~~~~~~l~~~~~~----------~~~~~~~~~L~~A~~~~~~-~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~ 73 (204)
-++++++|++.+.+ ..+..+.+||+.|+..+.. .+++.|++.|++ +|.++..|.||||+|+..|
T Consensus 23 ~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gad-----vn~~d~~G~TpLh~A~~~g 97 (269)
T 4b93_B 23 DLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLG-----VNVTSQDGSSPLHVAALHG 97 (269)
T ss_dssp CHHHHHHHHTCC----------------------------------------CCCC-----TTCCCTTSCCHHHHHHHTT
T ss_pred CHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHHcC
Confidence 36889999998754 2345689999999988765 578999997766 8899999999999999999
Q ss_pred CCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHH
Q 037875 74 RALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELA 153 (204)
Q Consensus 74 ~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 153 (204)
+ .+++++|+..++ +++..+..|.||++.|+..++.+++++|++.|++++. ++..|+||||+|+..|+.+++
T Consensus 98 ~-~~~v~~Ll~~~a-~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~-------~d~~g~TpL~~A~~~g~~~~v 168 (269)
T 4b93_B 98 R-ADLIPLLLKHGA-NAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNK-------KDLSGNTPLIYACSGGHHELV 168 (269)
T ss_dssp C-TTHHHHHHHTTC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCC-------CCTTCCCHHHHHHHTTCGGGH
T ss_pred c-HHHHHHHHhcCC-CcCccCCCCCCccccccccChHHHHHHHHHCCCCCCC-------CCCCCCCHHHHHHHCCCHHHH
Confidence 9 899999999998 8899999999999999999999999999999998876 689999999999999999999
Q ss_pred HHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccchhhh
Q 037875 154 LEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKKL 197 (204)
Q Consensus 154 ~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~~ 197 (204)
++|++ .|++++.++..|.||||+|+.. .++.+.+++.|+....
T Consensus 169 ~~Ll~-~gadvn~~~~~g~t~Lh~A~~~g~~~~v~~Ll~~Gad~~~ 213 (269)
T 4b93_B 169 ALLLQ-HGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQV 213 (269)
T ss_dssp HHHHH-TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred HHHHH-CCCCCCccccCCCcHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence 99999 6999999999999999999854 4788888888876543
No 42
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=4.2e-30 Score=191.39 Aligned_cols=183 Identities=21% Similarity=0.174 Sum_probs=149.0
Q ss_pred HHHHHHHhhhcccccc---ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 5 VIEVCRKISDHALHVL---TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~---~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
.++++++|+++|.+++ +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++
T Consensus 17 ~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~ 90 (285)
T 1wdy_A 17 DVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD-----PVLRKKNGATPFLLAAIAGS-VKLLKL 90 (285)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHHTC-HHHHHH
T ss_pred CHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHHcCC-HHHHHH
Confidence 4689999999998765 56789999999999999999999997766 78889999999999999999 999999
Q ss_pred HHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCC---ccccCCCCccHHHHHHHhCCHHHHHHHHH
Q 037875 82 LLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQ---PFLQRNDQSTVLHMAVISQHFELALEIAK 158 (204)
Q Consensus 82 Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~---~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 158 (204)
|++.+. +++..+..|.||||+|+..|+.+++++|++.|++++..... ....+..|.||||+|+..|+.+++++|++
T Consensus 91 Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~ 169 (285)
T 1wdy_A 91 FLSKGA-DVNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 169 (285)
T ss_dssp HHHTTC-CTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHH
T ss_pred HHHcCC-CCCccCcccCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHH
Confidence 999998 88899999999999999999999999999999987753110 01115667788888888888888888877
Q ss_pred HhchhhcccCCCCCCHhHHhccCC------cchhhhhhccch
Q 037875 159 EYKYLIGEKDMDGMTALQLLSCKP------EAFKLKQERGFF 194 (204)
Q Consensus 159 ~~g~~~~~~~~~g~t~l~~a~~~~------~~~~~~~~~g~~ 194 (204)
..|++++.++..|.|||++|+..+ ++.+.+++.|..
T Consensus 170 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~Ll~~g~~ 211 (285)
T 1wdy_A 170 EMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGAD 211 (285)
T ss_dssp TSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHHHHHTTCC
T ss_pred hcCCCCCccCCCCCCHHHHHHHccccchHHHHHHHHHHcCCC
Confidence 557888887778888888776443 345555555543
No 43
>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A
Probab=99.97 E-value=4.8e-30 Score=178.28 Aligned_cols=155 Identities=15% Similarity=0.073 Sum_probs=136.9
Q ss_pred HHHHHHHhhhcccc---ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 5 VIEVCRKISDHALH---VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 5 ~~~~~~~l~~~~~~---~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
-+++++.+++.+.. ..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++
T Consensus 14 ~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~ 87 (172)
T 3v30_A 14 ELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD-----PHILAKERESALSLASTGGY-TDIVGL 87 (172)
T ss_dssp CHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCCCTTCCCHHHHHHHTTC-HHHHHH
T ss_pred CHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----chhhcccCCCHHHHHHHCCC-HHHHHH
Confidence 36788999998854 4577899999999999999999999997766 88899999999999999999 999999
Q ss_pred HHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc
Q 037875 82 LLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK 161 (204)
Q Consensus 82 Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g 161 (204)
|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .+
T Consensus 88 Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~t~l~~A~~~~~~~~~~~L~~-~~ 158 (172)
T 3v30_A 88 LLERDV-DINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTT-------EADSGYTPMDLAVALGYRKVQQVIEN-HI 158 (172)
T ss_dssp HHTTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHHHHH-HH
T ss_pred HHHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-------cCCCCCCHHHHHHHhCcHHHHHHHHH-HH
Confidence 999998 8999999999999999999999999999999998876 58899999999999999999999999 69
Q ss_pred hhhcccCCCCCCH
Q 037875 162 YLIGEKDMDGMTA 174 (204)
Q Consensus 162 ~~~~~~~~~g~t~ 174 (204)
+++..++..|.||
T Consensus 159 ~~~~~~~~~~~~p 171 (172)
T 3v30_A 159 LKLFQSNLVPADP 171 (172)
T ss_dssp HHHSCC-------
T ss_pred HHHhcccCCCCCC
Confidence 9999999999887
No 44
>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=3.8e-30 Score=191.60 Aligned_cols=183 Identities=20% Similarity=0.217 Sum_probs=109.6
Q ss_pred HHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 6 IEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 6 ~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
.+++++|+++|.++ .+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|+
T Consensus 52 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll 125 (285)
T 1wdy_A 52 EDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD-----VNECDFYGFTAFMEAAVYGK-VKALKFLY 125 (285)
T ss_dssp HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----TTCBCTTCCBHHHHHHHTTC-HHHHHHHH
T ss_pred HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCcccCCHHHHHHHhCC-HHHHHHHH
Confidence 45556666665543 244556666666666666666666664443 44445555555555555554 45555555
Q ss_pred hhCCCccccc----------cCCCCcHHHHHHHcCCHHHHHHHHhc-ccCCCCC--------------------------
Q 037875 84 RKAPGLLGMR----------NNNGETALFRSARYGKADIFNFLAGK-IADYDQP-------------------------- 126 (204)
Q Consensus 84 ~~~~~~~~~~----------~~~~~t~l~~a~~~~~~~~~~~L~~~-~~~~~~~-------------------------- 126 (204)
+.+. +++.. +..|.||||+|+..|+.+++++|++. |++++..
T Consensus 126 ~~g~-~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~i~~~ 204 (285)
T 1wdy_A 126 KRGA-NVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHL 204 (285)
T ss_dssp HTTC-CTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHHHHHCSCTTTHHHHHHH
T ss_pred HhCC-CcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHHHHHccccchHHHHHHH
Confidence 5444 33333 33444455555444444444444443 4333321
Q ss_pred ----CCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc--CCcchhhhhhccchh
Q 037875 127 ----SKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC--KPEAFKLKQERGFFK 195 (204)
Q Consensus 127 ----~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g~~~ 195 (204)
+.+++.++..|.||||+|+..|+.+++++|++..|++++.+|..|.|||++|+. +.++.+.+++.|...
T Consensus 205 Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~~~~~~i~~~Ll~~Ga~~ 279 (285)
T 1wdy_A 205 LLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAST 279 (285)
T ss_dssp HHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSSCS
T ss_pred HHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHHcCcHHHHHHHHHcCCCC
Confidence 111233677888888888888888888888886688888888888888888874 457777888877654
No 45
>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus}
Probab=99.97 E-value=4.1e-30 Score=186.64 Aligned_cols=165 Identities=21% Similarity=0.114 Sum_probs=142.1
Q ss_pred CCchHHHHHHhcCChHHHHHHHhh-CchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCcc-----ccccCC
Q 037875 23 HDDTVLHMATYFKRDDLALKLLDE-IPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLL-----GMRNNN 96 (204)
Q Consensus 23 ~~~~~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~-----~~~~~~ 96 (204)
.|.||||+|+..|+.+++++|++. |.+ ++.++..|.||||+|+..|+ .+++++|++.++ ++ +..+..
T Consensus 2 ~g~t~L~~A~~~g~~~~v~~Ll~~~g~~-----~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~~~-~~~~~~~~~~~~~ 74 (232)
T 2rfa_A 2 IWESPLLLAAKENDVQALSKLLKFEGCE-----VHQRGAMGETALHIAALYDN-LEAAMVLMEAAP-ELVFEPMTSELYE 74 (232)
T ss_dssp CTTCHHHHHHHTTCHHHHHHHHTTTCSC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHHHCG-GGGGCCCCSTTTT
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHhcCCC-----cccCCCCCCCHHHHHHHcCC-HHHHHHHHHcCc-hhccccccccCCC
Confidence 489999999999999999999996 555 88999999999999999999 999999999987 44 556778
Q ss_pred CCcHHHHHHHcCCHHHHHHHHhcccCCCCCCC------CccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCC
Q 037875 97 GETALFRSARYGKADIFNFLAGKIADYDQPSK------QPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMD 170 (204)
Q Consensus 97 ~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~------~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~ 170 (204)
|.||||+|+..|+.+++++|+++|++++.... ..+..+..|.||||+|+..|+.+++++|++ .|++++.+|..
T Consensus 75 g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~ 153 (232)
T 2rfa_A 75 GQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIE-HGADIRAQDSL 153 (232)
T ss_dssp TCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCTTCSCCCCSSHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTT
T ss_pred CcCHHHHHHHcCCHHHHHHHHhCCCCCCcccCCcceeecccccccCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCC
Confidence 99999999999999999999999999876321 112234479999999999999999999999 69999999999
Q ss_pred CCCHhHHhccCC--cch----hhhhhccchh
Q 037875 171 GMTALQLLSCKP--EAF----KLKQERGFFK 195 (204)
Q Consensus 171 g~t~l~~a~~~~--~~~----~~~~~~g~~~ 195 (204)
|.||||+|+..+ ++. +.+++.|...
T Consensus 154 g~t~L~~A~~~~~~~~~~~i~~~Ll~~g~~~ 184 (232)
T 2rfa_A 154 GNTVLHILILQPNKTFACQMYNLLLSYDGGD 184 (232)
T ss_dssp SCCHHHHHHTCSCHHHHHHHHHHHHHTTCSC
T ss_pred CCCHHHHHHHcCChHHHHHHHHHHHhcCCch
Confidence 999999999665 333 7777777644
No 46
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.97 E-value=3e-30 Score=176.09 Aligned_cols=144 Identities=23% Similarity=0.175 Sum_probs=132.8
Q ss_pred CchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHH
Q 037875 24 DDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFR 103 (204)
Q Consensus 24 ~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~ 103 (204)
..++|+.|+..|+.+++++|++.|.+ ++ .+..|.||||+|+..++ .+++++|++.+. +++..+..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~Ll~~g~~-----~~-~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~~ 73 (153)
T 1awc_B 2 LGKKLLEAARAGQDDEVRILMANGAP-----FT-TDWLGTSPLHLAAQYGH-FSTTEVLLRAGV-SRDARTKVDRTPLHM 73 (153)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHHTCC-----CC-CCTTCCCHHHHHHHHTC-HHHHHHHHTTTC-CTTCCCTTCCCHHHH
T ss_pred ccHHHHHHHHcCCHHHHHHHHHcCCC-----CC-cCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCCCCCCCCCHHHH
Confidence 46899999999999999999998775 33 57889999999999999 999999999997 889999999999999
Q ss_pred HHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccCCc
Q 037875 104 SARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCKPE 183 (204)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~~~ 183 (204)
|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++++.++..|.||+++|+.++.
T Consensus 74 A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~ 145 (153)
T 1awc_B 74 AASEGHANIVEVLLKHGADVNA-------KDMLKMTALHWATEHNHQEVVELLIK-YGADVHTQSKFCKTAFDISIDNGN 145 (153)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred HHHcChHHHHHHHHHcCCCCCC-------CCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccccCCCCCCHHHHHHHcCC
Confidence 9999999999999999998876 58899999999999999999999999 699999999999999999986553
No 47
>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}
Probab=99.97 E-value=9.5e-31 Score=195.88 Aligned_cols=176 Identities=14% Similarity=0.011 Sum_probs=154.1
Q ss_pred HHHHHHHHhhhccccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 4 KVIEVCRKISDHALHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
+..++.++|.+.+.+..+..|.||||+|+..|+.+++++|++.|++ ++.. +|.||||+|+..++ .+++++|+
T Consensus 11 ~~~~v~~lL~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~--~g~t~L~~A~~~g~-~~~v~~Ll 82 (285)
T 3kea_A 11 KSKQLKSFLSSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGAL-----KNLL--ENEFPLHQAATLED-TKIVKILL 82 (285)
T ss_dssp CHHHHHHHHHSTTTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGG-----GSCC--TTCCHHHHHTTSSS-CHHHHHHH
T ss_pred CHHHHHHHHHhCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCC-----CCCC--CCCCHHHHHHHcCC-HHHHHHHH
Confidence 4567788888888888999999999999999999999999997766 5655 48999999999999 89999999
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCC-ccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQ-STVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g-~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
+.|+ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..| .||||+|+..|+.+++++|++ .|+
T Consensus 83 ~~ga-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~-------~~~~g~~t~L~~A~~~~~~~~v~~Ll~-~g~ 153 (285)
T 3kea_A 83 FSGL-DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF-------YGKTGWKTSFYHAVMLNDVSIVSYFLS-EIP 153 (285)
T ss_dssp HTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGG-------CSSSGGGSHHHHHHHTTCHHHHHHHHT-TSC
T ss_pred HCCC-CCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCc-------cCCCCCCCHHHHHHHcCCHHHHHHHHh-CCC
Confidence 9998 8999999999999999999999999999999998776 57888 799999999999999999999 587
Q ss_pred hhcccCCCCCCHhHHhccC--Ccchhhhhhccchhhh
Q 037875 163 LIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKKL 197 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~~ 197 (204)
+.... ..|.||||+|+.. .++.+.+++.|.....
T Consensus 154 ~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~ 189 (285)
T 3kea_A 154 STFDL-AILLSCIHITIKNGHVDMMILLLDYMTSTNT 189 (285)
T ss_dssp TTCCC-STHHHHHHHHHHTTCHHHHHHHHHHHHHTCT
T ss_pred ccccc-cCCccHHHHHHHcChHHHHHHHHHcCCCCCc
Confidence 77433 3899999999854 5778888887765443
No 48
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.97 E-value=2.8e-30 Score=180.69 Aligned_cols=161 Identities=16% Similarity=0.117 Sum_probs=142.7
Q ss_pred cCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHH
Q 037875 22 VHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETAL 101 (204)
Q Consensus 22 ~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l 101 (204)
.++.++|+.|+..|+.+++++|++.+.. .++..+..|.||||+|+..++ .+++++|++.++ +++..+..|.|||
T Consensus 3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~L 76 (179)
T 3f6q_A 3 PEFMDDIFTQCREGNAVAVRLWLDNTEN----DLNQGDDHGFSPLHWACREGR-SAVVEMLIMRGA-RINVMNRGDDTPL 76 (179)
T ss_dssp ----CCHHHHHHHTCHHHHHHHHHCTTS----CTTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTCCCHH
T ss_pred HHHHHHHHHHHHcCCHHHHHHHHhcCcc----cccccCCCCCCHHHHHHHcCc-HHHHHHHHHcCC-CCCCcCCCCCCHH
Confidence 4678999999999999999999997432 388899999999999999999 999999999997 8999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc-
Q 037875 102 FRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC- 180 (204)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~- 180 (204)
|+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++++.++..|.||+++|+.
T Consensus 77 ~~A~~~~~~~~v~~Ll~~g~~~~~-------~d~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~~ 148 (179)
T 3f6q_A 77 HLAASHGHRDIVQKLLQYKADINA-------VNEHGNVPLHYACFWGQDQVAEDLVA-NGALVSICNKYGEMPVDKAKAP 148 (179)
T ss_dssp HHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCSSBCCTTSCCGGGGSCHH
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCc-------cCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCcchhccCCCCcHHHHHHH
Confidence 999999999999999999998887 58899999999999999999999999 699999999999999999974
Q ss_pred -CCcchhhhhhccchhh
Q 037875 181 -KPEAFKLKQERGFFKK 196 (204)
Q Consensus 181 -~~~~~~~~~~~g~~~~ 196 (204)
+.++.+.+++.|....
T Consensus 149 ~~~~~~~~L~~~g~~~~ 165 (179)
T 3f6q_A 149 LRELLRERAEKMGQNLN 165 (179)
T ss_dssp HHHHHHHHHHHTTCCCS
T ss_pred HHHHHHHHHHHhhcCcc
Confidence 4567777777776543
No 49
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=6.2e-30 Score=201.83 Aligned_cols=114 Identities=27% Similarity=0.357 Sum_probs=51.1
Q ss_pred cccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCC
Q 037875 56 TRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRN 135 (204)
Q Consensus 56 ~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~ 135 (204)
+..+..|.||||+|+..++ .+++++|++++. +++.++..|.||||+|+..|+.+++++|+++|++++. ++.
T Consensus 272 ~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~-------~~~ 342 (437)
T 1n11_A 272 NLGNKSGLTPLHLVAQEGH-VPVADVLIKHGV-MVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNA-------KTK 342 (437)
T ss_dssp TCCCTTCCCHHHHHHHHTC-HHHHHHHHHHTC-CTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTC-------CCT
T ss_pred CCCCCCCCCHHHHHHHcCC-HHHHHHHHhCCc-cCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCC-------CCC
Confidence 3334444444444444444 344444444443 3444444444444444444444444444444444333 244
Q ss_pred CCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc
Q 037875 136 DQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS 179 (204)
Q Consensus 136 ~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~ 179 (204)
.|+||||+|+..|+.+++++|++ .|++++.+|.+|.||+++|.
T Consensus 343 ~g~t~L~~A~~~g~~~iv~~Ll~-~ga~~~~~~~~g~t~l~~A~ 385 (437)
T 1n11_A 343 LGYSPLHQAAQQGHTDIVTLLLK-NGASPNEVSSDGTTPLAIAK 385 (437)
T ss_dssp TSCCHHHHHHHTTCHHHHHHHHH-TTCCSCCCCSSSCCHHHHHH
T ss_pred CCCCHHHHHHHCChHHHHHHHHH-CcCCCCCCCCCCCCHHHHHH
Confidence 44444444444444444444444 34444444444444444444
No 50
>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}
Probab=99.97 E-value=1.1e-29 Score=194.45 Aligned_cols=171 Identities=19% Similarity=0.184 Sum_probs=129.6
Q ss_pred HHHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|+++|.++ .+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|
T Consensus 70 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~iv~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~L 143 (351)
T 3utm_A 70 RVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGAC-----VNAMDLWQFTPLHEAASKNR-VEVCSLL 143 (351)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTC-HHHHHHH
T ss_pred CHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 356677777777654 355677777777777777777777775554 55666666666666666665 5666655
Q ss_pred HhhCCC--------------------------------------------------------------------------
Q 037875 83 LRKAPG-------------------------------------------------------------------------- 88 (204)
Q Consensus 83 l~~~~~-------------------------------------------------------------------------- 88 (204)
++.++.
T Consensus 144 l~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~ 223 (351)
T 3utm_A 144 LSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLH 223 (351)
T ss_dssp HHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHHHHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCS
T ss_pred HHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcccHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhC
Confidence 554331
Q ss_pred ---------------ccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHH
Q 037875 89 ---------------LLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELA 153 (204)
Q Consensus 89 ---------------~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~ 153 (204)
+++.++..|.||||+|+..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++
T Consensus 224 ~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~-------~d~~g~t~L~~A~~~~~~~~v 296 (351)
T 3utm_A 224 PKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA-------LDSLGQTALHRAALAGHLQTC 296 (351)
T ss_dssp TTHHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHTCHHHH
T ss_pred ccHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------cCCCCCCHHHHHHHcCcHHHH
Confidence 4555677889999999999999999999999988876 689999999999999999999
Q ss_pred HHHHHHhchhhcccCCCCCCHhHHhccCCcchhhhhhc
Q 037875 154 LEIAKEYKYLIGEKDMDGMTALQLLSCKPEAFKLKQER 191 (204)
Q Consensus 154 ~~Ll~~~g~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~ 191 (204)
++|++ .|++++.+|..|.||+++|. ..+.+.+.+.
T Consensus 297 ~~Ll~-~gad~~~~~~~g~tal~~a~--~~~~~~l~~~ 331 (351)
T 3utm_A 297 RLLLS-YGSDPSIISLQGFTAAQMGN--EAVQQILSES 331 (351)
T ss_dssp HHHHH-TTCCTTCCCTTSCCHHHHSC--HHHHHHHHHC
T ss_pred HHHHH-cCCCCCCcCCCCCChhhhhh--HHHHHHHHhc
Confidence 99999 69999999999999999983 3344444333
No 51
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=3.8e-30 Score=199.44 Aligned_cols=178 Identities=20% Similarity=0.169 Sum_probs=88.1
Q ss_pred HHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhC
Q 037875 9 CRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKA 86 (204)
Q Consensus 9 ~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~ 86 (204)
++.+++.|++++ +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|++.+
T Consensus 149 ~~~ll~~ga~vn~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~-----~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~~ 222 (373)
T 2fo1_E 149 AKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGAD-----PTIYNKSERSALHQAAANRD-FGMMVYMLNST 222 (373)
T ss_dssp HHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTCCCHHHHHHHTTC-HHHHHHHTTSH
T ss_pred HHHHHhcCCCCcCCCCCCCCHHHHHHHcChHHHHHHHHHCCCC-----CcccCCCCCCHHHHHHHCCC-HHHHHHHHhcC
Confidence 344555554432 44556666666666666666666654443 44444455555555555554 45555554443
Q ss_pred C--CccccccCCCCcHHHHHHHcC---CHHHHHHHHhcccCCCCCC----------------------------------
Q 037875 87 P--GLLGMRNNNGETALFRSARYG---KADIFNFLAGKIADYDQPS---------------------------------- 127 (204)
Q Consensus 87 ~--~~~~~~~~~~~t~l~~a~~~~---~~~~~~~L~~~~~~~~~~~---------------------------------- 127 (204)
. .+++..+..|.||||+|+..+ +.+++++|++.|++++...
T Consensus 223 ~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~ 302 (373)
T 2fo1_E 223 KLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEK 302 (373)
T ss_dssp HHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHS
T ss_pred ccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhc
Confidence 1 134444444444444444444 3444444444444443211
Q ss_pred -CCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccc
Q 037875 128 -KQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGF 193 (204)
Q Consensus 128 -~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~ 193 (204)
.+++.++..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+.+ .++.+.+++.+.
T Consensus 303 ~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a 370 (373)
T 2fo1_E 303 GSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQ-QGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRP 370 (373)
T ss_dssp CCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHH-TTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC-
T ss_pred CCCccCcCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCc
Confidence 0011145555666666666666666655555 3666666666666666666533 344444444443
No 52
>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1
Probab=99.97 E-value=1e-29 Score=200.60 Aligned_cols=178 Identities=19% Similarity=0.136 Sum_probs=162.4
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|+++|.++. +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|
T Consensus 191 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~g~-~~~v~~L 264 (437)
T 1n11_A 191 NLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS-----ANAESVQGVTPLHLAAQEGH-AEMVALL 264 (437)
T ss_dssp CHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTC-HHHHHHH
T ss_pred CHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHCCC-HHHHHHH
Confidence 4689999999998754 56799999999999999999999997766 78889999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.++ +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++ .|+
T Consensus 265 l~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga 335 (437)
T 1n11_A 265 LSKQA-NGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDA-------TTRMGYTPLHVASHYGNIKLVKFLLQ-HQA 335 (437)
T ss_dssp HTTTC-CTTCCCTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTC-------CCSSCCCHHHHHHHSSCSHHHHHHHH-TTC
T ss_pred HhcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCccCCC-------CCCCCCCHHHHHHHcCcHHHHHHHHh-cCC
Confidence 99998 8889999999999999999999999999999999887 58899999999999999999999999 699
Q ss_pred hhcccCCCCCCHhHHhccC--Ccchhhhhhccchhhh
Q 037875 163 LIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKKL 197 (204)
Q Consensus 163 ~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~~ 197 (204)
+++.++..|.||||+|+.. .++.+.+++.|.....
T Consensus 336 d~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~ 372 (437)
T 1n11_A 336 DVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE 372 (437)
T ss_dssp CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred CCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCC
Confidence 9999999999999999854 5788888888876543
No 53
>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}
Probab=99.97 E-value=6.5e-30 Score=197.34 Aligned_cols=175 Identities=15% Similarity=0.084 Sum_probs=154.5
Q ss_pred HHHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
.++++++|+++|.++ .+..|.||||+|+..|+.+++++|++.|++ ..+..|.||||+|+..++ .+++++|
T Consensus 32 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-------~~~~~g~t~L~~A~~~g~-~~~v~~L 103 (364)
T 3ljn_A 32 QTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEV-------HSLWHGQKPIHLAVMANK-TDLVVAL 103 (364)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHCCHHHHHHHHHHCCC-------CCCBTTBCHHHHHHHTTC-HHHHHHH
T ss_pred CHHHHHHHHHcCCCccccCCCCCcHHHHHHHcCCHHHHHHHHHCCCC-------ccccCCCCHHHHHHHcCC-HHHHHHH
Confidence 468899999998765 467899999999999999999999998764 234579999999999999 9999999
Q ss_pred Hhh----CCCcccc-----------------ccCCCCcHHHHHHHcC--CHHHHHHHHhcccCCCCCCCCccccCCCCcc
Q 037875 83 LRK----APGLLGM-----------------RNNNGETALFRSARYG--KADIFNFLAGKIADYDQPSKQPFLQRNDQST 139 (204)
Q Consensus 83 l~~----~~~~~~~-----------------~~~~~~t~l~~a~~~~--~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t 139 (204)
++. +. +++. .+..|.||||+|+..| +.+++++|++.|++++. ++..|.|
T Consensus 104 l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~~~v~~Ll~~ga~~~~-------~d~~g~t 175 (364)
T 3ljn_A 104 VEGAKERGQ-MPESLLNECDEREVNEIGSHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA-------KDKADET 175 (364)
T ss_dssp HHHHHHHTC-CHHHHHTCCCCCCEEEETTEEEEESCCCHHHHHHHSCGGGHHHHHHHHHHTCCTTC-------CCTTSCC
T ss_pred HHhccccCC-CHHHHHhhcchHhhhhhccccCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCCcc-------cCCCCCC
Confidence 998 65 5555 7888999999999999 99999999999999887 5889999
Q ss_pred HHHHHHHhCCHHHHHHHHHHhchh-----hcccCCCCCCHhHHhccC--Ccchhhhhhccchhh
Q 037875 140 VLHMAVISQHFELALEIAKEYKYL-----IGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKK 196 (204)
Q Consensus 140 ~l~~a~~~~~~~~~~~Ll~~~g~~-----~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~ 196 (204)
|||+|+..|+.+++++|++ .|++ ++..+..|.||||+|+.. .++.+.+++.|+...
T Consensus 176 ~L~~A~~~g~~~~v~~Ll~-~g~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~~ 238 (364)
T 3ljn_A 176 PLMRAMEFRNREALDLMMD-TVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVN 238 (364)
T ss_dssp HHHHHHHTTCHHHHHHHHH-HCSCSSSCCTTCCCTTCCCTTHHHHTTTCHHHHHHHHTTTCCTT
T ss_pred HHHHHHHcCCHHHHHHHHh-cccccccccccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence 9999999999999999999 5888 999999999999999855 478888888886643
No 54
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.97 E-value=2.1e-29 Score=183.33 Aligned_cols=185 Identities=20% Similarity=0.233 Sum_probs=134.1
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
-.+++++|++.|.+++ +..|.||||+|+..|+.+++++|++.|++. ....+..|.||||+|+..++ .+++++|
T Consensus 21 ~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~----~~~~~~~~~t~L~~A~~~~~-~~~v~~L 95 (240)
T 3eu9_A 21 IYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIV----DQLGGDLNSTPLHWATRQGH-LSMVVQL 95 (240)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCT----TCCBTTTTBCHHHHHHHHTC-HHHHHHH
T ss_pred ChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcc----hhhcCCcCCChhHHHHHcCC-HHHHHHH
Confidence 3567778888776653 556778888888888888888888866652 22333447777777777777 7777777
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCC---------------------------CCccccCC
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPS---------------------------KQPFLQRN 135 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~---------------------------~~~~~~~~ 135 (204)
++.+. +++..+..|.||||+|+..|+.+++++|++.|++++... .+++..+.
T Consensus 96 l~~g~-~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~ 174 (240)
T 3eu9_A 96 MKYGA-DPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDK 174 (240)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCT
T ss_pred HHcCC-CCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHhcCCCcchhhc
Confidence 77776 667777777777777777777777777777776654321 11233454
Q ss_pred -CCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccchhh
Q 037875 136 -DQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKK 196 (204)
Q Consensus 136 -~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~ 196 (204)
.|.||||+|+..|+.+++++|++ .|++++.++..|.||+++|+.. .++.+.+++.+..+.
T Consensus 175 ~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~ 237 (240)
T 3eu9_A 175 YHKNTALHWAVLAGNTTVISLLLE-AGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAKG 237 (240)
T ss_dssp TTCCCHHHHHHHHTCHHHHHHHHH-HTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC----
T ss_pred cCCCcHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhccC
Confidence 78899999999999999999998 5999999999999999999844 567777777765543
No 55
>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1
Probab=99.97 E-value=1.2e-29 Score=196.72 Aligned_cols=151 Identities=15% Similarity=0.147 Sum_probs=128.7
Q ss_pred HHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHh
Q 037875 39 LALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAG 118 (204)
Q Consensus 39 ~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~ 118 (204)
.++.|++.|++ ++..|..|.||||+|+..|+ .+++++|++.++ +++..+..|.||||+|+..|+.+++++|++
T Consensus 148 ~~~~ll~~ga~-----vn~~d~~g~TpL~~A~~~g~-~~iv~~Ll~~ga-~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~ 220 (373)
T 2fo1_E 148 EAKECIAAGAD-----VNAMDCDENTPLMLAVLARR-RRLVAYLMKAGA-DPTIYNKSERSALHQAAANRDFGMMVYMLN 220 (373)
T ss_dssp HHHHHHHTCCC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTC-CSCCCCTTCCCHHHHHHHTTCHHHHHHHTT
T ss_pred HHHHHHhcCCC-----CcCCCCCCCCHHHHHHHcCh-HHHHHHHHHCCC-CCcccCCCCCCHHHHHHHCCCHHHHHHHHh
Confidence 46788897766 88999999999999999999 999999999998 899999999999999999999999999999
Q ss_pred cc---cCCCCCC-----------------------------CCccc--------cCCCCccHHHHHHHhCCHHHHHHHHH
Q 037875 119 KI---ADYDQPS-----------------------------KQPFL--------QRNDQSTVLHMAVISQHFELALEIAK 158 (204)
Q Consensus 119 ~~---~~~~~~~-----------------------------~~~~~--------~~~~g~t~l~~a~~~~~~~~~~~Ll~ 158 (204)
.+ ++++... .+++. ++..|.||||+|+..|+.+++++|++
T Consensus 221 ~~~~~~~~~~~d~~g~t~L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~ 300 (373)
T 2fo1_E 221 STKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300 (373)
T ss_dssp SHHHHHTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHH
T ss_pred cCccccChhhcCCCCCCHHHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHH
Confidence 87 5554321 11222 45589999999999999999999998
Q ss_pred HhchhhcccCCCCCCHhHHhcc--CCcchhhhhhccchhh
Q 037875 159 EYKYLIGEKDMDGMTALQLLSC--KPEAFKLKQERGFFKK 196 (204)
Q Consensus 159 ~~g~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g~~~~ 196 (204)
..|++++.+|..|.||||+|+. +.++++.+++.|....
T Consensus 301 ~~~~~~n~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gad~~ 340 (373)
T 2fo1_E 301 EKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVE 340 (373)
T ss_dssp HSCCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSS
T ss_pred hcCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcc
Confidence 6569999999999999999984 4578888888886543
No 56
>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1
Probab=99.97 E-value=5.9e-29 Score=186.91 Aligned_cols=169 Identities=22% Similarity=0.250 Sum_probs=147.7
Q ss_pred cCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHH
Q 037875 22 VHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETAL 101 (204)
Q Consensus 22 ~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l 101 (204)
..+.||||.||..|+.+++++|++.|++ ++..+..|.||||+|+..|+ .+++++|++.|+ +++..+..|.|||
T Consensus 38 ~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~ga-~~~~~~~~g~tpL 110 (299)
T 1s70_B 38 FDDGAVFLAACSSGDTEEVLRLLERGAD-----INYANVDGLTALHQACIDDN-VDMVKFLVENGA-NINQPDNEGWIPL 110 (299)
T ss_dssp ECHHHHHHHHHHHTCHHHHHHHHHHCCC-----TTCBCTTCCBHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTSCCHH
T ss_pred cCCccHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHHcCC-HHHHHHHHHCCC-CCCCCCCCCCcHH
Confidence 3578999999999999999999997766 88899999999999999999 999999999998 8999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcccCCCCCCCC----------------------------------------------------
Q 037875 102 FRSARYGKADIFNFLAGKIADYDQPSKQ---------------------------------------------------- 129 (204)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~---------------------------------------------------- 129 (204)
|+|+..|+.+++++|+++|++++.....
T Consensus 111 ~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 190 (299)
T 1s70_B 111 HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHI 190 (299)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHHTCC
T ss_pred HHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHHHHHHHHhccCc
Confidence 9999999999999999999987653211
Q ss_pred -ccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc--CCcchhhhhhccchhhhh
Q 037875 130 -PFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC--KPEAFKLKQERGFFKKLL 198 (204)
Q Consensus 130 -~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g~~~~~~ 198 (204)
....+..|.||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+. +.++.+.+++.|......
T Consensus 191 ~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~ 261 (299)
T 1s70_B 191 NDVRHAKSGGTALHVAAAKGYTEVLKLLIQ-ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV 261 (299)
T ss_dssp CCCCCTTTCCCHHHHHHHHTCHHHHHHHHT-TTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC
T ss_pred chhhhcCCCCCHHHHHHHCCcHHHHHHHHH-cCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCc
Confidence 00134578999999999999999999998 699999999999999999984 457888888888765443
No 57
>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E
Probab=99.97 E-value=1.6e-30 Score=189.46 Aligned_cols=173 Identities=20% Similarity=0.214 Sum_probs=145.5
Q ss_pred ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCC
Q 037875 19 VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGE 98 (204)
Q Consensus 19 ~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 98 (204)
..+.+|.||||+|+..|+.+++++|++.+.. .+..++..+..|.||||+|+..++ .+++++|++.|+ +++..+..|.
T Consensus 3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~-~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~ 79 (236)
T 1ikn_D 3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKG-DLAFLNFQNNLQQTPLHLAVITNQ-PEIAEALLGAGC-DPELRDFRGN 79 (236)
T ss_dssp ----CCCCTTHHHHHTTCSSSSSCCCC------CCCCCCCCTTCCCHHHHHHHTTC-HHHHHCCCSCCC-CSCCCCTTCC
T ss_pred cCCCCCCchhHHHHHcCChhHHHHHHHHhhc-cHHHhhccCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCCcCCCCC
Confidence 3578899999999999999999999997764 344588999999999999999999 999999999997 8999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCC-CCCCHhHH
Q 037875 99 TALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDM-DGMTALQL 177 (204)
Q Consensus 99 t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~-~g~t~l~~ 177 (204)
||||+|+..|+.+++++|++.+.+... ....+..+..|.||||+|+..|+.+++++|++ .|++++.++. .|.||||+
T Consensus 80 t~L~~A~~~~~~~~v~~Ll~~~~~~~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~~g~tpL~~ 157 (236)
T 1ikn_D 80 TPLHLACEQGCLASVGVLTQSCTTPHL-HSILKATNYNGHTCLHLASIHGYLGIVELLVS-LGADVNAQEPCNGRTALHL 157 (236)
T ss_dssp CHHHHHHHHTCHHHHHHHHHSTTTTSS-SCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTTCCCHHHH
T ss_pred CHHHHHHHcCCHHHHHHHHhcccchhH-HHHhhccCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCCHHHH
Confidence 999999999999999999999876432 11234467889999999999999999999999 6999999997 99999999
Q ss_pred hcc--CCcchhhhhhccchhh
Q 037875 178 LSC--KPEAFKLKQERGFFKK 196 (204)
Q Consensus 178 a~~--~~~~~~~~~~~g~~~~ 196 (204)
|+. +.++.+.+++.|....
T Consensus 158 A~~~~~~~~v~~Ll~~ga~~~ 178 (236)
T 1ikn_D 158 AVDLQNPDLVSLLLKCGADVN 178 (236)
T ss_dssp HHHTTCHHHHHHHHTTTCCSC
T ss_pred HHHcCCHHHHHHHHHcCCCCC
Confidence 985 4578888888876543
No 58
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.96 E-value=2.8e-29 Score=171.64 Aligned_cols=150 Identities=20% Similarity=0.219 Sum_probs=134.4
Q ss_pred CchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHH
Q 037875 24 DDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFR 103 (204)
Q Consensus 24 ~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~ 103 (204)
+.++||.|+..|+.+++++|++. . +..++..+..|.||||+ +..++ .+++++|++.+. +++.++..|.||||+
T Consensus 2 ~~~~L~~A~~~g~~~~v~~ll~~-~---~~~~~~~~~~g~t~L~~-~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~~ 74 (156)
T 1bd8_A 2 AGDRLSGAAARGDVQEVRRLLHR-E---LVHPDALNRFGKTALQV-MMFGS-TAIALELLKQGA-SPNVQDTSGTSPVHD 74 (156)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHHT-T---CCCTTCCCTTSCCHHHH-SCTTC-HHHHHHHHHTTC-CTTCCCTTSCCHHHH
T ss_pred cchHHHHHHHhCCHHHHHHHHHh-h---CcCccccCCCCCcHHHH-HHcCC-HHHHHHHHHCCC-CCCCcCCCCCCHHHH
Confidence 56899999999999999999996 2 12378889999999999 88998 899999999998 899999999999999
Q ss_pred HHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccCC-
Q 037875 104 SARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCKP- 182 (204)
Q Consensus 104 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~~- 182 (204)
|+..|+.+++++|++.|++++. ++..|+||||+|+..|+.+++++|++ . ++++.++..|.|||++|+..+
T Consensus 75 A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~-~-~~~~~~~~~g~t~l~~A~~~~~ 145 (156)
T 1bd8_A 75 AARTGFLDTLKVLVEHGADVNV-------PDGTGALPIHLAVQEGHTAVVSFLAA-E-SDLHRRDARGLTPLELALQRGA 145 (156)
T ss_dssp HHHTTCHHHHHHHHHTTCCSCC-------CCTTSCCHHHHHHHHTCHHHHHHHHT-T-SCTTCCCTTSCCHHHHHHHSCC
T ss_pred HHHcCcHHHHHHHHHcCCCCCC-------cCCCCCcHHHHHHHhChHHHHHHHHh-c-cCCCCcCCCCCCHHHHHHHcCc
Confidence 9999999999999999998876 58899999999999999999999998 4 999999999999999998554
Q ss_pred -cchhhhh
Q 037875 183 -EAFKLKQ 189 (204)
Q Consensus 183 -~~~~~~~ 189 (204)
++.+.++
T Consensus 146 ~~~v~~Ll 153 (156)
T 1bd8_A 146 QDLVDILQ 153 (156)
T ss_dssp HHHHHHHH
T ss_pred HHHHHHHH
Confidence 5555543
No 59
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.96 E-value=6.3e-30 Score=175.09 Aligned_cols=145 Identities=17% Similarity=0.020 Sum_probs=116.3
Q ss_pred ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCC
Q 037875 19 VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGE 98 (204)
Q Consensus 19 ~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 98 (204)
..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+ .++ .+++++|++.++ +++.++..|.
T Consensus 7 ~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~-~~~-~~~v~~Ll~~g~-~~~~~d~~g~ 78 (156)
T 1bi7_B 7 SSMEPSADWLATAAARGRVEEVRALLEAGAN-----PNAPNSYGRRPIQVMM-MGS-ARVAELLLLHGA-EPNCADPATL 78 (156)
T ss_dssp ---CCSTTHHHHHHHHTCHHHHHHHHTTTCC-----TTCCCSSSCCTTTSSC-TTC-HHHHHHHHTTTC-CCCCCCTTTC
T ss_pred CCCccchHHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHH-cCC-HHHHHHHHHcCC-CCCCcCCCCC
Confidence 3567799999999999999999999997765 8889999999999985 788 899999999997 8999999999
Q ss_pred c-HHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHH
Q 037875 99 T-ALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQL 177 (204)
Q Consensus 99 t-~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~ 177 (204)
| |||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++ .|++++.++..|.||.+-
T Consensus 79 ttpL~~A~~~~~~~~v~~Ll~~ga~~~~-------~d~~g~tpl~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~~~~ 150 (156)
T 1bi7_B 79 TRPVHDAAREGFLDTLVVLHRAGARLDV-------RDAWGRLPVDLAEELGHRDVARYLRA-AAGGTRGSNHARIDAAEG 150 (156)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHHTCCSSC-------CCTTCCCHHHHHHHHTCHHHHHHHSS-CC----------------
T ss_pred cHHHHHHHHCCCHHHHHHHHHcCCCCcc-------cCCCCCCHHHHHHHhCHHHHHHHHHH-cCCCCCccCcCcCccccc
Confidence 9 99999999999999999999999887 58899999999999999999999998 699999999999999875
Q ss_pred hc
Q 037875 178 LS 179 (204)
Q Consensus 178 a~ 179 (204)
+.
T Consensus 151 ~~ 152 (156)
T 1bi7_B 151 PS 152 (156)
T ss_dssp --
T ss_pred CC
Confidence 43
No 60
>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}
Probab=99.96 E-value=1.4e-28 Score=178.88 Aligned_cols=162 Identities=16% Similarity=0.131 Sum_probs=141.4
Q ss_pred cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCc
Q 037875 20 LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGET 99 (204)
Q Consensus 20 ~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t 99 (204)
.+..+.++|+.|+..|+.+++++|++.|.+ ++..+..|.||||+|+..++ .+++++|++.+.......+..|.|
T Consensus 5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~t 78 (240)
T 3eu9_A 5 IDDYSTWDIVKATQYGIYERCRELVEAGYD-----VRQPDKENVTLLHWAAINNR-IDLVKYYISKGAIVDQLGGDLNST 78 (240)
T ss_dssp CSCGGGCCHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTCCTTCCBTTTTBC
T ss_pred cccccchHHHHHHHcCChHHHHHHHHcCCC-----cCCCCCCCCCHHHHHHHhCC-HHHHHHHHHcCCcchhhcCCcCCC
Confidence 467789999999999999999999997766 78889999999999999999 999999999998433344556999
Q ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc
Q 037875 100 ALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS 179 (204)
Q Consensus 100 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~ 179 (204)
|||+|+..|+.+++++|++.|++++. ++..|.||||+|+..|+.+++++|++ .|++++.++..|.|||++|+
T Consensus 79 ~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~l~~A~~~~~~~~~~~Ll~-~~~~~~~~~~~g~t~l~~a~ 150 (240)
T 3eu9_A 79 PLHWATRQGHLSMVVQLMKYGADPSL-------IDGEGCSCIHLAAQFGHTSIVAYLIA-KGQDVDMMDQNGMTPLMWAA 150 (240)
T ss_dssp HHHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHH
T ss_pred hhHHHHHcCCHHHHHHHHHcCCCCcc-------cCCCCCCHHHHHHHcCHHHHHHHHHh-cCCCccccCCCCCcHHHHHH
Confidence 99999999999999999999998876 57889999999999999999999999 69999999999999999998
Q ss_pred cC---Ccchhhhhhccchh
Q 037875 180 CK---PEAFKLKQERGFFK 195 (204)
Q Consensus 180 ~~---~~~~~~~~~~g~~~ 195 (204)
.. .++.+.+...|...
T Consensus 151 ~~~~~~~~~~~L~~~~~~~ 169 (240)
T 3eu9_A 151 YRTHSVDPTRLLLTFNVSV 169 (240)
T ss_dssp HHCCSSTTHHHHHHTTCCT
T ss_pred HhCChHHHHHHHHhcCCCc
Confidence 32 45666666666543
No 61
>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A
Probab=99.96 E-value=2.6e-29 Score=185.07 Aligned_cols=166 Identities=15% Similarity=0.034 Sum_probs=136.4
Q ss_pred CCchHHHHHHhcCChH----HHHHHHhhCchhhhhhhcc----cccCCCcHHHHHHhc---CCCHHHHHHHHhhCCCccc
Q 037875 23 HDDTVLHMATYFKRDD----LALKLLDEIPELYIHKMTR----QNKAGNTVLHATATS---SRALPVADKLLRKAPGLLG 91 (204)
Q Consensus 23 ~~~~~L~~A~~~~~~~----~v~~Ll~~g~~~~~~~~~~----~~~~g~~~l~~a~~~---~~~~~~~~~Ll~~~~~~~~ 91 (204)
.|.||||+|+..|+.+ ++++|++.|.+ ++. .+..|.||||+|+.. ++ .+++++|++.++ +++
T Consensus 1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~-----i~~~~~~~d~~g~t~L~~A~~~~~~g~-~~~v~~Ll~~g~-~~~ 73 (256)
T 2etb_A 1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKY-----LTDSAYTEGSTGKTCLMKAVLNLQDGV-NACIMPLLQIDK-DSG 73 (256)
T ss_dssp CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCC-----TTSGGGSBTTTTBCHHHHHHHTCBTTB-CTTHHHHHHHHH-HTT
T ss_pred CCccHHHHHHHcCCHHHHHHHHHHHHHcCCC-----cccccccCCCCCCCHHHHHHHccccch-HHHHHHHHhcCC-ccc
Confidence 3789999999999997 55667776655 777 799999999999999 98 899999999886 444
Q ss_pred c-----------ccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCC------ccccCCCCccHHHHHHHhCCHHHHH
Q 037875 92 M-----------RNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQ------PFLQRNDQSTVLHMAVISQHFELAL 154 (204)
Q Consensus 92 ~-----------~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~------~~~~~~~g~t~l~~a~~~~~~~~~~ 154 (204)
. .+..|.||||+|+..|+.+++++|+++|++++..... ....+..|.||||+|+..|+.++++
T Consensus 74 ~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~ 153 (256)
T 2etb_A 74 NPKPLVNAQCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVT 153 (256)
T ss_dssp CSSCGGGCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHH
T ss_pred chhhhcccccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHH
Confidence 2 2367999999999999999999999999998873210 0001112999999999999999999
Q ss_pred HHHHH--hchhhcccCCCCCCHhHHhcc--CCc---------chhhhhhccchh
Q 037875 155 EIAKE--YKYLIGEKDMDGMTALQLLSC--KPE---------AFKLKQERGFFK 195 (204)
Q Consensus 155 ~Ll~~--~g~~~~~~~~~g~t~l~~a~~--~~~---------~~~~~~~~g~~~ 195 (204)
+|++. .|++++.+|..|.||||+|+. ++. +.+.+++.|...
T Consensus 154 ~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~ 207 (256)
T 2etb_A 154 YLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207 (256)
T ss_dssp HHHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHhccccCCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCc
Confidence 99994 599999999999999999985 443 778888887665
No 62
>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A
Probab=99.96 E-value=1.5e-28 Score=168.90 Aligned_cols=143 Identities=17% Similarity=0.208 Sum_probs=129.6
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
.++++++|+++|.+++ +..|.||||+|+. |+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|
T Consensus 17 ~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~L 89 (162)
T 1ihb_A 17 DLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN-----PDLKDRTGFAVIHDAARAGF-LDTLQTL 89 (162)
T ss_dssp CHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHH
T ss_pred CHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 4688999999997754 6789999999999 999999999997766 88899999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCC-CCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADY-DQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK 161 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~-~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g 161 (204)
++.+. +++.++..|.||||+|+..|+.+++++|+++|++. +. ++..|.||||+|+..|+.+++++|++ .|
T Consensus 90 l~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-------~~~~g~t~l~~A~~~~~~~~~~~Ll~-~G 160 (162)
T 1ihb_A 90 LEFQA-DVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGH-------RNHKGDTACDLARLYGRNEVVSLMQA-NG 160 (162)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-TC
T ss_pred HHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCC-------cCCCCCcHHHHHHHcCCHHHHHHHHH-hC
Confidence 99997 89999999999999999999999999999999873 54 58899999999999999999999999 58
Q ss_pred hh
Q 037875 162 YL 163 (204)
Q Consensus 162 ~~ 163 (204)
+|
T Consensus 161 Ad 162 (162)
T 1ihb_A 161 AG 162 (162)
T ss_dssp --
T ss_pred CC
Confidence 75
No 63
>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*
Probab=99.96 E-value=3.1e-28 Score=168.75 Aligned_cols=140 Identities=21% Similarity=0.241 Sum_probs=130.1
Q ss_pred HHHHHHHhhhcccccc--ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL--TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
.++++++|+++|.+++ +..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|
T Consensus 26 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~~~~L 99 (169)
T 2y1l_E 26 RDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD-----VNAVDHAGMTPLRLAALFGH-LEIVEVL 99 (169)
T ss_dssp CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHH
T ss_pred CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 4788999999998764 67899999999999999999999997766 88899999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHH
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAK 158 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 158 (204)
++.++ +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||+++|+..|+.+++++|++
T Consensus 100 l~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~l~~A~~~~~~~~~~~L~~ 167 (169)
T 2y1l_E 100 LKNGA-DVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNA-------QDKFGKTAFDISIDNGNEDLAEILQK 167 (169)
T ss_dssp HHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred HHcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence 99998 8899999999999999999999999999999998876 58899999999999999999998887
No 64
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.6e-29 Score=184.68 Aligned_cols=171 Identities=13% Similarity=0.101 Sum_probs=126.4
Q ss_pred HHHHHHHhhhcccccc-ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL-TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~-~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
..+.++.++++|.+++ +..+.||||.|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|+
T Consensus 17 ~~~~~~~ll~~g~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll 90 (239)
T 1ycs_B 17 LRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDD-----PSLPNDEGITALHNAVCAGH-TEIVKFLV 90 (239)
T ss_dssp --------------------CHHHHHHHHHHTCHHHHHHHTSTTSS-----CCCCCTTSCCHHHHHHHHTC-HHHHHHHH
T ss_pred hHHHHHHHhccCCCcccCchhhHHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCC-HHHHHHHH
Confidence 4567788888888765 45678999999999999999999987665 78888889999999999998 89999999
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCc-cHHHHH--HHhCCHHHHHHHHHHh
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQS-TVLHMA--VISQHFELALEIAKEY 160 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~-t~l~~a--~~~~~~~~~~~Ll~~~ 160 (204)
++++ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..|. ||+|+| +..|+.+++++|+. .
T Consensus 91 ~~ga-~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~-~ 161 (239)
T 1ycs_B 91 QFGV-NVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFA-------MTYSDMQTAADKCEEMEEGYTQCSQFLYG-V 161 (239)
T ss_dssp HHTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCSSSCCCHHHHCCSSSTTCCCHHHHHHH-H
T ss_pred HcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcce-------ecCCCCcchHHHHHHhhhccHHHHHHHHH-h
Confidence 9887 7888888999999999999999999999999888776 355555 999988 77888899988888 5
Q ss_pred chhhccc---------CCCCCCHhHHhccCCcchhhhhh
Q 037875 161 KYLIGEK---------DMDGMTALQLLSCKPEAFKLKQE 190 (204)
Q Consensus 161 g~~~~~~---------~~~g~t~l~~a~~~~~~~~~~~~ 190 (204)
|++++.. +..+.++++++...+++.+.+..
T Consensus 162 ~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~~i~vl~~ 200 (239)
T 1ycs_B 162 QEKMGIMNKGVIYALWDYEPQNDDELPMKEGDCMTIIHR 200 (239)
T ss_dssp HHHTTTTGGGEEEESSCBCCSSTTBCCBCSSCEEEECCC
T ss_pred hhcccccccceEEEEeccCCCCCCcccccCCCEEEEEEe
Confidence 8887765 56688888888877776665543
No 65
>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}
Probab=99.96 E-value=3e-28 Score=173.02 Aligned_cols=162 Identities=15% Similarity=0.200 Sum_probs=143.5
Q ss_pred cCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHH
Q 037875 22 VHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETAL 101 (204)
Q Consensus 22 ~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l 101 (204)
..+.||||.|+..|+.+.++.|+..+.. .++..+..|.||||+|+..++ .+++++|++.++ +++..+..|.|||
T Consensus 3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~----~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~l 76 (201)
T 3hra_A 3 TYEVGALLEAANQRDTKKVKEILQDTTY----QVDEVDTEGNTPLNIAVHNND-IEIAKALIDRGA-DINLQNSISDSPY 76 (201)
T ss_dssp CCCTTHHHHHHHTTCHHHHHHHHTCTTC----CTTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCTTSCCHH
T ss_pred cccccHHHHHHHhccHHHHHHHHHcCCC----CCCCCCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCCCCCCCCCHH
Confidence 4688999999999999999999997652 388899999999999999999 999999999998 8999999999999
Q ss_pred HHHHHcCCHHHHHHHHhc-ccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc-hhhcccCCCCCCHhHHhc
Q 037875 102 FRSARYGKADIFNFLAGK-IADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK-YLIGEKDMDGMTALQLLS 179 (204)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g-~~~~~~~~~g~t~l~~a~ 179 (204)
|+|+..|+.+++++|++. +.+++. ++..|.||||+|+..|+.+++++|++. | ++++.++..|.||||+|+
T Consensus 77 ~~A~~~~~~~~~~~Ll~~~~~~~~~-------~~~~g~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~g~t~L~~A~ 148 (201)
T 3hra_A 77 LYAGAQGRTEILAYMLKHATPDLNK-------HNRYGGNALIPAAEKGHIDNVKLLLED-GREDIDFQNDFGYTALIEAV 148 (201)
T ss_dssp HHHHHTTCHHHHHHHHHHSCCCTTC-------CCTTSCCSHHHHHHTTCHHHHHHHHHH-CCCCTTCCCTTSCCHHHHHH
T ss_pred HHHHHcCCHHHHHHHHhccCccccc-------ccCCCCcHHHHHHHcCCHHHHHHHHHc-CCCCcCCCCCCCCCHHHHHH
Confidence 999999999999999954 556555 588999999999999999999999995 6 999999999999999998
Q ss_pred cC-------Ccchhhhhhccchhhh
Q 037875 180 CK-------PEAFKLKQERGFFKKL 197 (204)
Q Consensus 180 ~~-------~~~~~~~~~~g~~~~~ 197 (204)
.. .++.+.+++.|.....
T Consensus 149 ~~~~~~~~~~~~v~~Ll~~ga~~~~ 173 (201)
T 3hra_A 149 GLREGNQLYQDIVKLLMENGADQSI 173 (201)
T ss_dssp HSSCCSHHHHHHHHHHHHTTCCTTC
T ss_pred HhccchhhHHHHHHHHHHCCCCCCc
Confidence 44 3577888888765543
No 66
>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*
Probab=99.96 E-value=1.2e-28 Score=183.30 Aligned_cols=164 Identities=16% Similarity=0.113 Sum_probs=131.5
Q ss_pred HHHHHHHHhhhccccc-------------cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhccccc----------
Q 037875 4 KVIEVCRKISDHALHV-------------LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNK---------- 60 (204)
Q Consensus 4 ~~~~~~~~l~~~~~~~-------------~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~---------- 60 (204)
...+++++|+++|.+. .+..|.||||+|+..|+.+++++|++.|++ ++..+.
T Consensus 68 g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~~~~~~~~~~ 142 (273)
T 2pnn_A 68 GQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGAD-----VQAAANGDFFKKTKGR 142 (273)
T ss_dssp TBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCBCSGGGSSCSSS
T ss_pred CChHHHHHHHHhhccccchhHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----cCcccccccccccccc
Confidence 3467899999988542 345899999999999999999999998776 666665
Q ss_pred ----CCCcHHHHHHhcCCCHHHHHHHHh---hCCCccccccCCCCcHHHHHHHcCC---------HHHHHHHHhcccCCC
Q 037875 61 ----AGNTVLHATATSSRALPVADKLLR---KAPGLLGMRNNNGETALFRSARYGK---------ADIFNFLAGKIADYD 124 (204)
Q Consensus 61 ----~g~~~l~~a~~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~L~~~~~~~~ 124 (204)
.|.||||+|+..++ .+++++|++ .++ +++.++..|.||||+|+..|+ .+++++|+++|++++
T Consensus 143 ~~~~~g~tpL~~A~~~g~-~~~v~~Ll~~~~~ga-d~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n 220 (273)
T 2pnn_A 143 PGFYFGELPLSLAACTNQ-LAIVKFLLQNSWQPA-DISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLH 220 (273)
T ss_dssp CCCCSCBSHHHHHHHTTC-HHHHHHHHHCSSCCC-CTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHC
T ss_pred ccccCCCCHHHHHHHcCC-HHHHHHHHhcccCCC-CceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcc
Confidence 79999999999999 999999999 787 899999999999999999998 789999999999987
Q ss_pred CCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch-hhcccCCCCCCHh
Q 037875 125 QPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY-LIGEKDMDGMTAL 175 (204)
Q Consensus 125 ~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~-~~~~~~~~g~t~l 175 (204)
......+.++..|+||||+|+..|+.+++++|++ .|+ |+......+.+|-
T Consensus 221 ~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~-~ga~dp~~~~~~~~~~~ 271 (273)
T 2pnn_A 221 PTLKLEEITNRKGLTPLALAASSGKIGVLAYILQ-REIHEPECRHAAAHHHH 271 (273)
T ss_dssp TTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHH-HHTC-------------
T ss_pred cccccccccCCCCCCHHHHHHHhChHHHHHHHHH-CCCCCchhhhhhhhhcc
Confidence 5322234468999999999999999999999999 588 8888877777664
No 67
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.96 E-value=1.2e-28 Score=164.98 Aligned_cols=131 Identities=18% Similarity=0.085 Sum_probs=121.5
Q ss_pred ccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCC
Q 037875 17 LHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNN 96 (204)
Q Consensus 17 ~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~ 96 (204)
++..+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+. ++ .+++++|++.++ +++.++..
T Consensus 5 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~-~~-~~~v~~Ll~~g~-~~~~~~~~ 76 (136)
T 1d9s_A 5 IHMLGGSSDAGLATAAARGQVETVRQLLEAGAD-----PNALNRFGRRPIQVMMM-GS-AQVAELLLLHGA-EPNCADPA 76 (136)
T ss_dssp CSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCTTTTTSTT-SC-HHHHHHHHHHTC-CSSCCBTT
T ss_pred ccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCC-----cCCcCCCCCCHHHHHHc-CC-HHHHHHHHHCCC-CCCCcCCC
Confidence 456688899999999999999999999997766 88899999999999999 88 999999999998 89999999
Q ss_pred -CCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchh
Q 037875 97 -GETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYL 163 (204)
Q Consensus 97 -~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~ 163 (204)
|.||||+|+..|+.+++++|+++|++++. ++..|.||||+|+..++.+++++|++ .|+|
T Consensus 77 ~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~d~~g~tpl~~A~~~~~~~~~~~Ll~-~Gad 136 (136)
T 1d9s_A 77 TLTRPVHDAAREGFLDTLVVLHRAGARLDV-------CDAWGRLPVDLAEEQGHRDIARYLHA-ATGD 136 (136)
T ss_dssp TTBCHHHHHHHHTCHHHHHHHHHTCCCCCC-------CSSSSSCHHHHHHHHTCHHHHHHHHH-HHCC
T ss_pred CCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-------cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 99999999999999999999999998876 58899999999999999999999998 5775
No 68
>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A
Probab=99.96 E-value=9.1e-28 Score=165.94 Aligned_cols=147 Identities=13% Similarity=0.015 Sum_probs=134.0
Q ss_pred HHHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
-++++++|++.+.++ .+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|
T Consensus 15 ~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~L 88 (167)
T 3v31_A 15 EMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-----PQLLGKGRESALSLACSKGY-TDIVKML 88 (167)
T ss_dssp CHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHHTC-HHHHHHH
T ss_pred CHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCC-----CCCcCCCCCcHHHHHHHcCC-HHHHHHH
Confidence 368899999998765 567899999999999999999999997766 78889999999999999999 9999999
Q ss_pred HhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhch
Q 037875 83 LRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKY 162 (204)
Q Consensus 83 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~ 162 (204)
++.++ +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||+++|+..|+.+++++|++ .+.
T Consensus 89 l~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~t~l~~A~~~~~~~~~~~L~~-~~~ 159 (167)
T 3v31_A 89 LDCGV-DVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTI-------ETDSGYNSMDLAVALGYRSVQQVIES-HLL 159 (167)
T ss_dssp HHHTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHHHHH-HHH
T ss_pred HHCCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCcHHHHHHHHH-HHH
Confidence 99998 8999999999999999999999999999999998876 58899999999999999999999999 476
Q ss_pred hhcc
Q 037875 163 LIGE 166 (204)
Q Consensus 163 ~~~~ 166 (204)
++..
T Consensus 160 ~~~~ 163 (167)
T 3v31_A 160 KLLQ 163 (167)
T ss_dssp HHCS
T ss_pred HHHH
Confidence 6544
No 69
>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1
Probab=99.96 E-value=6.1e-28 Score=164.59 Aligned_cols=138 Identities=17% Similarity=0.142 Sum_probs=127.6
Q ss_pred HHHHHHHhhhcccccc-ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 5 VIEVCRKISDHALHVL-TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~-~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
-.+++++|+++|.+.. +..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|+
T Consensus 14 ~~~~v~~Ll~~g~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll 87 (153)
T 1awc_B 14 QDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS-----RDARTKVDRTPLHMAASEGH-ANIVEVLL 87 (153)
T ss_dssp CHHHHHHHHHHTCCCCCCTTCCCHHHHHHHHTCHHHHHHHHTTTCC-----TTCCCTTCCCHHHHHHHHTC-HHHHHHHH
T ss_pred CHHHHHHHHHcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCCCCCHHHHHHHcCh-HHHHHHHH
Confidence 4688999999998754 66799999999999999999999997766 78899999999999999999 99999999
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHH
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEI 156 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 156 (204)
+.++ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..|.||+|+|+..|+.+++++|
T Consensus 88 ~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~t~l~~A~~~~~~~i~~~L 152 (153)
T 1awc_B 88 KHGA-DVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHT-------QSKFCKTAFDISIDNGNEDLAEIL 152 (153)
T ss_dssp TTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred HcCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-------cCCCCCCHHHHHHHcCCHHHHHHh
Confidence 9998 8999999999999999999999999999999998876 588999999999999999999765
No 70
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.4e-29 Score=183.81 Aligned_cols=154 Identities=17% Similarity=0.124 Sum_probs=126.6
Q ss_pred HHHhhhcccccc-----ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 9 CRKISDHALHVL-----TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 9 ~~~l~~~~~~~~-----~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
++.|+++|.+++ +..+.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|+
T Consensus 1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~d~~g~tpLh~A~~~g~-~~~v~~Ll 74 (229)
T 2vge_A 1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMND-----PSQPNEEGITALHNAICGAN-YSIVDFLI 74 (229)
T ss_dssp ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHH
T ss_pred CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHHH
Confidence 356777776653 34578899999999999999999997766 88899999999999999999 99999999
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHH--HHhCCHHHHHHHHHHhc
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMA--VISQHFELALEIAKEYK 161 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a--~~~~~~~~~~~Ll~~~g 161 (204)
+.++ +++.++..|.||||+|+..|+.+++++|++.|++++.. .+..|+||||+| +..|+.+++++|++ .|
T Consensus 75 ~~ga-~~n~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~------~~~~g~tpL~~A~a~~~~~~~~v~~Ll~-~g 146 (229)
T 2vge_A 75 TAGA-NVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFAT------TLSDGATAFEKCDPYREGYADCATYLAD-VE 146 (229)
T ss_dssp HTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCC------CSSTTCCTGGGCCTTSTTHHHHHHHHHH-HH
T ss_pred HCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc------cCCCCCCHHHHHHHHhcChHHHHHHHHH-cC
Confidence 9998 89999999999999999999999999999999998873 136899999999 99999999999999 57
Q ss_pred hhhcccCCCCCCHhH
Q 037875 162 YLIGEKDMDGMTALQ 176 (204)
Q Consensus 162 ~~~~~~~~~g~t~l~ 176 (204)
++++.++..|.||++
T Consensus 147 a~~~~~~~~~~~~l~ 161 (229)
T 2vge_A 147 QSMGLMNSGAVYALW 161 (229)
T ss_dssp HHTTTSGGGEEEESS
T ss_pred CCcccccCCchHHHH
Confidence 777655444444444
No 71
>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B
Probab=99.96 E-value=1.1e-28 Score=180.25 Aligned_cols=160 Identities=13% Similarity=0.075 Sum_probs=115.1
Q ss_pred cCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHH
Q 037875 22 VHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETAL 101 (204)
Q Consensus 22 ~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l 101 (204)
..|.||||.|+..++.+.++.|++.|++ ++. +..|.||||.|+..|+ .+++++|++.++ +++..+..|.|||
T Consensus 3 ~~g~t~L~~a~~~~~~~~~~~ll~~g~~-----~~~-~~~~~t~L~~A~~~g~-~~~v~~Ll~~g~-~~~~~d~~g~t~L 74 (239)
T 1ycs_B 3 ITGQVSLPPGKRTNLRKTGSERIAHGMR-----VKF-NPLPLALLLDSSLEGE-FDLVQRIIYEVD-DPSLPNDEGITAL 74 (239)
T ss_dssp ----------------------------------------CHHHHHHHHHHTC-HHHHHHHTSTTS-SCCCCCTTSCCHH
T ss_pred ccccccCchhhhhhhHHHHHHHhccCCC-----ccc-CchhhHHHHHHHHcCC-HHHHHHHHHcCC-CCCCcCCCCCCHH
Confidence 4689999999999999999999998876 443 3678999999999999 999999999998 8999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCC-CHhHHh--
Q 037875 102 FRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGM-TALQLL-- 178 (204)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~-t~l~~a-- 178 (204)
|+|+..|+.+++++|+++|++++. ++..|+||||+|+..|+.+++++|++ .|++++.++..|. ||+++|
T Consensus 75 ~~A~~~g~~~~v~~Ll~~ga~~~~-------~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~~~~t~l~~a~~ 146 (239)
T 1ycs_B 75 HNAVCAGHTEIVKFLVQFGVNVNA-------ADSDGWTPLHCAASCNNVQVCKFLVE-SGAAVFAMTYSDMQTAADKCEE 146 (239)
T ss_dssp HHHHHHTCHHHHHHHHHHTCCTTC-------CCTTCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCSSSCCCHHHHCCS
T ss_pred HHHHHcCCHHHHHHHHHcCCCCCc-------cCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCcceecCCCCcchHHHHHH
Confidence 999999999999999999999887 58899999999999999999999999 6999999998887 999999
Q ss_pred ccC--Ccchhhhhhccchhhh
Q 037875 179 SCK--PEAFKLKQERGFFKKL 197 (204)
Q Consensus 179 ~~~--~~~~~~~~~~g~~~~~ 197 (204)
+.+ .++.+.++..|.....
T Consensus 147 ~~~g~~~~~~~Ll~~~a~~~~ 167 (239)
T 1ycs_B 147 MEEGYTQCSQFLYGVQEKMGI 167 (239)
T ss_dssp SSTTCCCHHHHHHHHHHHTTT
T ss_pred hhhccHHHHHHHHHhhhcccc
Confidence 433 6788888887776544
No 72
>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}
Probab=99.96 E-value=1.3e-27 Score=168.87 Aligned_cols=140 Identities=21% Similarity=0.165 Sum_probs=129.7
Q ss_pred HHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHH
Q 037875 6 IEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLL 83 (204)
Q Consensus 6 ~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll 83 (204)
.+++++|+++|.++ .+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|+
T Consensus 48 ~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll 121 (192)
T 2rfm_A 48 ENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN-----VNTKDFSGKTPLMWSIIFGY-SEMSYFLL 121 (192)
T ss_dssp GGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHHH
T ss_pred HHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHHcCC-HHHHHHHH
Confidence 56788999998765 467799999999999999999999997766 88899999999999999999 99999999
Q ss_pred hhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHH
Q 037875 84 RKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKE 159 (204)
Q Consensus 84 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 159 (204)
+.++ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..|.||+++|+..|+.+++++|++.
T Consensus 122 ~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~t~l~~A~~~~~~~~v~~Ll~~ 189 (192)
T 2rfm_A 122 EHGA-NVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA-------RDLTGLTAEASARIFGRQEVIKIFTEV 189 (192)
T ss_dssp HTTC-CSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTC-------BCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred HCCC-CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC-------cCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence 9998 8999999999999999999999999999999998876 689999999999999999999999884
No 73
>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A
Probab=99.95 E-value=5.5e-28 Score=168.98 Aligned_cols=152 Identities=16% Similarity=0.082 Sum_probs=138.0
Q ss_pred HHHHHHHhhhcc-c--cccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 5 VIEVCRKISDHA-L--HVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 5 ~~~~~~~l~~~~-~--~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
-++++++|++.+ . +..+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++
T Consensus 17 ~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~ 90 (179)
T 3f6q_A 17 NAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR-----INVMNRGDDTPLHLAASHGH-RDIVQK 90 (179)
T ss_dssp CHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTC-HHHHHH
T ss_pred CHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCC-HHHHHH
Confidence 467888899884 3 45678899999999999999999999997766 88899999999999999999 999999
Q ss_pred HHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc
Q 037875 82 LLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK 161 (204)
Q Consensus 82 Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g 161 (204)
|++.++ +++..+..|.||||+|+..|+.+++++|+++|++++. ++..|.||+++|+..++.+++++|++ .|
T Consensus 91 Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~tpl~~A~~~~~~~~~~~L~~-~g 161 (179)
T 3f6q_A 91 LLQYKA-DINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSI-------CNKYGEMPVDKAKAPLRELLRERAEK-MG 161 (179)
T ss_dssp HHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSB-------CCTTSCCGGGGSCHHHHHHHHHHHHH-TT
T ss_pred HHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcch-------hccCCCCcHHHHHHHHHHHHHHHHHH-hh
Confidence 999998 8999999999999999999999999999999998776 68999999999999999999999988 69
Q ss_pred hhhcccCCCC
Q 037875 162 YLIGEKDMDG 171 (204)
Q Consensus 162 ~~~~~~~~~g 171 (204)
++++..+..+
T Consensus 162 ~~~~~~~~~~ 171 (179)
T 3f6q_A 162 QNLNRIPYKD 171 (179)
T ss_dssp CCCSCBCCCC
T ss_pred cCcccCCccc
Confidence 9999876554
No 74
>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*
Probab=99.95 E-value=3.1e-27 Score=180.55 Aligned_cols=173 Identities=16% Similarity=0.111 Sum_probs=147.5
Q ss_pred HHHHHHHhhhcccccc------------ccCCchHHHHHHhcCChHHHHHHHhh-CchhhhhhhcccccCCCcHHHHHHh
Q 037875 5 VIEVCRKISDHALHVL------------TVHDDTVLHMATYFKRDDLALKLLDE-IPELYIHKMTRQNKAGNTVLHATAT 71 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~------------~~~~~~~L~~A~~~~~~~~v~~Ll~~-g~~~~~~~~~~~~~~g~~~l~~a~~ 71 (204)
..+++++++++|.+++ +..|.||||+|+..|+.+++++|++. |++ ++.++..|.|+++.++.
T Consensus 137 ~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad-----~n~~d~~g~t~l~~~~~ 211 (337)
T 4g8k_A 137 KVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGAD-----VNACDNMGRNALIHALL 211 (337)
T ss_dssp CHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCC-----TTCCCTTSCCHHHHHHH
T ss_pred cHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCC-----cCccCCCCCcHHHHHHH
Confidence 4678899999987653 34589999999999999999999964 555 88999999999998776
Q ss_pred cCCC---HHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhc-ccCCCCCCCCccccCCCCccHHHHHHHh
Q 037875 72 SSRA---LPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGK-IADYDQPSKQPFLQRNDQSTVLHMAVIS 147 (204)
Q Consensus 72 ~~~~---~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 147 (204)
.+.. ..++++|++.|+ +++.++..|.||||+|+..|+.++++.|++. |++++. +|..|+||||+|+..
T Consensus 212 ~~~~~~~~~i~~lLl~~ga-d~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~-------~d~~G~TpL~~A~~~ 283 (337)
T 4g8k_A 212 SSDDSDVEAITHLLLDHGA-DVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIND-------TDSDGKTALLLAVEL 283 (337)
T ss_dssp HSCTTTHHHHHHHHHHTTC-CTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTC-------BCTTSCBHHHHHHHT
T ss_pred HcCcccHHHHHHHHHHCCC-CCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccC-------cCCCCCCHHHHHHHc
Confidence 6541 357899999998 8999999999999999999999999999985 677665 689999999999999
Q ss_pred CCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccchhh
Q 037875 148 QHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKK 196 (204)
Q Consensus 148 ~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~ 196 (204)
|+.+++++||+ .|++++.+ +||++|+.+ .++.+++++.|+...
T Consensus 284 g~~~iv~~Ll~-~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d 328 (337)
T 4g8k_A 284 KLKKIAELLCK-RGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKED 328 (337)
T ss_dssp TCHHHHHHHHT-TSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred CCHHHHHHHHH-CCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence 99999999999 69988754 599999854 578899999997654
No 75
>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*
Probab=99.95 E-value=2e-27 Score=175.31 Aligned_cols=155 Identities=17% Similarity=0.152 Sum_probs=133.0
Q ss_pred HHHHHHHhhhccccc-------------cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccc------------
Q 037875 5 VIEVCRKISDHALHV-------------LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQN------------ 59 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~-------------~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~------------ 59 (204)
..+++++|++.|.+. .+..|.||||+|+..|+.+++++|++.|++ ++..+
T Consensus 61 ~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~-----~~~~~~~~~~~~~~~~~ 135 (260)
T 3jxi_A 61 RNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD-----VHAQARGRFFQPKDEGG 135 (260)
T ss_dssp BCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCEECCCSSSCCCC
T ss_pred CHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCC-----cCccccccccCcccccc
Confidence 357888999987432 234799999999999999999999997776 67776
Q ss_pred --cCCCcHHHHHHhcCCCHHHHHHHHh---hCCCccccccCCCCcHHHHHHHcCC---------HHHHHHHHhcccCCCC
Q 037875 60 --KAGNTVLHATATSSRALPVADKLLR---KAPGLLGMRNNNGETALFRSARYGK---------ADIFNFLAGKIADYDQ 125 (204)
Q Consensus 60 --~~g~~~l~~a~~~~~~~~~~~~Ll~---~~~~~~~~~~~~~~t~l~~a~~~~~---------~~~~~~L~~~~~~~~~ 125 (204)
..|.||||+|+..++ .+++++|++ .++ +++.++..|.||||+|+..++ .+++++|+++|++++.
T Consensus 136 ~~~~g~tpL~~A~~~g~-~~~v~~Ll~~~~~ga-~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~ 213 (260)
T 3jxi_A 136 YFYFGELPLSLAACTNQ-PHIVHYLTENGHKQA-DLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFP 213 (260)
T ss_dssp SCCSCSSHHHHHHHTTC-HHHHHHHHHCSSCCC-CTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCT
T ss_pred cccCCCCHHHHHHHcCC-HHHHHHHHhccccCC-CCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCccccc
Confidence 689999999999999 999999999 787 899999999999999999888 6899999999999864
Q ss_pred CCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhccc
Q 037875 126 PSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEK 167 (204)
Q Consensus 126 ~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~ 167 (204)
.....+.++..|+||||+|+..|+.+++++|+++ |.+....
T Consensus 214 ~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~-g~~~~~~ 254 (260)
T 3jxi_A 214 DTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRR-EIADAAA 254 (260)
T ss_dssp TCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHH-HHHHHC-
T ss_pred ccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHh-CCCcccc
Confidence 3333345799999999999999999999999995 7776654
No 76
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.95 E-value=9e-27 Score=153.29 Aligned_cols=126 Identities=25% Similarity=0.342 Sum_probs=117.6
Q ss_pred CCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHH
Q 037875 23 HDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALF 102 (204)
Q Consensus 23 ~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~ 102 (204)
+|.||||+|+..|+.+++++|++.|.+ ++..+..|.||||+|+..++ .+++++|++.+. +++.++..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~-~~~~~~~~g~t~l~ 73 (126)
T 1n0r_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHLAARNGH-LEVVKLLLEAGA-DVNAKDKNGRTPLH 73 (126)
T ss_dssp CCCCHHHHHHHHTCHHHHHHHHHHTCC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCTTSCCHHH
T ss_pred CCccHHHHHHHcCcHHHHHHHHHcCCC-----CCCcCCCCCcHHHHHHHcCc-HHHHHHHHHcCC-CCcccCCCCCcHHH
Confidence 489999999999999999999997765 78889999999999999999 999999999997 88899999999999
Q ss_pred HHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchh
Q 037875 103 RSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYL 163 (204)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~ 163 (204)
+|+..++.+++++|+++|++++. ++..|.||+++|+..++.+++++|++ .|+|
T Consensus 74 ~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~l~~A~~~~~~~~~~~Ll~-~Gad 126 (126)
T 1n0r_A 74 LAARNGHLEVVKLLLEAGADVNA-------KDKNGRTPLHLAARNGHLEVVKLLLE-AGAY 126 (126)
T ss_dssp HHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-HTCC
T ss_pred HHHHcChHHHHHHHHHcCCCCcc-------cCCCCCCHHHHHHHcCcHHHHHHHHH-cCCC
Confidence 99999999999999999998776 58899999999999999999999998 5764
No 77
>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B
Probab=99.95 E-value=1.8e-26 Score=157.67 Aligned_cols=138 Identities=18% Similarity=0.276 Sum_probs=125.2
Q ss_pred HHHHHHHhhhc---cccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 5 VIEVCRKISDH---ALHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 5 ~~~~~~~l~~~---~~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
-+++++.|++. ..+..+..|.||||+ +..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++
T Consensus 14 ~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~ 86 (156)
T 1bd8_A 14 DVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGAS-----PNVQDTSGTSPVHDAARTGF-LDTLKV 86 (156)
T ss_dssp CHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHH
T ss_pred CHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCC-----CCCcCCCCCCHHHHHHHcCc-HHHHHH
Confidence 46788888877 234567889999999 999999999999997766 88899999999999999999 999999
Q ss_pred HHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHH
Q 037875 82 LLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAK 158 (204)
Q Consensus 82 Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 158 (204)
|++.|+ +++.++..|.||||+|+..|+.+++++|++. ++++. ++..|.||||+|+..|+.+++++|++
T Consensus 87 Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~-------~~~~g~t~l~~A~~~~~~~~v~~Ll~ 154 (156)
T 1bd8_A 87 LVEHGA-DVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHR-------RDARGLTPLELALQRGAQDLVDILQG 154 (156)
T ss_dssp HHHTTC-CSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTC-------CCTTSCCHHHHHHHSCCHHHHHHHHT
T ss_pred HHHcCC-CCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCC-------cCCCCCCHHHHHHHcCcHHHHHHHHh
Confidence 999997 8999999999999999999999999999998 77766 68899999999999999999999886
No 78
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.95 E-value=1e-26 Score=155.49 Aligned_cols=124 Identities=20% Similarity=0.170 Sum_probs=115.7
Q ss_pred ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcH
Q 037875 21 TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETA 100 (204)
Q Consensus 21 ~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~ 100 (204)
...+.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|++.++ +++..+..|.||
T Consensus 11 ~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~d~~g~t~ 83 (136)
T 2jab_A 11 GSDLGKKLLEAARAGQDDEVRILMANGAD-----VNAKDEYGLTPLYLATAHGH-LEIVEVLLKNGA-DVNAVDAIGFTP 83 (136)
T ss_dssp -CHHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCTTCCCH
T ss_pred cccccHHHHHHHHhCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCcCCCCCCCH
Confidence 45689999999999999999999997766 88899999999999999999 999999999998 899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHH
Q 037875 101 LFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAK 158 (204)
Q Consensus 101 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 158 (204)
||+|+..|+.+++++|+++|++++. ++..|.||||+|+..|+.+++++|++
T Consensus 84 L~~A~~~~~~~~v~~Ll~~g~~~~~-------~~~~g~tpl~~A~~~~~~~~~~~Ll~ 134 (136)
T 2jab_A 84 LHLAAFIGHLEIAEVLLKHGADVNA-------QDKFGKTAFDISIGNGNEDLAEILQK 134 (136)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCcC-------cCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence 9999999999999999999998876 58899999999999999999999987
No 79
>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*
Probab=99.95 E-value=5.8e-27 Score=161.57 Aligned_cols=142 Identities=20% Similarity=0.236 Sum_probs=125.2
Q ss_pred HHHHHHHhhhcc-ccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHH
Q 037875 5 VIEVCRKISDHA-LHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADK 81 (204)
Q Consensus 5 ~~~~~~~l~~~~-~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~ 81 (204)
-+++++.|++.+ .+. .+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++
T Consensus 20 ~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~ 93 (165)
T 3twr_A 20 DVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD-----VHAKDKGGLVPLHNACSYGH-YEVAEL 93 (165)
T ss_dssp CHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHH
T ss_pred CHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCC-----CCccCCCCCCHHHHHHHcCc-HHHHHH
Confidence 367888888854 333 456688999999999999999999997766 88999999999999999999 999999
Q ss_pred HHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc
Q 037875 82 LLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK 161 (204)
Q Consensus 82 Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g 161 (204)
|++.++ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..|.||+|+|+. ++.+++++|+. .|
T Consensus 94 Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~t~l~~a~~-~~~~i~~~L~~-~g 163 (165)
T 3twr_A 94 LVKHGA-VVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTK-------KNRDGNTPLDLVKD-GDTDIQDLLRG-DA 163 (165)
T ss_dssp HHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCTGGGSCT-TCHHHHHHHHT-C-
T ss_pred HHhCCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcc-------cCCCCCChhHhHhc-CChHHHHHHhh-cc
Confidence 999998 8999999999999999999999999999999998876 68999999999776 89999998887 45
Q ss_pred h
Q 037875 162 Y 162 (204)
Q Consensus 162 ~ 162 (204)
+
T Consensus 164 A 164 (165)
T 3twr_A 164 A 164 (165)
T ss_dssp -
T ss_pred c
Confidence 4
No 80
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.1e-27 Score=168.52 Aligned_cols=151 Identities=17% Similarity=0.135 Sum_probs=123.7
Q ss_pred CchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccc-cCCCcHHHHHHhcCCC---HHHHHHHHhhCCCccccccCCCCc
Q 037875 24 DDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQN-KAGNTVLHATATSSRA---LPVADKLLRKAPGLLGMRNNNGET 99 (204)
Q Consensus 24 ~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~-~~g~~~l~~a~~~~~~---~~~~~~Ll~~~~~~~~~~~~~~~t 99 (204)
+.++|+.|+..|+.+.++.++..+ ++..+ ..|.||||+|+..++. .+++++|++.|+ +++.++..|+|
T Consensus 6 ~~~~l~~Aa~~g~~~~~~~l~~~~-------~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Ga-dvn~~d~~g~T 77 (186)
T 3t8k_A 6 EYRTVSAAAMLGTYEDFLELFEKG-------YEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGA-DIKSRTKEGTT 77 (186)
T ss_dssp HCSSHHHHHHHSCHHHHHHHHHHS-------SSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTC-CSSCCCTTCCC
T ss_pred cccHHHHHHHcCCHHHHHHHHhcC-------cccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCC-CCCCCCCCCCc
Confidence 567899999999999999998865 33444 6799999999998872 248999999998 89999999999
Q ss_pred HHHHHHHcCC------HHHHHHHHhcccCCCCCCCCccccCCCCc-cHHHHHHHhC-----CHHHHHHHHHHhchhhccc
Q 037875 100 ALFRSARYGK------ADIFNFLAGKIADYDQPSKQPFLQRNDQS-TVLHMAVISQ-----HFELALEIAKEYKYLIGEK 167 (204)
Q Consensus 100 ~l~~a~~~~~------~~~~~~L~~~~~~~~~~~~~~~~~~~~g~-t~l~~a~~~~-----~~~~~~~Ll~~~g~~~~~~ 167 (204)
|||+|+..++ .+++++|+++|++++. +|..|+ ||||+|+..+ ..++++.|+...|++++.+
T Consensus 78 pLh~a~~~~~~~~~~~~~iv~~Ll~~Gadin~-------~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~ 150 (186)
T 3t8k_A 78 LFFPLFQGGGNDITGTTELCKIFLEKGADITA-------LYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIK 150 (186)
T ss_dssp THHHHHHHCTTCHHHHHHHHHHHHHTTCCSSS-------CBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCC
T ss_pred HHHHHHHcCCcchhhHHHHHHHHHHCCCCCCc-------cCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCccc
Confidence 9999999887 4679999999999887 588898 9999999844 3568888877359999999
Q ss_pred CCCCCCHhHHhccCC--cchhhhh
Q 037875 168 DMDGMTALQLLSCKP--EAFKLKQ 189 (204)
Q Consensus 168 ~~~g~t~l~~a~~~~--~~~~~~~ 189 (204)
|..|.||||+|+..+ ++.+.+.
T Consensus 151 d~~G~TpL~~A~~~~~~~~v~~L~ 174 (186)
T 3t8k_A 151 DKWGLTALEFVKRCQKPIALKMME 174 (186)
T ss_dssp CTTSCCHHHHHHTTTCHHHHHHHH
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHH
Confidence 999999999998654 4444443
No 81
>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1
Probab=99.94 E-value=6.5e-27 Score=156.47 Aligned_cols=129 Identities=12% Similarity=0.055 Sum_probs=118.9
Q ss_pred hhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCcccc
Q 037875 54 KMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQ 133 (204)
Q Consensus 54 ~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~ 133 (204)
.++..+..|.||||+|+..++ .+++++|++.+. +++.++..|.||||+|+. ++.+++++|+++|++++. +
T Consensus 4 ~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~-------~ 73 (136)
T 1d9s_A 4 GIHMLGGSSDAGLATAAARGQ-VETVRQLLEAGA-DPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNC-------A 73 (136)
T ss_dssp CCSCCCCCCSCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTCCTTTTTSTT-SCHHHHHHHHHHTCCSSC-------C
T ss_pred CccCCCCCCccHHHHHHHcCC-HHHHHHHHHcCC-CcCCcCCCCCCHHHHHHc-CCHHHHHHHHHCCCCCCC-------c
Confidence 478899999999999999999 999999999997 899999999999999999 999999999999998877 5
Q ss_pred CCC-CccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc--cCCcchhhhhhccc
Q 037875 134 RND-QSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS--CKPEAFKLKQERGF 193 (204)
Q Consensus 134 ~~~-g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~--~~~~~~~~~~~~g~ 193 (204)
+.. |+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+ .+.++.+.+++.|+
T Consensus 74 ~~~~g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Ga 135 (136)
T 1d9s_A 74 DPATLTRPVHDAAREGFLDTLVVLHR-AGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATG 135 (136)
T ss_dssp BTTTTBCHHHHHHHHTCHHHHHHHHH-TCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHC
T ss_pred CCCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence 788 9999999999999999999999 69999999999999999998 45577788877765
No 82
>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1
Probab=99.94 E-value=6.7e-27 Score=178.19 Aligned_cols=180 Identities=14% Similarity=0.116 Sum_probs=144.3
Q ss_pred HHHHHHHHhhhcccccccc----------------C---CchHHHHHHhcCChHHHHHHHhhCchhhhhhhcc-cccCCC
Q 037875 4 KVIEVCRKISDHALHVLTV----------------H---DDTVLHMATYFKRDDLALKLLDEIPELYIHKMTR-QNKAGN 63 (204)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~----------------~---~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~-~~~~g~ 63 (204)
..+++++.|+++|++.... . ..+.+|+|+..+..++++.|++.|.+ ++. .+..|.
T Consensus 58 g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~d-----vn~~~d~~g~ 132 (327)
T 1sw6_A 58 EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN-----LNIPVDEHGN 132 (327)
T ss_dssp HHHHHHHHHHHHHHC-------------------------------CHHHHHHHHHHHCTTSCCC-----SCSCCSTTCC
T ss_pred chhHHHHHHHHhccCCccccchHhhhcccccccccccCCccchhHHHHHhhHHHHHHHHHhcCCC-----cccccCCCCC
Confidence 3578999999999775431 1 12234777777888899999996666 888 899999
Q ss_pred cHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCC---HHHHHHHHhcc-cCCCCCCCCccccCCCCcc
Q 037875 64 TVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGK---ADIFNFLAGKI-ADYDQPSKQPFLQRNDQST 139 (204)
Q Consensus 64 ~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~---~~~~~~L~~~~-~~~~~~~~~~~~~~~~g~t 139 (204)
||||+|+..|+ .+++++|+++|+ +++.++..|.||||+|+..|+ .++++.|++.+ .+++ .++..|+|
T Consensus 133 TpLh~Aa~~g~-~~~v~~Ll~~Ga-d~n~~d~~g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~-------~~d~~g~t 203 (327)
T 1sw6_A 133 TPLHWLTSIAN-LELVKHLVKHGS-NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI-------LEDSMNRT 203 (327)
T ss_dssp CHHHHHHHTTC-HHHHHHHHHTTC-CTTBCCTTCCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGG-------EECTTCCC
T ss_pred cHHHHHHHcCC-HHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHhcccccHHHHHHHHHhhhcccc-------CCCCCCCC
Confidence 99999999999 999999999998 899999999999999999998 67778888876 4444 47899999
Q ss_pred HHHHHHH----hCCHHHHHHHHHHhch---------------------------------------------hhcccCCC
Q 037875 140 VLHMAVI----SQHFELALEIAKEYKY---------------------------------------------LIGEKDMD 170 (204)
Q Consensus 140 ~l~~a~~----~~~~~~~~~Ll~~~g~---------------------------------------------~~~~~~~~ 170 (204)
|||+|+. .|+.++++.|++. +. +++.+|..
T Consensus 204 pLh~A~~~~~~~g~~~~v~~Ll~~-~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~~~~Ll~~~~n~~d~~ 282 (327)
T 1sw6_A 204 ILHHIIITSGMTGCSAAAKYYLDI-LMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSN 282 (327)
T ss_dssp HHHHHHHHHTSTTCHHHHHHHHHH-HHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHHTTTCCCTT
T ss_pred HHHHHHHHccccccHHHHHHHHHH-HHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHHHHHHHHhCCCCCCCC
Confidence 9999999 8999999999884 43 58888999
Q ss_pred CCCHhHHhcc--CCcchhhhhhccchhhhh
Q 037875 171 GMTALQLLSC--KPEAFKLKQERGFFKKLL 198 (204)
Q Consensus 171 g~t~l~~a~~--~~~~~~~~~~~g~~~~~~ 198 (204)
|.||||+|+. +.++.+.+++.|+.....
T Consensus 283 G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~ 312 (327)
T 1sw6_A 283 GDTCLNIAARLGNISIVDALLDYGADPFIA 312 (327)
T ss_dssp SCCHHHHHHHHCCHHHHHHHHHTTCCTTCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHHcCCCCccc
Confidence 9999999984 568888888888775543
No 83
>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}
Probab=99.94 E-value=1.3e-26 Score=162.97 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=127.4
Q ss_pred HHHHHhhhccccccc-cCCchHHHHHHhcCCh----HHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCC-----H
Q 037875 7 EVCRKISDHALHVLT-VHDDTVLHMATYFKRD----DLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRA-----L 76 (204)
Q Consensus 7 ~~~~~l~~~~~~~~~-~~~~~~L~~A~~~~~~----~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~-----~ 76 (204)
+.+..++..+.+..+ ..|.||||+|+..++. +++++|++.|++ ++.++..|.||||+|+..++. .
T Consensus 20 ~~~~~l~~~~~~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gad-----vn~~d~~g~TpLh~a~~~~~~~~~~~~ 94 (186)
T 3t8k_A 20 EDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD-----IKSRTKEGTTLFFPLFQGGGNDITGTT 94 (186)
T ss_dssp HHHHHHHHHSSSCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCC-----SSCCCTTCCCTHHHHHHHCTTCHHHHH
T ss_pred HHHHHHHhcCcccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHHcCCcchhhHH
Confidence 456677777777665 7799999999999975 489999997776 899999999999999998862 4
Q ss_pred HHHHHHHhhCCCccccccCCCC-cHHHHHHHcCC-----HHHHHHHHh-cccCCCCCCCCccccCCCCccHHHHHHHhCC
Q 037875 77 PVADKLLRKAPGLLGMRNNNGE-TALFRSARYGK-----ADIFNFLAG-KIADYDQPSKQPFLQRNDQSTVLHMAVISQH 149 (204)
Q Consensus 77 ~~~~~Ll~~~~~~~~~~~~~~~-t~l~~a~~~~~-----~~~~~~L~~-~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~ 149 (204)
+++++|+++|+ +++.++..|. ||||+|+..+. .+++++|++ .|++++. +|..|.||||+|+..|+
T Consensus 95 ~iv~~Ll~~Ga-din~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~-------~d~~G~TpL~~A~~~~~ 166 (186)
T 3t8k_A 95 ELCKIFLEKGA-DITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLI-------KDKWGLTALEFVKRCQK 166 (186)
T ss_dssp HHHHHHHHTTC-CSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTC-------CCTTSCCHHHHHHTTTC
T ss_pred HHHHHHHHCCC-CCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcc-------cCCCCCCHHHHHHHcCC
Confidence 68999999998 9999999999 99999999543 568999999 9999887 68999999999999999
Q ss_pred HHHHHHHHHHhchhhcccC
Q 037875 150 FELALEIAKEYKYLIGEKD 168 (204)
Q Consensus 150 ~~~~~~Ll~~~g~~~~~~~ 168 (204)
.++++.|+. +....+.++
T Consensus 167 ~~~v~~L~~-~~~~~~~~~ 184 (186)
T 3t8k_A 167 PIALKMMED-YIKKYNLKE 184 (186)
T ss_dssp HHHHHHHHH-HHHHHTCCC
T ss_pred HHHHHHHHH-HHHHHhccc
Confidence 999988887 566666654
No 84
>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}
Probab=99.94 E-value=1e-28 Score=179.22 Aligned_cols=160 Identities=16% Similarity=0.044 Sum_probs=138.9
Q ss_pred HHHHHHHhhhccccc--cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH
Q 037875 5 VIEVCRKISDHALHV--LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL 82 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~--~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L 82 (204)
..+++++|++.|.++ .+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|
T Consensus 33 ~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~-----~n~~d~~g~tpLh~A~~~g~-~~~v~~L 106 (229)
T 2vge_A 33 ELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGAN-----VNSPDSHGWTPLHCAASCND-TVICMAL 106 (229)
T ss_dssp CHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTC-HHHHHHH
T ss_pred CHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCC-----CCCCCCCCCCHHHHHHHcCC-HHHHHHH
Confidence 468899999998776 467899999999999999999999997766 88999999999999999999 9999999
Q ss_pred HhhCCCcccccc-CCCCcHHHHH--HHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHH
Q 037875 83 LRKAPGLLGMRN-NNGETALFRS--ARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKE 159 (204)
Q Consensus 83 l~~~~~~~~~~~-~~~~t~l~~a--~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~ 159 (204)
++.++ +++..+ ..|.||||+| +..|+.+++++|++.|++++. ++..+.|+++.++..... +.|+.
T Consensus 107 l~~ga-~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~-------~~~~~~~~l~~~~~~~~~---~~ll~- 174 (229)
T 2vge_A 107 VQHGA-AIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGL-------MNSGAVYALWDYSAEFGD---ELSFR- 174 (229)
T ss_dssp HTTTC-CTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTT-------SGGGEEEESSCBCCSSTT---BCCBC-
T ss_pred HHcCC-CcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCccc-------ccCCchHHHHHHhhcccc---ccCcc-
Confidence 99998 788775 6999999999 999999999999999999887 577888888865554433 35555
Q ss_pred hchh--hcccCCCCCCHhHHhccCC
Q 037875 160 YKYL--IGEKDMDGMTALQLLSCKP 182 (204)
Q Consensus 160 ~g~~--~~~~~~~g~t~l~~a~~~~ 182 (204)
.|++ ++.+|..|.|||++|+.++
T Consensus 175 ~ga~~~~~~~d~~G~TpL~~A~~~g 199 (229)
T 2vge_A 175 EGESVTVLRRDGPEETDWWWAALHG 199 (229)
T ss_dssp TTCEEEEEESSCTTCSSEEEEEETT
T ss_pred ccccccccccCCCcccHHHHHHHcC
Confidence 5888 7788999999999998665
No 85
>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}
Probab=99.94 E-value=9.4e-26 Score=168.01 Aligned_cols=143 Identities=20% Similarity=0.237 Sum_probs=129.8
Q ss_pred HHHHHHHhhhccc-cc--cccCCchHHHHHH-----hcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCH
Q 037875 5 VIEVCRKISDHAL-HV--LTVHDDTVLHMAT-----YFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRAL 76 (204)
Q Consensus 5 ~~~~~~~l~~~~~-~~--~~~~~~~~L~~A~-----~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~ 76 (204)
..+++++|++.|. ++ .+..|.||||+|+ ..++.+++++|++.|.. .+..+..|.||||+|+..|+ .
T Consensus 123 ~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~-----~~~~~~~g~tpLh~A~~~g~-~ 196 (276)
T 4hbd_A 123 NFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNI-----NAKASQAGQTALMLAVSHGR-V 196 (276)
T ss_dssp CHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCT-----TCCCTTTCCCHHHHHHHTTC-H
T ss_pred CHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCC-----ccccCCCCCCHHHHHHHcCC-H
Confidence 4688999999987 44 5778999999999 66889999999997755 77788899999999999999 9
Q ss_pred HHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHh-cccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHH
Q 037875 77 PVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAG-KIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALE 155 (204)
Q Consensus 77 ~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~-~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~ 155 (204)
+++++|++.|+ +++.++..|.||||+|+..|+.+++++|++ .|++++. +|..|.||||+|+..|+.+++++
T Consensus 197 ~~v~~Ll~~ga-d~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~-------~d~~g~TpL~~A~~~g~~~iv~~ 268 (276)
T 4hbd_A 197 DVVKALLACEA-DVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISL-------TDRDGSTALMVALDAGQSEIASM 268 (276)
T ss_dssp HHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTC-------CCTTSCCHHHHHHHHTCHHHHHH
T ss_pred HHHHHHHhCCC-CCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcC-------cCCCCCCHHHHHHHcCCHHHHHH
Confidence 99999999998 899999999999999999999999999999 8888876 68999999999999999999999
Q ss_pred HHHHhc
Q 037875 156 IAKEYK 161 (204)
Q Consensus 156 Ll~~~g 161 (204)
|+++.+
T Consensus 269 Ll~~~~ 274 (276)
T 4hbd_A 269 LYSRMN 274 (276)
T ss_dssp HHHHCC
T ss_pred HHhccC
Confidence 998643
No 86
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.94 E-value=1.7e-25 Score=168.44 Aligned_cols=139 Identities=18% Similarity=0.146 Sum_probs=121.2
Q ss_pred CCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcc------cccCCCcHHHHHHhc---CCCHHHHHHHHhhCCCccccc
Q 037875 23 HDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTR------QNKAGNTVLHATATS---SRALPVADKLLRKAPGLLGMR 93 (204)
Q Consensus 23 ~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~------~~~~g~~~l~~a~~~---~~~~~~~~~Ll~~~~~~~~~~ 93 (204)
...++|+.|+..|+.+.++.|++.|++ ++. .+..|.||||+|+.. ++ .+++++|++.++ +++.+
T Consensus 150 ~~~~~L~~A~~~g~~~~v~~ll~~g~d-----~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~-~~iv~~Ll~~ga-dvn~~ 222 (301)
T 2b0o_E 150 PEPQRLWTAICNRDLLSVLEAFANGQD-----FGQPLPGPDAQAPEELVLHLAVKVANQAS-LPLVDFIIQNGG-HLDAK 222 (301)
T ss_dssp -CHHHHHHHHHTTCHHHHHHHHHTTCC-----TTSCEECSSSCSCEECHHHHHHHTCCTTT-HHHHHHHHHHSS-CTTCC
T ss_pred chHHHHhhhhhccCHHHHHHHHhcCCc-----ccccCCCcccCCCCccHHHHHHHhcccCc-HHHHHHHHhcCC-CCCCC
Confidence 356789999999999999999998776 555 588999999999997 67 899999999998 89999
Q ss_pred cCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCC
Q 037875 94 NNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMT 173 (204)
Q Consensus 94 ~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t 173 (204)
+..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..++.+++++|++ .|++ .|.|
T Consensus 223 d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~-------~d~~G~TpL~~A~~~~~~~iv~~Ll~-~ga~------~g~t 288 (301)
T 2b0o_E 223 AADGNTALHYAALYNQPDCLKLLLKGRALVGT-------VNEAGETALDIARKKHHKECEELLEQ-AQAG------TFAF 288 (301)
T ss_dssp CTTCCCHHHHHHHTTCHHHHHHHHHTTCCCSC-------CCTTSCCHHHHHHHHTCHHHHHHHHH-HHHH------TTSS
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHH-hcCC------CCCC
Confidence 99999999999999999999999999999887 68999999999999999999999998 5877 6899
Q ss_pred HhHHhccCC
Q 037875 174 ALQLLSCKP 182 (204)
Q Consensus 174 ~l~~a~~~~ 182 (204)
|||+|+..+
T Consensus 289 pLh~A~~~g 297 (301)
T 2b0o_E 289 PLHVDYSWV 297 (301)
T ss_dssp CCC------
T ss_pred hhHHHHhcC
Confidence 999998654
No 87
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=1.1e-25 Score=150.58 Aligned_cols=114 Identities=18% Similarity=0.263 Sum_probs=77.6
Q ss_pred ccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCC
Q 037875 57 RQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRND 136 (204)
Q Consensus 57 ~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 136 (204)
.++..|.||||+|+..++ .+++++|++.+. +++..+..|.||||+|+..|+.+++++|+++|++++. ++..
T Consensus 5 ~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~ 75 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGD-IPSVEYLLQNGS-DPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT-------TGYQ 75 (137)
T ss_dssp CCCTTCCCHHHHHHHHTC-HHHHHHHHHTTC-CSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCGG
T ss_pred CcCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccC-------cCCC
Confidence 455666677777777666 666777766665 5666666667777777777777777777776666554 4566
Q ss_pred CccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc
Q 037875 137 QSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC 180 (204)
Q Consensus 137 g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~ 180 (204)
|.||||+|+..|+.+++++|++ .|++++.+|..|.||+++|+.
T Consensus 76 g~t~L~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~tpl~~A~~ 118 (137)
T 3c5r_A 76 NDSPLHDAAKNGHVDIVKLLLS-YGASRNAVNIFGLRPVDYTDD 118 (137)
T ss_dssp GCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCGGGGCCC
T ss_pred CCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCCCCCHHHHHhh
Confidence 6777777777777777776666 477777777777777777653
No 88
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.93 E-value=5.4e-26 Score=164.05 Aligned_cols=137 Identities=22% Similarity=0.169 Sum_probs=106.3
Q ss_pred ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhh-CCCccccccCCCCc
Q 037875 21 TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRK-APGLLGMRNNNGET 99 (204)
Q Consensus 21 ~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~-~~~~~~~~~~~~~t 99 (204)
+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|+.. +. +++.++..|.|
T Consensus 70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~~g~-~~~~~d~~g~t 142 (222)
T 3ehr_A 70 AESIDNPLHEAAKRGNLSWLRECLDNRVG-----VNGLDKAGSTALYWACHGGH-KDIVEMLFTQPNI-ELNQQNKLGDT 142 (222)
T ss_dssp EEEESCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHTTSTTC-CCCCCCTTSCC
T ss_pred ccccccccccccccCcHHHHHHHHhCCCC-----ccccCCCCCCHHHHHHHcCC-HHHHHHHHcCCCC-CccccCCCCCC
Confidence 45678999999999999999999997665 78888899999999999998 8999999988 65 88889999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCC
Q 037875 100 ALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGM 172 (204)
Q Consensus 100 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~ 172 (204)
|||+|+..|+.+++++|+++|++++. ++..|.|||++|+..+..++++.|+. .+++.+..+.+|.
T Consensus 143 pL~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~t~l~~A~~~~~~~~l~~l~~-~~~~~~~~~~~~~ 207 (222)
T 3ehr_A 143 ALHAAAWKGYADIVQLLLAKGARTDL-------RNIEKKLAFDMATNAACASLLKKKQG-TDAVRTLSNAEDY 207 (222)
T ss_dssp HHHHHHHHTCHHHHHHHHHHTCCSCC-------CCTTSCCHHHHCCSHHHHHHHC------------------
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCcc-------ccCCCCCHHHHhcchhHHHHHHHHhc-cchhhhccchhhh
Confidence 99999999999999999999888776 58889999999999999999988888 5888877665543
No 89
>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1
Probab=99.93 E-value=3.7e-26 Score=152.89 Aligned_cols=126 Identities=21% Similarity=0.185 Sum_probs=114.4
Q ss_pred ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCC
Q 037875 19 VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGE 98 (204)
Q Consensus 19 ~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~ 98 (204)
..+..|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|++.+. +++.++..|.
T Consensus 5 ~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~g~t~L~~A~~~~~-~~~~~~Ll~~g~-~~~~~~~~g~ 77 (137)
T 3c5r_A 5 FTNHRGETLLHIASIKGDIPSVEYLLQNGSD-----PNVKDHAGWTPLHEACNHGH-LKVVELLLQHKA-LVNTTGYQND 77 (137)
T ss_dssp CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCC-----SCCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCGGGC
T ss_pred CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCcCCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-cccCcCCCCC
Confidence 3577899999999999999999999997766 88899999999999999999 999999999998 8999999999
Q ss_pred cHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHH
Q 037875 99 TALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAK 158 (204)
Q Consensus 99 t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~ 158 (204)
||||+|+..|+.+++++|+++|++++. ++..|.||+++|+..+..+++.+|..
T Consensus 78 t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~tpl~~A~~~~~~~~l~~l~~ 130 (137)
T 3c5r_A 78 SPLHDAAKNGHVDIVKLLLSYGASRNA-------VNIFGLRPVDYTDDESMKSLLLLPEK 130 (137)
T ss_dssp CHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred CHHHHHHHcCCHHHHHHHHHcCCCCCC-------CCCCCCCHHHHHhhccHHHHHhhccc
Confidence 999999999999999999999998876 68999999999999888888765544
No 90
>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C
Probab=99.93 E-value=2.9e-25 Score=148.40 Aligned_cols=125 Identities=19% Similarity=0.177 Sum_probs=111.8
Q ss_pred cccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCC
Q 037875 58 QNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQ 137 (204)
Q Consensus 58 ~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g 137 (204)
....+.||||+|+..|+ .+++++|++.+. +++..+..|.||||+|+..|+.+++++|++.|++++. ++..|
T Consensus 10 ~~~~~~t~l~~A~~~g~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~d~~g 80 (136)
T 2jab_A 10 HGSDLGKKLLEAARAGQ-DDEVRILMANGA-DVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA-------VDAIG 80 (136)
T ss_dssp --CHHHHHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTC
T ss_pred ccccccHHHHHHHHhCC-HHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-------CCCCC
Confidence 44568899999999999 999999999997 8899999999999999999999999999999998876 58899
Q ss_pred ccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhcc
Q 037875 138 STVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERG 192 (204)
Q Consensus 138 ~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g 192 (204)
.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+.. .++.+.+++.|
T Consensus 81 ~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G 136 (136)
T 2jab_A 81 FTPLHLAAFIGHLEIAEVLLK-HGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN 136 (136)
T ss_dssp CCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred CCHHHHHHHcCCHHHHHHHHH-cCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence 999999999999999999999 6999999999999999999854 46667766654
No 91
>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1
Probab=99.92 E-value=1.9e-24 Score=142.12 Aligned_cols=123 Identities=29% Similarity=0.376 Sum_probs=113.1
Q ss_pred CCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccH
Q 037875 61 AGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTV 140 (204)
Q Consensus 61 ~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~ 140 (204)
+|.||||+|+..++ .+++++|++.+. +++..+..|.||||+|+..++.+++++|++.|++++. ++..|.||
T Consensus 1 ~g~t~L~~A~~~~~-~~~v~~Ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~~~~g~t~ 71 (126)
T 1n0r_A 1 NGRTPLHLAARNGH-LEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-------KDKNGRTP 71 (126)
T ss_dssp CCCCHHHHHHHHTC-HHHHHHHHHHTC-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCH
T ss_pred CCccHHHHHHHcCc-HHHHHHHHHcCC-CCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcc-------cCCCCCcH
Confidence 48899999999999 999999999987 7888999999999999999999999999999998776 58899999
Q ss_pred HHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc--CCcchhhhhhccc
Q 037875 141 LHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC--KPEAFKLKQERGF 193 (204)
Q Consensus 141 l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g~ 193 (204)
||+|+..++.+++++|++ .|++++.++..|.||+++|+. +.++++.+++.|+
T Consensus 72 l~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga 125 (126)
T 1n0r_A 72 LHLAARNGHLEVVKLLLE-AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125 (126)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred HHHHHHcChHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence 999999999999999999 699999999999999999985 4577888887775
No 92
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=6e-25 Score=144.36 Aligned_cols=113 Identities=19% Similarity=0.132 Sum_probs=102.6
Q ss_pred ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcH
Q 037875 21 TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETA 100 (204)
Q Consensus 21 ~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~ 100 (204)
+..|.+|||+|+..|+.+++++|++.|.+ ++..+..|.||||+|+..++ .+++++|++.++ +++.++..|.||
T Consensus 4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~-----~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~~~~d~~g~tp 76 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGDLDEVKDYVAKGED-----VNRTLEGGRKPLHYAADCGQ-LEILEFLLLKGA-DINAPDKHHITP 76 (123)
T ss_dssp ---CHHHHHHHHHTTCHHHHHHHHHTTCC-----TTSCCTTSSCHHHHHHHTTC-HHHHHHHHTTTC-CTTCCCTTSCCH
T ss_pred ccccchHHHHHHHcCCHHHHHHHHHcCCC-----cCccCCCCCcHHHHHHHcCC-HHHHHHHHHcCC-CCCcCCCCCCCH
Confidence 45688999999999999999999997766 88899999999999999999 999999999997 899999999999
Q ss_pred HHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHh
Q 037875 101 LFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVIS 147 (204)
Q Consensus 101 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 147 (204)
||+|+..++.+++++|+++|++++. ++..|.||+|+|...
T Consensus 77 L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~g~t~l~~A~~~ 116 (123)
T 3aaa_C 77 LLSAVYEGHVSCVKLLLSKGADKTV-------KGPDGLTAFEATDNQ 116 (123)
T ss_dssp HHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHCCCH
T ss_pred HHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHhCCH
Confidence 9999999999999999999998876 689999999999544
No 93
>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A
Probab=99.92 E-value=1.8e-24 Score=142.05 Aligned_cols=111 Identities=20% Similarity=0.161 Sum_probs=102.7
Q ss_pred ccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCc
Q 037875 59 NKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQS 138 (204)
Q Consensus 59 ~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~ 138 (204)
+..|.||||+|+..++ .+++++|++.+. +++..+..|.||||+|+..++.+++++|++.|++++. ++..|+
T Consensus 4 ~~~~~~~l~~A~~~~~-~~~v~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~-------~d~~g~ 74 (123)
T 3aaa_C 4 GSMCDKEFMWALKNGD-LDEVKDYVAKGE-DVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-------PDKHHI 74 (123)
T ss_dssp ---CHHHHHHHHHTTC-HHHHHHHHHTTC-CTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTC-------CCTTSC
T ss_pred ccccchHHHHHHHcCC-HHHHHHHHHcCC-CcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCc-------CCCCCC
Confidence 4577899999999999 999999999997 8899999999999999999999999999999998876 588999
Q ss_pred cHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc
Q 037875 139 TVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS 179 (204)
Q Consensus 139 t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~ 179 (204)
||||+|+..++.+++++|++ .|++++.+|..|.||+++|.
T Consensus 75 tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~ 114 (123)
T 3aaa_C 75 TPLLSAVYEGHVSCVKLLLS-KGADKTVKGPDGLTAFEATD 114 (123)
T ss_dssp CHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHCC
T ss_pred CHHHHHHHcCCHHHHHHHHH-cCCCCCCcCCCCCCHHHHhC
Confidence 99999999999999999999 69999999999999999994
No 94
>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A
Probab=99.91 E-value=9e-25 Score=149.36 Aligned_cols=132 Identities=13% Similarity=0.062 Sum_probs=113.3
Q ss_pred hcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccC
Q 037875 55 MTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQR 134 (204)
Q Consensus 55 ~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~ 134 (204)
.+..+..|.||||+|+..|+ .+++++|++.+. +++..+..|.||||+|+ .|+.+++++|++.|++++. ++
T Consensus 5 ~~~~~~~~~t~L~~A~~~g~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~-------~d 74 (156)
T 1bi7_B 5 AGSSMEPSADWLATAAARGR-VEEVRALLEAGA-NPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNC-------AD 74 (156)
T ss_dssp -----CCSTTHHHHHHHHTC-HHHHHHHHTTTC-CTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCC-------CC
T ss_pred ccCCCccchHHHHHHHHcCC-HHHHHHHHHcCC-CCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCC-------cC
Confidence 34567789999999999999 999999999987 89999999999999985 8999999999999998887 58
Q ss_pred CCCcc-HHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc--cCCcchhhhhhccchhhh
Q 037875 135 NDQST-VLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS--CKPEAFKLKQERGFFKKL 197 (204)
Q Consensus 135 ~~g~t-~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~--~~~~~~~~~~~~g~~~~~ 197 (204)
..|.| |||+|+..|+.+++++|++ .|++++.++..|.||||+|+ .+.++.+.+++.|.....
T Consensus 75 ~~g~ttpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~ 139 (156)
T 1bi7_B 75 PATLTRPVHDAAREGFLDTLVVLHR-AGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRG 139 (156)
T ss_dssp TTTCCCHHHHHHHHTCHHHHHHHHH-HTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC-----
T ss_pred CCCCcHHHHHHHHCCCHHHHHHHHH-cCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCc
Confidence 88999 9999999999999999999 59999999999999999998 456788888888876544
No 95
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.91 E-value=6.1e-25 Score=154.05 Aligned_cols=112 Identities=21% Similarity=0.160 Sum_probs=92.2
Q ss_pred ccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCcccccc-CCCCc
Q 037875 21 TVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRN-NNGET 99 (204)
Q Consensus 21 ~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~t 99 (204)
+..|.||||+|+..|+.++++.|++ |.+ ++.++..|.||||+|+..++ .+++++|++.++ +++..+ ..|.|
T Consensus 41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-----~~~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga-~~~~~~~~~g~t 112 (183)
T 3deo_A 41 VSEYETPWWTAARKADEQALSQLLE-DRD-----VDAVDENGRTALLFVAGLGS-DKCVRLLAEAGA-DLDHRDMRGGLT 112 (183)
T ss_dssp HHHHHHHHHHHHHTTCHHHHHHHTT-TSC-----TTCCCTTSCCHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCSSSSCC
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHh-cCC-----CCCcCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCcCCCCCCCC
Confidence 3467888888888888888888888 665 77788888888888888888 788888888887 777776 77888
Q ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHh
Q 037875 100 ALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVIS 147 (204)
Q Consensus 100 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~ 147 (204)
|||+|+..|+.+++++|+++|++++. ++..|+||||+|+..
T Consensus 113 pL~~A~~~~~~~~v~~Ll~~ga~~~~-------~d~~g~tpl~~A~~~ 153 (183)
T 3deo_A 113 ALHMAAGYVRPEVVEALVELGADIEV-------EDERGLTALELAREI 153 (183)
T ss_dssp HHHHHHHTTCHHHHHHHHHHTCCTTC-------CCTTSCCHHHHHHHH
T ss_pred HHHHHHhcCcHHHHHHHHHcCCCCcC-------CCCCCCCHHHHHHHh
Confidence 88888888888888888888887776 578888888888753
No 96
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.91 E-value=1.9e-23 Score=160.89 Aligned_cols=144 Identities=14% Similarity=0.166 Sum_probs=115.5
Q ss_pred ccCCchHHHHHHhc-CChHHHHHHHhhCchhhhhhhcccc--cCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCC
Q 037875 21 TVHDDTVLHMATYF-KRDDLALKLLDEIPELYIHKMTRQN--KAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNG 97 (204)
Q Consensus 21 ~~~~~~~L~~A~~~-~~~~~v~~Ll~~g~~~~~~~~~~~~--~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 97 (204)
...+.++||.|+.. ++.++++.|++.|++ ++..+ ..|.||||+|+..++ .+++++|++.++ +++..+..|
T Consensus 196 ~~~~~t~L~~Aa~~~g~~~~v~~LL~~Gad-----vn~~~~~~~g~TpLh~Aa~~g~-~~iv~~LL~~Ga-dvn~~d~~G 268 (368)
T 3jue_A 196 SLHPGALLFRASGHPPSLPTMADALAHGAD-----VNWVNGGQDNATPLIQATAANS-LLACEFLLQNGA-NVNQADSAG 268 (368)
T ss_dssp -CCHHHHHHHHTSSSCCHHHHHHHHHTTCC-----TTCCCTTTTCCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTS
T ss_pred cCCCCcHHHHHHHccCCHHHHHHHHHcCCC-----CCccccccCCCCHHHHHHHCCC-HHHHHHHHHcCC-CCCCCCCCC
Confidence 34567899999999 999999999997776 77777 889999999999999 999999999998 899999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhc---hhhcccCCCCCCH
Q 037875 98 ETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYK---YLIGEKDMDGMTA 174 (204)
Q Consensus 98 ~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g---~~~~~~~~~g~t~ 174 (204)
.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..++.+++++|+.. + .+....+..+.|+
T Consensus 269 ~TpLh~A~~~g~~~~v~~LL~~Gad~~~-------~d~~G~TpL~~A~~~g~~~iv~lLl~~-~~~~~~~~~~~~~~~t~ 340 (368)
T 3jue_A 269 RGPLHHATILGHTGLACLFLKRGADLGA-------RDSEGRDPLTIAMETANADIVTLLRLA-KMREAEAAQGQAGDETY 340 (368)
T ss_dssp CCHHHHHHHHTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHHH-HC---------------
T ss_pred CCHHHHHHHcCcHHHHHHHHHCcCCCCC-------cCCCCCCHHHHHHHCCCHHHHHHHHHc-CCCcccccccCCCCCCH
Confidence 9999999999999999999999999887 689999999999999999999999884 4 3444556778888
Q ss_pred hHHhc
Q 037875 175 LQLLS 179 (204)
Q Consensus 175 l~~a~ 179 (204)
++++.
T Consensus 341 l~i~~ 345 (368)
T 3jue_A 341 LDIFR 345 (368)
T ss_dssp -----
T ss_pred HHHHH
Confidence 88775
No 97
>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A
Probab=99.91 E-value=3.4e-24 Score=154.59 Aligned_cols=134 Identities=19% Similarity=0.191 Sum_probs=111.4
Q ss_pred hcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhc-ccCCCCCCCCcccc
Q 037875 55 MTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGK-IADYDQPSKQPFLQ 133 (204)
Q Consensus 55 ~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~-~~~~~~~~~~~~~~ 133 (204)
++..+..|.||||+|+..|+ .+++++|++.+. +++..+..|.||||+|+..|+.+++++|++. |++++. +
T Consensus 66 v~~~~~~g~t~L~~A~~~g~-~~~v~~Ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~-------~ 136 (222)
T 3ehr_A 66 VAEQAESIDNPLHEAAKRGN-LSWLRECLDNRV-GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQ-------Q 136 (222)
T ss_dssp HHHHEEEESCHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCC-------C
T ss_pred ccccccccccccccccccCc-HHHHHHHHhCCC-CccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccc-------c
Confidence 44556788999999999999 999999999997 8999999999999999999999999999998 888776 6
Q ss_pred CCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccchhhhh
Q 037875 134 RNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGFFKKLL 198 (204)
Q Consensus 134 ~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~~~~~~ 198 (204)
+..|+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+.. .++++.+...|..+.+.
T Consensus 137 d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~ 202 (222)
T 3ehr_A 137 NKLGDTALHAAAWKGYADIVQLLLA-KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLS 202 (222)
T ss_dssp CTTSCCHHHHHHHHTCHHHHHHHHH-HTCCSCCCCTTSCCHHHHCCSHHHHHHHC------------
T ss_pred CCCCCCHHHHHHHcCCHHHHHHHHH-cCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhcc
Confidence 8999999999999999999999999 5999999999999999999854 46666677777666543
No 98
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.91 E-value=2.8e-23 Score=166.47 Aligned_cols=139 Identities=17% Similarity=0.149 Sum_probs=114.7
Q ss_pred CchHHHHHHhcCChHHHHHHHhhCchhhhhhhccc------ccCCCcHHHHHHh---cCCCHHHHHHHHhhCCCcccccc
Q 037875 24 DDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQ------NKAGNTVLHATAT---SSRALPVADKLLRKAPGLLGMRN 94 (204)
Q Consensus 24 ~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~------~~~g~~~l~~a~~---~~~~~~~~~~Ll~~~~~~~~~~~ 94 (204)
..+.||.|+..|+.+.++.|++.|++ ++.. +..|.||||+|+. .++ .+++++|++.|+ +++.++
T Consensus 132 ~~~~L~~A~~~g~~~~v~~ll~~g~~-----~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~-~~~v~~Ll~~ga-~vn~~d 204 (497)
T 3lvq_E 132 EPQRLWTAICNRDLLSVLEAFANGQD-----FGQPLPGPDAQAPEELVLHLAVKVANQAS-LPLVDFIIQNGG-HLDAKA 204 (497)
T ss_dssp CHHHHHHHHHHTCHHHHHHHHHTTCC-----SSSCBCCSSSCCSCBCHHHHHHHTCCTTT-HHHHHHHHHHSC-CTTCCC
T ss_pred cHHHHHHHHhccCHHHHHHHHhhccc-----ccCCCCCcccccccchHHHHHHHhccccc-HHHHHHHHHcCC-CCCccC
Confidence 44779999999999999999998876 5555 7899999999966 788 899999999998 899999
Q ss_pred CCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCH
Q 037875 95 NNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTA 174 (204)
Q Consensus 95 ~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~ 174 (204)
..|.||||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.+++++|++ .|++++.......++
T Consensus 205 ~~g~TpLh~A~~~g~~~~v~~Ll~~ga~~~~-------~d~~g~tpl~~A~~~~~~~~~~~Ll~-~ga~~~~~~~h~~~~ 276 (497)
T 3lvq_E 205 ADGNTALHYAALYNQPDCLKLLLKGRALVGT-------VNEAGETALDIARKKHHKECEELLEQ-AQAGTFAFPLHVDYS 276 (497)
T ss_dssp SSSCCHHHHHTTTTCHHHHHHHHHTCCCCSC-------CCTTCCCHHHHHHHTTCHHHHHHHHH-TCC------------
T ss_pred CCCCcHHHHHHHcCCHHHHHHHHHcCCCCCC-------cCCCCCCHHHHHHHcCCHHHHHHHHH-hCCCCCCCcceeecc
Confidence 9999999999999999999999999999887 68999999999999999999999999 699998854444444
Q ss_pred hHH
Q 037875 175 LQL 177 (204)
Q Consensus 175 l~~ 177 (204)
+..
T Consensus 277 ~~~ 279 (497)
T 3lvq_E 277 WVI 279 (497)
T ss_dssp ---
T ss_pred ccC
Confidence 333
No 99
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.90 E-value=8.3e-24 Score=154.81 Aligned_cols=110 Identities=21% Similarity=0.168 Sum_probs=101.3
Q ss_pred cCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCcccccc-CCCCcH
Q 037875 22 VHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRN-NNGETA 100 (204)
Q Consensus 22 ~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~-~~~~t~ 100 (204)
..|.||||+|+..|+.+++++|++ |.+ ++.++..|.||||+|+..|+ .+++++|++.++ +++..+ ..|.||
T Consensus 43 ~~g~t~L~~A~~~g~~~~v~~Ll~-~~~-----~~~~d~~g~t~L~~A~~~g~-~~~v~~Ll~~ga-~~~~~~~~~g~t~ 114 (244)
T 3ui2_A 43 SEYETPWWTAARKADEQALSQLLE-DRD-----VDAVDENGRTALLFVAGLGS-DKCVRLLAEAGA-DLDHRDMRGGLTA 114 (244)
T ss_dssp HHHHHHHHHHHTTTCHHHHHHTTT-TCC-----TTCBCTTSCBHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCSSSCCCH
T ss_pred cCCCCHHHHHHHcCCHHHHHHHHc-CCC-----CCCcCCCCCCHHHHHHHCCC-HHHHHHHHHcCC-CCCcCCCCCCCCH
Confidence 468999999999999999999999 766 88899999999999999999 899999999998 888887 889999
Q ss_pred HHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHH
Q 037875 101 LFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVI 146 (204)
Q Consensus 101 l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~ 146 (204)
||+|+..|+.+++++|+++|++++. ++..|.||||+|+.
T Consensus 115 L~~A~~~g~~~~v~~Ll~~ga~~~~-------~d~~g~t~l~~A~~ 153 (244)
T 3ui2_A 115 LHMAAGYVRPEVVEALVELGADIEV-------EDERGLTALELARE 153 (244)
T ss_dssp HHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTCCCHHHHHHH
T ss_pred HHHHHHcCCHHHHHHHHHCCCCCCC-------CCCCCCcHHHHHHH
Confidence 9999999999999999999999886 57889999888873
No 100
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.90 E-value=3.1e-25 Score=171.41 Aligned_cols=154 Identities=11% Similarity=-0.024 Sum_probs=119.4
Q ss_pred CCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCc---cccccCCCCc
Q 037875 23 HDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGL---LGMRNNNGET 99 (204)
Q Consensus 23 ~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~---~~~~~~~~~t 99 (204)
++.||||+|+..|+.+++++|++.|+... ..+..+..|.||||+|+..|+ .+++++|+++++ + .+..+.+ .|
T Consensus 91 ~~~T~Lh~Aa~~G~~e~v~~Ll~~ga~~~--~~~~~~~~~~tpL~~Aa~~G~-~eiv~~Ll~~ga-d~~~~~i~~~~-~T 165 (376)
T 2aja_A 91 KSEVICFVAAITGCSSALDTLCLLLTSDE--IVKVIQAENYQAFRLAAENGH-LHVLNRLCELAP-TEIMAMIQAEN-YH 165 (376)
T ss_dssp CHHHHHHHHHHHCCHHHHHHHTTC--CCS--SCC--CHHHHHHHHHHHHTTC-HHHHHHHHHSCT-TTHHHHHSHHH-HH
T ss_pred CcCCHHHHHHHcCCHHHHHHHHHcCCcHH--HHHHhccCCCCHHHHHHHcCC-HHHHHHHHhCCC-CccccccCCCC-CC
Confidence 35699999999999999999999776210 012334567789999999999 999999999986 3 2222333 89
Q ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHH-HhCCHHHHHHHHHHhchhhcccCCCCCCHhHHh
Q 037875 100 ALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAV-ISQHFELALEIAKEYKYLIGEKDMDGMTALQLL 178 (204)
Q Consensus 100 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~-~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a 178 (204)
|||+|+..|+.+++++|+++|++++. +..+..|.||||+|+ ..|+.+++++|++ .|++ |.||+++|
T Consensus 166 pLh~Aa~~G~~eiv~~Ll~~ga~~~~-----~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~-~ga~-------~~taL~~A 232 (376)
T 2aja_A 166 AFRLAAENGHLHVLNRLCELAPTEAT-----AMIQAENYYAFRWAAVGRGHHNVINFLLD-CPVM-------LAYAEIHE 232 (376)
T ss_dssp HHHHHHHTTCHHHHHHHHHSCGGGHH-----HHHHHHHHHHHHHHHSTTCCHHHHHHHTT-SHHH-------HHHHHHCT
T ss_pred HHHHHHHCCCHHHHHHHHHcCCccch-----hccCCCCCCHHHHHHHHCCCHHHHHHHHh-CCCc-------cchHHHHH
Confidence 99999999999999999999887542 013667899999999 9999999999998 5754 78999999
Q ss_pred ccC--Ccchhhhhhccch
Q 037875 179 SCK--PEAFKLKQERGFF 194 (204)
Q Consensus 179 ~~~--~~~~~~~~~~g~~ 194 (204)
+.+ .++.+++.+.|..
T Consensus 233 a~~g~~evv~lL~~~ga~ 250 (376)
T 2aja_A 233 FEYGEKYVNPFIARHVNR 250 (376)
T ss_dssp TTTTTTTHHHHHHHHHHH
T ss_pred HHCCCHHHHHHHHhcCcc
Confidence 855 4677777777654
No 101
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.89 E-value=2.6e-22 Score=149.51 Aligned_cols=130 Identities=18% Similarity=0.106 Sum_probs=114.4
Q ss_pred CchHHHHHHhcCChHHHHHHHhhCchhhhhh-hcccccCCCcHHHHHHhc---CCCHHHHHHHHhhCCCccccccCCCCc
Q 037875 24 DDTVLHMATYFKRDDLALKLLDEIPELYIHK-MTRQNKAGNTVLHATATS---SRALPVADKLLRKAPGLLGMRNNNGET 99 (204)
Q Consensus 24 ~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~~~~~~~g~~~l~~a~~~---~~~~~~~~~Ll~~~~~~~~~~~~~~~t 99 (204)
..++|+.|+..|+.+.++.+++.|.+..... ++..+..|.||||+|+.. ++ .+++++|++.|+ +++.++..|.|
T Consensus 130 ~l~~l~~a~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~-~~~v~~Ll~~ga-~in~~d~~g~T 207 (278)
T 1dcq_A 130 KLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTS-LHIVDFLVQNSG-NLDKQTGKGST 207 (278)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTT-HHHHHHHHHHCS-CTTCCCTTCCC
T ss_pred hhhhhhhHhhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccch-HHHHHHHHHCCC-CccccCCCCCC
Confidence 3578999999999999999999887743322 455578899999999999 77 899999999998 89999999999
Q ss_pred HHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHHHHHhchh
Q 037875 100 ALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEIAKEYKYL 163 (204)
Q Consensus 100 ~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~ 163 (204)
|||+|+..|+.+++++|+++|++++. +|..|.||||+|+..|+.++++.|++ .|++
T Consensus 208 pLh~A~~~g~~~~v~~Ll~~gad~~~-------~d~~g~tpL~~A~~~~~~~~v~~Ll~-~ga~ 263 (278)
T 1dcq_A 208 ALHYCCLTDNAECLKLLLRGKASIEI-------ANESGETPLDIAKRLKHEHCEELLTQ-ALSG 263 (278)
T ss_dssp HHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCHHHHHHHTTCHHHHHHHHH-HHTT
T ss_pred HHHHHHHcCCHHHHHHHHHcCCCCCC-------ccCCCCCHHHHHHHcCCHHHHHHHHH-cCCC
Confidence 99999999999999999999999887 68999999999999999999999988 4764
No 102
>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A
Probab=99.89 E-value=3.7e-23 Score=144.94 Aligned_cols=111 Identities=26% Similarity=0.222 Sum_probs=103.7
Q ss_pred ccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccC-CCC
Q 037875 59 NKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQR-NDQ 137 (204)
Q Consensus 59 ~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~-~~g 137 (204)
+..|.||||+|+..|+ .+++++|+. +. +++..+..|.||||+|+..|+.+++++|+++|++++. ++ ..|
T Consensus 41 ~~~g~t~L~~A~~~g~-~~~v~~Ll~-~~-~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~~~~~g 110 (183)
T 3deo_A 41 VSEYETPWWTAARKAD-EQALSQLLE-DR-DVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH-------RDMRGG 110 (183)
T ss_dssp HHHHHHHHHHHHHTTC-HHHHHHHTT-TS-CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTC-------CCSSSS
T ss_pred CCCCCCHHHHHHHcCC-HHHHHHHHh-cC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-------CCCCCC
Confidence 4578999999999999 999999999 76 8999999999999999999999999999999999876 35 789
Q ss_pred ccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc
Q 037875 138 STVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC 180 (204)
Q Consensus 138 ~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~ 180 (204)
+||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+.
T Consensus 111 ~tpL~~A~~~~~~~~v~~Ll~-~ga~~~~~d~~g~tpl~~A~~ 152 (183)
T 3deo_A 111 LTALHMAAGYVRPEVVEALVE-LGADIEVEDERGLTALELARE 152 (183)
T ss_dssp CCHHHHHHHTTCHHHHHHHHH-HTCCTTCCCTTSCCHHHHHHH
T ss_pred CCHHHHHHhcCcHHHHHHHHH-cCCCCcCCCCCCCCHHHHHHH
Confidence 999999999999999999999 599999999999999999974
No 103
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.89 E-value=1.9e-22 Score=125.95 Aligned_cols=93 Identities=27% Similarity=0.352 Sum_probs=79.1
Q ss_pred CCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHH
Q 037875 23 HDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALF 102 (204)
Q Consensus 23 ~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~ 102 (204)
+|.||||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|++.++ +++.++..|.||||
T Consensus 1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~-----~n~~d~~g~t~L~~A~~~~~-~~~v~~Ll~~ga-~~~~~d~~g~t~l~ 73 (93)
T 1n0q_A 1 NGRTPLHLAARNGHLEVVKLLLEAGAD-----VNAKDKNGRTPLHLAARNGH-LEVVKLLLEAGA-DVNAKDKNGRTPLH 73 (93)
T ss_dssp --CCHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTSCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTSCCHHH
T ss_pred CCCcHHHHHHHcCCHHHHHHHHHcCCC-----CcccCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCccCCCCCCHHH
Confidence 478899999999999999999986665 78888889999999999888 889999998887 78888888899999
Q ss_pred HHHHcCCHHHHHHHHhcccC
Q 037875 103 RSARYGKADIFNFLAGKIAD 122 (204)
Q Consensus 103 ~a~~~~~~~~~~~L~~~~~~ 122 (204)
+|+..|+.+++++|+++|++
T Consensus 74 ~A~~~~~~~~~~~Ll~~ga~ 93 (93)
T 1n0q_A 74 LAARNGHLEVVKLLLEAGAY 93 (93)
T ss_dssp HHHHTTCHHHHHHHHHTTCC
T ss_pred HHHHcCCHHHHHHHHHcCCC
Confidence 99999999999999888763
No 104
>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1
Probab=99.88 E-value=2.5e-24 Score=166.32 Aligned_cols=153 Identities=14% Similarity=0.064 Sum_probs=123.9
Q ss_pred HHHHHHHhhhcccc-----ccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHH
Q 037875 5 VIEVCRKISDHALH-----VLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVA 79 (204)
Q Consensus 5 ~~~~~~~l~~~~~~-----~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~ 79 (204)
..+++++|+++|.. ..+..+.||||+|+..|+.++|++|++.|++.....++..+ .||||+|+..|+ .+++
T Consensus 104 ~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~---~TpLh~Aa~~G~-~eiv 179 (376)
T 2aja_A 104 CSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN---YHAFRLAAENGH-LHVL 179 (376)
T ss_dssp CHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH---HHHHHHHHHTTC-HHHH
T ss_pred CHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC---CCHHHHHHHCCC-HHHH
Confidence 46889999999872 23446789999999999999999999988653222344333 899999999999 9999
Q ss_pred HHHHhhCCCcccc--ccCCCCcHHHHHH-HcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCHHHHHHH
Q 037875 80 DKLLRKAPGLLGM--RNNNGETALFRSA-RYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHFELALEI 156 (204)
Q Consensus 80 ~~Ll~~~~~~~~~--~~~~~~t~l~~a~-~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~L 156 (204)
++|+++++ +++. .+..|.||||+|+ ..|+.+++++|++.|+ .|.||+|+|+..|+.+++++|
T Consensus 180 ~~Ll~~ga-~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga--------------~~~taL~~Aa~~g~~evv~lL 244 (376)
T 2aja_A 180 NRLCELAP-TEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV--------------MLAYAEIHEFEYGEKYVNPFI 244 (376)
T ss_dssp HHHHHSCG-GGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH--------------HHHHHHHCTTTTTTTTHHHHH
T ss_pred HHHHHcCC-ccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC--------------ccchHHHHHHHCCCHHHHHHH
Confidence 99999998 6666 7888999999999 9999999999999754 278999999999999999999
Q ss_pred HHHhchhhcccCCCCCCHhHHhccC
Q 037875 157 AKEYKYLIGEKDMDGMTALQLLSCK 181 (204)
Q Consensus 157 l~~~g~~~~~~~~~g~t~l~~a~~~ 181 (204)
++ .|++++..+. +++.|+.+
T Consensus 245 ~~-~ga~~~~~~~----~l~~A~~~ 264 (376)
T 2aja_A 245 AR-HVNRLKEMHD----AFKLSNPD 264 (376)
T ss_dssp HH-HHHHHHHHHT----TTTTTSSS
T ss_pred Hh-cCcccccccH----HHHHHHHC
Confidence 98 5999877653 44555433
No 105
>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A
Probab=99.88 E-value=1.3e-22 Score=148.53 Aligned_cols=139 Identities=21% Similarity=0.115 Sum_probs=119.1
Q ss_pred cCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHH
Q 037875 22 VHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETAL 101 (204)
Q Consensus 22 ~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l 101 (204)
..+.+++.+++..|+.+.+..+...+.+ .+..|.||||+|+..|+ .+++++|+. +. +++.++..|.|||
T Consensus 13 ~~~~~~~l~~~~~g~~~~~~~~~~~~~~--------~~~~g~t~L~~A~~~g~-~~~v~~Ll~-~~-~~~~~d~~g~t~L 81 (244)
T 3ui2_A 13 GEGAMEYLIEWKDGHSPSWVPSSYIAAD--------VVSEYETPWWTAARKAD-EQALSQLLE-DR-DVDAVDENGRTAL 81 (244)
T ss_dssp TTTEEEEEEEESSCCCCEEEEGGGSCHH--------HHHHHHHHHHHHHTTTC-HHHHHHTTT-TC-CTTCBCTTSCBHH
T ss_pred CCCccHHHHHHHcCCCcccccccccccc--------cccCCCCHHHHHHHcCC-HHHHHHHHc-CC-CCCCcCCCCCCHH
Confidence 3456666777777776665544443322 23578999999999999 899999999 76 8999999999999
Q ss_pred HHHHHcCCHHHHHHHHhcccCCCCCCCCccccC-CCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc
Q 037875 102 FRSARYGKADIFNFLAGKIADYDQPSKQPFLQR-NDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS 179 (204)
Q Consensus 102 ~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~-~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~ 179 (204)
|+|+..|+.+++++|+++|++++. ++ ..|+||||+|+..|+.+++++|++ .|++++.+|..|.||||+|+
T Consensus 82 ~~A~~~g~~~~v~~Ll~~ga~~~~-------~~~~~g~t~L~~A~~~g~~~~v~~Ll~-~ga~~~~~d~~g~t~l~~A~ 152 (244)
T 3ui2_A 82 LFVAGLGSDKCVRLLAEAGADLDH-------RDMRGGLTALHMAAGYVRPEVVEALVE-LGADIEVEDERGLTALELAR 152 (244)
T ss_dssp HHHHHHTCHHHHHHHHHTTCCTTC-------CCSSSCCCHHHHHHHTTCHHHHHHHHH-TTCCTTCCCTTCCCHHHHHH
T ss_pred HHHHHCCCHHHHHHHHHcCCCCCc-------CCCCCCCCHHHHHHHcCCHHHHHHHHH-CCCCCCCCCCCCCcHHHHHH
Confidence 999999999999999999999886 35 779999999999999999999999 69999999999999999997
No 106
>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1
Probab=99.88 E-value=7.8e-22 Score=123.11 Aligned_cols=93 Identities=27% Similarity=0.369 Sum_probs=85.8
Q ss_pred CCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccH
Q 037875 61 AGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTV 140 (204)
Q Consensus 61 ~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~ 140 (204)
+|.||||+|+..++ .+++++|++.++ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..|+||
T Consensus 1 ~g~t~L~~A~~~~~-~~~v~~Ll~~g~-~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~-------~d~~g~t~ 71 (93)
T 1n0q_A 1 NGRTPLHLAARNGH-LEVVKLLLEAGA-DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-------KDKNGRTP 71 (93)
T ss_dssp --CCHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTSCCH
T ss_pred CCCcHHHHHHHcCC-HHHHHHHHHcCC-CCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCc-------cCCCCCCH
Confidence 47899999999999 999999999998 8999999999999999999999999999999998886 58899999
Q ss_pred HHHHHHhCCHHHHHHHHHHhchh
Q 037875 141 LHMAVISQHFELALEIAKEYKYL 163 (204)
Q Consensus 141 l~~a~~~~~~~~~~~Ll~~~g~~ 163 (204)
||+|+..|+.+++++|++ .|++
T Consensus 72 l~~A~~~~~~~~~~~Ll~-~ga~ 93 (93)
T 1n0q_A 72 LHLAARNGHLEVVKLLLE-AGAY 93 (93)
T ss_dssp HHHHHHTTCHHHHHHHHH-TTCC
T ss_pred HHHHHHcCCHHHHHHHHH-cCCC
Confidence 999999999999999998 5764
No 107
>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}
Probab=99.88 E-value=2e-22 Score=151.78 Aligned_cols=125 Identities=20% Similarity=0.150 Sum_probs=106.1
Q ss_pred HHHHHHhhhcccccc--------ccCCchHHHHHHhc---CChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCC
Q 037875 6 IEVCRKISDHALHVL--------TVHDDTVLHMATYF---KRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSR 74 (204)
Q Consensus 6 ~~~~~~l~~~~~~~~--------~~~~~~~L~~A~~~---~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~ 74 (204)
++.++.+++.|.+++ +..|.||||+|+.. ++.+++++|++.|++ ++.+|..|.||||+|+..++
T Consensus 164 ~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gad-----vn~~d~~G~TpLh~A~~~g~ 238 (301)
T 2b0o_E 164 LLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-----LDAKAADGNTALHYAALYNQ 238 (301)
T ss_dssp HHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSC-----TTCCCTTCCCHHHHHHHTTC
T ss_pred HHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCC-----CCCCCCCCCCHHHHHHHcCC
Confidence 456778889988764 56799999999997 899999999997766 88999999999999999999
Q ss_pred CHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHHHhCCH
Q 037875 75 ALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAVISQHF 150 (204)
Q Consensus 75 ~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~~~~~~ 150 (204)
.+++++|++.|+ +++.++..|.|||++|+..|+.+++++|+++|++ .|.||||+|+..|+.
T Consensus 239 -~~~v~~Ll~~ga-d~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------------~g~tpLh~A~~~g~~ 299 (301)
T 2b0o_E 239 -PDCLKLLLKGRA-LVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------------TFAFPLHVDYSWVIS 299 (301)
T ss_dssp -HHHHHHHHHTTC-CCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------------TTSSCCC--------
T ss_pred -HHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------------CCCChhHHHHhcCCc
Confidence 999999999998 8999999999999999999999999999998774 478999999988764
No 108
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=1.7e-22 Score=130.95 Aligned_cols=109 Identities=27% Similarity=0.323 Sum_probs=78.9
Q ss_pred ccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCC
Q 037875 57 RQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRND 136 (204)
Q Consensus 57 ~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 136 (204)
.+|..|.||||+|+..++ .+++++|++.+. +++..+..|.||||+|+..++.+++++|++.|++++. ++..
T Consensus 4 ~~d~~g~t~L~~A~~~~~-~~~~~~Ll~~g~-~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-------~d~~ 74 (115)
T 2l6b_A 4 WGSKDGNTPLHNAAKNGH-AEEVKKLLSKGA-DVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNA-------RSKD 74 (115)
T ss_dssp CCSCSSCCHHHHHHHHTC-HHHHHHHTTTTC-CSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTC-------CCTT
T ss_pred ccCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcc-------cCCC
Confidence 456677777777777777 677777777766 6667777777777777777777777777777776665 4677
Q ss_pred CccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHh
Q 037875 137 QSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTAL 175 (204)
Q Consensus 137 g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l 175 (204)
|.||||+|+..++.+++++|++ .|++++.++..|.+|-
T Consensus 75 g~tpl~~A~~~~~~~~~~~Ll~-~ga~~n~~~~~~~~~~ 112 (115)
T 2l6b_A 75 GNTPEHLAKKNGHHEIVKLLDA-KGADVNARSWGSSHHH 112 (115)
T ss_dssp CCCTTHHHHTTTCHHHHHHHHT-TSSSHHHHSCCCC---
T ss_pred CCCHHHHHHHCCCHHHHHHHHH-cCCCCCcCCccccccc
Confidence 7888888888888888877777 5888888777777763
No 109
>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}
Probab=99.87 E-value=2.4e-22 Score=130.28 Aligned_cols=110 Identities=25% Similarity=0.269 Sum_probs=98.3
Q ss_pred cccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCC
Q 037875 18 HVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNG 97 (204)
Q Consensus 18 ~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~ 97 (204)
.+.+..|.||||+|+..|+.+++++|++.|++ ++..+..|.||||+|+..++ .+++++|++.++ +++.++..|
T Consensus 3 ~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~d~~g~t~L~~A~~~~~-~~~~~~Ll~~g~-~~~~~d~~g 75 (115)
T 2l6b_A 3 MWGSKDGNTPLHNAAKNGHAEEVKKLLSKGAD-----VNARSKDGNTPLHLAAKNGH-AEIVKLLLAKGA-DVNARSKDG 75 (115)
T ss_dssp -CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCC-----SSCCCSSSCCTTHHHHTTTC-HHHHHHHTTTTC-CTTCCCTTC
T ss_pred cccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCcCCCCCCHHHHHHHcCc-HHHHHHHHHcCC-CCcccCCCC
Confidence 35788999999999999999999999997765 88899999999999999999 999999999998 899999999
Q ss_pred CcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCCccHH
Q 037875 98 ETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVL 141 (204)
Q Consensus 98 ~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l 141 (204)
.||||+|+..++.+++++|+++|++++. ++..|.+|-
T Consensus 76 ~tpl~~A~~~~~~~~~~~Ll~~ga~~n~-------~~~~~~~~~ 112 (115)
T 2l6b_A 76 NTPEHLAKKNGHHEIVKLLDAKGADVNA-------RSWGSSHHH 112 (115)
T ss_dssp CCTTHHHHTTTCHHHHHHHHTTSSSHHH-------HSCCCC---
T ss_pred CCHHHHHHHCCCHHHHHHHHHcCCCCCc-------CCccccccc
Confidence 9999999999999999999999998776 567777764
No 110
>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1
Probab=99.86 E-value=4.8e-21 Score=142.65 Aligned_cols=169 Identities=18% Similarity=0.115 Sum_probs=132.5
Q ss_pred cccCCchHHHHHHhcCChHHHHHHHhhCchhh-------------hhhhc-------------ccccCCCcHHHHHHhcC
Q 037875 20 LTVHDDTVLHMATYFKRDDLALKLLDEIPELY-------------IHKMT-------------RQNKAGNTVLHATATSS 73 (204)
Q Consensus 20 ~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~-------------~~~~~-------------~~~~~g~~~l~~a~~~~ 73 (204)
.|..+.+.++++...|+....+++....+... ...+. .......++|+.|+..+
T Consensus 62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a~~~~ 141 (278)
T 1dcq_A 62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDMIARKDYITAKYMERRYARKKHADTAAKLHSLCEAVKTR 141 (278)
T ss_dssp TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCHHHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHHHHTT
T ss_pred cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCHHHHHHHHHHHHHHhhcccccccccchhhhhhhhHhhhc
Confidence 35567889999999998877666643221100 00000 00112346899999999
Q ss_pred CCHHHHHHHHhhCCCc-----cccccCCCCcHHHHHHHc---CCHHHHHHHHhcccCCCCCCCCccccCCCCccHHHHHH
Q 037875 74 RALPVADKLLRKAPGL-----LGMRNNNGETALFRSARY---GKADIFNFLAGKIADYDQPSKQPFLQRNDQSTVLHMAV 145 (204)
Q Consensus 74 ~~~~~~~~Ll~~~~~~-----~~~~~~~~~t~l~~a~~~---~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g~t~l~~a~ 145 (204)
+ .+.++.++..+... ++..+..|.||||+|+.. |+.+++++|+++|++++. +|..|+||||+|+
T Consensus 142 d-~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~-------~d~~g~TpLh~A~ 213 (278)
T 1dcq_A 142 D-IFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDK-------QTGKGSTALHYCC 213 (278)
T ss_dssp C-HHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTC-------CCTTCCCHHHHHH
T ss_pred c-cHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccc-------cCCCCCCHHHHHH
Confidence 9 89999999988731 344478899999999999 899999999999999887 5889999999999
Q ss_pred HhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhcc--CCcchhhhhhccchhhh
Q 037875 146 ISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSC--KPEAFKLKQERGFFKKL 197 (204)
Q Consensus 146 ~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~--~~~~~~~~~~~g~~~~~ 197 (204)
..|+.++++.|++ .|++++.+|..|.||||+|+. +.++.+.+++.|..+.-
T Consensus 214 ~~g~~~~v~~Ll~-~gad~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~ 266 (278)
T 1dcq_A 214 LTDNAECLKLLLR-GKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 266 (278)
T ss_dssp HTTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTTCCC
T ss_pred HcCCHHHHHHHHH-cCCCCCCccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCC
Confidence 9999999999999 799999999999999999985 45788888888876543
No 111
>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A
Probab=99.85 E-value=6.6e-21 Score=146.80 Aligned_cols=124 Identities=19% Similarity=0.190 Sum_probs=111.1
Q ss_pred cCCCcHHHHHHhc-CCCHHHHHHHHhhCCCcccccc--CCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCC
Q 037875 60 KAGNTVLHATATS-SRALPVADKLLRKAPGLLGMRN--NNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRND 136 (204)
Q Consensus 60 ~~g~~~l~~a~~~-~~~~~~~~~Ll~~~~~~~~~~~--~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~ 136 (204)
..+.++||.|+.. ++ .+++++|+..++ +++..+ ..|.||||+|+..|+.+++++|+++|++++. ++..
T Consensus 197 ~~~~t~L~~Aa~~~g~-~~~v~~LL~~Ga-dvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~-------~d~~ 267 (368)
T 3jue_A 197 LHPGALLFRASGHPPS-LPTMADALAHGA-DVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ-------ADSA 267 (368)
T ss_dssp CCHHHHHHHHTSSSCC-HHHHHHHHHTTC-CTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTT
T ss_pred CCCCcHHHHHHHccCC-HHHHHHHHHcCC-CCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCC-------CCCC
Confidence 4566899999999 88 999999999998 888887 8899999999999999999999999999886 6899
Q ss_pred CccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhccC--Ccchhhhhhccc
Q 037875 137 QSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLSCK--PEAFKLKQERGF 193 (204)
Q Consensus 137 g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~~~--~~~~~~~~~~g~ 193 (204)
|+||||+|+..|+.+++++|+. .|++++.+|..|.|||++|+.. .+++++++..+.
T Consensus 268 G~TpLh~A~~~g~~~~v~~LL~-~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~ 325 (368)
T 3jue_A 268 GRGPLHHATILGHTGLACLFLK-RGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM 325 (368)
T ss_dssp SCCHHHHHHHHTCHHHHHHHHH-TTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred CCCHHHHHHHcCcHHHHHHHHH-CcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence 9999999999999999999999 6999999999999999999844 467777665553
No 112
>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E*
Probab=99.84 E-value=2.2e-20 Score=149.68 Aligned_cols=114 Identities=20% Similarity=0.149 Sum_probs=102.1
Q ss_pred HHHHHHHhhhcccccc--------ccCCchHHHHHHh---cCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcC
Q 037875 5 VIEVCRKISDHALHVL--------TVHDDTVLHMATY---FKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSS 73 (204)
Q Consensus 5 ~~~~~~~l~~~~~~~~--------~~~~~~~L~~A~~---~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~ 73 (204)
-++.++.|+++|++++ +..|.||||+|+. .|+.+++++|++.|++ ++.+|..|.||||+|+..|
T Consensus 144 ~~~~v~~ll~~g~~~n~~~~~~~~~~~g~t~Lh~A~~~a~~g~~~~v~~Ll~~ga~-----vn~~d~~g~TpLh~A~~~g 218 (497)
T 3lvq_E 144 DLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGH-----LDAKAADGNTALHYAALYN 218 (497)
T ss_dssp CHHHHHHHHHTTCCSSSCBCCSSSCCSCBCHHHHHHHTCCTTTHHHHHHHHHHSCC-----TTCCCSSSCCHHHHHTTTT
T ss_pred CHHHHHHHHhhcccccCCCCCcccccccchHHHHHHHhcccccHHHHHHHHHcCCC-----CCccCCCCCcHHHHHHHcC
Confidence 3578899999998875 5689999999966 8999999999997776 8999999999999999999
Q ss_pred CCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCC
Q 037875 74 RALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQ 125 (204)
Q Consensus 74 ~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~ 125 (204)
+ .+++++|+++|+ +++.++..|.||||+|+..|+.+++++|+++|++++.
T Consensus 219 ~-~~~v~~Ll~~ga-~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~ 268 (497)
T 3lvq_E 219 Q-PDCLKLLLKGRA-LVGTVNEAGETALDIARKKHHKECEELLEQAQAGTFA 268 (497)
T ss_dssp C-HHHHHHHHHTCC-CCSCCCTTCCCHHHHHHHTTCHHHHHHHHHTCC----
T ss_pred C-HHHHHHHHHcCC-CCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhCCCCCC
Confidence 9 999999999998 8999999999999999999999999999999998664
No 113
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=7.7e-19 Score=112.84 Aligned_cols=90 Identities=19% Similarity=0.198 Sum_probs=43.0
Q ss_pred cccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCcHHHHHHHcCCHHHHHHHHhcccCCCCCCCCccccCCCC
Q 037875 58 QNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGETALFRSARYGKADIFNFLAGKIADYDQPSKQPFLQRNDQ 137 (204)
Q Consensus 58 ~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~g 137 (204)
.+.+|.||||+|+..++ .+++++|++.++ +++.++..|.||||+|+..|+.+++++|+++|++++. ++..|
T Consensus 20 ~~~~g~t~L~~A~~~g~-~~~v~~Ll~~g~-~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~-------~d~~g 90 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQ-DDEVRILMANGA-DVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXA-------QDKFG 90 (110)
T ss_dssp --CCHHHHHHHHHHHTC-HHHHHHHHHTTC-CTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTC-------CCTTS
T ss_pred cCCccchHHHHHHHcCC-HHHHHHHHHcCC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccc-------cccCC
Confidence 33444455555555544 445555544443 4444444455555555555555555555555444443 34445
Q ss_pred ccHHHHHHHhCCHHHHHHH
Q 037875 138 STVLHMAVISQHFELALEI 156 (204)
Q Consensus 138 ~t~l~~a~~~~~~~~~~~L 156 (204)
+||||+|+..|+.+++++|
T Consensus 91 ~tpl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 91 KTAFDISIDNGNEDLAEIL 109 (110)
T ss_dssp CCHHHHHHHHTCHHHHHHH
T ss_pred CcHHHHHHHcCCHHHHHHh
Confidence 5555555555555554443
No 114
>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A
Probab=99.79 E-value=1e-18 Score=112.25 Aligned_cols=90 Identities=24% Similarity=0.265 Sum_probs=83.2
Q ss_pred cccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHHHhhCCCccccccCCCCc
Q 037875 20 LTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKLLRKAPGLLGMRNNNGET 99 (204)
Q Consensus 20 ~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~Ll~~~~~~~~~~~~~~~t 99 (204)
.+.+|.|+||+|+..|+.+++++|++.|++ ++.++..|.||||+|+..++ .+++++|++.++ +++.++..|.|
T Consensus 20 ~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~-----i~~~d~~g~tpLh~A~~~~~-~~~v~~Ll~~ga-~~~~~d~~g~t 92 (110)
T 2zgd_A 20 MGSDLGKKLLEAARAGQDDEVRILMANGAD-----VAAKDKNGSTPLHLAARNGH-LEVVKLLLEAGA-DVXAQDKFGKT 92 (110)
T ss_dssp --CCHHHHHHHHHHHTCHHHHHHHHHTTCC-----TTCCCTTCCCHHHHHHHTTC-HHHHHHHHHTTC-CTTCCCTTSCC
T ss_pred cCCccchHHHHHHHcCCHHHHHHHHHcCCC-----CCccCCCCCCHHHHHHHcCC-HHHHHHHHHcCC-CccccccCCCc
Confidence 467899999999999999999999997766 88899999999999999999 999999999998 89999999999
Q ss_pred HHHHHHHcCCHHHHHHH
Q 037875 100 ALFRSARYGKADIFNFL 116 (204)
Q Consensus 100 ~l~~a~~~~~~~~~~~L 116 (204)
|||+|+..|+.+++++|
T Consensus 93 pl~~A~~~~~~~~~~~L 109 (110)
T 2zgd_A 93 AFDISIDNGNEDLAEIL 109 (110)
T ss_dssp HHHHHHHHTCHHHHHHH
T ss_pred HHHHHHHcCCHHHHHHh
Confidence 99999999999999876
No 115
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=64.73 E-value=21 Score=28.43 Aligned_cols=135 Identities=9% Similarity=0.059 Sum_probs=67.4
Q ss_pred HHHHHHHHhhhccccccccCCchHHHHHHh-cCC-------------hHHHHHHHhhCchhhhhhhcccccCCCcHHHHH
Q 037875 4 KVIEVCRKISDHALHVLTVHDDTVLHMATY-FKR-------------DDLALKLLDEIPELYIHKMTRQNKAGNTVLHAT 69 (204)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~L~~A~~-~~~-------------~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a 69 (204)
+.+++++.+.+.|..++... .+.|..++. .+. .++.+.+.+.|.. ++.... .+.+...
T Consensus 44 ~A~~lf~~M~~~Gv~pd~~t-yn~Li~~c~~~~~~~~~~~~~~l~~A~~lf~~M~~~G~~-----Pd~~ty--n~lI~~~ 115 (501)
T 4g26_A 44 EALRLYDEARRNGVQLSQYH-YNVLLYVCSLAEAATESSPNPGLSRGFDIFKQMIVDKVV-----PNEATF--TNGARLA 115 (501)
T ss_dssp HHHHHHHHHHHHTCCCCHHH-HHHHHHHHTTCCCCSSSSCCHHHHHHHHHHHHHHHTTCC-----CCHHHH--HHHHHHH
T ss_pred HHHHHHHHHHHcCCCCCHhH-HHHHHHHHHhCCchhhhhhcchHHHHHHHHHHHHHhCCC-----CCHHHH--HHHHHHH
Confidence 45667777777776543332 344444443 222 1233444443332 222211 2456666
Q ss_pred HhcCCCHHHHHHHH----hhCCCccccccCCCCcH-HHHHHHcCCHHHHHH----HHhcccCCCCCCCCccccCCCCccH
Q 037875 70 ATSSRALPVADKLL----RKAPGLLGMRNNNGETA-LFRSARYGKADIFNF----LAGKIADYDQPSKQPFLQRNDQSTV 140 (204)
Q Consensus 70 ~~~~~~~~~~~~Ll----~~~~~~~~~~~~~~~t~-l~~a~~~~~~~~~~~----L~~~~~~~~~~~~~~~~~~~~g~t~ 140 (204)
+..|. .+-+..++ ..|. .++. .-.+. +...++.|..+-+.. +.+.|..++. ..-.+.
T Consensus 116 ~~~g~-~~~A~~l~~~M~~~g~-~Pd~---~tyn~lI~~~~~~g~~~~A~~l~~~M~~~G~~Pd~---------~ty~~L 181 (501)
T 4g26_A 116 VAKDD-PEMAFDMVKQMKAFGI-QPRL---RSYGPALFGFCRKGDADKAYEVDAHMVESEVVPEE---------PELAAL 181 (501)
T ss_dssp HHHTC-HHHHHHHHHHHHHTTC-CCCH---HHHHHHHHHHHHTTCHHHHHHHHHHHHHTTCCCCH---------HHHHHH
T ss_pred HhcCC-HHHHHHHHHHHHHcCC-CCcc---ceehHHHHHHHHCCCHHHHHHHHHHHHhcCCCCCH---------HHHHHH
Confidence 77777 55433333 3332 2222 22333 345567787654443 4444554332 123445
Q ss_pred HHHHHHhCCHHHHHHHHHHh
Q 037875 141 LHMAVISQHFELALEIAKEY 160 (204)
Q Consensus 141 l~~a~~~~~~~~~~~Ll~~~ 160 (204)
+...++.|..+-+..++.+.
T Consensus 182 i~~~~~~g~~d~A~~ll~~M 201 (501)
T 4g26_A 182 LKVSMDTKNADKVYKTLQRL 201 (501)
T ss_dssp HHHHHHTTCHHHHHHHHHHH
T ss_pred HHHHhhCCCHHHHHHHHHHH
Confidence 66777888888887777753
No 116
>1gp8_A Protein (scaffolding protein); coat protein-binding domain, helix- loop-helix motif, viral protein; NMR {Enterobacteria phage P22} SCOP: j.58.1.1 PDB: 2gp8_A
Probab=45.83 E-value=18 Score=17.48 Aligned_cols=18 Identities=17% Similarity=-0.038 Sum_probs=14.3
Q ss_pred HHHHHhcCChHHHHHHHh
Q 037875 28 LHMATYFKRDDLALKLLD 45 (204)
Q Consensus 28 L~~A~~~~~~~~v~~Ll~ 45 (204)
+.+||..|+.+.++.|-.
T Consensus 17 iyvA~seGd~etv~~Le~ 34 (40)
T 1gp8_A 17 MDAAASKGDVETYRKLKA 34 (40)
T ss_dssp HHHHHTTSCHHHHHHHHH
T ss_pred HHHHHhcCCHHHHHHHHH
Confidence 567888899988887755
No 117
>4g26_A Pentatricopeptide repeat-containing protein AT2G3 mitochondrial; metallonuclease, prorp, ribonuclease, PIN, tRNA processing, NYN domain; 1.75A {Arabidopsis thaliana} PDB: 4g23_A* 4g25_A 4g24_A
Probab=41.07 E-value=23 Score=28.20 Aligned_cols=106 Identities=8% Similarity=0.007 Sum_probs=56.1
Q ss_pred HHHHHHHHhhhccccccccCCchHHHHHHhcCChHHHHHHHhhCchhhhhhhcccccCCCcHHHHHHhcCCCHHHHHHH-
Q 037875 4 KVIEVCRKISDHALHVLTVHDDTVLHMATYFKRDDLALKLLDEIPELYIHKMTRQNKAGNTVLHATATSSRALPVADKL- 82 (204)
Q Consensus 4 ~~~~~~~~l~~~~~~~~~~~~~~~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~~L- 82 (204)
...++++.+.+.|..++...-.+.+...+..|+.+.+..+++.... .|..++.... .+.+...+..|. .+-+..+
T Consensus 88 ~A~~lf~~M~~~G~~Pd~~tyn~lI~~~~~~g~~~~A~~l~~~M~~-~g~~Pd~~ty--n~lI~~~~~~g~-~~~A~~l~ 163 (501)
T 4g26_A 88 RGFDIFKQMIVDKVVPNEATFTNGARLAVAKDDPEMAFDMVKQMKA-FGIQPRLRSY--GPALFGFCRKGD-ADKAYEVD 163 (501)
T ss_dssp HHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHTCHHHHHHHHHHHHH-TTCCCCHHHH--HHHHHHHHHTTC-HHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCHHHHHHHHHHHHhcCCHHHHHHHHHHHHH-cCCCCcccee--hHHHHHHHHCCC-HHHHHHHH
Confidence 3566777777777765544445667788888998877777663222 1212222211 234555667776 4443333
Q ss_pred ---HhhCCCccccccCCCCcHH-HHHHHcCCHHHHHHHH
Q 037875 83 ---LRKAPGLLGMRNNNGETAL-FRSARYGKADIFNFLA 117 (204)
Q Consensus 83 ---l~~~~~~~~~~~~~~~t~l-~~a~~~~~~~~~~~L~ 117 (204)
...|. .++. .-.+.| ...+..|..+-+..++
T Consensus 164 ~~M~~~G~-~Pd~---~ty~~Li~~~~~~g~~d~A~~ll 198 (501)
T 4g26_A 164 AHMVESEV-VPEE---PELAALLKVSMDTKNADKVYKTL 198 (501)
T ss_dssp HHHHHTTC-CCCH---HHHHHHHHHHHHTTCHHHHHHHH
T ss_pred HHHHhcCC-CCCH---HHHHHHHHHHhhCCCHHHHHHHH
Confidence 33443 2222 122333 4456677766544444
No 118
>3zrh_A Ubiquitin thioesterase zranb1; hydrolase, deubiquitinating enzyme, WNT signaling, ovarian T domain; 2.23A {Homo sapiens}
Probab=39.05 E-value=84 Score=24.47 Aligned_cols=54 Identities=13% Similarity=0.029 Sum_probs=38.0
Q ss_pred HHhcCChHHHHHHHhhCchhhh-------hhhccc--ccCCCcHHHHHHhcCCCHHHHHHHHhh
Q 037875 31 ATYFKRDDLALKLLDEIPELYI-------HKMTRQ--NKAGNTVLHATATSSRALPVADKLLRK 85 (204)
Q Consensus 31 A~~~~~~~~v~~Ll~~g~~~~~-------~~~~~~--~~~g~~~l~~a~~~~~~~~~~~~Ll~~ 85 (204)
.+..|+...|+.-+..|.++.. ..+|.. ...|.|.+|+|+...+ .+++..|+..
T Consensus 29 gv~e~~~~~ve~y~~~gg~~~r~lt~~e~~lln~~~af~~g~tlvhlair~~r-~~~l~~ll~~ 91 (454)
T 3zrh_A 29 GVVEGDLAAIEAYKSSGGDIARQLTADEVRLLNRPSAFDVGYTLVHLAIRFQR-QDMLAILLTE 91 (454)
T ss_dssp HHHHTCHHHHHHHHTTTCCTTCCCCHHHHHHHCCTTTCCTTCCHHHHHHHTTC-HHHHHHHHHH
T ss_pred HHHcCChhHHHHHHhcCCchhcccCHHHHHHhCCCcccccCchhhhhhhhhhh-hhHHHHhhhc
Confidence 3446888888888887766531 122222 3468999999999998 7888888763
No 119
>3qil_A Clathrin heavy chain 1; clathrin trimerization domain, endocytosis, structural prote; 3.92A {Bos taurus}
Probab=32.85 E-value=14 Score=23.23 Aligned_cols=44 Identities=16% Similarity=0.083 Sum_probs=27.6
Q ss_pred cCCCCccHHHHHHHhCCHHHHHHHHHHhchhhcccCCCCCCHhHHhc
Q 037875 133 QRNDQSTVLHMAVISQHFELALEIAKEYKYLIGEKDMDGMTALQLLS 179 (204)
Q Consensus 133 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~~g~~~~~~~~~g~t~l~~a~ 179 (204)
+|.....++-.|+..++.+++..||. +-.+.. +.+...+.-++|
T Consensus 31 kDkLykDAietAa~S~d~elaEeLL~-yFVe~g--~kEcF~A~LytC 74 (125)
T 3qil_A 31 KDSLYKDAMQYASESKDTELAEELLQ-WFLQEE--KRECFGACLFTC 74 (125)
T ss_dssp CCCCSSHHHHTTTSSCCSHHHHHHHH-HHTTSC--SHHHHHHHHHHH
T ss_pred hcccHHHHHHHHHHcCCHHHHHHHHH-HHHHcC--chHHHHHHHHHH
Confidence 46666678888888888888888877 333333 233344444444
Done!