Query 037878
Match_columns 2280
No_of_seqs 1410 out of 9781
Neff 8.5
Searched_HMMs 46136
Date Fri Mar 29 05:17:51 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037878.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/037878hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02353 NRPS_term_dom non-ri 100.0 2.5E-79 5.3E-84 811.2 63.0 613 1252-2279 51-686 (695)
2 PRK05691 peptide synthase; Val 100.0 1.9E-69 4.1E-74 859.9 58.8 607 459-1160 3710-4318(4334)
3 PRK12467 peptide synthase; Pro 100.0 1.8E-69 3.8E-74 851.1 55.4 587 461-1152 3087-3674(3956)
4 PRK12467 peptide synthase; Pro 100.0 8.9E-69 1.9E-73 843.2 57.6 620 469-1196 512-1132(3956)
5 PRK12316 peptide synthase; Pro 100.0 2.1E-68 4.6E-73 852.7 58.4 623 461-1196 1995-2618(5163)
6 TIGR03443 alpha_am_amid L-amin 100.0 2.4E-68 5.1E-73 791.6 53.3 617 469-1154 236-921 (1389)
7 PRK05691 peptide synthase; Val 100.0 8.7E-67 1.9E-71 829.5 67.0 677 461-1196 1-691 (4334)
8 PRK12316 peptide synthase; Pro 100.0 9.6E-67 2.1E-71 833.7 55.7 604 461-1160 4543-5149(5163)
9 PRK10252 entF enterobactin syn 100.0 6.8E-66 1.5E-70 763.8 58.5 588 469-1153 458-1048(1296)
10 PRK06060 acyl-CoA synthetase; 100.0 1.5E-65 3.3E-70 709.1 56.2 609 470-1155 5-620 (705)
11 KOG0047 Catalase [Inorganic io 100.0 8.1E-68 1.8E-72 597.1 13.4 295 1710-2044 64-376 (505)
12 COG0753 KatE Catalase [Inorgan 100.0 5.8E-66 1.3E-70 600.0 18.3 300 1710-2046 56-373 (496)
13 COG0365 Acs Acyl-coenzyme A sy 100.0 2.5E-62 5.5E-67 618.5 47.8 497 474-1032 14-522 (528)
14 KOG1177 Long chain fatty acid 100.0 2E-62 4.3E-67 569.0 39.4 504 467-1031 48-586 (596)
15 cd08156 catalase_clade_3 Clade 100.0 7.8E-63 1.7E-67 599.1 20.3 296 1711-2043 1-314 (429)
16 KOG1176 Acyl-CoA synthetase [L 100.0 4E-60 8.6E-65 602.6 44.9 485 487-1033 33-533 (537)
17 COG0318 CaiC Acyl-CoA syntheta 100.0 1.8E-59 3.9E-64 624.1 50.4 502 467-1032 9-527 (534)
18 cd08155 catalase_clade_2 Clade 100.0 6.5E-62 1.4E-66 590.3 19.7 298 1710-2044 3-323 (443)
19 cd08154 catalase_clade_1 Clade 100.0 1E-61 2.3E-66 590.9 19.7 298 1710-2044 42-357 (469)
20 PLN02609 catalase 100.0 1.1E-61 2.3E-66 590.7 19.4 298 1710-2044 57-372 (492)
21 PLN02654 acetate-CoA ligase 100.0 2.7E-58 5.9E-63 629.1 53.6 513 472-1031 91-639 (666)
22 PRK07769 long-chain-fatty-acid 100.0 4.8E-58 1E-62 627.5 54.1 549 465-1036 17-618 (631)
23 cd00328 catalase Catalase heme 100.0 2.9E-61 6.2E-66 587.6 19.3 291 1711-2036 1-309 (433)
24 PTZ00237 acetyl-CoA synthetase 100.0 6.2E-58 1.3E-62 623.6 51.1 517 470-1032 60-623 (647)
25 cd08157 catalase_fungal Fungal 100.0 2.2E-60 4.7E-65 588.6 20.9 298 1710-2044 16-332 (451)
26 TIGR02316 propion_prpE propion 100.0 4.9E-57 1.1E-61 616.1 53.7 514 471-1031 54-603 (628)
27 PRK12476 putative fatty-acid-- 100.0 6.6E-57 1.4E-61 613.5 52.2 548 452-1035 17-609 (612)
28 TIGR02188 Ac_CoA_lig_AcsA acet 100.0 9.2E-57 2E-61 614.7 53.8 513 470-1031 58-601 (625)
29 PRK00174 acetyl-CoA synthetase 100.0 1.4E-56 3.1E-61 613.7 54.6 511 472-1031 70-609 (637)
30 PRK11249 katE hydroperoxidase 100.0 8.5E-60 1.8E-64 603.3 20.7 298 1710-2044 117-437 (752)
31 PRK06334 long chain fatty acid 100.0 1.8E-56 4E-61 599.2 48.8 494 468-1030 18-533 (539)
32 PRK05851 long-chain-fatty-acid 100.0 7.8E-56 1.7E-60 592.6 51.6 511 471-1032 4-522 (525)
33 PF00199 Catalase: Catalase; 100.0 1.1E-58 2.3E-63 575.3 20.0 297 1710-2043 40-354 (384)
34 PRK03584 acetoacetyl-CoA synth 100.0 2.1E-55 4.6E-60 603.5 53.1 500 484-1033 97-626 (655)
35 PLN02614 long-chain acyl-CoA s 100.0 5.6E-56 1.2E-60 604.8 47.0 442 465-950 41-554 (666)
36 PLN02736 long-chain acyl-CoA s 100.0 1.6E-55 3.5E-60 603.0 49.8 512 466-1034 41-643 (651)
37 PRK07529 AMP-binding domain pr 100.0 2.9E-55 6.3E-60 597.8 51.0 505 469-1034 25-572 (632)
38 PRK10524 prpE propionyl-CoA sy 100.0 5.4E-55 1.2E-59 597.7 53.2 514 471-1031 55-604 (629)
39 cd08151 AOS Allene oxide synth 100.0 1.8E-57 3.8E-62 552.4 24.8 321 1690-2018 3-328 (328)
40 TIGR01217 ac_ac_CoA_syn acetoa 100.0 5E-55 1.1E-59 596.3 50.8 495 485-1031 98-625 (652)
41 PLN03052 acetate--CoA ligase; 100.0 4.6E-55 9.9E-60 597.3 50.4 509 473-1032 179-721 (728)
42 PLN02860 o-succinylbenzoate-Co 100.0 5.7E-55 1.2E-59 589.5 48.1 502 468-1033 6-555 (563)
43 PLN02861 long-chain-fatty-acid 100.0 4.3E-55 9.2E-60 597.1 47.2 527 451-1035 26-649 (660)
44 PRK04319 acetyl-CoA synthetase 100.0 1.2E-54 2.6E-59 587.7 50.5 503 470-1031 44-558 (570)
45 PRK09274 peptide synthase; Pro 100.0 1.5E-54 3.3E-59 585.4 50.9 515 469-1032 6-548 (552)
46 PRK07788 acyl-CoA synthetase; 100.0 1.6E-54 3.4E-59 584.5 46.0 486 470-1028 50-547 (549)
47 PRK05857 acyl-CoA synthetase; 100.0 5.9E-54 1.3E-58 576.5 46.8 504 470-1033 15-532 (540)
48 COG1021 EntE Peptide arylation 100.0 3.7E-55 7.9E-60 496.4 29.3 495 468-1032 27-538 (542)
49 PLN02574 4-coumarate--CoA liga 100.0 1E-53 2.2E-58 576.8 48.8 485 484-1033 52-555 (560)
50 PLN02246 4-coumarate--CoA liga 100.0 2.1E-53 4.6E-58 572.0 51.2 506 464-1032 18-536 (537)
51 PTZ00342 acyl-CoA synthetase; 100.0 2.4E-53 5.3E-58 574.7 49.8 444 463-949 55-627 (746)
52 PRK05850 acyl-CoA synthetase; 100.0 4.5E-53 9.7E-58 574.1 52.7 528 470-1036 2-572 (578)
53 PRK13295 cyclohexanecarboxylat 100.0 4.5E-53 9.7E-58 569.8 51.2 500 469-1032 24-544 (547)
54 PRK05852 acyl-CoA synthetase; 100.0 7.7E-53 1.7E-57 566.2 53.1 509 465-1032 12-532 (534)
55 PRK09192 acyl-CoA synthetase; 100.0 7.4E-53 1.6E-57 570.9 53.2 536 463-1038 15-572 (579)
56 PRK08314 long-chain-fatty-acid 100.0 6.6E-53 1.4E-57 569.4 50.3 498 468-1031 9-541 (546)
57 PRK08043 bifunctional acyl-[ac 100.0 3.5E-53 7.7E-58 585.9 47.0 495 468-1032 203-713 (718)
58 PRK05677 long-chain-fatty-acid 100.0 1.6E-52 3.4E-57 566.0 50.9 494 469-1032 24-557 (562)
59 PLN02387 long-chain-fatty-acid 100.0 5.1E-53 1.1E-57 578.6 46.3 465 450-950 40-593 (696)
60 PTZ00216 acyl-CoA synthetase; 100.0 6.8E-53 1.5E-57 579.3 45.3 432 465-940 65-587 (700)
61 COG1022 FAA1 Long-chain acyl-C 100.0 6.7E-53 1.5E-57 539.1 41.7 422 468-948 15-505 (613)
62 PRK13382 acyl-CoA synthetase; 100.0 1.8E-52 3.9E-57 561.8 45.8 486 469-1027 43-535 (537)
63 PRK06839 acyl-CoA synthetase; 100.0 9.5E-52 2.1E-56 551.8 50.3 487 470-1031 3-494 (496)
64 PRK08315 AMP-binding domain pr 100.0 1.8E-51 3.9E-56 557.1 51.0 503 467-1032 14-551 (559)
65 PRK08180 feruloyl-CoA synthase 100.0 9.7E-52 2.1E-56 562.5 47.7 516 468-1036 38-600 (614)
66 PLN02430 long-chain-fatty-acid 100.0 1.5E-51 3.3E-56 560.7 49.5 512 466-1034 39-648 (660)
67 PRK08633 2-acyl-glycerophospho 100.0 6.2E-52 1.3E-56 609.2 49.2 511 466-1031 612-1142(1146)
68 PRK06145 acyl-CoA synthetase; 100.0 2.2E-51 4.7E-56 548.1 49.6 489 469-1030 2-495 (497)
69 TIGR03208 cyc_hxne_CoA_lg cycl 100.0 2.9E-51 6.2E-56 551.5 50.4 494 469-1027 22-537 (538)
70 PLN02330 4-coumarate--CoA liga 100.0 2E-51 4.3E-56 553.7 48.5 503 465-1032 24-541 (546)
71 PRK07638 acyl-CoA synthetase; 100.0 2.8E-51 6E-56 545.1 49.2 480 469-1032 1-481 (487)
72 TIGR01734 D-ala-DACP-lig D-ala 100.0 3.1E-51 6.8E-56 547.5 50.0 498 471-1030 2-500 (502)
73 PRK03640 O-succinylbenzoic aci 100.0 2.4E-51 5.2E-56 545.8 48.5 479 469-1031 2-481 (483)
74 PRK13388 acyl-CoA synthetase; 100.0 3.3E-51 7.2E-56 549.5 49.9 487 469-1033 3-507 (540)
75 PRK06155 crotonobetaine/carnit 100.0 5.1E-51 1.1E-55 547.9 51.4 487 468-1030 20-522 (542)
76 PRK05605 long-chain-fatty-acid 100.0 3.2E-51 7E-56 555.3 49.5 495 469-1032 32-569 (573)
77 PRK08279 long-chain-acyl-CoA s 100.0 1.7E-51 3.6E-56 560.5 46.1 499 468-1032 36-564 (600)
78 PRK12583 acyl-CoA synthetase; 100.0 6.2E-51 1.3E-55 551.9 51.3 500 469-1032 18-552 (558)
79 PRK07470 acyl-CoA synthetase; 100.0 4.8E-51 1E-55 548.6 49.5 504 468-1035 6-521 (528)
80 TIGR02275 DHB_AMP_lig 2,3-dihy 100.0 4.4E-51 9.4E-56 548.2 46.7 489 468-1026 22-526 (527)
81 PRK07656 long-chain-fatty-acid 100.0 7.8E-51 1.7E-55 545.6 48.0 493 468-1028 4-512 (513)
82 PRK05620 long-chain-fatty-acid 100.0 7.6E-51 1.6E-55 551.3 48.3 519 469-1039 10-564 (576)
83 PRK07768 long-chain-fatty-acid 100.0 2.7E-50 5.8E-55 543.3 52.3 522 470-1031 3-544 (545)
84 PRK08316 acyl-CoA synthetase; 100.0 1.7E-50 3.6E-55 543.7 50.2 497 468-1033 10-520 (523)
85 PRK07867 acyl-CoA synthetase; 100.0 1.8E-50 3.9E-55 540.6 50.2 492 467-1035 3-510 (529)
86 PRK07514 malonyl-CoA synthase; 100.0 1.8E-50 3.9E-55 540.4 50.2 492 469-1032 3-501 (504)
87 PLN03102 acyl-activating enzym 100.0 9.2E-51 2E-55 549.0 47.7 499 470-1032 15-554 (579)
88 PRK12492 long-chain-fatty-acid 100.0 1.3E-50 2.9E-55 547.2 48.7 494 468-1029 23-561 (562)
89 PRK09088 acyl-CoA synthetase; 100.0 2.2E-50 4.7E-55 536.9 48.9 475 484-1033 8-486 (488)
90 PRK12582 acyl-CoA synthetase; 100.0 3.4E-51 7.3E-56 558.2 41.6 527 466-1036 46-611 (624)
91 cd08153 srpA_like Catalase-lik 100.0 1E-52 2.2E-57 506.6 22.7 270 1711-2018 11-295 (295)
92 PRK06087 short chain acyl-CoA 100.0 2.1E-50 4.5E-55 544.6 47.5 499 469-1033 23-537 (547)
93 PRK07786 long-chain-fatty-acid 100.0 2.2E-50 4.7E-55 543.1 47.4 500 468-1034 16-526 (542)
94 PRK10946 entE enterobactin syn 100.0 2.5E-50 5.5E-55 541.3 47.5 492 469-1032 25-532 (536)
95 KOG1256 Long-chain acyl-CoA sy 100.0 7.5E-51 1.6E-55 507.8 38.5 437 466-948 72-583 (691)
96 PRK13390 acyl-CoA synthetase; 100.0 1.8E-50 3.9E-55 539.4 45.0 480 484-1026 10-500 (501)
97 PRK07008 long-chain-fatty-acid 100.0 4E-50 8.6E-55 539.8 48.5 506 470-1035 11-536 (539)
98 PRK08008 caiC putative crotono 100.0 4.1E-50 8.9E-55 538.4 47.5 494 467-1026 5-516 (517)
99 PRK06164 acyl-CoA synthetase; 100.0 1.4E-49 3E-54 536.0 52.7 497 464-1031 5-531 (540)
100 KOG1175 Acyl-CoA synthetase [L 100.0 3.4E-50 7.3E-55 505.9 43.2 501 484-1033 78-603 (626)
101 PRK04813 D-alanine--poly(phosp 100.0 1.3E-49 2.9E-54 532.2 51.8 500 469-1031 2-502 (503)
102 PRK06187 long-chain-fatty-acid 100.0 1.6E-49 3.4E-54 534.2 50.8 499 468-1033 5-520 (521)
103 TIGR03098 ligase_PEP_1 acyl-Co 100.0 1.5E-49 3.2E-54 533.4 48.5 494 471-1028 2-514 (515)
104 PRK07787 acyl-CoA synthetase; 100.0 9.8E-50 2.1E-54 527.4 46.0 454 484-1028 13-469 (471)
105 PRK06188 acyl-CoA synthetase; 100.0 2.3E-49 4.9E-54 531.9 49.8 500 468-1035 11-520 (524)
106 PRK06710 long-chain-fatty-acid 100.0 1.9E-49 4E-54 537.0 48.6 494 469-1032 24-555 (563)
107 PLN03051 acyl-activating enzym 100.0 3.3E-50 7.3E-55 534.4 40.3 453 537-1032 1-491 (499)
108 PRK07059 Long-chain-fatty-acid 100.0 2.4E-49 5.3E-54 535.1 47.8 493 468-1029 22-555 (557)
109 PRK08751 putative long-chain f 100.0 2.5E-49 5.4E-54 535.7 47.1 492 469-1029 25-557 (560)
110 PRK07445 O-succinylbenzoic aci 100.0 1.6E-49 3.5E-54 518.7 43.0 428 502-1033 19-448 (452)
111 TIGR02353 NRPS_term_dom non-ri 100.0 4.5E-49 9.7E-54 522.9 47.5 383 1255-1672 293-695 (695)
112 PRK06178 acyl-CoA synthetase; 100.0 1.2E-48 2.6E-53 529.5 51.3 499 469-1032 33-565 (567)
113 cd08150 catalase_like Catalase 100.0 3.7E-51 8E-56 490.8 23.6 273 1713-2018 1-283 (283)
114 PLN02479 acetate-CoA ligase 100.0 9.5E-49 2.1E-53 529.4 49.3 501 470-1032 21-558 (567)
115 TIGR03205 pimA dicarboxylate-- 100.0 7.9E-49 1.7E-53 528.1 47.8 490 468-1026 20-540 (541)
116 PRK06018 putative acyl-CoA syn 100.0 9.2E-49 2E-53 527.3 48.4 506 468-1033 9-535 (542)
117 PRK06814 acylglycerophosphoeth 100.0 5.5E-49 1.2E-53 574.7 48.5 489 468-1032 630-1132(1140)
118 PRK08974 long-chain-fatty-acid 100.0 2.5E-48 5.3E-53 525.7 50.6 496 468-1033 22-556 (560)
119 TIGR02262 benz_CoA_lig benzoat 100.0 1.4E-48 3.1E-53 522.0 47.4 491 471-1028 6-507 (508)
120 PRK07868 acyl-CoA synthetase; 100.0 1.6E-48 3.5E-53 550.1 49.1 479 466-1029 444-955 (994)
121 KOG1180 Acyl-CoA synthetase [L 100.0 3.9E-49 8.5E-54 465.8 33.5 460 448-948 20-571 (678)
122 PRK13383 acyl-CoA synthetase; 100.0 6.3E-48 1.4E-52 516.3 47.8 477 468-1026 34-514 (516)
123 PRK08276 long-chain-fatty-acid 100.0 4E-48 8.6E-53 517.2 45.3 475 501-1033 10-497 (502)
124 PRK13391 acyl-CoA synthetase; 100.0 9.3E-48 2E-52 514.3 47.3 486 484-1032 10-509 (511)
125 cd08152 y4iL_like Catalase-lik 100.0 4.6E-50 1E-54 485.0 20.1 271 1713-2019 3-305 (305)
126 PRK07798 acyl-CoA synthetase; 100.0 3.8E-47 8.3E-52 512.5 50.4 496 470-1031 4-531 (533)
127 PRK12406 long-chain-fatty-acid 100.0 2.8E-47 6E-52 509.7 47.5 469 501-1031 10-502 (509)
128 PRK09029 O-succinylbenzoic aci 100.0 1.9E-47 4E-52 504.0 44.8 444 476-1032 10-453 (458)
129 PRK08162 acyl-CoA synthetase; 100.0 1.1E-46 2.5E-51 508.3 50.1 500 469-1031 18-538 (545)
130 TIGR01923 menE O-succinylbenzo 100.0 7.1E-46 1.5E-50 486.6 42.7 434 504-1025 1-435 (436)
131 PRK08308 acyl-CoA synthetase; 100.0 1.5E-45 3.2E-50 478.8 45.1 399 501-1025 7-406 (414)
132 PF00501 AMP-binding: AMP-bind 100.0 1.8E-45 3.8E-50 479.9 32.5 403 475-919 1-417 (417)
133 TIGR01733 AA-adenyl-dom amino 100.0 6.8E-43 1.5E-47 454.3 40.1 402 504-940 1-405 (408)
134 COG1020 EntF Non-ribosomal pep 100.0 1.7E-40 3.8E-45 456.4 39.8 419 465-936 223-642 (642)
135 KOG1179 Very long-chain acyl-C 100.0 7.7E-40 1.7E-44 390.0 36.0 497 468-1029 76-610 (649)
136 PRK07824 O-succinylbenzoic aci 100.0 2.5E-37 5.4E-42 393.7 36.1 324 631-1032 31-357 (358)
137 PTZ00297 pantothenate kinase; 100.0 2E-35 4.3E-40 412.1 44.2 404 465-949 423-893 (1452)
138 KOG1178 Non-ribosomal peptide 100.0 5.7E-35 1.2E-39 384.8 30.9 609 471-1152 38-667 (1032)
139 TIGR02372 4_coum_CoA_lig 4-cou 100.0 8.8E-30 1.9E-34 321.4 31.0 289 635-1022 95-386 (386)
140 KOG3628 Predicted AMP-binding 100.0 1.7E-27 3.6E-32 299.8 44.1 538 469-1036 770-1355(1363)
141 TIGR02155 PA_CoA_ligase phenyl 100.0 4.5E-28 9.8E-33 314.8 33.0 329 633-1024 73-418 (422)
142 TIGR03335 F390_ftsA coenzyme F 99.9 2.3E-23 4.9E-28 270.5 33.2 260 632-938 83-355 (445)
143 COG2907 Predicted NAD/FAD-bind 99.9 6.7E-24 1.5E-28 239.6 21.1 351 20-423 7-418 (447)
144 COG1232 HemY Protoporphyrinoge 99.8 1E-18 2.2E-23 217.2 24.6 205 179-407 205-423 (444)
145 TIGR03089 conserved hypothetic 99.8 7.3E-19 1.6E-23 205.9 20.9 211 475-730 2-227 (227)
146 COG1541 PaaK Coenzyme F390 syn 99.8 1.6E-17 3.5E-22 202.3 29.9 325 633-1023 88-430 (438)
147 PLN02576 protoporphyrinogen ox 99.8 7.6E-18 1.6E-22 223.8 29.4 212 179-408 229-465 (496)
148 KOG3628 Predicted AMP-binding 99.8 9.9E-18 2.2E-22 212.7 27.4 526 470-1036 95-708 (1363)
149 TIGR00562 proto_IX_ox protopor 99.8 3.5E-17 7.6E-22 215.9 29.6 207 181-408 217-438 (462)
150 PRK12416 protoporphyrinogen ox 99.8 5.5E-17 1.2E-21 213.5 26.9 210 179-411 216-442 (463)
151 COG1231 Monoamine oxidase [Ami 99.7 2.3E-17 4.9E-22 198.5 19.4 203 179-404 199-418 (450)
152 PRK11883 protoporphyrinogen ox 99.7 5.4E-17 1.2E-21 213.9 24.6 208 178-408 210-430 (451)
153 PRK12461 UDP-N-acetylglucosami 99.7 2.4E-17 5.1E-22 193.9 18.7 111 1574-1700 102-218 (255)
154 COG1044 LpxD UDP-3-O-[3-hydrox 99.7 1.4E-17 3.1E-22 192.7 15.2 97 1574-1672 203-308 (338)
155 PRK05289 UDP-N-acetylglucosami 99.7 4.9E-17 1.1E-21 193.8 18.4 86 1574-1674 106-191 (262)
156 KOG0685 Flavin-containing amin 99.7 4.4E-17 9.5E-22 194.9 16.8 329 20-361 20-404 (498)
157 PLN02529 lysine-specific histo 99.7 6.1E-16 1.3E-20 204.9 25.6 91 178-275 346-438 (738)
158 COG0663 PaaY Carbonic anhydras 99.7 1.9E-16 4.2E-21 167.8 15.1 118 1575-1705 52-171 (176)
159 PRK07208 hypothetical protein; 99.7 1.6E-15 3.4E-20 200.8 27.7 210 180-405 209-434 (479)
160 PLN02268 probable polyamine ox 99.7 2.7E-16 5.9E-21 205.4 19.7 201 182-410 194-411 (435)
161 TIGR01853 lipid_A_lpxD UDP-3-O 99.7 2.5E-16 5.4E-21 192.3 17.5 97 1574-1672 196-301 (324)
162 PRK00892 lpxD UDP-3-O-[3-hydro 99.7 3.3E-16 7.1E-21 195.1 18.8 53 1619-1673 258-311 (343)
163 PLN03000 amine oxidase 99.7 2.4E-15 5.3E-20 198.6 25.8 210 178-410 370-600 (881)
164 KOG0029 Amine oxidase [Seconda 99.7 4.7E-16 1E-20 199.0 18.4 90 181-276 211-303 (501)
165 PLN02328 lysine-specific histo 99.7 3.1E-15 6.6E-20 198.6 26.0 92 178-276 426-519 (808)
166 TIGR01852 lipid_A_lpxA acyl-[a 99.7 1.3E-15 2.9E-20 181.8 20.6 85 1574-1673 102-186 (254)
167 KOG1276 Protoporphyrinogen oxi 99.7 3.3E-15 7.1E-20 175.4 22.6 211 179-407 239-470 (491)
168 cd03351 LbH_UDP-GlcNAc_AT UDP- 99.7 1.2E-15 2.7E-20 182.1 19.5 84 1574-1672 103-186 (254)
169 PLN02676 polyamine oxidase 99.7 1.3E-15 2.8E-20 198.4 20.3 88 185-276 220-318 (487)
170 PLN02568 polyamine oxidase 99.7 2E-15 4.4E-20 197.5 20.0 93 179-275 232-331 (539)
171 COG1207 GlmU N-acetylglucosami 99.6 1.1E-15 2.4E-20 179.7 13.6 95 1574-1671 345-444 (460)
172 cd03352 LbH_LpxD UDP-3-O-acyl- 99.6 6.3E-15 1.4E-19 171.2 19.0 51 1621-1673 149-199 (205)
173 COG1043 LpxA Acyl-[acyl carrie 99.6 6.1E-15 1.3E-19 160.4 13.7 84 1574-1672 107-190 (260)
174 PLN02976 amine oxidase 99.6 6.3E-14 1.4E-18 188.1 24.9 93 178-276 925-1029(1713)
175 PRK07233 hypothetical protein; 99.6 1.7E-13 3.8E-18 179.8 26.7 351 23-405 1-403 (434)
176 cd03353 LbH_GlmU_C N-acetyl-gl 99.6 5.2E-14 1.1E-18 161.7 18.2 89 1574-1671 103-191 (193)
177 PRK10502 putative acyl transfe 99.5 1.5E-14 3.3E-19 162.8 11.4 123 2151-2274 16-160 (182)
178 PRK13627 carnitine operon prot 99.5 1.4E-13 3E-18 155.3 17.3 115 1574-1705 56-170 (196)
179 TIGR01173 glmU UDP-N-acetylglu 99.5 9.8E-14 2.1E-18 182.5 18.2 96 1574-1678 349-444 (451)
180 PRK10502 putative acyl transfe 99.5 8.5E-14 1.8E-18 156.7 12.8 116 1561-1678 39-178 (182)
181 PLN02472 uncharacterized prote 99.5 4.9E-13 1.1E-17 155.2 18.0 119 1574-1705 105-225 (246)
182 PLN02296 carbonate dehydratase 99.5 4.5E-13 9.8E-18 157.6 16.9 100 1593-1705 119-218 (269)
183 PRK14360 glmU bifunctional N-a 99.5 3.1E-13 6.7E-18 177.4 17.1 92 1575-1675 350-441 (450)
184 PRK14355 glmU bifunctional N-a 99.5 8.8E-13 1.9E-17 172.8 18.8 90 1574-1672 356-445 (459)
185 PRK09451 glmU bifunctional N-a 99.4 7.2E-13 1.6E-17 173.6 17.3 90 1574-1672 353-443 (456)
186 PRK09188 serine/threonine prot 99.4 5.1E-13 1.1E-17 165.0 13.9 115 889-1030 207-326 (365)
187 PRK14352 glmU bifunctional N-a 99.4 1.3E-12 2.8E-17 172.0 18.5 90 1574-1672 358-448 (482)
188 PRK09527 lacA galactoside O-ac 99.4 6E-13 1.3E-17 150.1 12.4 104 1573-1679 75-185 (203)
189 PRK14357 glmU bifunctional N-a 99.4 1.3E-12 2.8E-17 171.4 17.1 74 1594-1673 359-432 (448)
190 TIGR02287 PaaY phenylacetic ac 99.4 2E-12 4.4E-17 145.4 15.9 115 1574-1705 54-168 (192)
191 COG1045 CysE Serine acetyltran 99.4 7E-13 1.5E-17 142.2 11.0 110 1555-1675 61-170 (194)
192 TIGR02731 phytoene_desat phyto 99.4 1.1E-11 2.4E-16 163.0 24.8 42 23-65 1-42 (453)
193 PRK14353 glmU bifunctional N-a 99.4 2.3E-12 5.1E-17 168.8 18.1 73 1594-1672 356-428 (446)
194 PRK14358 glmU bifunctional N-a 99.4 3.3E-12 7.2E-17 167.1 17.7 88 1574-1670 358-445 (481)
195 PRK14354 glmU bifunctional N-a 99.4 2.6E-12 5.7E-17 169.1 16.8 90 1574-1672 352-441 (458)
196 TIGR02733 desat_CrtD C-3',4' d 99.4 4.4E-12 9.5E-17 168.3 18.9 54 22-76 2-55 (492)
197 TIGR02734 crtI_fam phytoene de 99.4 1.3E-11 2.8E-16 164.4 22.8 64 179-245 209-275 (502)
198 COG3380 Predicted NAD/FAD-depe 99.4 1.7E-12 3.7E-17 144.0 11.4 303 22-422 2-323 (331)
199 COG1233 Phytoene dehydrogenase 99.4 5.3E-12 1.1E-16 165.2 17.4 56 20-76 2-57 (487)
200 cd05825 LbH_wcaF_like wcaF-lik 99.4 2.8E-12 6E-17 131.5 11.1 98 1574-1673 4-105 (107)
201 PF01593 Amino_oxidase: Flavin 99.4 3.7E-12 7.9E-17 167.8 15.2 212 178-410 201-430 (450)
202 cd04745 LbH_paaY_like paaY-lik 99.4 1.2E-11 2.6E-16 136.2 16.2 93 1592-1697 60-152 (155)
203 PRK14356 glmU bifunctional N-a 99.4 1.1E-11 2.3E-16 163.1 18.5 89 1574-1671 357-445 (456)
204 PRK12461 UDP-N-acetylglucosami 99.3 1.3E-11 2.7E-16 145.8 16.6 87 1574-1671 78-168 (255)
205 cd03357 LbH_MAT_GAT Maltose O- 99.3 3.8E-12 8.2E-17 142.1 10.8 99 1573-1673 62-167 (169)
206 PLN02739 serine acetyltransfer 99.3 1.1E-11 2.4E-16 146.0 14.9 106 1570-1678 202-310 (355)
207 PRK10092 maltose O-acetyltrans 99.3 5E-12 1.1E-16 141.3 11.2 101 1572-1674 72-179 (183)
208 PLN02612 phytoene desaturase 99.3 1.4E-10 3.1E-15 154.3 26.4 46 20-66 92-137 (567)
209 cd03351 LbH_UDP-GlcNAc_AT UDP- 99.3 2.6E-11 5.7E-16 145.0 16.9 86 1575-1671 79-169 (254)
210 TIGR01852 lipid_A_lpxA acyl-[a 99.3 3.1E-11 6.8E-16 144.3 17.3 87 1574-1671 77-168 (254)
211 TIGR02732 zeta_caro_desat caro 99.3 7.5E-11 1.6E-15 154.1 22.1 42 23-65 1-42 (474)
212 PRK05289 UDP-N-acetylglucosami 99.3 2.5E-11 5.5E-16 145.0 16.1 86 1574-1670 81-171 (262)
213 PRK11132 cysE serine acetyltra 99.3 7.5E-12 1.6E-16 146.1 11.3 103 1571-1675 139-244 (273)
214 KOG4750 Serine O-acetyltransfe 99.3 2.9E-12 6.2E-17 137.0 6.3 96 1573-1673 154-249 (269)
215 cd03349 LbH_XAT Xenobiotic acy 99.3 1.3E-11 2.9E-16 132.7 11.1 105 1574-1680 2-129 (145)
216 TIGR03532 DapD_Ac 2,3,4,5-tetr 99.3 3.9E-11 8.4E-16 139.5 15.8 57 1621-1680 159-215 (231)
217 TIGR03308 phn_thr-fam phosphon 99.3 2.8E-11 6E-16 138.3 14.2 58 1620-1679 106-163 (204)
218 PLN02694 serine O-acetyltransf 99.3 1.3E-11 2.9E-16 143.1 11.4 103 1570-1674 157-262 (294)
219 COG1207 GlmU N-acetylglucosami 99.3 1.6E-11 3.5E-16 145.2 11.8 82 1317-1399 268-354 (460)
220 PRK14359 glmU bifunctional N-a 99.3 4E-11 8.7E-16 156.6 16.7 84 1573-1671 331-414 (430)
221 COG0110 WbbJ Acetyltransferase 99.3 1.3E-11 2.9E-16 141.8 10.3 101 1573-1675 67-175 (190)
222 cd04646 LbH_Dynactin_6 Dynacti 99.3 1E-10 2.2E-15 129.5 16.3 67 1594-1672 67-133 (164)
223 COG1044 LpxD UDP-3-O-[3-hydrox 99.2 6.7E-11 1.5E-15 137.9 15.2 79 1594-1672 209-292 (338)
224 TIGR02730 carot_isom carotene 99.2 4.2E-10 9.1E-15 149.1 24.2 54 22-76 1-54 (493)
225 cd04650 LbH_FBP Ferripyochelin 99.2 1.3E-10 2.8E-15 127.3 15.8 92 1592-1696 60-151 (154)
226 PLN02487 zeta-carotene desatur 99.2 2E-09 4.3E-14 141.3 27.2 44 21-65 75-118 (569)
227 cd05636 LbH_G1P_TT_C_like Puta 99.2 3.8E-10 8.2E-15 125.8 17.4 62 1594-1655 88-162 (163)
228 PRK09677 putative lipopolysacc 99.2 7.5E-11 1.6E-15 134.2 11.5 103 1574-1679 66-184 (192)
229 cd04645 LbH_gamma_CA_like Gamm 99.2 2.5E-10 5.5E-15 125.6 14.5 93 1592-1697 59-151 (153)
230 PRK00892 lpxD UDP-3-O-[3-hydro 99.2 5.1E-10 1.1E-14 139.9 18.6 89 1573-1672 203-293 (343)
231 TIGR02304 aden_form_hyp probab 99.2 6.6E-09 1.4E-13 132.0 28.6 236 637-939 101-359 (430)
232 cd03350 LbH_THP_succinylT 2,3, 99.2 4.2E-10 9E-15 121.6 15.2 63 1593-1671 75-138 (139)
233 TIGR01853 lipid_A_lpxD UDP-3-O 99.2 6.5E-10 1.4E-14 136.3 18.2 52 1620-1671 233-284 (324)
234 PRK09527 lacA galactoside O-ac 99.1 4.6E-11 9.9E-16 135.0 7.2 108 2166-2274 55-167 (203)
235 TIGR01172 cysE serine O-acetyl 99.1 1.8E-10 3.9E-15 127.1 11.7 97 1571-1672 59-161 (162)
236 PRK10092 maltose O-acetyltrans 99.1 5.1E-11 1.1E-15 133.2 6.6 102 2172-2274 59-165 (183)
237 TIGR03467 HpnE squalene-associ 99.1 1.3E-09 2.8E-14 142.5 20.0 67 179-248 186-256 (419)
238 PRK10191 putative acyl transfe 99.1 2.5E-10 5.4E-15 121.9 10.3 95 1574-1674 48-142 (146)
239 PLN02357 serine acetyltransfer 99.1 4.2E-10 9.1E-15 134.5 13.1 104 1571-1676 224-330 (360)
240 cd05825 LbH_wcaF_like wcaF-lik 99.1 1.9E-10 4E-15 118.1 8.8 86 2185-2273 4-91 (107)
241 PTZ00363 rab-GDP dissociation 99.1 1.7E-09 3.7E-14 138.1 17.4 49 18-67 1-49 (443)
242 COG0110 WbbJ Acetyltransferase 99.1 2.1E-10 4.6E-15 131.8 8.2 93 2181-2274 61-160 (190)
243 cd00710 LbH_gamma_CA Gamma car 99.1 2.7E-09 5.8E-14 119.0 16.3 75 1574-1665 65-139 (167)
244 cd03359 LbH_Dynactin_5 Dynacti 99.1 3.6E-09 7.8E-14 117.3 16.9 76 1594-1682 73-148 (161)
245 COG2081 Predicted flavoprotein 99.1 1.2E-09 2.6E-14 130.4 13.8 159 19-241 1-162 (408)
246 cd03358 LbH_WxcM_N_like WcxM-l 99.0 7.4E-10 1.6E-14 116.8 10.3 97 1573-1673 16-116 (119)
247 cd04646 LbH_Dynactin_6 Dynacti 99.0 2.2E-09 4.8E-14 118.9 14.4 72 1574-1659 67-138 (164)
248 cd04647 LbH_MAT_like Maltose O 99.0 1.4E-09 3E-14 112.7 10.8 98 1574-1673 2-107 (109)
249 TIGR00965 dapD 2,3,4,5-tetrahy 99.0 7.2E-09 1.6E-13 119.7 17.1 64 1592-1671 172-237 (269)
250 PF00550 PP-binding: Phosphopa 99.0 7.5E-10 1.6E-14 103.3 7.1 67 1084-1150 1-67 (67)
251 TIGR03570 NeuD_NnaD sugar O-ac 99.0 3.6E-09 7.7E-14 123.1 13.9 66 1594-1672 136-201 (201)
252 cd03352 LbH_LpxD UDP-3-O-acyl- 99.0 1.3E-08 2.8E-13 118.5 17.6 88 1573-1671 92-181 (205)
253 cd03354 LbH_SAT Serine acetylt 99.0 2.3E-09 5E-14 109.0 9.9 97 1573-1671 2-101 (101)
254 cd03357 LbH_MAT_GAT Maltose O- 98.9 1.5E-09 3.2E-14 121.4 8.5 88 2184-2274 62-154 (169)
255 PRK14358 glmU bifunctional N-a 98.9 8.2E-09 1.8E-13 135.4 16.4 81 1573-1668 340-427 (481)
256 cd03360 LbH_AT_putative Putati 98.9 9.7E-09 2.1E-13 119.0 14.5 65 1594-1671 133-197 (197)
257 PRK11830 dapD 2,3,4,5-tetrahyd 98.9 2.2E-08 4.8E-13 117.3 16.5 76 1594-1685 177-263 (272)
258 COG1045 CysE Serine acetyltran 98.9 7.7E-09 1.7E-13 111.6 11.0 94 1317-1414 73-171 (194)
259 cd00710 LbH_gamma_CA Gamma car 98.9 2.5E-08 5.4E-13 111.3 15.5 80 1575-1667 44-125 (167)
260 cd04649 LbH_THP_succinylT_puta 98.9 1.5E-08 3.3E-13 105.5 12.1 80 1573-1661 31-110 (147)
261 PF03486 HI0933_like: HI0933-l 98.9 1.8E-08 3.8E-13 127.5 14.4 150 22-241 1-161 (409)
262 PRK11132 cysE serine acetyltra 98.9 7.3E-09 1.6E-13 121.3 10.0 99 1315-1414 139-245 (273)
263 TIGR00965 dapD 2,3,4,5-tetrahy 98.8 2.2E-08 4.8E-13 115.7 13.4 80 1573-1660 129-211 (269)
264 PLN02296 carbonate dehydratase 98.8 3.8E-08 8.3E-13 116.3 15.0 71 1574-1658 120-191 (269)
265 cd03349 LbH_XAT Xenobiotic acy 98.8 1.1E-08 2.4E-13 110.3 9.6 95 1318-1413 2-124 (145)
266 PRK13977 myosin-cross-reactive 98.8 2.4E-08 5.2E-13 127.9 14.1 47 19-66 20-70 (576)
267 PLN02694 serine O-acetyltransf 98.8 8.4E-09 1.8E-13 120.2 8.9 100 1314-1414 157-264 (294)
268 COG0663 PaaY Carbonic anhydras 98.8 9.9E-09 2.1E-13 109.8 8.7 98 1318-1415 30-144 (176)
269 TIGR03536 DapD_gpp 2,3,4,5-tet 98.8 2.2E-08 4.7E-13 115.6 11.9 61 1594-1659 225-285 (341)
270 PRK09677 putative lipopolysacc 98.8 1.4E-08 3E-13 115.7 10.1 97 1317-1414 65-182 (192)
271 PRK14355 glmU bifunctional N-a 98.8 3.6E-08 7.9E-13 129.5 15.5 83 1573-1670 338-427 (459)
272 cd03359 LbH_Dynactin_5 Dynacti 98.8 6E-08 1.3E-12 107.5 14.6 71 1574-1658 73-144 (161)
273 TIGR01173 glmU UDP-N-acetylglu 98.8 3.8E-08 8.2E-13 129.8 15.4 82 1574-1670 332-420 (451)
274 KOG4750 Serine O-acetyltransfe 98.8 9.6E-09 2.1E-13 110.5 6.5 95 1317-1415 154-253 (269)
275 PLN02739 serine acetyltransfer 98.8 4.2E-08 9E-13 116.3 12.1 99 1315-1414 203-309 (355)
276 PF13450 NAD_binding_8: NAD(P) 98.8 6.8E-09 1.5E-13 96.2 4.4 42 26-68 1-42 (68)
277 TIGR01172 cysE serine O-acetyl 98.7 4E-08 8.8E-13 108.5 11.0 95 1313-1411 57-162 (162)
278 cd03358 LbH_WxcM_N_like WcxM-l 98.7 2.9E-08 6.3E-13 104.6 9.5 95 1317-1413 16-118 (119)
279 PRK09451 glmU bifunctional N-a 98.7 6.7E-08 1.5E-12 127.0 14.9 82 1574-1670 336-424 (456)
280 PLN02357 serine acetyltransfer 98.7 2.4E-08 5.2E-13 119.7 9.1 94 1317-1414 232-330 (360)
281 KOG4254 Phytoene desaturase [C 98.7 3.2E-07 6.9E-12 109.5 18.0 63 176-241 251-316 (561)
282 cd04745 LbH_paaY_like paaY-lik 98.7 1.3E-07 2.8E-12 104.3 14.1 63 1574-1650 62-124 (155)
283 TIGR02287 PaaY phenylacetic ac 98.7 1.2E-07 2.5E-12 107.2 13.7 62 1575-1650 71-132 (192)
284 PLN02472 uncharacterized prote 98.7 1.6E-07 3.5E-12 109.6 15.1 63 1574-1650 127-189 (246)
285 cd04645 LbH_gamma_CA_like Gamm 98.7 1.6E-07 3.4E-12 103.6 14.2 70 1575-1658 62-132 (153)
286 cd03353 LbH_GlmU_C N-acetyl-gl 98.7 2.3E-07 5E-12 106.8 16.0 47 1621-1667 118-171 (193)
287 cd04650 LbH_FBP Ferripyochelin 98.7 1.8E-07 3.9E-12 102.7 14.4 70 1575-1658 63-133 (154)
288 PRK14356 glmU bifunctional N-a 98.7 1.1E-07 2.5E-12 125.1 15.1 62 1594-1667 357-425 (456)
289 PRK10191 putative acyl transfe 98.7 7E-08 1.5E-12 103.3 10.5 90 1318-1412 48-142 (146)
290 COG1043 LpxA Acyl-[acyl carrie 98.7 6.5E-08 1.4E-12 106.5 10.2 86 1575-1671 83-173 (260)
291 PLN02172 flavin-containing mon 98.7 1.1E-07 2.4E-12 123.2 13.9 45 17-62 6-50 (461)
292 PRK14352 glmU bifunctional N-a 98.7 1.7E-07 3.7E-12 123.8 15.9 79 1574-1667 341-426 (482)
293 PRK14353 glmU bifunctional N-a 98.7 1.5E-07 3.2E-12 123.6 15.2 62 1594-1667 339-407 (446)
294 PRK13627 carnitine operon prot 98.7 2E-07 4.3E-12 105.7 13.7 63 1574-1650 72-134 (196)
295 cd03350 LbH_THP_succinylT 2,3, 98.6 2E-07 4.3E-12 100.8 12.5 86 1574-1664 32-117 (139)
296 PRK14360 glmU bifunctional N-a 98.6 2.1E-07 4.7E-12 122.4 15.0 47 1621-1667 364-417 (450)
297 cd00208 LbetaH Left-handed par 98.6 1.2E-07 2.6E-12 91.4 8.8 77 1318-1398 1-77 (78)
298 COG3349 Uncharacterized conser 98.6 1.8E-07 4E-12 116.5 11.7 46 22-68 1-46 (485)
299 cd04647 LbH_MAT_like Maltose O 98.6 2.9E-07 6.4E-12 95.3 10.6 94 1318-1412 2-108 (109)
300 PF13738 Pyr_redox_3: Pyridine 98.6 4.3E-07 9.2E-12 105.8 12.9 50 189-242 85-134 (203)
301 cd05636 LbH_G1P_TT_C_like Puta 98.5 9.1E-07 2E-11 98.7 14.8 53 1336-1399 17-69 (163)
302 PRK14354 glmU bifunctional N-a 98.5 5.4E-07 1.2E-11 118.9 14.5 81 1574-1669 335-422 (458)
303 PRK14357 glmU bifunctional N-a 98.5 4.3E-07 9.3E-12 119.4 13.3 50 1621-1670 357-413 (448)
304 cd00208 LbetaH Left-handed par 98.5 3.5E-07 7.5E-12 88.2 8.3 78 2185-2272 1-78 (78)
305 TIGR03535 DapD_actino 2,3,4,5- 98.5 3.3E-07 7.2E-12 105.7 8.6 83 1572-1659 164-260 (319)
306 TIGR00031 UDP-GALP_mutase UDP- 98.5 2.4E-07 5.3E-12 115.6 8.1 45 22-67 2-46 (377)
307 TIGR03532 DapD_Ac 2,3,4,5-tetr 98.5 5.2E-07 1.1E-11 105.3 10.2 96 1317-1414 98-212 (231)
308 PF01266 DAO: FAD dependent ox 98.5 1.3E-06 2.9E-11 111.5 15.0 58 180-241 135-198 (358)
309 PRK14359 glmU bifunctional N-a 98.5 9.5E-07 2.1E-11 115.6 13.9 69 1573-1654 342-415 (430)
310 cd04649 LbH_THP_succinylT_puta 98.5 5.7E-07 1.2E-11 94.0 9.1 66 1336-1406 47-112 (147)
311 cd03354 LbH_SAT Serine acetylt 98.5 5.6E-07 1.2E-11 91.5 9.0 92 1317-1409 2-101 (101)
312 COG0579 Predicted dehydrogenas 98.4 1.1E-06 2.3E-11 109.8 13.0 43 20-63 2-46 (429)
313 PRK11830 dapD 2,3,4,5-tetrahyd 98.4 7.7E-07 1.7E-11 104.5 9.9 86 1572-1662 131-216 (272)
314 TIGR03570 NeuD_NnaD sugar O-ac 98.4 8.9E-07 1.9E-11 103.0 9.9 92 1317-1410 99-201 (201)
315 TIGR03535 DapD_actino 2,3,4,5- 98.4 9.5E-07 2.1E-11 102.0 8.7 86 1315-1405 163-263 (319)
316 PF04443 LuxE: Acyl-protein sy 98.3 3.3E-05 7.1E-10 96.4 22.6 233 633-914 87-350 (365)
317 PF00743 FMO-like: Flavin-bind 98.3 1.3E-06 2.8E-11 114.7 10.8 37 22-59 2-38 (531)
318 KOG1399 Flavin-containing mono 98.3 2.8E-06 6.1E-11 107.7 13.4 44 18-62 3-46 (448)
319 COG2171 DapD Tetrahydrodipicol 98.3 6.1E-07 1.3E-11 101.5 6.3 66 1336-1404 156-221 (271)
320 COG0644 FixC Dehydrogenases (f 98.3 2.7E-06 5.9E-11 109.5 13.1 43 20-63 2-44 (396)
321 COG2171 DapD Tetrahydrodipicol 98.3 6.9E-07 1.5E-11 101.1 6.5 91 1572-1669 137-227 (271)
322 TIGR03308 phn_thr-fam phosphon 98.3 1.9E-06 4.1E-11 98.8 9.4 77 1336-1413 53-159 (204)
323 PRK12409 D-amino acid dehydrog 98.3 2.7E-06 5.9E-11 110.6 11.9 37 22-59 2-38 (410)
324 PRK07364 2-octaprenyl-6-methox 98.3 3.8E-06 8.3E-11 109.6 13.1 43 14-57 11-53 (415)
325 TIGR03536 DapD_gpp 2,3,4,5-tet 98.3 1.8E-06 3.9E-11 100.2 8.5 87 1315-1406 188-289 (341)
326 PRK10157 putative oxidoreducta 98.3 3.1E-06 6.8E-11 109.9 11.6 39 21-60 5-43 (428)
327 cd03360 LbH_AT_putative Putati 98.3 2.9E-06 6.2E-11 98.2 9.8 91 1317-1409 96-197 (197)
328 COG1635 THI4 Ribulose 1,5-bisp 98.2 7.3E-07 1.6E-11 97.4 4.1 50 9-61 20-69 (262)
329 PRK06481 fumarate reductase fl 98.2 4.9E-06 1.1E-10 110.3 12.8 41 20-61 60-100 (506)
330 PRK11728 hydroxyglutarate oxid 98.2 6E-06 1.3E-10 106.6 13.1 41 21-62 2-44 (393)
331 PRK08274 tricarballylate dehyd 98.2 8E-06 1.7E-10 108.0 14.4 43 18-61 1-45 (466)
332 PRK13339 malate:quinone oxidor 98.2 8E-06 1.7E-10 105.8 13.5 41 21-62 6-48 (497)
333 TIGR01377 soxA_mon sarcosine o 98.2 5.5E-06 1.2E-10 106.9 12.1 36 22-58 1-36 (380)
334 KOG2820 FAD-dependent oxidored 98.2 2.9E-05 6.2E-10 90.4 16.2 40 17-57 3-42 (399)
335 PRK11259 solA N-methyltryptoph 98.2 6.8E-06 1.5E-10 105.8 12.7 39 20-59 2-40 (376)
336 PRK06183 mhpA 3-(3-hydroxyphen 98.2 3.5E-06 7.7E-11 113.1 10.1 39 19-58 8-46 (538)
337 PRK06847 hypothetical protein; 98.2 9.1E-06 2E-10 104.6 13.4 39 18-57 1-39 (375)
338 TIGR00292 thiazole biosynthesi 98.2 1.5E-05 3.2E-10 95.1 14.0 50 9-61 11-60 (254)
339 PRK10015 oxidoreductase; Provi 98.2 1.4E-05 3E-10 103.8 14.8 39 20-59 4-42 (429)
340 PRK08244 hypothetical protein; 98.2 4.9E-06 1.1E-10 110.7 10.9 54 187-241 101-154 (493)
341 TIGR00275 flavoprotein, HI0933 98.2 7.8E-06 1.7E-10 105.1 12.3 37 25-62 1-37 (400)
342 PRK06184 hypothetical protein; 98.2 1.1E-05 2.4E-10 107.6 14.1 37 20-57 2-38 (502)
343 PRK08773 2-octaprenyl-3-methyl 98.2 1.1E-05 2.5E-10 104.2 13.6 39 18-57 3-41 (392)
344 PRK00711 D-amino acid dehydrog 98.2 1.3E-05 2.7E-10 104.8 14.1 41 22-63 1-41 (416)
345 PTZ00383 malate:quinone oxidor 98.1 1.8E-05 3.9E-10 103.1 14.9 40 20-59 44-84 (497)
346 COG0562 Glf UDP-galactopyranos 98.1 6.6E-06 1.4E-10 95.0 9.2 57 22-79 2-58 (374)
347 COG2072 TrkA Predicted flavopr 98.1 9.7E-06 2.1E-10 104.9 11.9 46 18-63 5-50 (443)
348 PRK04176 ribulose-1,5-biphosph 98.1 1.8E-05 3.9E-10 94.7 13.2 51 8-61 14-64 (257)
349 PRK08163 salicylate hydroxylas 98.1 1.8E-05 3.9E-10 102.6 14.3 40 18-58 1-40 (396)
350 PRK05257 malate:quinone oxidor 98.1 2.6E-05 5.6E-10 102.2 15.0 43 19-62 3-47 (494)
351 PRK09126 hypothetical protein; 98.1 1.6E-05 3.4E-10 103.0 12.6 37 20-57 2-38 (392)
352 PRK07045 putative monooxygenas 98.1 9.1E-06 2E-10 105.0 10.3 37 20-57 4-40 (388)
353 PRK06834 hypothetical protein; 98.1 2.5E-05 5.5E-10 102.8 14.3 36 20-56 2-37 (488)
354 COG0654 UbiH 2-polyprenyl-6-me 98.1 1.4E-05 3E-10 102.8 11.7 33 21-54 2-34 (387)
355 TIGR03329 Phn_aa_oxid putative 98.1 2.9E-05 6.4E-10 102.2 14.9 36 20-56 23-60 (460)
356 TIGR01320 mal_quin_oxido malat 98.1 2E-05 4.3E-10 103.2 13.1 39 22-61 1-41 (483)
357 TIGR03364 HpnW_proposed FAD de 98.1 2.2E-05 4.8E-10 100.6 13.2 34 22-56 1-34 (365)
358 TIGR02032 GG-red-SF geranylger 98.1 2.1E-05 4.5E-10 97.6 12.3 37 22-59 1-37 (295)
359 PRK07236 hypothetical protein; 98.1 3.6E-05 7.8E-10 99.3 14.9 37 19-56 4-40 (386)
360 TIGR01988 Ubi-OHases Ubiquinon 98.0 1.9E-05 4.1E-10 102.1 12.4 35 23-58 1-35 (385)
361 PRK08132 FAD-dependent oxidore 98.0 2.5E-05 5.3E-10 105.4 13.6 39 18-57 20-58 (547)
362 TIGR01373 soxB sarcosine oxida 98.0 3.6E-05 7.8E-10 100.1 14.6 38 20-57 29-67 (407)
363 TIGR01813 flavo_cyto_c flavocy 98.0 3E-05 6.4E-10 101.9 13.8 38 23-61 1-39 (439)
364 PRK05883 acyl carrier protein; 98.0 1.4E-05 3E-10 78.5 7.8 76 1078-1153 11-87 (91)
365 PRK12266 glpD glycerol-3-phosp 98.0 1.8E-05 3.8E-10 105.0 11.6 43 18-61 3-45 (508)
366 PF01946 Thi4: Thi4 family; PD 98.0 3E-06 6.4E-11 94.1 3.5 39 21-60 17-55 (230)
367 PRK13369 glycerol-3-phosphate 98.0 4.9E-05 1.1E-09 101.0 15.7 41 18-59 3-43 (502)
368 CHL00124 acpP acyl carrier pro 98.0 1.1E-05 2.3E-10 78.5 7.0 76 1079-1154 3-79 (82)
369 PRK08849 2-octaprenyl-3-methyl 98.0 6E-06 1.3E-10 106.3 6.6 34 21-55 3-36 (384)
370 PRK01747 mnmC bifunctional tRN 98.0 1.6E-05 3.5E-10 109.3 11.1 38 21-59 260-297 (662)
371 PRK00982 acpP acyl carrier pro 98.0 1.1E-05 2.3E-10 77.7 6.6 72 1081-1152 3-75 (78)
372 PF01494 FAD_binding_3: FAD bi 98.0 6.9E-06 1.5E-10 104.8 7.0 53 189-241 114-167 (356)
373 PRK07588 hypothetical protein; 98.0 4.5E-05 9.8E-10 98.6 14.5 35 22-57 1-35 (391)
374 PF00890 FAD_binding_2: FAD bi 98.0 3.1E-05 6.8E-10 101.1 13.1 36 23-59 1-36 (417)
375 PRK11101 glpA sn-glycerol-3-ph 98.0 6.5E-05 1.4E-09 100.5 16.2 38 21-59 6-43 (546)
376 PRK06126 hypothetical protein; 98.0 2.4E-05 5.2E-10 105.6 12.3 36 20-56 6-41 (545)
377 PRK12839 hypothetical protein; 98.0 8.2E-05 1.8E-09 99.6 16.8 49 14-63 1-49 (572)
378 COG0665 DadA Glycine/D-amino a 98.0 2.9E-05 6.3E-10 100.5 11.7 40 19-59 2-41 (387)
379 PRK07190 hypothetical protein; 98.0 1.6E-05 3.5E-10 104.5 9.2 36 21-57 5-40 (487)
380 PRK07121 hypothetical protein; 97.9 0.00011 2.4E-09 97.7 16.8 41 20-61 19-59 (492)
381 KOG1461 Translation initiation 97.9 1.8E-05 3.8E-10 98.8 8.4 68 1576-1658 353-420 (673)
382 PRK12834 putative FAD-binding 97.9 7.2E-05 1.6E-09 100.5 14.9 43 19-62 2-46 (549)
383 TIGR01984 UbiH 2-polyprenyl-6- 97.9 4.8E-05 1E-09 98.2 12.7 34 23-57 1-35 (382)
384 KOG3121 Dynactin, subunit p25 97.9 2E-05 4.3E-10 79.0 6.7 88 1573-1672 54-151 (184)
385 TIGR03219 salicylate_mono sali 97.9 4.1E-05 8.9E-10 99.7 11.8 49 189-241 105-154 (414)
386 PRK05350 acyl carrier protein; 97.9 2.2E-05 4.8E-10 76.0 6.9 76 1079-1154 4-80 (82)
387 PRK08013 oxidoreductase; Provi 97.9 4.8E-05 1E-09 98.5 12.3 37 20-57 2-38 (400)
388 PRK08243 4-hydroxybenzoate 3-m 97.9 6.3E-05 1.4E-09 97.2 13.2 35 21-56 2-36 (392)
389 PRK07494 2-octaprenyl-6-methox 97.9 5E-05 1.1E-09 98.2 12.2 37 20-57 6-42 (388)
390 PRK05714 2-octaprenyl-3-methyl 97.9 5.7E-05 1.2E-09 98.2 12.8 35 21-56 2-36 (405)
391 PRK07333 2-octaprenyl-6-methox 97.9 5.6E-05 1.2E-09 98.3 12.7 34 22-56 2-37 (403)
392 PRK06753 hypothetical protein; 97.9 5.3E-05 1.1E-09 97.4 12.2 35 22-57 1-35 (373)
393 PRK07538 hypothetical protein; 97.9 4.9E-05 1.1E-09 98.9 12.0 35 22-57 1-35 (413)
394 PRK05732 2-octaprenyl-6-methox 97.9 6E-05 1.3E-09 97.8 12.7 36 19-55 1-39 (395)
395 PRK07608 ubiquinone biosynthes 97.9 6.6E-05 1.4E-09 97.1 13.0 36 21-57 5-40 (388)
396 PRK06175 L-aspartate oxidase; 97.9 0.00011 2.5E-09 95.3 15.1 39 20-60 3-41 (433)
397 PRK06475 salicylate hydroxylas 97.9 0.0001 2.2E-09 95.6 14.5 35 22-57 3-37 (400)
398 COG0578 GlpA Glycerol-3-phosph 97.9 0.00023 5E-09 91.1 16.8 41 20-61 11-51 (532)
399 PF03321 GH3: GH3 auxin-respon 97.9 0.00027 5.9E-09 93.5 18.2 61 851-935 353-418 (528)
400 PRK06134 putative FAD-binding 97.9 0.00027 5.8E-09 95.4 18.3 46 17-63 8-53 (581)
401 PF06039 Mqo: Malate:quinone o 97.9 0.00036 7.9E-09 86.2 17.5 54 188-241 180-239 (488)
402 PRK08850 2-octaprenyl-6-methox 97.9 7.4E-05 1.6E-09 97.1 12.5 36 18-54 1-36 (405)
403 PRK06185 hypothetical protein; 97.9 9.8E-05 2.1E-09 96.2 13.7 37 19-56 4-40 (407)
404 TIGR01292 TRX_reduct thioredox 97.8 9.9E-05 2.1E-09 91.8 13.2 38 22-61 1-38 (300)
405 PRK09184 acyl carrier protein; 97.8 3.9E-05 8.5E-10 74.7 7.2 73 1080-1152 5-85 (89)
406 PRK12835 3-ketosteroid-delta-1 97.8 0.00023 4.9E-09 95.8 16.8 43 17-60 7-49 (584)
407 TIGR00517 acyl_carrier acyl ca 97.8 3.5E-05 7.6E-10 73.9 6.6 72 1081-1152 3-75 (77)
408 PRK12449 acyl carrier protein; 97.8 5.5E-05 1.2E-09 73.2 7.7 74 1079-1152 3-77 (80)
409 PF14602 Hexapep_2: Hexapeptid 97.8 2.4E-05 5.1E-10 61.0 3.9 34 2238-2273 1-34 (34)
410 PRK08020 ubiF 2-octaprenyl-3-m 97.8 0.00012 2.6E-09 94.8 12.8 36 20-56 4-39 (391)
411 PRK05868 hypothetical protein; 97.8 0.00018 3.9E-09 92.0 14.0 35 22-57 2-36 (372)
412 PLN02697 lycopene epsilon cycl 97.8 0.0021 4.5E-08 84.6 23.8 48 7-56 95-142 (529)
413 TIGR02023 BchP-ChlP geranylger 97.8 0.0001 2.2E-09 95.1 11.7 32 22-54 1-32 (388)
414 PF13193 AMP-binding_C: AMP-bi 97.8 3.5E-05 7.6E-10 73.1 5.5 72 927-1020 1-73 (73)
415 PF14602 Hexapep_2: Hexapeptid 97.8 2.3E-05 5E-10 61.1 3.4 34 1622-1657 1-34 (34)
416 PRK12845 3-ketosteroid-delta-1 97.8 0.00013 2.9E-09 97.3 12.9 43 18-62 13-55 (564)
417 COG3433 Aryl carrier domain [S 97.8 4E-05 8.6E-10 68.0 5.2 67 1085-1152 2-68 (74)
418 PF05834 Lycopene_cycl: Lycope 97.8 0.00089 1.9E-08 85.6 19.9 34 23-57 1-36 (374)
419 PRK12842 putative succinate de 97.7 0.00012 2.5E-09 99.0 12.2 43 20-63 8-50 (574)
420 PRK07573 sdhA succinate dehydr 97.7 0.00012 2.5E-09 99.4 12.2 39 20-59 34-72 (640)
421 smart00823 PKS_PP Phosphopante 97.7 7.8E-05 1.7E-09 73.0 7.9 73 1080-1152 11-84 (86)
422 KOG3121 Dynactin, subunit p25 97.7 4.8E-05 1E-09 76.3 6.0 92 1315-1413 52-154 (184)
423 PRK09897 hypothetical protein; 97.7 0.00014 3.1E-09 95.3 12.0 42 22-63 2-45 (534)
424 PRK07081 acyl carrier protein; 97.7 8.3E-05 1.8E-09 71.9 7.0 73 1083-1155 2-78 (83)
425 PRK12844 3-ketosteroid-delta-1 97.7 0.00028 6E-09 94.7 14.4 41 20-61 5-45 (557)
426 KOG2404 Fumarate reductase, fl 97.7 0.0003 6.5E-09 80.9 11.9 39 23-62 11-49 (477)
427 KOG1335 Dihydrolipoamide dehyd 97.7 0.00021 4.4E-09 84.4 10.8 44 20-64 38-81 (506)
428 PRK05945 sdhA succinate dehydr 97.7 0.00029 6.3E-09 95.0 13.8 40 20-60 2-43 (575)
429 PRK12837 3-ketosteroid-delta-1 97.6 0.0006 1.3E-08 90.8 16.4 40 20-61 6-45 (513)
430 PRK06617 2-octaprenyl-6-methox 97.6 0.00022 4.8E-09 91.4 11.8 33 22-55 2-34 (374)
431 PLN02927 antheraxanthin epoxid 97.6 0.00027 5.9E-09 94.1 12.7 49 189-241 194-243 (668)
432 PRK12843 putative FAD-binding 97.6 0.00074 1.6E-08 91.1 17.1 43 20-63 15-57 (578)
433 PRK07117 acyl carrier protein; 97.6 0.00013 2.9E-09 69.4 6.9 74 1079-1152 3-77 (79)
434 PRK05828 acyl carrier protein; 97.6 0.00017 3.7E-09 69.5 7.6 76 1079-1154 3-79 (84)
435 PRK15317 alkyl hydroperoxide r 97.6 0.00025 5.4E-09 94.7 12.1 39 20-61 210-248 (517)
436 PRK11445 putative oxidoreducta 97.6 0.00033 7.1E-09 89.0 12.6 34 22-57 2-35 (351)
437 TIGR01989 COQ6 Ubiquinone bios 97.6 0.00033 7.2E-09 91.7 12.6 33 22-55 1-37 (437)
438 PLN02464 glycerol-3-phosphate 97.6 0.0002 4.3E-09 96.9 10.7 39 20-59 70-108 (627)
439 PRK08294 phenol 2-monooxygenas 97.6 0.00057 1.2E-08 92.8 15.0 38 18-56 29-67 (634)
440 PRK06069 sdhA succinate dehydr 97.6 0.00095 2.1E-08 90.3 17.1 41 20-61 4-47 (577)
441 PTZ00306 NADH-dependent fumara 97.6 0.0002 4.4E-09 103.5 11.2 42 19-61 407-448 (1167)
442 TIGR01812 sdhA_frdA_Gneg succi 97.6 0.00047 1E-08 93.4 14.1 38 23-61 1-38 (566)
443 PRK12779 putative bifunctional 97.6 6.8E-05 1.5E-09 105.0 6.2 43 19-62 304-346 (944)
444 TIGR03315 Se_ygfK putative sel 97.5 8.7E-05 1.9E-09 102.6 6.5 43 20-63 536-578 (1012)
445 PRK07395 L-aspartate oxidase; 97.5 0.00062 1.3E-08 90.9 14.3 40 19-60 7-46 (553)
446 TIGR03140 AhpF alkyl hydropero 97.5 0.00038 8.2E-09 92.8 12.2 40 19-61 210-249 (515)
447 PRK06996 hypothetical protein; 97.5 0.0002 4.2E-09 92.8 8.9 37 20-56 10-49 (398)
448 PTZ00139 Succinate dehydrogena 97.5 0.00095 2.1E-08 90.4 15.7 41 20-61 28-68 (617)
449 COG1148 HdrA Heterodisulfide r 97.5 7.8E-05 1.7E-09 90.4 4.5 43 20-63 123-165 (622)
450 PRK05192 tRNA uridine 5-carbox 97.5 0.00045 9.7E-09 90.4 11.6 40 19-59 2-42 (618)
451 PRK08958 sdhA succinate dehydr 97.5 0.0011 2.3E-08 89.4 15.7 39 21-60 7-45 (588)
452 TIGR00551 nadB L-aspartate oxi 97.5 0.001 2.2E-08 88.1 15.3 38 21-60 2-39 (488)
453 PRK07803 sdhA succinate dehydr 97.5 0.00051 1.1E-08 93.3 12.5 38 21-59 8-45 (626)
454 PRK07843 3-ketosteroid-delta-1 97.5 0.001 2.2E-08 89.4 15.1 40 21-61 7-46 (557)
455 PRK06263 sdhA succinate dehydr 97.5 0.0015 3.3E-08 87.7 16.7 39 20-60 6-45 (543)
456 PF13454 NAD_binding_9: FAD-NA 97.5 0.00074 1.6E-08 74.7 11.4 35 204-242 119-153 (156)
457 KOG2853 Possible oxidoreductas 97.5 0.0031 6.8E-08 73.3 16.4 47 20-67 85-144 (509)
458 PRK12831 putative oxidoreducta 97.5 0.00014 3.1E-09 95.2 6.6 44 18-62 137-180 (464)
459 PRK08071 L-aspartate oxidase; 97.5 0.0004 8.6E-09 92.2 10.7 39 21-61 3-41 (510)
460 PRK06115 dihydrolipoamide dehy 97.4 0.00011 2.4E-09 96.8 5.3 43 20-63 2-44 (466)
461 PF06100 Strep_67kDa_ant: Stre 97.4 0.0014 3E-08 82.2 14.4 45 21-65 2-49 (500)
462 PRK07804 L-aspartate oxidase; 97.4 0.001 2.2E-08 89.1 14.3 41 19-60 14-54 (541)
463 PLN02815 L-aspartate oxidase 97.4 0.00048 1E-08 92.3 11.1 45 14-60 22-66 (594)
464 PRK05249 soluble pyridine nucl 97.4 0.00011 2.4E-09 97.1 5.2 43 20-63 4-46 (461)
465 PLN02852 ferredoxin-NADP+ redu 97.4 0.00017 3.6E-09 93.5 6.5 44 19-63 24-69 (491)
466 cd05787 LbH_eIF2B_epsilon eIF- 97.4 0.00054 1.2E-08 66.2 8.5 17 1337-1353 17-33 (79)
467 TIGR02485 CobZ_N-term precorri 97.4 0.00069 1.5E-08 88.7 12.3 35 26-61 1-37 (432)
468 PRK06452 sdhA succinate dehydr 97.4 0.00042 9.1E-09 93.1 10.4 41 20-61 4-44 (566)
469 KOG1461 Translation initiation 97.4 0.00021 4.6E-09 89.5 6.8 68 1594-1667 351-423 (673)
470 PRK09077 L-aspartate oxidase; 97.4 0.0016 3.6E-08 87.1 15.9 40 19-60 6-45 (536)
471 PRK07057 sdhA succinate dehydr 97.4 0.0021 4.5E-08 86.9 16.9 40 21-61 12-51 (591)
472 PLN02985 squalene monooxygenas 97.4 0.00061 1.3E-08 90.2 11.6 36 20-56 42-77 (514)
473 PLN00128 Succinate dehydrogena 97.4 0.0015 3.3E-08 88.3 15.5 39 21-60 50-88 (635)
474 PRK09853 putative selenate red 97.4 0.00015 3.3E-09 99.7 5.8 44 19-63 537-580 (1019)
475 PRK09078 sdhA succinate dehydr 97.4 0.00084 1.8E-08 90.8 12.8 39 21-60 12-50 (598)
476 PRK05087 D-alanine--poly(phosp 97.4 0.00042 9E-09 65.8 6.9 72 1082-1153 3-77 (78)
477 PF00996 GDI: GDP dissociation 97.4 0.0017 3.8E-08 82.3 14.6 49 18-67 1-49 (438)
478 cd05635 LbH_unknown Uncharacte 97.4 0.00058 1.3E-08 69.0 8.3 56 1337-1404 30-88 (101)
479 PRK07251 pyridine nucleotide-d 97.4 0.00017 3.7E-09 94.5 5.6 43 20-63 2-45 (438)
480 TIGR01176 fum_red_Fp fumarate 97.4 0.0016 3.5E-08 87.5 14.8 40 21-61 3-44 (580)
481 cd05787 LbH_eIF2B_epsilon eIF- 97.4 0.0006 1.3E-08 65.8 7.9 72 1318-1392 6-77 (79)
482 cd05635 LbH_unknown Uncharacte 97.3 0.00066 1.4E-08 68.6 8.4 71 1574-1658 12-85 (101)
483 COG1208 GCD1 Nucleoside-diphos 97.3 0.00081 1.7E-08 84.7 11.1 39 1360-1398 256-294 (358)
484 PF01134 GIDA: Glucose inhibit 97.3 0.00043 9.4E-09 86.0 8.4 36 23-59 1-37 (392)
485 PLN02661 Putative thiazole syn 97.3 0.0002 4.4E-09 87.4 5.3 51 8-61 81-132 (357)
486 PRK07639 acyl carrier protein; 97.3 0.00073 1.6E-08 65.8 8.1 76 1079-1154 3-82 (86)
487 PRK09231 fumarate reductase fl 97.3 0.00073 1.6E-08 91.1 11.1 41 20-61 3-45 (582)
488 PRK08172 putative acyl carrier 97.3 0.00046 1E-08 66.4 6.6 74 1081-1154 4-78 (82)
489 PRK08010 pyridine nucleotide-d 97.3 0.00022 4.8E-09 93.6 5.9 43 20-63 2-45 (441)
490 PRK06467 dihydrolipoamide dehy 97.3 0.00022 4.7E-09 94.1 5.7 44 18-62 1-44 (471)
491 COG0236 AcpP Acyl carrier prot 97.3 0.00049 1.1E-08 66.4 6.5 74 1080-1153 4-78 (80)
492 PRK06116 glutathione reductase 97.3 0.00018 4E-09 94.6 4.9 43 19-63 2-44 (450)
493 PRK06854 adenylylsulfate reduc 97.3 0.0021 4.6E-08 87.0 14.9 38 21-59 11-50 (608)
494 PRK06370 mercuric reductase; V 97.3 0.00023 5E-09 94.0 5.5 44 18-63 2-45 (463)
495 PRK05329 anaerobic glycerol-3- 97.3 0.0012 2.7E-08 84.3 11.7 34 21-55 2-35 (422)
496 PTZ00188 adrenodoxin reductase 97.3 0.00034 7.4E-09 88.8 6.5 43 20-63 38-81 (506)
497 PRK07818 dihydrolipoamide dehy 97.3 0.00026 5.7E-09 93.5 5.7 43 19-63 2-44 (466)
498 PRK12775 putative trifunctiona 97.3 0.00029 6.2E-09 99.8 6.4 43 20-63 429-471 (1006)
499 KOG2415 Electron transfer flav 97.3 0.00018 4E-09 85.2 3.7 43 20-63 75-123 (621)
500 PRK08626 fumarate reductase fl 97.3 0.0011 2.4E-08 90.2 11.7 39 21-60 5-43 (657)
No 1
>TIGR02353 NRPS_term_dom non-ribosomal peptide synthetase terminal domain of unknown function. This domain is found exclusively in non-ribosomal peptide synthetases and always as the final domain in the polypeptide. This domain is roughly 700 amino acids in size and is found in polypeptides roughly twice that size.
Probab=100.00 E-value=2.5e-79 Score=811.24 Aligned_cols=613 Identities=19% Similarity=0.311 Sum_probs=461.1
Q ss_pred HHHHHHHHHhccccCCcccCCC-ccccchhhHHHHHHHHHHHHHHHHhhhhcccCchHHHHHHHHcCCEECCCcEECccc
Q 037878 1252 ATCISITIFGNSFLRPNYTLNP-EVSIWSADFVKWWALYKVHEVSCKVLAVYLRGTVFLNWWFEMLGAKLGSSVLLDTVD 1330 (2280)
Q Consensus 1252 ~~~~~~~~~~~~~l~~~~~~~p-~yp~~~~~~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~R~lGa~Ig~~v~i~~~~ 1330 (2280)
...+++++++||+++++ +|| +||+||++|+|||+++|+.++.. ...+.|++|+++|+|++|||||+||.|++..
T Consensus 51 ~~~~~~~i~~k~ll~g~--~~pg~yp~~g~~~~r~W~~~~l~~~~~---~~~~~g~~~~~~ylr~lGa~IG~~v~I~~~~ 125 (695)
T TIGR02353 51 VGRLGFAIAAKWLLVGR--WKPGTYPIWGSTYLRFWTVKRLVDAAP---TVLLSGSPLYSLYLRALGAKIGKGVDIGSLP 125 (695)
T ss_pred HHHHHHHHHHHHHhcCC--ccCCccCCCCceEEhhhHHHHHHHhCC---cccccCChHHHHHHHHcCCEECCCCEEEeee
Confidence 33567788999999999 899 99999999999999888877765 4558899999999999999999999999877
Q ss_pred cCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc------CCCCcc
Q 037878 1331 ITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS------EGGKPI 1404 (2280)
Q Consensus 1331 ~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v------~~~~~~ 1404 (2280)
+.++++++|||||.|+++|.|.+|+++++.+++++|+||+||+||++|+|.+|++|||||+||++|.| ++++.|
T Consensus 126 ~~~~~li~IG~~~~I~~~v~l~~~~~~~~~l~~g~i~IG~~~~IG~~s~I~~g~~Igd~a~vgagS~V~~g~~v~~~~~~ 205 (695)
T TIGR02353 126 PVCTDLLTIGAGTIVRKEVMLLGYRAERGRLHTGPVTLGRDAFIGTRSTLDIDTSIGDGAQLGHGSALQGGQSIPDGERW 205 (695)
T ss_pred cccCCceEECCCCEECCCCEEEcccCCCCceeecCcEECCCcEECCCCEEcCCCEECCCCEECCCCEecCCcccCCCCEE
Confidence 77899999999999999999999999999999999999999999999999999999999999999986 556677
Q ss_pred ccCCCceeeccCCCccccccccchhHHHHHhhhhhhH-----HHHHHHHHHHHHHHHHHhccCCCCchhhHHHHhhcccc
Q 037878 1405 LKSTNANYVQKGGAVSKISTHRTQDEAIHQFIGIYIV-----SFLSTLSAAITYFLYIWLSQKPASPRHFAFLCISGAFH 1479 (2280)
Q Consensus 1405 ~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1479 (2280)
.|+|++...+ ...++++.++.++ .+|...|.. ..+++++.++++..+....
T Consensus 206 -~G~PA~~~~~--~~~~~~~~~~~~~--~~~~~~~~~~~~~l~~~p~~~~~~~~~~~~~~~------------------- 261 (695)
T TIGR02353 206 -HGSPAQKTGA--DYRKVQPARPYTV--RRRLYVAGALFVVFVLLPPLAFLFAIPVAITFD------------------- 261 (695)
T ss_pred -EeeCCEEecc--ccCCCCccccchh--HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------------------
Confidence 8999998743 2333333232221 233333332 2223333333333221100
Q ss_pred chhHHHhhhhhhccccCCchhHH-HHHHHHHHH-HHHHHHHHHHHHHHHHhccc--c----ccccchhhHHHHHHHHHhh
Q 037878 1480 WLPFTIIAYATMFASVPANPAYF-AISTAVAYL-FHGLVLSYLTCILTHFLAGK--K----EEKQTHLKAWLCHRITIAC 1551 (2280)
Q Consensus 1480 ~~p~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~--~----~~~~~~~~~w~~~~~~~~~ 1551 (2280)
...|+..+....++ +.......+ ...++..++++++||++.+| | ..+.++||.|+.+|++..+
T Consensus 262 ---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~krll~~~~kpG~yp~~~~~~~r~W~~~~l~~~~ 332 (695)
T TIGR02353 262 ---------EIDWTLGPDMVGFILALVLTFVALAGFIAYTVLLLAAVRLLLNLVLKPGRYYVHSGFYYQAWTVQQLMDNS 332 (695)
T ss_pred ---------HhhhccCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCccccchhHHHHHHHHHHHHHHHH
Confidence 00111111111111 111111111 11122233367788988873 4 3466789999999998877
Q ss_pred hhhhhhhccCCchHHHHHHHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEE
Q 037878 1552 HLRFAKLLSGTEAFCIYLRLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVI 1631 (2280)
Q Consensus 1552 ~~~~~~~l~gt~~~~~~lR~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~i 1631 (2280)
......+.+++++++|||+|||||||+++|++.. ...|+|++||||++|+|+++++++.+.++.+++++++||+||||
T Consensus 333 -~~~~~~l~~s~~~~~ylRlLGAkIGk~v~i~t~~-~~~pdLltIG~g~~iad~v~~~~~~~~~g~l~~~~i~IG~~afV 410 (695)
T TIGR02353 333 -RVLLFPLYASSYIPHWYRALGAKIGKVAEISSAQ-HEVPDLTDIGEETFIADGLLMGNARLSGGWFRLGRTRIGRRSFL 410 (695)
T ss_pred -HHHHHHhcccHHHHHHHHHhCCeeCCCeEecccc-CCCCcceEECCCcEeccCcEEeeeEEeCCeEEEeeEEECCCcEE
Confidence 3455667889999999999999999999999853 45599999999999999999999999999999999999999999
Q ss_pred ccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeecccchhhHHHHHhHHHHHHHHHhhhhhhhhhhhe
Q 037878 1632 GSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTMHALDDRIEEMDMKYKKIVGNLSANLAATTLK 1711 (2280)
Q Consensus 1632 G~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~~~~~~~~ 1711 (2280)
||+++++||++||||++||++|.+|+|.++++|++|.||||.+ +++... .++
T Consensus 411 Gn~~vv~pG~~ig~~~llg~~S~~p~~~~~~~g~~w~GSPa~~-l~~~~~-~~~-------------------------- 462 (695)
T TIGR02353 411 GNSGYYPPGAKTGDNVLLGVLSMTPKDGKVREGVGWLGSPPFE-LPRRVN-RDD-------------------------- 462 (695)
T ss_pred cCceeECCCCEeCCCCEEeecccCCCCccCCCCCEEeCCCCee-CCcccc-ccc--------------------------
Confidence 9999999999999999999999999988899999999999433 221100 000
Q ss_pred ecccccccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCCcccccccccEEEeeccCCCCCCcceeee
Q 037878 1712 VKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADDDARIDARGAAIRIFSDLNGNTSSLLDLT 1791 (2280)
Q Consensus 1712 ~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~D~~~~~rG~Aik~~~~~~~~~~~~~D~~ 1791 (2280)
.+
T Consensus 463 ----------------------------------------------------------------------~~-------- 464 (695)
T TIGR02353 463 ----------------------------------------------------------------------EL-------- 464 (695)
T ss_pred ----------------------------------------------------------------------cc--------
Confidence 00
Q ss_pred cccccccccCChhhHHHHHhhccchhhhhhccCcchhhhhhhcccCCCccccceeeeeeeEEEEEeCCcEEEEEEEeecC
Q 037878 1792 LKTGNAFYARTIGDFATWLVCGLAAREEHVKRVPHIRDAVWKSLRLSDSYAEMHYYSNICRLFRFTDGQEMYVKFKLRPY 1871 (2280)
Q Consensus 1792 ~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~y~s~~~~~~~~~~g~~~~vk~~~~P~ 1871 (2280)
T Consensus 465 -------------------------------------------------------------------------------- 464 (695)
T TIGR02353 465 -------------------------------------------------------------------------------- 464 (695)
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred CCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCCCccccccccccCCCCCC
Q 037878 1872 DESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIPQDEAMQDIALDCTKPWD 1951 (2280)
Q Consensus 1872 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~d~~~~~~~~~D~t~~W~ 1951 (2280)
+ .|+
T Consensus 465 -------------------------------------------------------------------------~---~~~ 468 (695)
T TIGR02353 465 -------------------------------------------------------------------------E---ALT 468 (695)
T ss_pred -------------------------------------------------------------------------c---ccc
Confidence 0 000
Q ss_pred CCCCCceeeEEEEecCCCChhhhccccccCCcCCCccccccCCCcccccccccchhhHHHhhhHhhcCCCCchhHHHhhh
Q 037878 1952 EAEYPYIDVGEISIDQNLSTEESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEICQHLRNGEPLPESWRIFLE 2031 (2280)
Q Consensus 1952 ~~~~p~~~vg~l~i~~~~~~~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~s~~~R~~~~~~~~~~~~~~ 2031 (2280)
|+ |+. + +|.
T Consensus 469 ---------------------------~~---------p~~-----------~-----------~~~------------- 477 (695)
T TIGR02353 469 ---------------------------FE---------PDP-----------R-----------RRL------------- 477 (695)
T ss_pred ---------------------------CC---------CCH-----------H-----------HHH-------------
Confidence 00 000 0 000
Q ss_pred cccccccCCCCCccccccccccCcccchhhHHHHHHHHhhhhhhhhhHHH-HHHHHHhhcchhHHHHHhhhcccch-hhH
Q 037878 2032 QSDVKVDLSGCPMAAALEEKTEDKVTLERTWYQTLWSIFAQPLLQTVLPY-FLIGLVIFTPLKWTLFLKENKILPL-HWL 2109 (2280)
Q Consensus 2032 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2109 (2280)
.|+......+..|.+-+..+. +++.+. .+.+ +.....+.. ...
T Consensus 478 -----------------------------~~~~v~~~~~~~~~~~~~~~~~~~~~~~---~~~~---~~~~~~~~~~~~~ 522 (695)
T TIGR02353 478 -----------------------------ARKNVENLRIILPFLLVQWAMLFALVVL---DLQA---LDDYTEWGAVALL 522 (695)
T ss_pred -----------------------------HHHHHHHHHHHHHHHHHHHHHHHHHHHH---HHHH---HhhhhHHHHHHHH
Confidence 000000000111111111121 111011 1111 111111111 112
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhhccccCCcceeeeeccccchhHHHH-HHHHHHHHHhhhcCCcchHHHHHHHhcCeee
Q 037878 2110 LPMFWVSSGILAALACAAAKWVLVGKKKEGESVQIWSKGVLMDTVWQA-FRTLVGEYFVEMTSGSFLFVAWMKLMGAEIE 2188 (2280)
Q Consensus 2110 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~r~~g~~ig 2188 (2280)
++.+.++.+++++++.+++||+++||+|+|+| |+||+|+||+++.+. .+.++.+++++.+.||++++.++|++|+|||
T Consensus 523 ~~~~~~~~~~~~~~~~v~~kwll~gr~~pg~~-plws~~~wr~~~~~~~~~~~~~~~~l~~l~Gt~~~~~~lr~lGa~IG 601 (695)
T TIGR02353 523 AALILMAVGVGAFLILVERKWLVFGRLKPQEH-PLWSPFVWLHELHWKLYESVAVPNFLRPFRGTPFLPAILRLLGVKIG 601 (695)
T ss_pred HHHHHHHHHHHHHHHHHhhhheeeCCCCCccc-cccccceeehhHHHHHHHHHHhhhhhhccCCcHHHHHHHHHCCCEEC
Confidence 24567778888899999999999999999998 999999999999888 8999999999999999999999999999999
Q ss_pred ccCcEEEccceeeecCceeEEecCceEECCCceEeeecccCCCcceEeeeEEEccCeEEccceeEcCCcEeCCCceeccc
Q 037878 2189 LGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFGHIYEGDGGKVKFGKIRIGEGGFVGSRAAAMPGVRIENGGSLSSL 2268 (2280)
Q Consensus 2189 ~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~ 2268 (2280)
++|+|+++ ++.|+|+|+|| |+|+|+++|++|+|.++ |+.|+.++++||+||+||++|+|+||++|||+++|+++
T Consensus 602 --~~v~i~~~-~~~~~dlv~IG-d~~~I~~~~~i~~h~~~--~~~~~~~~v~IG~~~~IG~~a~V~~g~~IGd~a~Ig~~ 675 (695)
T TIGR02353 602 --RGVYIDGT-DLTERDLVTIG-DDSTLNEGSVIQTHLFE--DRVMKSDTVTIGDGATLGPGAIVLYGVVMGEGSVLGPD 675 (695)
T ss_pred --CCeEECCe-eccCCCCeEEC-CCCEECCCCEEEecccc--ccccccCCeEECCCCEECCCCEECCCCEECCCCEECCC
Confidence 99999998 89999999999 99999999999999999 99999999999999999999999999999999999999
Q ss_pred ceeeccccccc
Q 037878 2269 SLAMKEEIVRS 2279 (2280)
Q Consensus 2269 s~~~~~~~~~~ 2279 (2280)
|+|||||.|+.
T Consensus 676 SvV~~g~~vp~ 686 (695)
T TIGR02353 676 SLVMKGEEVPA 686 (695)
T ss_pred CEEcCCcccCC
Confidence 99999999864
No 2
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=1.9e-69 Score=859.91 Aligned_cols=607 Identities=18% Similarity=0.207 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeC
Q 037878 459 ELPGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYV 538 (2280)
Q Consensus 459 ~~~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~ 538 (2280)
+.+..+++...++++++++.+.+. |+++|+.+.+ .++||+||+++++++|+.|++. |+++|++|+|+++
T Consensus 3710 ~~~~~~~~~~~~~~~~~~~~~~~~--p~~~Av~~~~------~~~tY~eL~~~~~~la~~L~~~---gv~~~~~V~v~~~ 3778 (4334)
T PRK05691 3710 NRSERDYPLEQSYVRLFEAQVAAH--PQRIAASCLD------QQWSYAELNRAANRLGHALRAA---GVGVDQPVALLAE 3778 (4334)
T ss_pred CCccCCCccccCHHHHHHHHHHhC--CCceEEEcCC------CcccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeC
Q ss_pred CCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccc-cc
Q 037878 539 PGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWV-KN 617 (2280)
Q Consensus 539 ~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~ 617 (2280)
+|+++++++|||+|+|++|||||+++|.+| +.++++++++.+++++........................ ..
T Consensus 3779 ~s~~~~v~~lavlkaG~a~vpld~~~p~~r-------~~~il~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 3851 (4334)
T PRK05691 3779 RGLDLLGMIVGSFKAGAGYLPLDPGLPAQR-------LQRIIELSRTPVLVCSAACREQARALLDELGCANRPRLLVWEE 3851 (4334)
T ss_pred CCHHHHHHHHHHHhhCcEEeCCCCCChHHH-------HHHHHHhcCCCEEEecCcccchhhhhhcccccccccceeeecc
Q ss_pred ccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHH
Q 037878 618 SKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFT 697 (2280)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~ 697 (2280)
..........+.....++++|||+|||||||+||||+++|+|+++.+.+....++++++++++++.|++|+.++ .+++.
T Consensus 3852 ~~~~~~~~~~~~~~~~~~~~ayvi~TSGSTG~PKGV~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~s~~fd~s~-~~~~~ 3930 (4334)
T PRK05691 3852 VQAGEVASHNPGIYSGPDNLAYVIYTSGSTGLPKGVMVEQRGMLNNQLSKVPYLALSEADVIAQTASQSFDISV-WQFLA 3930 (4334)
T ss_pred cccccccccCCCCCCCCCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHHhcCCCccceEEEecCCchhHHH-HHHHH
Q ss_pred HHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHH
Q 037878 698 AMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVK 777 (2280)
Q Consensus 698 ~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~ 777 (2280)
+|..|+++++++... ..+|..+.+.++++++|++..+|+++..++...... +++||.+++|||++++++++
T Consensus 3931 ~l~~G~~l~i~~~~~-~~~~~~l~~~~~~~~vt~~~~~Ps~~~~l~~~~~~~--------~~~lr~~~~gGe~l~~~~~~ 4001 (4334)
T PRK05691 3931 APLFGARVEIVPNAI-AHDPQGLLAHVQAQGITVLESVPSLIQGMLAEDRQA--------LDGLRWMLPTGEAMPPELAR 4001 (4334)
T ss_pred HHhCCCEEEEcCccc-cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhcccc--------CCCceEEEecCCcCCHHHHH
Q ss_pred HHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeE
Q 037878 778 RFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGE 857 (2280)
Q Consensus 778 ~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GE 857 (2280)
+|.+.. ++++++|.||+|||++.++......... .....++|+|++|++++|+|+++ .++|.|.+||
T Consensus 4002 ~~~~~~-----~~~~l~n~YG~TE~t~~~~~~~~~~~~~------~~~~~~iG~p~~~~~~~v~d~~~--~~~p~g~~GE 4068 (4334)
T PRK05691 4002 QWLQRY-----PQIGLVNAYGPAECSDDVAFFRVDLAST------RGSYLPIGSPTDNNRLYLLDEAL--ELVPLGAVGE 4068 (4334)
T ss_pred HHHHhC-----CCCeEEeCccCccceeEEEEEEcccccc------cCCcCCCCCccCCCEEEEECCCC--CCCCCCCceE
Q ss_pred EEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhcc
Q 037878 858 VWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESST 936 (2280)
Q Consensus 858 L~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p 936 (2280)
|||+|++|++||+|+|++|+++|+++|+..+++|||||||+||++ ||.|+|+||+|+|||++|+||||+|||++|.++|
T Consensus 4069 L~i~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~riel~eIE~~l~~~~ 4148 (4334)
T PRK05691 4069 LCVAGTGVGRGYVGDPLRTALAFVPHPFGAPGERLYRTGDLARRRSDGVLEYVGRIDHQVKIRGYRIELGEIEARLHEQA 4148 (4334)
T ss_pred EEEecccccccccCCcccchhhcccCCCCCCCceeeccCcceeecCCCcEEEecccCCcEEeceEEecHHHHHHHHHhCC
Q ss_pred CCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCC
Q 037878 937 EHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKT 1016 (2280)
Q Consensus 937 ~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t 1016 (2280)
+|.+ |+|+...+. ....+++++....+.....+..+.++++|.+.++.++.|..++.+++||+|
T Consensus 4149 ~v~~---a~v~~~~~~-------------~~~~l~a~~~~~~~~~~~~~~~~~l~~~l~~~Lp~ymvP~~~~~~~~lP~t 4212 (4334)
T PRK05691 4149 EVRE---AAVAVQEGV-------------NGKHLVGYLVPHQTVLAQGALLERIKQRLRAELPDYMVPLHWLWLDRLPLN 4212 (4334)
T ss_pred CccE---EEEEEecCC-------------CCcEEEEEEeCCcccccchHHHHHHHHHHHhhCChhhcCcceeecccCCCC
Q ss_pred CCcccchHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCC
Q 037878 1017 TSGKIKRFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGI 1096 (2280)
Q Consensus 1017 ~sGKvdR~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~ 1096 (2280)
+||||||++ |+.+....... .....+.+++|+.|+++|+++|++
T Consensus 4213 ~~GKidr~~------------L~~~~~~~~~~------------------------~~~~~p~~~~e~~l~~iw~~vL~~ 4256 (4334)
T PRK05691 4213 ANGKLDRKA------------LPALDIGQLQS------------------------QAYLAPRNELEQTLATIWADVLKV 4256 (4334)
T ss_pred CCCcccHhh------------cCCCccccccc------------------------cccCCCCCHHHHHHHHHHHHHhCC
Q ss_pred CCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhccCCC
Q 037878 1097 PITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMKSQPQ 1160 (2280)
Q Consensus 1097 ~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~~~~~ 1160 (2280)
+ +|+.+||||++|||||+|||+++++++.+|+.+++.+||++||+++||+.++.........
T Consensus 4257 ~--~i~~~d~Ff~lGg~Sl~a~~l~~~~~~~~~~~~~~~~~f~~~t~~~la~~~~~~~~~~~~~ 4318 (4334)
T PRK05691 4257 E--RVGVHDNFFELGGHSLLATQIASRVQKALQRNVPLRAMFECSTVEELAEYIEGLAGSAIDE 4318 (4334)
T ss_pred C--cCCCCCchhhcCCcHHHHHHHHHHHHHHhCCCccHHHHhcCCCHHHHHHHHhhhccccccc
No 3
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=1.8e-69 Score=851.15 Aligned_cols=587 Identities=18% Similarity=0.252 Sum_probs=0.0
Q ss_pred CCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCC
Q 037878 461 PGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPG 540 (2280)
Q Consensus 461 ~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s 540 (2280)
...+.+...++.++++.++++. |+++|+++.+ +++||+||+++++++|+.|+++ |+++||+|+|+++|+
T Consensus 3087 ~~~~~~~~~~~~~l~~~~a~~~--p~~~Av~~~~------~~lTY~eL~~~a~~lA~~L~~~---gv~~g~~V~l~~~~s 3155 (3956)
T PRK12467 3087 TAAAYPSERLVHQLIEAQVART--PEAPALVFGD------QQLSYAELNRRANRLAHRLIAI---GVGPDVLVGVAVERS 3155 (3956)
T ss_pred CCCCCCccccHHHHHHHHHHhC--CCcceEeeCC------cccCHHHHHHHHHHHHHHHHHc---CCCCCCeEEEEeCCC
Q ss_pred HhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccc
Q 037878 541 LDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKN 620 (2280)
Q Consensus 541 ~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (2280)
+++++++|||+|+|++|||+|+.+|.+| +.++++++++++++++......+..........+......
T Consensus 3156 ~~~vv~~lavl~aGa~~vpld~~~p~~r-------l~~il~~~~~~~vlt~~~~~~~~~~~~~~~~~~~~~~~~~----- 3223 (3956)
T PRK12467 3156 VEMIVALLAVLKAGGAYVPLDPEYPRER-------LAYMIEDSGVKLLLTQAHLLEQLPAPAGDTALTLDRLDLN----- 3223 (3956)
T ss_pred HHHHHHHHHHHhhCcEeecCCCCChHHH-------HHHHHhCCCCcEEEechhhhhhcccccCCceeeecchhhc-----
Q ss_pred cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 621 LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 621 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
......+.....++|+|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|+.++ .+++.+|.
T Consensus 3224 -~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~ 3301 (3956)
T PRK12467 3224 -GYSENNPSTRVMGENLAYVIYTSGSTGKPKGVGVRHGALANHLCWIAEAYELDANDRVLLFMSFSFDGAQ-ERFLWTLI 3301 (3956)
T ss_pred -ccCCCCCcccCCCCceEEEEEccCCCCCcceeeehhHHHHHHHHHHHHhcCCCcCCEEEEecCccHhHHH-HHHHHHHh
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|+++++.+...+ +|..+++.++++++|++..+|++++.+.+...... +++||.+++|||+++++++++|.
T Consensus 3302 ~G~~l~i~~~~~~--~~~~l~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~-------~~~lr~~~~gGe~~~~~~~~~~~ 3372 (3956)
T PRK12467 3302 CGGCLVVRDNDLW--DPEELWQAIHAHRISIACFPPAYLQQFAEDAGGAD-------CASLDIYVFGGEAVPPAAFEQVK 3372 (3956)
T ss_pred CCCEEEECCcccC--CHHHHHHHHHHcCCEEEEcCHHHHHHHHhcccccC-------CCCceEEEEecCCCCHHHHHHHH
Q ss_pred HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEE
Q 037878 781 ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWI 860 (2280)
Q Consensus 781 ~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i 860 (2280)
+.+ +++.++|.||+|||++.++......... ......++|+|++|++++|+|+++ .++|+|++|||+|
T Consensus 3373 ~~~-----~~~~l~n~YG~TE~~~~~~~~~~~~~~~-----~~~~~~~iG~p~~~~~~~v~d~~~--~~vp~G~~GEL~i 3440 (3956)
T PRK12467 3373 RKL-----KPRGLTNGYGPTEAVVTVTLWKCGGDAV-----CEAPYAPIGRPVAGRSIYVLDGQL--NPVPVGVAGELYI 3440 (3956)
T ss_pred HhC-----CCCEEEeCcccchhEeeeEEEecccccc-----cCCCCCCCccccCCCEEEEECCCC--CCCCCCCCceEEE
Q ss_pred cCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCc
Q 037878 861 SSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHI 939 (2280)
Q Consensus 861 ~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~ 939 (2280)
+|+++++||+|+|++|+++|+++++..+++|||||||+|+++ ||.|+|+||+|||||++|+||+|+|||++|.++|+|.
T Consensus 3441 ~G~~v~~GY~~~~~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rIe~~EIE~~l~~~p~V~ 3520 (3956)
T PRK12467 3441 GGVGLARGYHQRPSLTAERFVADPFSGSGGRLYRTGDLARYRADGVIEYLGRIDHQVKIRGFRIELGEIEARLLQHPSVR 3520 (3956)
T ss_pred cchhhhhhccCCcccchhhccCCCCCCCCceeeccchhheecCCCcEEEeccccceEeeceEeecHHHHHHHHhhCcccc
Q ss_pred CCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCc
Q 037878 940 RPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSG 1019 (2280)
Q Consensus 940 ~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sG 1019 (2280)
+ |+|++..++ ....+++++....+.... .+.+++.+...++.++.|..++.+++||+|+||
T Consensus 3521 ~---a~v~~~~~~-------------~~~~lva~v~~~~~~~~~---~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~G 3581 (3956)
T PRK12467 3521 E---AVVLARDGA-------------GGKQLVAYVVPADPQGDW---RETLRDHLAASLPDYMVPAQLLVLAAMPLGPNG 3581 (3956)
T ss_pred e---EEEEEecCC-------------CCcEEEEEEeCCCCCccc---HHHHHHHHhccCChhhCCCeeeeeccCCCCCCC
Q ss_pred ccchHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCCCc
Q 037878 1020 KIKRFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIPIT 1099 (2280)
Q Consensus 1020 KvdR~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~~~ 1099 (2280)
||||++ ||.|..... .....+.+++|+.|+++|+++||++
T Consensus 3582 KidR~~------------L~~~~~~~~--------------------------~~~~~p~~~~e~~l~~i~~~vL~~~-- 3621 (3956)
T PRK12467 3582 KVDRKA------------LPDPDAKGS--------------------------REYVAPRSEVEQQLAAIWADVLGVE-- 3621 (3956)
T ss_pred ccchhh------------cCCCCcccc--------------------------ccccCCCCHHHHHHHHHHHHHhCCC--
Q ss_pred cccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1100 KVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1100 ~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
.|+.+||||+||||||.||+|++++++.+|+++++++||++||+++||+.+..
T Consensus 3622 ~i~~~d~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~ 3674 (3956)
T PRK12467 3622 QVGVTDNFFELGGDSLLALQVLSRIRQSLGLKLSLRDLMSAPTIAELAGYSPL 3674 (3956)
T ss_pred CCCCCcchhcccchHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHhh
No 4
>PRK12467 peptide synthase; Provisional
Probab=100.00 E-value=8.9e-69 Score=843.21 Aligned_cols=620 Identities=19% Similarity=0.245 Sum_probs=0.0
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++.+++. |+++|+.+.+ +++||+||+++++++|+.|+++ |+++|++|+++++|++++++++|
T Consensus 512 ~~~~~~~~~~a~~~--pd~~Al~~~~------~~lTY~eL~~~a~~lA~~L~~~---Gv~~g~~V~i~~~~s~~~vv~~l 580 (3956)
T PRK12467 512 DCVHQLIEAQARQH--PERPALVFGE------QVLSYAELNRQANRLAHVLIAA---GVGPDVLVGIAVERSIEMVVGLL 580 (3956)
T ss_pred CCHHHHHHHHHHHC--CCCeEEEeCC------ceEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHHHHHH
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+|+|++|||+|+.+|.+| +.++++++++++++++.......... .....+..+............. +
T Consensus 581 ail~aG~~~vpld~~~p~~r-------l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~--~ 649 (3956)
T PRK12467 581 AVLKAGGAYVPLDPEYPQDR-------LAYMLDDSGVRLLLTQSHLLAQLPVP--AGLRSLCLDEPADLLCGYSGHN--P 649 (3956)
T ss_pred HHHHhCcEEeccCCCChHHH-------HHHHHHhcCCCEEEechhhhhhcccc--cCccEEEeccccccccccCCCC--C
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++|+|||+|||||||+||||+++|+++.+.+.+....+++.+++++++++|++|+.++ .+++.+|..|+++++.
T Consensus 650 ~~~~~~~~~a~iiyTSGSTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~~G~~lv~~ 728 (3956)
T PRK12467 650 EVALDPDNLAYVIYTSGSTGQPKGVAISHGALANYVCVIAERLQLAADDSMLMVSTFAFDLGV-TELFGALASGATLHLL 728 (3956)
T ss_pred CCCCCCCCeEEEEECCCCCCCcCEEEEecHHHHHHHHHHHHhcCCCCCCEEEEecCccHhHHH-HHHHHHHhCCCEEEEc
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
++.. ..+|..+.+.++++++|++.++|+++..+.+...... ..++|.+++|||+++++++++|.+.+
T Consensus 729 ~~~~-~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~~-------~~~lr~i~~gGe~l~~~~~~~~~~~~----- 795 (3956)
T PRK12467 729 PPDC-ARDAEAFAALMADQGVTVLKIVPSHLQALLQASRVAL-------PRPQRALVCGGEALQVDLLARVRALG----- 795 (3956)
T ss_pred Cccc-cCCHHHHHHHHHHcCCeEEEcCHHHHHHHHhhhcccc-------CCcccEEEEEeecCCHHHHHHHHHhC-----
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++++++|.||+||+++.++......... .....++|+|++|++++|+|+++ .++|.|++|||+|+|+++++|
T Consensus 796 ~~~~l~n~YG~TE~~~~~~~~~~~~~~~------~~~~~~iG~p~~~~~~~i~d~~~--~~vp~G~~GEL~i~G~~v~~G 867 (3956)
T PRK12467 796 PGARLINHYGPTETTVGVSTYELSDEER------DFGNVPIGQPLANLGLYILDHYL--NPVPVGVVGELYIGGAGLARG 867 (3956)
T ss_pred CCCEEEeCcCCChhhhheeeEecccccc------cCCCCcccCCcCCCEEEEECCCC--CCCCCCCceEEEecccccchh
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEE
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVI 947 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv 947 (2280)
|+|+|++|+++|..+++..++++||||||+|+++ ||.|+|+||+|||||++|+||+|+|||++|.++|+|.+ |+|+
T Consensus 868 Yl~~p~~T~~~F~~~p~~~~g~r~yrTGDl~~~~~dG~l~~~GR~d~~vki~G~rI~~~eIE~~L~~~p~V~~---a~v~ 944 (3956)
T PRK12467 868 YHRRPALTAERFVPDPFGADGGRLYRTGDLARYRADGVIEYLGRMDHQVKIRGFRIELGEIEARLLAQPGVRE---AVVL 944 (3956)
T ss_pred hcCCccccHhhCcCCCCCCCCceeEecCceeEEcCCCcEEEeccccCeEEECCEecCHHHHHHHHHhCCCcce---EEEE
Q ss_pred eccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 948 GVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
+.++ ........+++..............+.+++.+.+.++.++.|..++.+++||+|+||||||++|.
T Consensus 945 ~~~~-----------~~~~~lva~vv~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~vP~~~~~l~~lP~t~~GKidR~~L~ 1013 (3956)
T PRK12467 945 AQPG-----------DAGLQLVAYLVPAAVADGAEHQATRDELKAQLRQVLPDYMVPAHLLLLDSLPLTPNGKLDRKALP 1013 (3956)
T ss_pred EEcC-----------CCCcEEEEEEEecccccccccccCHHHHHHHHHhhCchhcCCceEeeecccCCCCCCCcCHhhcC
Q ss_pred HHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCCCccccCCCCh
Q 037878 1028 KQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIPITKVSATDSL 1107 (2280)
Q Consensus 1028 ~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~F 1107 (2280)
+...+........| .+++|+.|+++|+++||++ .|+.+|||
T Consensus 1014 ~~~~~~~~~~~~~p-------------------------------------~~~~e~~l~~i~~~vL~~~--~i~~~d~F 1054 (3956)
T PRK12467 1014 KPDASAVQATFVAP-------------------------------------QTELEKRLAAIWADVLKVE--RVGLTDNF 1054 (3956)
T ss_pred CcccccccccccCC-------------------------------------CCHHHHHHHHHHHHHhCCC--CCCCCCCc
Q ss_pred hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCcchhhhhhhhhh
Q 037878 1108 VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMKSQPQLMTDSSFTPEPETDFDEFDMEVSKARQ 1187 (2280)
Q Consensus 1108 f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~q 1187 (2280)
|++|||||.||++++++++.+|+.+++++||++||+++||+.+........+ +..........|++..|
T Consensus 1055 f~lGgdSl~a~~l~~~~~~~~g~~l~~~~lf~~~t~~~la~~~~~~~~~~~~-----------~~~~~~~~~~~PlS~~Q 1123 (3956)
T PRK12467 1055 FELGGHSLLATQVISRVRQRLGIQVPLRTLFEHQTLAGFAQAVAAQQQGAQP-----------ALPDVDRDQPLPLSYAQ 1123 (3956)
T ss_pred hhccCccHHHHHHHHHHHHHhCCCcchHHhhccchHHHHHHHhhhhcccccc-----------cccccccccccccchHH
Q ss_pred hHHHHHHHH
Q 037878 1188 CGIWIFQLL 1196 (2280)
Q Consensus 1188 ~~~~~~~~l 1196 (2280)
.++|+++++
T Consensus 1124 ~~lw~~~~~ 1132 (3956)
T PRK12467 1124 ERQWFLWQL 1132 (3956)
T ss_pred HHHHHHHhh
No 5
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=2.1e-68 Score=852.73 Aligned_cols=623 Identities=17% Similarity=0.227 Sum_probs=0.0
Q ss_pred CCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCC
Q 037878 461 PGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPG 540 (2280)
Q Consensus 461 ~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s 540 (2280)
+..+++...++++++++++++. |+++|+.+.+ +++||+||+++++++|+.|+++ |+++|++|+++++||
T Consensus 1995 ~~~~~~~~~~~~~~~~~~a~~~--p~~~A~~~~~------~~lTy~eL~~~a~~lA~~L~~~---gv~~g~~V~l~~~~s 2063 (5163)
T PRK12316 1995 TPEAYPRGPGVHQRIAEQAARA--PEAIAVVFGD------QHLSYAELDSRANRLAHRLRAR---GVGPEVRVAIAAERS 2063 (5163)
T ss_pred CCCCCCCCCCHHHHHHHHHHhC--CCCeEEEcCC------CeEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCC
Q ss_pred HhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccc
Q 037878 541 LDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKN 620 (2280)
Q Consensus 541 ~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (2280)
+++++++|||+|+|++||||||.+|.+| +.++++++++++++++....... +................
T Consensus 2064 ~~~~~~~lAil~aGa~~vpld~~~p~~r-------l~~il~~~~~~~vl~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 2131 (5163)
T PRK12316 2064 FELVVALLAVLKAGGAYVPLDPNYPAER-------LAYMLEDSGAALLLTQRHLLERL-----PLPAGVARLPLDRDAEW 2131 (5163)
T ss_pred HHHHHHHHHHHhhceEEeecCCCCCHHH-------HHHHHHhcCCCEEEeChhhhhhc-----ccccccceEeccchhhh
Q ss_pred cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 621 LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 621 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
.......+.....++|+|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|+.++ .+++.+|.
T Consensus 2132 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~ 2210 (5163)
T PRK12316 2132 ADYPDTAPAVQLAGENLAYVIYTSGSTGLPKGVAVSHGALVAHCQAAGERYELSPADCELQFMSFSFDGAH-EQWFHPLL 2210 (5163)
T ss_pred hccCccCCCCCCCCCCeEEEEeCccCCCCCCEeEEccHHHHHHHHHHHHhcCCCCcceEEEecCchHHHHH-HHHHHHHh
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|+++++.+...+ +|..+.+.++++++|++..+|++++.+.+..... ...++||.+++|||+++++++++|.
T Consensus 2211 ~G~~~~~~~~~~~--~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~------~~~~~lr~~~~gGe~l~~~~~~~~~ 2282 (5163)
T PRK12316 2211 NGARVLIRDDELW--DPEQLYDEMERHGVTILDFPPVYLQQLAEHAERD------GRPPAVRVYCFGGEAVPAASLRLAW 2282 (5163)
T ss_pred CCCEEEeCCcccC--CHHHHHHHHHHcCCeEEEcChHHHHHHHhhhhcc------cCCcceeEEEEecccCCHHHHHHHH
Q ss_pred HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEE
Q 037878 781 ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWI 860 (2280)
Q Consensus 781 ~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i 860 (2280)
+.+ ++..++|.||||||++.++......... ......++|+|++|++++|+|+++ .++|.|++|||||
T Consensus 2283 ~~~-----~~~~l~n~YG~TE~~~~~~~~~~~~~~~-----~~~~~~~iG~p~~~~~~~i~d~~~--~~vp~g~~GEl~i 2350 (5163)
T PRK12316 2283 EAL-----RPVYLFNGYGPTEAVVTPLLWKCRPQDP-----CGAAYVPIGRALGNRRAYILDADL--NLLAPGMAGELYL 2350 (5163)
T ss_pred HhC-----CCcEEEECccchhheeeeeeeecccccc-----cCCCcCCcccccCCCEEEEECCCC--CCCCCCCeeEEEe
Q ss_pred cCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCc
Q 037878 861 SSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHI 939 (2280)
Q Consensus 861 ~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~ 939 (2280)
+|+++++||+|+|++|+++|..+++...+++||||||+||++ ||.|+|+||+|||||++|+||||+|||++|.++|+|.
T Consensus 2351 ~G~~v~~GY~~~p~~T~~~f~~~~~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~rie~~eIE~~l~~~~~v~ 2430 (5163)
T PRK12316 2351 GGEGLARGYLNRPGLTAERFVPDPFSASGERLYRTGDLARYRADGVVEYLGRIDHQVKIRGFRIELGEIEARLQAHPAVR 2430 (5163)
T ss_pred cchhhcccccCChhhhhhhccCCCCCCCCCeeEecccEEEEcCCCcEEEecCCCCeEEEcCccCChHHHHHHHhhCcccc
Q ss_pred CCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCc
Q 037878 940 RPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSG 1019 (2280)
Q Consensus 940 ~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sG 1019 (2280)
+ |+|++.+++ ....+++++...++.... .+.+++.+.+.++.++.|..++.+++||+|+||
T Consensus 2431 ~---a~v~~~~~~-------------~~~~l~a~v~~~~~~~~~---~~~l~~~l~~~Lp~~~vP~~~~~l~~lP~t~~G 2491 (5163)
T PRK12316 2431 E---AVVVAQDGA-------------SGKQLVAYVVPDDAAEDL---LAELRAWLAARLPAYMVPAHWVVLERLPLNPNG 2491 (5163)
T ss_pred e---EEEEEEecC-------------CCeEEEEEEEecCCCccC---HHHHHHHHHhhCchhcCcceEeeecccCCCCCC
Q ss_pred ccchHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCCCc
Q 037878 1020 KIKRFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIPIT 1099 (2280)
Q Consensus 1020 KvdR~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~~~ 1099 (2280)
||||++|.+............| .+++|+.|+++|+++|+++
T Consensus 2492 KidR~~L~~~~~~~~~~~~~~p-------------------------------------~~~~e~~l~~iw~~vL~~~-- 2532 (5163)
T PRK12316 2492 KLDRKALPKPDVSQLRQAYVAP-------------------------------------QEGLEQRLAAIWQAVLKVE-- 2532 (5163)
T ss_pred ccCHhhcCCCccccccccccCC-------------------------------------CCHHHHHHHHHHHHHhCCC--
Q ss_pred cccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhccCCCCCCCCCCCCCCCCCCcchh
Q 037878 1100 KVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMKSQPQLMTDSSFTPEPETDFDEFD 1179 (2280)
Q Consensus 1100 ~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1179 (2280)
.|+.+||||+||||||+||++++++++.+|+++++.++|++||+++||+.+......... .........
T Consensus 2533 ~i~~~d~Ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~~f~~~ti~~la~~l~~~~~~~~~-----------~~~~~~~~~ 2601 (5163)
T PRK12316 2533 QVGLDDHFFELGGHSLLATQVVSRVRQDLGLEVPLRILFERPTLAAFAASLESGQTSRAP-----------VLQKVTRVQ 2601 (5163)
T ss_pred ccCCCCchhhhcchHHHHHHHHHHHHHHhCCCcCHHHHhhCccHHHHhhhhhhhhhcccc-----------ccCCccccc
Q ss_pred hhhhhhhhhHHHHHHHH
Q 037878 1180 MEVSKARQCGIWIFQLL 1196 (2280)
Q Consensus 1180 ~~~~s~~q~~~~~~~~l 1196 (2280)
..+.+..|.++|+++++
T Consensus 2602 ~~pls~~Q~~lw~~~~~ 2618 (5163)
T PRK12316 2602 PLPLSHAQQRQWFLWQL 2618 (5163)
T ss_pred CCCCChHHHhHHHHccc
No 6
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=100.00 E-value=2.4e-68 Score=791.62 Aligned_cols=617 Identities=19% Similarity=0.187 Sum_probs=462.5
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCC---ceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEG---VAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVD 545 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g---~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~v 545 (2280)
.++.+++++++++ +|+++|+.+..... ...+++||+||+++++++|++|++. |+++||+|+++++|++++++
T Consensus 236 ~~l~~~~~~~a~~--~pd~~A~~~~~~~~~~~~~~~~lTY~eL~~~~~~lA~~L~~~---gv~~g~~V~i~~~~~~~~i~ 310 (1389)
T TIGR03443 236 GAIHDIFADNAEK--HPDRTCVVETPSFLDPSSKTRSFTYKQINEASNILAHYLLKT---GIKRGDVVMIYAYRGVDLVV 310 (1389)
T ss_pred CcHHHHHHHHHHh--CCCCeEEEeccccccccCCCceeeHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEecCCHHHHH
Confidence 5789999998887 48999997643210 1136899999999999999999998 89999999999999999999
Q ss_pred HHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccc---hhhcc---CC---CCCCCccccccc--
Q 037878 546 AFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYH---SAVRV---GS---WPNLPWLHTDSW-- 614 (2280)
Q Consensus 546 a~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~---~~~~~---~~---~~~~~~~~~~~~-- 614 (2280)
++|||+++|+++||+||.+|.++ +.+++++++++++++..... ..... .. ....+.+.....
T Consensus 311 ~~lA~l~~G~~~vpldp~~p~~~-------~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 383 (1389)
T TIGR03443 311 AVMGVLKAGATFSVIDPAYPPAR-------QTIYLSVAKPRALIVIEKAGTLDQLVRDYIDKELELRTEIPALALQDDGS 383 (1389)
T ss_pred HHHHHHhhCcEEeccCCCCcHHH-------HHHHHHhcCCCEEEEeccccccchhhhhhhhcccccccccceEEeccccc
Confidence 99999999999999999999998 88999999999998865321 00000 00 000110100000
Q ss_pred c-----ccc-cccc---c--ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEc
Q 037878 615 V-----KNS-KNLL---A--ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWL 683 (2280)
Q Consensus 615 ~-----~~~-~~~~---~--~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~ 683 (2280)
. ... .... . ..........++|+|||+|||||||+||||+++|+++++.+.+....+++.++|++++++
T Consensus 384 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ii~TSGSTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~ 463 (1389)
T TIGR03443 384 LVGGSLEGGETDVLAPYQALKDTPTGVVVGPDSNPTLSFTSGSEGIPKGVLGRHFSLAYYFPWMAKRFGLSENDKFTMLS 463 (1389)
T ss_pred ccccccccccccccccccccccCCCCCcCCCCCceEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEec
Confidence 0 000 0000 0 000111234679999999999999999999999999999999999999999999999999
Q ss_pred CchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccE
Q 037878 684 PQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKF 763 (2280)
Q Consensus 684 pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~ 763 (2280)
|++|+.++ .+++.+|+.|+++++.+.. ...+|..+.+.++++++|++.++|++++.+.... ..+++++|.
T Consensus 464 ~~~~d~~~-~~i~~~L~~G~~l~~~~~~-~~~~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~--------~~~~~~lr~ 533 (1389)
T TIGR03443 464 GIAHDPIQ-RDMFTPLFLGAQLLVPTAD-DIGTPGRLAEWMAKYGATVTHLTPAMGQLLSAQA--------TTPIPSLHH 533 (1389)
T ss_pred CceecchH-HHHHHHHhCCCEEEEcChh-hccCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcc--------cccCCCccE
Confidence 99999887 5789999999999887543 3458889999999999999999999988775321 135789999
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCC-CceeeccccCCCCCceEEEEc
Q 037878 764 LMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQ-GRVCCGYVDQNDPDVDIRIVN 842 (2280)
Q Consensus 764 l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~-g~~~~g~vG~p~pg~~v~Ivd 842 (2280)
+++|||++++++.+++.+.. +++.++|.||+||++++++............+. ......++|+|+++++++|+|
T Consensus 534 ~~~gGe~l~~~~~~~~~~~~-----~~~~l~n~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~~~ivd 608 (1389)
T TIGR03443 534 AFFVGDILTKRDCLRLQTLA-----ENVCIVNMYGTTETQRAVSYFEIPSRSSDSTFLKNLKDVMPAGKGMKNVQLLVVN 608 (1389)
T ss_pred EEEecccCCHHHHHHHHHhC-----CCCEEEECccCCccceeEEEEEccccccccchhhcccCcCcCCCccCCCEEEEEC
Confidence 99999999999999988764 578899999999998876654321110000000 001235689999999999999
Q ss_pred CCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccC---------------------CCCCceeecCcEEEE
Q 037878 843 PETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQN---------------------NRGRKYTRTGDLGRI 901 (2280)
Q Consensus 843 ~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~---------------------~~~~~~yrTGDlgr~ 901 (2280)
+++...++|.|++|||||+||++++||+|+|++|+++|..+++. .+++|||||||+|++
T Consensus 609 ~~~~~~~~~~G~~GEL~i~G~~v~~GY~~~p~~t~~~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~TGDlg~~ 688 (1389)
T TIGR03443 609 RNDRTQTCGVGEVGEIYVRAGGLAEGYLGLPELNAEKFVNNWFVDPSHWIDLDKENNKPEREFWLGPRDRLYRTGDLGRY 688 (1389)
T ss_pred CccCCCcCCCCCceEEEecccccchhcCCChhHhhhhccCCcccCcccccccccccccccccccCCCccceeecCCceeE
Confidence 87655667899999999999999999999999999999765321 134689999999999
Q ss_pred E-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC
Q 037878 902 I-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK 980 (2280)
Q Consensus 902 ~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~ 980 (2280)
+ ||.|+|+||+|||||++|+||+|.|||++|.+||.|.+ ++|+..+++.. +...+++++.. .....
T Consensus 689 ~~dG~l~~~GR~dd~Iki~G~rI~p~eIE~~l~~~p~V~~---a~v~~~~~~~~---------~~~lva~vv~~-~~~~~ 755 (1389)
T TIGR03443 689 LPDGNVECCGRADDQVKIRGFRIELGEIDTHLSQHPLVRE---NVTLVRRDKDE---------EPTLVSYIVPQ-DKSDE 755 (1389)
T ss_pred cCCCCEEEecccCCEEEeCcEEecHHHHHHHHHhCcchhe---eEEEEeeCCCC---------CeEEEEEEecc-Ccccc
Confidence 7 99999999999999999999999999999999999975 66666544311 11223333221 00000
Q ss_pred C------------C---------CHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCCCCCCC
Q 037878 981 P------------V---------DKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLNTVP 1039 (2280)
Q Consensus 981 ~------------~---------~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~~lp 1039 (2280)
. . ..+..+.+++.+.++++.++.|..++.+++||+|+||||||++|.+.+.+.... .
T Consensus 756 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~Lp~y~~P~~~~~~~~lP~t~~GKidr~~L~~~~~~~~~~-~- 833 (1389)
T TIGR03443 756 LEEFKSEVDDEESSDPVVKGLIKYRKLIKDIREYLKKKLPSYAIPTVIVPLKKLPLNPNGKVDKPALPFPDTAQLAA-V- 833 (1389)
T ss_pred ccccccccccccccccchhhhhhhhhhHHHHHHHHHhhCCcccCCceEEEcccCCCCCCccccHhhcCCCchhhhhh-h-
Confidence 0 0 011234455555555555555666777799999999999999864321110000 0
Q ss_pred CccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHH
Q 037878 1040 EPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVR 1119 (2280)
Q Consensus 1040 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~ 1119 (2280)
.. .. .......+.++.|+.++++|+++|+.+.+.|+.++|||++|||||+|++
T Consensus 834 ---------~~---~~---------------~~~~~~~~~~~~~~~l~~~~~~vl~~~~~~i~~~~~ff~lGgdSL~a~~ 886 (1389)
T TIGR03443 834 ---------AK---NR---------------SASAADEEFTETEREIRDLWLELLPNRPATISPDDSFFDLGGHSILATR 886 (1389)
T ss_pred ---------hc---cc---------------cccccCCCCCHHHHHHHHHHHHHhCCCccccCcCcchhhcCccHHHHHH
Confidence 00 00 0001122456788999999999999876679999999999999999999
Q ss_pred HHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1120 AAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1120 l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
++++|++.+|+++++.++|++||+++||++++...
T Consensus 887 l~~~l~~~~~~~l~~~~i~~~~ti~~la~~l~~~~ 921 (1389)
T TIGR03443 887 MIFELRKKLNVELPLGLIFKSPTIKGFAKEVDRLK 921 (1389)
T ss_pred HHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhh
Confidence 99999999999999999999999999999997654
No 7
>PRK05691 peptide synthase; Validated
Probab=100.00 E-value=8.7e-67 Score=829.52 Aligned_cols=677 Identities=29% Similarity=0.473 Sum_probs=0.0
Q ss_pred CCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCC
Q 037878 461 PGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPG 540 (2280)
Q Consensus 461 ~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s 540 (2280)
+..+++...++.+++++++++. |+++|+.+.+.++.+.+++||+||+++++++|+.|++. | ++||+|+|+++|+
T Consensus 1 ~~~~~~~~~tl~~~l~~~a~~~--p~~~a~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~---~-~~gd~V~i~~~~s 74 (4334)
T PRK05691 1 MMDAFELPLTLVQALQRRAAQT--PDRLALRFLADDPGEGVVLSYRDLDLRARTIAAALQAR---A-SFGDRAVLLFPSG 74 (4334)
T ss_pred CCCccCCCCCHHHHHHHHHHhC--CCceEEEEecCCCCcceEeeHHHHHHHHHHHHHHHHhc---C-CCCCEEEEEcCCC
Q ss_pred HhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccc
Q 037878 541 LDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKN 620 (2280)
Q Consensus 541 ~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (2280)
+++++++|||+++|+++||++|..+... ....++.++++++++++++++....+.+.... .............+...
T Consensus 75 ~~~~~~~la~l~aG~~~vp~~p~~~~~~--~~~~rl~~il~~~~~~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 151 (4334)
T PRK05691 75 PDYVAAFFGCLYAGVIAVPAYPPESARR--HHQERLLSIIADAEPRLLLTVADLRDSLLQME-ELAAANAPELLCVDTLD 151 (4334)
T ss_pred HHHHHHHHHHHHhCceEeccCCcccccc--cHHHHHHHHHHhCCCCEEEECHHHHHHHHhhh-hcccccCceEEEccccc
Q ss_pred cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCC--CCCcEEEEEcCchhhhhHHHHHHHH
Q 037878 621 LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKS--TSKTVLVSWLPQYHDMGLIGGLFTA 698 (2280)
Q Consensus 621 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~gl~~~i~~~ 698 (2280)
.............++|+|||+|||||||+||||++||+|+++++......+++ +++|++++++|++|++|++..++.+
T Consensus 152 ~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKGV~lsH~~l~~~~~~~~~~~~~~~~~~d~~l~~lp~~h~~g~~~~~~~~ 231 (4334)
T PRK05691 152 PALAEAWQEPALQPDDIAFLQYTSGSTALPKGVQVSHGNLVANEQLIRHGFGIDLNPDDVIVSWLPLYHDMGLIGGLLQP 231 (4334)
T ss_pred ccccccccCCCCCcCCeEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHhCCCCCCCceEEEeccchhhhHHHHHHHHH
Q ss_pred HHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHH
Q 037878 699 MVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKR 778 (2280)
Q Consensus 699 L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~ 778 (2280)
++.|+++++.++..+..+|..|++.++++++|+...+|..+..+........... .++++||.+++|||+++++++++
T Consensus 232 l~~G~~~v~~~~~~~~~~p~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~~~~~--~~l~~lr~~~~gge~l~~~~~~~ 309 (4334)
T PRK05691 232 IFSGVPCVLMSPAYFLERPLRWLEAISEYGGTISGGPDFAYRLCSERVSESALER--LDLSRWRVAYSGSEPIRQDSLER 309 (4334)
T ss_pred HHCCCEEEEeCcHHHhhCHHHHHHHHHHcCCEEecCCchHHHHHHHhcCHHHhcc--cccccceEEEECcccCCHHHHHH
Q ss_pred HHHHhcCCCCCCcccccccCccccccceecccCCCCcee------------ecCCCceeeccccCCCCCceEEEEcCCCC
Q 037878 779 FVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPII------------LDWQGRVCCGYVDQNDPDVDIRIVNPETS 846 (2280)
Q Consensus 779 ~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~------------~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~ 846 (2280)
|.+.+...|+....++|+||+||+++++++......... .........+++|+|+||++++|+|++++
T Consensus 310 ~~~~~~~~g~~~~~~~~~YG~TE~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~p~~~v~Ivd~~~~ 389 (4334)
T PRK05691 310 FAEKFAACGFDPDSFFASYGLAEATLFVSGGRRGQGIPALELDAEALARNRAEPGTGSVLMSCGRSQPGHAVLIVDPQSL 389 (4334)
T ss_pred HHHHhhhcCCCccccccCcchhhheeeeecccCCCCCceEeecHhHHhcCCccCCCCCceeccCCccCCCEEEEEcCCCC
Q ss_pred cccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechH
Q 037878 847 EEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSA 926 (2280)
Q Consensus 847 ~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~ 926 (2280)
..+ |.|++|||||+||++++||||+|++|+++|.. .++++||||||+|+++||.|+|+||+|||||++|+||+|+
T Consensus 390 ~~~-~~g~~GEl~v~Gp~v~~GY~~~~~~T~~~f~~----~~g~~w~rTGDlg~~~dG~l~i~GR~kd~iki~G~~v~p~ 464 (4334)
T PRK05691 390 EVL-GDNRVGEIWASGPSIAHGYWRNPEASAKTFVE----HDGRTWLRTGDLGFLRDGELFVTGRLKDMLIVRGHNLYPQ 464 (4334)
T ss_pred cCC-CCCCeEEEEecCCccchhhcCChhhhHHHhhc----CCCCceeecCCeEEEECCEEEEEeeecCEEEECCEecChH
Q ss_pred HHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEE
Q 037878 927 DVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVK 1006 (2280)
Q Consensus 927 EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~ 1006 (2280)
|||++|.+++.+.....++++.++.+ +.........+...........++.+.+++.+.+.+......+.
T Consensus 465 eIE~~l~~~~~v~~~~~~~~~~v~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~l~~~~~~~p~~~~ 534 (4334)
T PRK05691 465 DIEKTVEREVEVVRKGRVAAFAVNHQ----------GEEGIGIAAEISRSVQKILPPQALIKSIRQAVAEACQEAPSVVL 534 (4334)
T ss_pred HHHHHHHhcchhhcCCcEEEEEeccC----------CCceEEEEEEechhhcccCCHHHHHHHHHHHHHHHcCCCceEEE
Q ss_pred EecCCCccCCCCcccchHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHH
Q 037878 1007 LIKPRTMSKTTSGKIKRFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFL 1086 (2280)
Q Consensus 1007 lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l 1086 (2280)
++..++||+|++||+||++|++.|.++.+..+.. .+............+.+++|+.|
T Consensus 535 ~v~~~~lP~t~~GKi~R~~l~~~~~~~~~~~~~~-----------------------~~~~~~~~~~~~~~~~~~~e~~l 591 (4334)
T PRK05691 535 LLNPGALPKTSSGKLQRSACRLRLADGSLDSYAL-----------------------FPALQAVEAAQTAASGDELQARI 591 (4334)
T ss_pred EECCCCCCCCCCccccHHHHHHHHHhcccchhhc-----------------------cccccccccccccCCcchHHHHH
Q ss_pred HHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhccCCCCCCCCC
Q 037878 1087 KGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMKSQPQLMTDSS 1166 (2280)
Q Consensus 1087 ~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~~~~~~~~~~~ 1166 (2280)
+++|+++|+.+ .|+.++|||++|||||+||++++++++++|+.+++.|+|++||+++||+.+.+.. ....
T Consensus 592 ~~~~~~vL~~~--~i~~~~~ff~lGgdSL~a~~l~~~l~~~~g~~l~v~~i~~~~ti~~la~~l~~~~--------~~~~ 661 (4334)
T PRK05691 592 AAIWCEQLKVE--QVAADDHFFLLGGNSIAATQVVARLRDELGIDLNLRQLFEAPTLAAFSAAVARQL--------AGGG 661 (4334)
T ss_pred HHHHHHHhCCC--CCCcCCchhhcccchHHHHHHHHHHHHHhCCcCchhhhhcccchHHHHHHHHHhh--------cccc
Q ss_pred CCCCCCCCCcchhhhhhhhhhhHHHHHHHH
Q 037878 1167 FTPEPETDFDEFDMEVSKARQCGIWIFQLL 1196 (2280)
Q Consensus 1167 ~~~~~~~~~~~~~~~~~s~~q~~~~~~~~l 1196 (2280)
....+..........|++..|.++|+.+++
T Consensus 662 ~~~~~~~~~~~~~~~plS~~Q~~lw~~~~~ 691 (4334)
T PRK05691 662 AAQAAIARLPRGQALPQSLAQNRLWLLWQL 691 (4334)
T ss_pred ccccccCcCCcCCCCCCCHHHHHHHHHHHh
No 8
>PRK12316 peptide synthase; Provisional
Probab=100.00 E-value=9.6e-67 Score=833.73 Aligned_cols=604 Identities=18% Similarity=0.246 Sum_probs=0.0
Q ss_pred CCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCC
Q 037878 461 PGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPG 540 (2280)
Q Consensus 461 ~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s 540 (2280)
...+++...++++++++++++. |+++|+.+.+ +++||+||+++++++|++|++. |+++|++|+|+++||
T Consensus 4543 ~~~~~~~~~~~~~l~~~~a~~~--p~~~Av~~~~------~~lTY~eL~~~~~~lA~~L~~~---gv~~g~~V~i~~~~s 4611 (5163)
T PRK12316 4543 TDAGYPATRCVHQLVAERARMT--PDAVAVVFDE------EKLTYAELNRRANRLAHALIAR---GVGPEVLVGIAMERS 4611 (5163)
T ss_pred CCcCCCccccHHHHHHHHHHhC--CCCeEEEeCC------ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCC
Q ss_pred HhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccc
Q 037878 541 LDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKN 620 (2280)
Q Consensus 541 ~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (2280)
+++++++|||+++|+++||+||.+|.++ +.++++++++++++++......+ +................
T Consensus 4612 ~~~iv~~lavl~aG~~~vpldp~~p~~r-------l~~il~~~~~~~vl~~~~~~~~~-----~~~~~~~~~~~~~~~~~ 4679 (5163)
T PRK12316 4612 AEMMVGLLAVLKAGGAYVPLDPEYPRER-------LAYMMEDSGAALLLTQSHLLQRL-----PIPDGLASLALDRDEDW 4679 (5163)
T ss_pred HHHHHHHHHHHHhCcEEecCCCCChHHH-------HHHHHHhcCCCEEEechhhhhhc-----ccccCcceEeecchhhc
Q ss_pred cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 621 LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 621 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
.......+.....++++|||+|||||||+||||+++|+++++.+.+....++++++|++++++|++|+.++ .+++.+|.
T Consensus 4680 ~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~L~ 4758 (5163)
T PRK12316 4680 EGFPAHDPAVRLHPDNLAYVIYTSGSTGRPKGVAVSHGSLVNHLHATGERYELTPDDRVLQFMSFSFDGSH-EGLYHPLI 4758 (5163)
T ss_pred ccCCccCCccCCCCCceEEEEECCCCCCCCCEeeeccHHHHHHHHHHHHhcCCCcCCeEEEecCcchhhHH-HHHHHHHh
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|+++++.++..+ +|..+++.++++++|++.++|++++.+.+..... .++++||.+++|||+++++++++|.
T Consensus 4759 ~G~~lvi~~~~~~--~~~~l~~~i~~~~vt~~~~~Ps~~~~l~~~~~~~------~~~~~lr~v~~gGe~l~~~~~~~~~ 4830 (5163)
T PRK12316 4759 NGASVVIRDDSLW--DPERLYAEIHEHRVTVLVFPPVYLQQLAEHAERD------GEPPSLRVYCFGGEAVAQASYDLAW 4830 (5163)
T ss_pred CCCEEEEcCcccC--CHHHHHHHHHHcCCEEEEcCHHHHHHHHhhhccc------cCCCCccEEEEecccCCHHHHHHHH
Q ss_pred HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEE
Q 037878 781 ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWI 860 (2280)
Q Consensus 781 ~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i 860 (2280)
+.+ ++++++|.||+||+++.++......... ......++|+|++|++++|+|+++ ..+|.|++|||+|
T Consensus 4831 ~~~-----~~~~l~n~YG~TE~~~~~~~~~~~~~~~-----~~~~~~~iG~p~~~~~~~i~d~~~--~~~p~g~~GEl~i 4898 (5163)
T PRK12316 4831 RAL-----KPVYLFNGYGPTETTVTVLLWKARDGDA-----CGAAYMPIGTPLGNRSGYVLDGQL--NPLPVGVAGELYL 4898 (5163)
T ss_pred HhC-----CCCEEEecccCccceEEEEEEEcccccc-----cCCCCCcccccccCCEEEEECCCC--CcCCCCCCceEEE
Q ss_pred cCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCc
Q 037878 861 SSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHI 939 (2280)
Q Consensus 861 ~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~ 939 (2280)
+|+++++||||+|++|+++|.++++..++.+||||||+|+++ ||.++|+||+|+|||++|+||+|+|||++|.++|+|.
T Consensus 4899 ~G~~v~~GY~~~~~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~d~~iki~G~ri~~~eIE~~l~~~p~V~ 4978 (5163)
T PRK12316 4899 GGEGVARGYLERPALTAERFVPDPFGAPGGRLYRTGDLARYRADGVIDYLGRVDHQVKIRGFRIELGEIEARLREHPAVR 4978 (5163)
T ss_pred CCcccchhhcCChhhhhhhccCCCCCCCCcceeecCceeEECCCCcEEEeccccceEeeccEeecHHHHHHHHHhCCCcc
Q ss_pred CCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC--HHHHHHHHHHHHHhcCcceeEEEEecCCCccCCC
Q 037878 940 RPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD--KDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTT 1017 (2280)
Q Consensus 940 ~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~--~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~ 1017 (2280)
+ |+|++.++. .+...+++++........... .++.+.+++.+.+.++.++.|..++.+++||+|+
T Consensus 4979 ~---a~v~~~~~~----------~~~~l~a~v~~~~~~~~~~~~~~~~~~~~l~~~l~~~lp~y~vP~~~~~~~~lP~t~ 5045 (5163)
T PRK12316 4979 E---AVVIAQEGA----------VGKQLVGYVVPQDPALADADEAQAELRDELKAALRERLPEYMVPAHLVFLARMPLTP 5045 (5163)
T ss_pred e---EEEEEeeCC----------CCcEEEEEEeCCccccccccccchhhHHHHHHHHhccCchhhCCcceeecccCCCCC
Q ss_pred CcccchHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCC
Q 037878 1018 SGKIKRFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIP 1097 (2280)
Q Consensus 1018 sGKvdR~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~ 1097 (2280)
||||||++|.+.+.+.....+..| .+++|+.++++|+++|+++
T Consensus 5046 ~GKvdR~~L~~~~~~~~~~~~~~~-------------------------------------~~~~e~~l~~i~~~vL~~~ 5088 (5163)
T PRK12316 5046 NGKLDRKALPQPDASLLQQAYVAP-------------------------------------RSELEQQVAAIWAEVLQLE 5088 (5163)
T ss_pred CcccChhhcCCccccccccccCCC-------------------------------------CcHHHHHHHHHHHHHhCCC
Q ss_pred CccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhccCCC
Q 037878 1098 ITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMKSQPQ 1160 (2280)
Q Consensus 1098 ~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~~~~~ 1160 (2280)
+|+.++|||++|||||.||+|++++++.+|+++++.+||++||+++||++++.........
T Consensus 5089 --~i~~~~~Ff~lGgdSl~a~~l~~~l~~~~g~~l~~~~lf~~pti~~la~~~~~~~~~~~~~ 5149 (5163)
T PRK12316 5089 --RVGLDDNFFELGGHSLLAIQVTSRIQLELGLELPLRELFQTPTLAAFVELAAAAGSGDDEK 5149 (5163)
T ss_pred --CCCCCCChhhccchHHHHHHHHHHHHHHcCCCCCHHHHHcCCCHHHHHHHHHhcccccccc
No 9
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=100.00 E-value=6.8e-66 Score=763.84 Aligned_cols=588 Identities=19% Similarity=0.292 Sum_probs=459.5
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++.+++. |+++|+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+.++++++|
T Consensus 458 ~~l~~~~~~~~~~~--p~~~Al~~~~------~~~Ty~eL~~~~~~la~~L~~~---g~~~g~~V~l~~~~~~~~i~~~l 526 (1296)
T PRK10252 458 TTLSALVAQQAAKT--PDAPALADAR------YQFSYREMREQVVALANLLRER---GVKPGDSVAVALPRSVFLTLALH 526 (1296)
T ss_pred CCHHHHHHHHHHhC--CCCeEEEcCC------CcEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHHHHHH
Confidence 57889998888774 8999987532 4799999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+++|+++||+|+.+|.++ +..+++++++++++++.......... +.......+.... ......
T Consensus 527 a~~~~G~~~vpld~~~p~~~-------~~~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~------~~~~~~ 591 (1296)
T PRK10252 527 AIVEAGAAWLPLDTGYPDDR-------LKMMLEDARPSLLITTADQLPRFADV--PDLTSLCYNAPLA------PQGAAP 591 (1296)
T ss_pred HHHHhCCEEEecCccCHHHH-------HHHHHHhCCCCEEEECcchhhhcccC--CCceeeecccccc------cccCCC
Confidence 99999999999999999998 88999999999999986544332211 1111111111000 000011
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++++|||+|||||||+||||+++|+++++.+.+....+++.++|++++++|++|+.++ .+++.+|..|+++++.
T Consensus 592 ~~~~~~~~~a~i~~TSGSTG~PKgV~~~h~~l~~~~~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~~~ 670 (1296)
T PRK10252 592 LQLSQPHHTAYIIFTSGSTGRPKGVMVGQTAIVNRLLWMQNHYPLTADDVVLQKTPCSFDVSV-WEFFWPFIAGAKLVMA 670 (1296)
T ss_pred CCCCCCCCeEEEEECCCCCCCCCEEEeccHHHHHHHHHHHHhcCCCCCCEEEEeCCcchhhhH-HHHHHHHhCCCEEEEC
Confidence 122367899999999999999999999999999999999999999999999999999999997 5789999999999987
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
++.. ..+|..+.+.++++++|++..+|+++..+++...... ....++++|.+++|||+++++++++|.+.+
T Consensus 671 ~~~~-~~~~~~~~~~i~~~~vt~~~~~Ps~l~~l~~~~~~~~---~~~~~~~lr~i~~gGe~l~~~~~~~~~~~~----- 741 (1296)
T PRK10252 671 EPEA-HRDPLAMQQFFAEYGVTTTHFVPSMLAAFVASLTPEG---ARQSCASLRQVFCSGEALPADLCREWQQLT----- 741 (1296)
T ss_pred Chhc-cCCHHHHHHHHHHcCCeEEEeCHHHHHHHHhhhcccc---ccccCCCccEEEEecCCCCHHHHHHHHhcC-----
Confidence 6543 4589999999999999999999999988876533221 113467899999999999999999998753
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
+++++|.||+||+++.++......... .. ......++|+|++|++++|+|+++ +.+|.|+.|||+|+|+++++|
T Consensus 742 -~~~l~n~YG~TE~~~~~~~~~~~~~~~--~~-~~~~~~~iG~p~~~~~~~i~d~~~--~~~~~g~~Gel~i~g~~~~~G 815 (1296)
T PRK10252 742 -GAPLHNLYGPTEAAVDVSWYPAFGEEL--AA-VRGSSVPIGYPVWNTGLRILDARM--RPVPPGVAGDLYLTGIQLAQG 815 (1296)
T ss_pred -CCEEEeCCCcchhhheeeeeecccccc--cc-cCCCCCCcccccCCCEEEEECCCC--CCCCCCCceEEEecccccchh
Confidence 567999999999998766543211110 00 011235689999999999999764 456899999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEE
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVI 947 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv 947 (2280)
|+|+|+.|+++|..+++. ++++||||||+|+++ ||.++|+||+|||||++|+||+|.|||++|.++|+|.+ ++|+
T Consensus 816 Y~~~~~~t~~~f~~~~~~-~~~~~y~TGDl~~~~~~G~l~~~GR~d~~ik~~G~ri~~~eIE~~l~~~~~v~~---a~v~ 891 (1296)
T PRK10252 816 YLGRPDLTASRFIADPFA-PGERMYRTGDVARWLDDGAVEYLGRSDDQLKIRGQRIELGEIDRAMQALPDVEQ---AVTH 891 (1296)
T ss_pred hCCCcccchhhcccCCCC-CCCEEEecCceEEEcCCCcEEEecccCCeEEEeeEEecHHHHHHHHHhCccccc---eEEE
Confidence 999999999999887654 567999999999997 99999999999999999999999999999999999976 4444
Q ss_pred eccccccccccccccCC-CCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHH
Q 037878 948 GVPEEVLSTKGISVSDG-SDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFE 1025 (2280)
Q Consensus 948 ~~~~~~~~~~~~~~~~~-~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~ 1025 (2280)
......-.. ..++ ...+++++ ...+... ..++.+.++++|+. + +.|..++.+++||+|+||||||++
T Consensus 892 ~~~~~~~~~----~~~~~~~lva~v~---~~~~~~~~~~~l~~~l~~~Lp~-~---~~P~~~~~~~~lP~t~~GKidr~~ 960 (1296)
T PRK10252 892 ACVINQAAA----TGGDARQLVGYLV---SQSGLPLDTSALQAQLRERLPP-H---MVPVVLLQLDQLPLSANGKLDRKA 960 (1296)
T ss_pred EEecccccc----CCCCccEEEEEEE---cCCCCCCCHHHHHHHHHhhCch-h---cCCcEEEEecCCCCCCCcChhHHh
Confidence 321000000 0011 12233332 2222222 24555666655554 4 444555666999999999999987
Q ss_pred HHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCCCccccCCC
Q 037878 1026 CLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIPITKVSATD 1105 (2280)
Q Consensus 1026 L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~~~~i~~~~ 1105 (2280)
| +.|..... .....+.+++|+.++++|+++||.+ .++.++
T Consensus 961 L------------~~~~~~~~--------------------------~~~~~~~~~~e~~l~~~~~~~l~~~--~~~~~~ 1000 (1296)
T PRK10252 961 L------------PLPELKAQ--------------------------VPGRAPKTGTETIIAAAFSSLLGCD--VVDADA 1000 (1296)
T ss_pred c------------CCCccccc--------------------------ccCCCCCCHHHHHHHHHHHHHhCCC--CCCCCc
Confidence 4 22210000 0011245678899999999999997 789999
Q ss_pred ChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1106 SLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1106 ~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
|||++|||||++++++++|++.+|+++++.++|++||+++||+++++.
T Consensus 1001 ~ff~lGg~Sl~a~~l~~~l~~~~~~~l~~~~~~~~pti~~la~~l~~~ 1048 (1296)
T PRK10252 1001 DFFALGGHSLLAMKLAAQLSRQFARQVTPGQVMVASTVAKLATLLDAE 1048 (1296)
T ss_pred CHHHcCCChHHHHHHHHHHHHHhCCCCCHHHHhcCCCHHHHHHHHhcc
Confidence 999999999999999999999999999999999999999999999764
No 10
>PRK06060 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-65 Score=709.10 Aligned_cols=609 Identities=18% Similarity=0.231 Sum_probs=447.6
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
++.+++.+.+.....|+++|+... +.+||+||+++++++|+.|.++ |+++||+|+++++|++++++++||
T Consensus 5 ~~~~~~~~~a~~~~~pd~~a~~~~-------~~~Ty~eL~~~~~~lA~~L~~~---g~~~g~~V~i~~~~~~~~~~~~la 74 (705)
T PRK06060 5 NLAGLLAEQASEAGWYDRPAFYAA-------DVVTHGQIHDGAARLGEVLRNR---GLSSGDRVLLCLPDSPDLVQLLLA 74 (705)
T ss_pred CHHHHHHHHHhhccCCCceEEEec-------CceeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHH
Confidence 678888877765335899998631 2689999999999999999998 899999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccccccccc
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCF 629 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (2280)
|+++|++++|+++..+.++ +.++++++++++++++.......... ............ ........
T Consensus 75 ~~~aG~~~vpi~p~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~-----~~~~~~~~~~~~---~~~~~~~~ 139 (705)
T PRK06060 75 CLARGVMAFLANPELHRDD-------HALAARNTEPALVVTSDALRDRFQPS-----RVAEAAELMSEA---ARVAPGGY 139 (705)
T ss_pred HHHhCcEEEecCCCCCHHH-------HHHHHhcCCCcEEEEchHHhhhhccc-----ccchhhhhhhhc---cccCCCCC
Confidence 9999999999999999998 88999999999999976543322110 001111110000 00001112
Q ss_pred CCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHH-HHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 630 TESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMR-KRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 630 ~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~-~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
....++++|||+|||||||+||||+++|+++.+++.... ..+++.+++++++++|++|++++...++.++..|+++++.
T Consensus 140 ~~~~~~~~a~il~TSGSTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~~~~~~~l~~G~~~v~~ 219 (705)
T PRK06060 140 EPMGGDALAYATYTSGTTGPPKAAIHRHADPLTFVDAMCRKALRLTPEDTGLCSARMYFAYGLGNSVWFPLATGGSAVIN 219 (705)
T ss_pred CCCCCCCeEEEEECCCCCCCCcEEEEccccHHHHHHHHHHHhhCCCCcceeEEeccchhhcchhHHHHHHHhcCCEEEEe
Confidence 234578999999999999999999999999988877654 4678889999999999999999877888999999999886
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
+. .+ ++..+...++++++|++.++|+++..+++... ..+++++|.+++|||++++++.++|.+.+
T Consensus 220 ~~-~~--~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~-------~~~~~slr~i~~gGe~l~~~~~~~~~~~~----- 284 (705)
T PRK06060 220 SA-PV--TPEAAAILSARFGPSVLYGVPNFFARVIDSCS-------PDSFRSLRCVVSAGEALELGLAERLMEFF----- 284 (705)
T ss_pred CC-CC--CHHHHHHHHHhcCCeEEeeHHHHHHHHHHhcc-------cccccceeEEEEecCcCCHHHHHHHHHHc-----
Confidence 53 22 78888999999999999999999988775422 13578999999999999999999998875
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++++++|.||+||++.++...... ....+++|+|+++++++|+|+++ ..++.|+.|||||+|+++++|
T Consensus 285 ~~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~iG~p~~~~~v~i~d~~g--~~~~~g~~GEl~i~g~~v~~G 352 (705)
T PRK06060 285 GGIPILDGIGSTEVGQTFVSNRVD----------EWRLGTLGRVLPPYEIRVVAPDG--TTAGPGVEGDLWVRGPAIAKG 352 (705)
T ss_pred CCCceEeeeeccccCceEEeccCC----------CCCcCcccccCCCcEEEEECCCC--CCCCCCCceEEEEccchhhhh
Confidence 357899999999998654332111 11236789999999999999875 345799999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEE
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVI 947 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv 947 (2280)
|+|+|+.+. .+++||+|||+|+++ ||+++|+||+|||||++|+||+|.|||++|.+|++|.+ |+|+
T Consensus 353 Y~~~~~~~~----------~~~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~---a~vv 419 (705)
T PRK06060 353 YWNRPDSPV----------ANEGWLDTRDRVCIDSDGWVTYRCRADDTEVIGGVNVDPREVERLIIEDEAVAE---AAVV 419 (705)
T ss_pred hhCCCcccc----------cCCCcEECCeeEEECCCceEEEecccCceEEECCEEECHHHHHHHHHhCCCeeE---EEEE
Confidence 999998642 135899999999997 99999999999999999999999999999999999875 8888
Q ss_pred eccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 948 GVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
+++++..+ ....++++ ..++...+.+..+.+++.+.+.++.++.|..++.+++||+|+|||+||++|+
T Consensus 420 ~~~~~~~~----------~~~~a~vv--~~~~~~~~~~~~~~i~~~l~~~L~~~~~P~~i~~v~~iP~t~~GKidr~~L~ 487 (705)
T PRK06060 420 AVRESTGA----------STLQAFLV--ATSGATIDGSVMRDLHRGLLNRLSAFKVPHRFAVVDRLPRTPNGKLVRGALR 487 (705)
T ss_pred eecCccCC----------eeEEEEEE--eccccCcChHHHHHHHHHHHHhCCCCcCCcEEEEeecCCCCcchhhHHHHHH
Confidence 87764321 22222222 2222222222234444444444444445555666699999999999999998
Q ss_pred HHhhcCCCCCCCCccc--hhcccccccccccccCCCCCCC--CCCCCcccccCCChhHHHHHHHHHHHHHhCCC-Ccccc
Q 037878 1028 KQFVDGTLNTVPEPLF--TKRKLTRSFTTGTCKEGRTPRP--QLVSSPVASKKMSNKDIVEFLKGLVSEQTGIP-ITKVS 1102 (2280)
Q Consensus 1028 ~~~~~~~~~~lp~p~~--~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~-~~~i~ 1102 (2280)
+.+.......+..... ...................... ................+++.+++.|+++||.+ ++.|+
T Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~v~~~~a~vl~~~~~~~i~ 567 (705)
T PRK06060 488 KQSPTKPIWELSLTEPGSGVRAQRDDLSASNMTIAGGNDGGATLRERLVALRQERQRLVVDAVCAEAAKMLGEPDPWSVD 567 (705)
T ss_pred hhccchhhhhhhccCcccCchhhhccccCCCcccCCCCCccHHHHHHHhhCcHHHHHHHHHHHHHHHHHHhCCCChhhCC
Confidence 8753221100000000 0000000000000000000000 00000000001112334568999999999985 45699
Q ss_pred CCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhh
Q 037878 1103 ATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVM 1155 (2280)
Q Consensus 1103 ~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~ 1155 (2280)
.+++||++|||||+++++.++|++.+|+.++..++|+|||+.+|+++|.....
T Consensus 568 ~~~~f~~lG~dSl~av~l~~~l~~~~g~~l~~~~~~~~pt~~~la~~l~~~~~ 620 (705)
T PRK06060 568 QDLAFSELGFDSQMTVTLCKRLAAVTGLRLPETVGWDYGSISGLAQYLEAELA 620 (705)
T ss_pred CCCChhhcCchHHHHHHHHHHHHHHhCCCCCceeeecCCCHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999999987553
No 11
>KOG0047 consensus Catalase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=8.1e-68 Score=597.05 Aligned_cols=295 Identities=23% Similarity=0.355 Sum_probs=283.5
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCccc-CCCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIF-HPGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f-~~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+|+++|.+||||.||+|+|||++|+.+++++.+| +.||++|+++|||+++|+.+ |+++|+||||+|||++ +|+
T Consensus 64 ERIPERVvHAkGagA~GyFEvThDIt~~~~a~~f~kvgk~Tp~~vRFSTV~gE~GSaDT~RDPRGFAvKFYTe-eGn--- 139 (505)
T KOG0047|consen 64 ERIPERVVHAKGAGAFGYFEVTHDITKYCKADIFSKVGKQTPVLVRFSTVGGESGSADTARDPRGFAVKFYTE-EGN--- 139 (505)
T ss_pred hcCchhhhccccCcceeEEEeechHHHHHHHHHHhhccccCceEEEEEeecccCCCcccccCCCcceEEEEec-ccc---
Confidence 7899999999999999999999999999999999 56999999999999999976 9999999999999998 777
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhccCc-------------chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKRVP-------------HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
||||+||+||||+||+.+|+.|+|+++++|++++++.. |+...+++.+++|++|++|+.||.|+|+
T Consensus 140 -~DlVgNNtPVFFiRDpikFP~fIHtqKrNPQthlkD~~m~wDf~t~~pEslHqv~~lFsDrGtP~~yrhM~Gyg~hTyk 218 (505)
T KOG0047|consen 140 -WDLVGNNTPVFFIRDPIKFPSFIHTQKRNPQTHLKDPDMFWDFLTLRPESLHQVMFLFSDRGTPDGYRHMNGYGSHTYK 218 (505)
T ss_pred -ceeecCCcceEEeecccccchhhhccCCCchhcccCcchhHHHhhcCHhhhhheeeeeccCCCCcccccccccccceEE
Confidence 99999999999999999999999999999999998765 6667778888999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+|||||++|.||+++|+.++|.+.+..+| ||..+||+++|++|++++|.++||+|++
T Consensus 219 ~vNk~G~~~YvkfH~ktdqGiKnLt~e~A~~l~gs~p---------------dya~~DLf~aI~~gnyPsW~~yIQvMt~ 283 (505)
T KOG0047|consen 219 MVNKEGKAHYVKFHFKTDQGIKNLTVEEAARLAGSDP---------------DYAIRDLFNAIENGNYPSWTMYIQVMTP 283 (505)
T ss_pred EEccCCceEEEEEEEecCCCcccCCHHHHHHhcCCCc---------------cHHHHHHHHHHHcCCCCceEEEEEeeCH
Confidence 9999999999999999999999999999998875555 5999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
++++.++|+++|.||.||++++|+++||+|+||+|++| +|+||++|+|+|++|||++|+ |++||+|.++|.
T Consensus 284 ~qa~K~~fnpfDvTKvWP~~~~PL~~VGk~vLn~Np~NyFaevEQ~AF~Pa~~VPGIe~S~-------Dk~LQ~RlFSY~ 356 (505)
T KOG0047|consen 284 EQAEKFRFNPFDVTKVWPHKDYPLIPVGKMVLNRNPDNYFAEVEQAAFSPAHIVPGIEPSP-------DKMLQGRLFSYP 356 (505)
T ss_pred hHhhcCCCCccceeccccCcCccccccceEEecCCchHHHHHHHHhccCccccCCCcccCC-------chhheeeeeccC
Confidence 99999999999999999999999999999999999999 999999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
+++++|+|.+ |+|++|| ||.
T Consensus 357 DthRHRLGpN--------y~QlPVN-----cPy 376 (505)
T KOG0047|consen 357 DTHRHRLGPN--------YLQLPVN-----CPY 376 (505)
T ss_pred cccccccCCC--------eeecccC-----CCc
Confidence 9999999999 7899999 987
No 12
>COG0753 KatE Catalase [Inorganic ion transport and metabolism]
Probab=100.00 E-value=5.8e-66 Score=599.95 Aligned_cols=300 Identities=23% Similarity=0.382 Sum_probs=284.6
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||.||+|+|++++++++++++.+|+ +||++|+++|||++.|.++ |+.+|+||||+|||++ +||
T Consensus 56 ErIPERvvHAkG~GA~G~F~~t~dis~yT~A~~f~e~Gk~TP~fvRFSTV~g~~gsaDt~RD~RGFA~KfYTe-eGN--- 131 (496)
T COG0753 56 ERIPERVVHAKGSGAHGYFEVTEDISKYTKAKLFQEVGKKTPVFVRFSTVAGERGSADTVRDVRGFALKFYTE-EGN--- 131 (496)
T ss_pred ccCcchheecccccceeEEEeccchHhhhcchhhcccCcccceEEEEEeccCCCCCcccccccccceEEEeec-ccc---
Confidence 78999999999999999999999999999999996 7999999999999999866 9999999999999998 777
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhccC----------c---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKRV----------P---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~~----------~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
||||+||+||||+||+.+|++|+|+++++|.+.+.+. | |+...+.+.+++|.||++|++||+|+|+
T Consensus 132 -wDlVGNNtPVFFirDa~KFPdfiH~~Kp~P~t~l~~~~~~wDF~s~~PES~H~vt~l~SDrGiP~syR~M~GfgvHtf~ 210 (496)
T COG0753 132 -WDLVGNNTPVFFIRDAIKFPDFIHAQKPDPRTNLRDADTFWDFWSLNPESLHQVTWLMSDRGIPASYRHMEGFGVHTFK 210 (496)
T ss_pred -ceeeccCcceEEeeChhhchhhhhhcCCCCCcccccchhhhhhhhcCcHHHHHHHHHhcCCCCChhhhcCCCccceeEE
Confidence 9999999999999999999999999999998887765 2 7778888888999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+||.+..+.++ ||.++||++.|++|++++|+|+||++++
T Consensus 211 ~vN~~Ge~~~VKfH~k~~qGik~Lt~~EA~ki~g~d~---------------d~~~~dL~eaIe~Gd~P~W~l~VQvm~~ 275 (496)
T COG0753 211 FVNAKGKRVWVKFHFKPKQGIKNLTWDEAAKLAGKDP---------------DYHQRDLYEAIENGDFPEWDLYVQVMPE 275 (496)
T ss_pred EEcCCCCEEEEEEEEEeccccccCCHHHHHHHhccCc---------------cHHHHHHHHHHHcCCCCceEEEEEecCh
Confidence 9999999999999999999999999999998865444 5999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|.+.++|+++|+||.||++++|++.||+|+||+|++| +++||.+|+|.|+++||++|+ ||+||+|.++|.
T Consensus 276 ~da~k~~f~~~D~TKvWp~~~~P~~~VG~m~LnrNpdN~FaE~EQaAF~p~nlVPGi~fS~-------D~lLQgRlFsY~ 348 (496)
T COG0753 276 EDAEKFDFDPLDLTKLWPEEDYPLIEVGTMVLNRNPDNFFAEVEQAAFAPGNLVPGIDFSP-------DPLLQGRLFSYG 348 (496)
T ss_pred hHhhcCCCCCCccccccccccCCceEeeEEEEccCccchhhhhhhhccccccCCCCCCCCC-------Chhhhhccccch
Confidence 99999999999999999999999999999999999999 999999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCccc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPMAA 2046 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2046 (2280)
++|++|+|.++ .+++||.|.||+++
T Consensus 349 DtqryRlG~N~----------~qlPvN~P~~p~~~ 373 (496)
T COG0753 349 DTQRYRLGPNY----------HQIPVNRPKCPVHN 373 (496)
T ss_pred hhhHhhcCCCc----------ccccCCCCCCcccc
Confidence 99999999885 45677799999965
No 13
>COG0365 Acs Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases [Lipid metabolism]
Probab=100.00 E-value=2.5e-62 Score=618.52 Aligned_cols=497 Identities=22% Similarity=0.295 Sum_probs=396.9
Q ss_pred HHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHc
Q 037878 474 YLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRA 553 (2280)
Q Consensus 474 ~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~a 553 (2280)
.++++.... .+++.|++|.++++.. +++||+||.++++++|+.|++.+ |+ +||||++++|+.+|.++++|||+++
T Consensus 14 ~~dr~~~~~-~~~~~aii~~~e~~~~-~~~Ty~~L~~~v~r~A~~L~~~~--gv-kGDrV~iymp~~pe~~~a~LA~~ri 88 (528)
T COG0365 14 ALDRHLEAD-RPDDTAIIFDGEDGLF-RELTYGDLRREVARLANALKDLG--GV-KGDRVAIYMPNSPEAVIALLATARI 88 (528)
T ss_pred hhhhhhhcc-CCCceEEEEEcCCCCc-eEEEHHHHHHHHHHHHHHHHHhC--CC-CCCEEEEEcCCCHHHHHHHHHHHHc
Confidence 345554432 2689999999887655 89999999999999999998753 78 9999999999999999999999999
Q ss_pred CCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCC-CC-----ccccccccccccc--ccccc
Q 037878 554 KVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPN-LP-----WLHTDSWVKNSKN--LLAEN 625 (2280)
Q Consensus 554 Ga~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~~~~~--~~~~~ 625 (2280)
||+++|+.+..+.+. +...+++++++++++.+......+...... .. .+..........+ .....
T Consensus 89 GAI~~~vf~~f~~~a-------l~~Ri~d~~~k~vit~d~~~~~gk~~~~~~~~~~~~~~~iv~~r~~~~~~~~~~~~~~ 161 (528)
T COG0365 89 GAIPAVVSPGLSAEA-------VADRIADLGPKVLIADDGTFRNGKEIALLEDADAVLSSVVVVPRLGLWYDEAVEKASE 161 (528)
T ss_pred CCEEeecccCCCHHH-------HHHHHHccCCCEEEEecccccccccccchhHHHHhhcceEEeccccccHHHHhhccCC
Confidence 999999999998877 889999999999999876544322111000 00 0000000000000 01111
Q ss_pred ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHH-HHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccce
Q 037878 626 VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKL-MRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGST 704 (2280)
Q Consensus 626 ~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~-~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~ 704 (2280)
..+..+.+++|+++|+|||||||+||||+|+|++++..... ....+.+.++|++++..++.|.+|....++.+|..|++
T Consensus 162 ~~~~~~~~~~dpl~ilYTSGTTG~PKgv~H~~gg~l~~~~~~~~~~~~~~~~Dv~w~~ad~GW~~g~~~~v~~pL~~Gat 241 (528)
T COG0365 162 KFEFEPLPADDPLFLLYTSGTTGKPKGIVHSHGGYLVEHRLTAKFHGDLLPGDRFWNSSDPGWIYGLWYSVFSPLASGAT 241 (528)
T ss_pred CCCccccCCCCeEEEEeCCCCCCCCceEEEeCchHHHHHHHHHHHhhCCCCCCEEEeCCCchhhhCchHHHHHHHhcCCe
Confidence 22234478899999999999999999999999986665544 44567888999999999999999999999999999999
Q ss_pred EEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhc
Q 037878 705 AILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTR 784 (2280)
Q Consensus 705 ~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~ 784 (2280)
.++++...+- +|..++++++++++|++.+.|+++++|.+... ...+|+++||.+.+.|||++++..+++.+.+
T Consensus 242 ~~~~eg~p~~-~~~~~~~~ie~~~vt~~~tsPT~~R~l~~~g~-----~~~~dlssLr~~~SaGEPLnpe~~~w~~~~~- 314 (528)
T COG0365 242 TVLYDGRPFY-SPERLWEALEKYKVTIFGTSPTFLRRLMKLGL-----GEPYDLSSLRVLGSAGEPLNPEAFEWFYSAL- 314 (528)
T ss_pred EEEeCCCCCC-CHHHHHHHHHHhCCceEeeCHHHHHHHHhcCC-----cccccchhheeeeccCCCCCHHHHHHHHHHh-
Confidence 9999887766 79999999999999999999999999986543 2348899999999999999999999999985
Q ss_pred CCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCC-
Q 037878 785 PFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSP- 863 (2280)
Q Consensus 785 ~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp- 863 (2280)
++.+.+.||+||++.+...... + ...++.|.|+||+++.|+|++ + +.+++|+ |+|+|+.|
T Consensus 315 -----g~~i~d~~gqTEtg~~~~~~~~---~--------~~~g~~g~p~pG~~~~vvdd~-g-~~~~~~~-G~Lvi~~~~ 375 (528)
T COG0365 315 -----GVWILDIYGQTETGMGFIAGRP---P--------VKNGSSGLPLPGYAVRRVDDE-G-NPVPPGV-GELVVRLPW 375 (528)
T ss_pred -----CCCEeccccccccCccccCCCC---C--------cCCCCCCCCCCCceeEEECCC-C-CcCCCCc-eEEEEeCCC
Confidence 4889999999999943322111 1 123445999999999999988 4 3446888 99999987
Q ss_pred -CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCC
Q 037878 864 -SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRP 941 (2280)
Q Consensus 864 -~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~ 941 (2280)
++++|||||||.+.++|.. +||.|||.+++| ||+++|+||.||+||+.|+||.+.|||++|.+||+|.+
T Consensus 376 p~~~~~~w~d~er~~~~y~~--------~~y~tGD~~~~DedGy~~i~GR~DDvI~vsG~Rig~~EvE~~l~~hP~VaE- 446 (528)
T COG0365 376 PGMALTYWNDPERYKEAYFG--------RWYRTGDWAERDEDGYFWLHGRSDDVIKVSGKRIGPLEIESVLLAHPAVAE- 446 (528)
T ss_pred chhhhhhhCCHHHHHHHHhh--------ceeecCceeEEccCCCEEEEeeccceEeccCeeccHHHHHHHHHhCcceee-
Confidence 9999999999999999864 399999999997 99999999999999999999999999999999999987
Q ss_pred ceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCccc
Q 037878 942 GCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKI 1021 (2280)
Q Consensus 942 ~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKv 1021 (2280)
|+|+++||+.-++ . .++++.++++...+ ++.+.|++++.+.......|-.+..+++||+|.||||
T Consensus 447 --aAvVg~pd~~kg~----------~--v~afVvL~~g~~~~-~L~~ei~~~vr~~~~~~~~p~~i~fv~~LPkT~sGKI 511 (528)
T COG0365 447 --AAVVGVPDPGKGQ----------I--VLAFVVLAAGVEPN-ELAEEIRRHVARNIGPHAIPRKIRFVDELPKTASGKI 511 (528)
T ss_pred --eEEEeccCCCCCc----------E--EEEEEEecCCCChH-HHHHHHHHHHHhccCcccCCceEEEecCCCCCCcccH
Confidence 9999999975432 1 22333345565555 7788888877665444455666777799999999999
Q ss_pred chHHHHHHhhc
Q 037878 1022 KRFECLKQFVD 1032 (2280)
Q Consensus 1022 dR~~L~~~~~~ 1032 (2280)
.|+.|++.+.+
T Consensus 512 ~R~~lr~~~~~ 522 (528)
T COG0365 512 QRRLLRKILHK 522 (528)
T ss_pred HHHHHHHHHhh
Confidence 99999988653
No 14
>KOG1177 consensus Long chain fatty acid acyl-CoA ligase [Lipid transport and metabolism]
Probab=100.00 E-value=2e-62 Score=569.05 Aligned_cols=504 Identities=25% Similarity=0.336 Sum_probs=410.1
Q ss_pred CCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 467 ELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 467 ~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
+..|+.+.++..+++. ||+.|.++..++ .++||+|+.+.++++|++|... |+++||||+++.||+.+|+..
T Consensus 48 ~~~Tigq~l~~~t~~v--~dkea~Vf~~eg----~R~Tf~~~~~ev~slAaGll~l---GL~kGDrVgvwgpN~~~w~l~ 118 (596)
T KOG1177|consen 48 DSETIGQLLETTTERV--PDKEAAVFDHEG----IRLTFSEFVSEVESLAAGLLSL---GLKKGDRVGVWGPNSYEWVLC 118 (596)
T ss_pred ccccHHHHHHHHhhcc--CcceEEEEeecc----chhhHHHHHHHHHHHHhhHHhh---cCCCCCEEEEecCChHHHHHH
Confidence 4568999999988875 899998887654 4699999999999999999999 999999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh------------hccC--------CCCCC
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA------------VRVG--------SWPNL 606 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~------------~~~~--------~~~~~ 606 (2280)
+|||.++|.+.|+++|.++.+. ++..+++.++++++....+... +... .++.+
T Consensus 119 ~lA~A~AG~v~v~~NP~Yq~~e-------lr~~L~k~~~k~l~~p~~~k~~ny~~~l~~icPEv~~~~~G~lkS~~lp~l 191 (596)
T KOG1177|consen 119 QLACARAGLVLVNLNPAYQSEE-------LRYVLKKVGCKALFAPPQFKTQNYYETLLEICPEVMRGDPGQLKSELLPEL 191 (596)
T ss_pred HHHHHHhceEEeccCcccccHH-------HHHHHhhcCeEEEEccchhhhchHHHHHHHhhHHhhcCCCccccccccccc
Confidence 9999999999999999999777 8899999999999987644321 1111 11222
Q ss_pred Ccccccc-------------cccc-ccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC
Q 037878 607 PWLHTDS-------------WVKN-SKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK 672 (2280)
Q Consensus 607 ~~~~~~~-------------~~~~-~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~ 672 (2280)
..+...+ .... ..+....-........|||++.|.|||||||.|||+.+||-|++++......+++
T Consensus 192 thvi~~~ed~~~~Ga~~~sev~~~~s~~~~a~l~~~~k~~~pdd~~niQFTSGTTG~PKgatLsH~~~~Nna~~vg~r~g 271 (596)
T KOG1177|consen 192 THVILADEDHPLPGAFLLSEVLKAASKEERAKLADMSKWLSPDDAVNIQFTSGTTGAPKGATLSHYNFLNNARAVGARAG 271 (596)
T ss_pred eEEEecCCCCcCCCceehHHHHHhcchHHHHHHHhhhhhcCCCCceEEEeccCCCCCCcceeeehhhhhhhHHHHHHHhC
Confidence 2111111 0000 0000000001112357899999999999999999999999999999999999999
Q ss_pred CCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccccc
Q 037878 673 STSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDK 752 (2280)
Q Consensus 673 ~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~ 752 (2280)
+.++++++...|++|.+|.+..++.+|..|+++|+++|. .+|...++.|+++++|.+.++|+++..+++......
T Consensus 272 ~~e~~~i~~~~Pl~H~~G~~~~~ma~l~~gat~Vfp~~~---f~~k~alqai~~ekcT~l~gtPtM~~Dlln~~~~~~-- 346 (596)
T KOG1177|consen 272 YNEKHRICIPNPLYHCFGCVLGVMAALMHGATIVFPAPS---FDPKDALQAISNEKCTTLYGTPTMFVDLLNIPQKQQ-- 346 (596)
T ss_pred cCcceEEEecCchHHHHHHHHHHHHHHHhCcEEEeeCCC---CChHHHHHHHHhhceEEEecChHHHHHHhcchhhcc--
Confidence 999999999999999999999999999999999998773 399999999999999999999999999986654443
Q ss_pred ccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCC
Q 037878 753 VRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQN 832 (2280)
Q Consensus 753 ~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p 832 (2280)
.+++++|-.+.||+++|+++++....... + ..+..+||+|||+.+.+.....+.+ .....++|+-
T Consensus 347 ---~~~s~lr~~vigGa~~s~eLlk~iv~~~~---m--~~i~v~YG~TEts~v~~~~~~~D~~-------~~~~ksVG~~ 411 (596)
T KOG1177|consen 347 ---VDLSSLRKGVIGGAPVSPELLKLIVNQMN---M--KDIAVAYGLTETSPVLFMSLLGDPP-------EERIKSVGHL 411 (596)
T ss_pred ---CchhhhhhheeCCCCCCHHHHHHHHHhhC---c--eeeEEEeeccccCcceeeecCCCCH-------HHHHhhhhhc
Confidence 78999999999999999999999987643 2 2378899999999887766543332 2345688999
Q ss_pred CCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEec
Q 037878 833 DPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGR 911 (2280)
Q Consensus 833 ~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR 911 (2280)
+++.+..|+|.++ ..+|.|..||||+||++++.|||+++++|.++..+ ++||+|||+++++ +|.++++||
T Consensus 412 m~h~Ea~iv~~~g--~~v~~~~~Gel~iRGY~tMl~Ywg~~~kT~eti~~-------drW~~TGDi~~m~enG~i~iVGR 482 (596)
T KOG1177|consen 412 MDHYEAAIVDKDG--SEVPLGTKGELLIRGYSTMLGYWGEEEKTKETIGN-------DRWYDTGDIAVMDENGTIEIVGR 482 (596)
T ss_pred ccccccccccCCC--CccccCCCceEEEEechhheeecCCcccchhhccc-------ccceecCceEEEcCCCcEEEEEc
Confidence 9999999999765 45678999999999999999999999999988754 6999999999997 999999999
Q ss_pred CCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHH
Q 037878 912 IKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIK 991 (2280)
Q Consensus 912 ~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~ 991 (2280)
.||+|+.+|++|+|.|||+.|.+||.|.+ +.|+|++|+.+++. .++++-.-+..++....+++.+.++
T Consensus 483 skdmI~rGGENVyP~ElE~fL~~hp~V~~---a~VVGV~D~R~GE~---------VCA~vRLqe~~e~~~t~E~lKa~Ck 550 (596)
T KOG1177|consen 483 SKDMIIRGGENVYPTELEDFLNKHPLVKE---AHVVGVPDERLGEE---------VCACVRLQEGAEGKTTAETLKAMCK 550 (596)
T ss_pred ccCeEEeCCcccChHHHHHHHhhCCCeee---EEEEccCCCcccce---------EEEEEEeeccccccccHHHHHHHHh
Confidence 99999999999999999999999999986 89999999887642 2233333222233334477888888
Q ss_pred HHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 992 TRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 992 ~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.+++ ++++|... +..+++|+|.+|||+|.+++++.+
T Consensus 551 ~kla-HFKiPky~---vf~~~FPlT~tGKIqKFeir~~~k 586 (596)
T KOG1177|consen 551 GKLA-HFKIPKYF---VFVDEFPLTTTGKIQKFEIREMSK 586 (596)
T ss_pred cccc-cccCCcEE---EEeccCcccccccchhHHHHHHHH
Confidence 8854 57776543 444889999999999999999976
No 15
>cd08156 catalase_clade_3 Clade 3 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 3 catalases are the most abundant subfamily and are found in all three kingdoms of life; they have a relatively small subunit size of 43 to 75 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. Clade 3 catalases also bind NADPH as a second redox-active cofactor. They form tetramers, and in eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=7.8e-63 Score=599.09 Aligned_cols=296 Identities=23% Similarity=0.371 Sum_probs=271.1
Q ss_pred eecccccccccccceeEEEEecCCCCCCcCcccCC-CceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCcc
Q 037878 1711 KVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHP-GKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSSL 1787 (2280)
Q Consensus 1711 ~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~-g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~~ 1787 (2280)
+++||++||||+|++|+|++++|+++++++++|+. |+++||++|||+++|+++ |+.+|+|||||||+++ +|+
T Consensus 1 rIPER~vHAKG~ga~G~F~~t~d~s~~t~A~~f~~~gk~tPv~vRFStv~G~~gs~Dt~rd~RGfAvKF~t~-eG~---- 75 (429)
T cd08156 1 RIPERVVHAKGAGAFGTFEVTHDITKYTKAKIFSEVGKKTPVFVRFSTVAGERGSADTERDPRGFALKFYTE-EGN---- 75 (429)
T ss_pred CCCcccccCccceEEEEEEECCCchHHHhhhhccCCCceeeEEEecccCCCCCCCCccCCCcCeEEEEEEcC-CCc----
Confidence 57999999999999999999999999999999954 999999999999999865 9999999999999997 454
Q ss_pred eeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEEE
Q 037878 1788 LDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRLF 1854 (2280)
Q Consensus 1788 ~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~~ 1854 (2280)
|||||||+||||++|+++|++|+++.+++|.+.++ .+| |....+.+.+++|.||++|+|||+|+|+|
T Consensus 76 ~DlV~nn~PvFfirdp~~Fp~~i~a~k~~P~t~~~d~~~~~df~~~~Pes~h~~~~l~s~rg~P~sy~~~~~~gvhtf~~ 155 (429)
T cd08156 76 WDLVGNNTPVFFIRDPIKFPDFIHTQKRNPQTNLKDPDMFWDFWSLSPESLHQVTILFSDRGIPDGYRHMNGYGSHTFSL 155 (429)
T ss_pred eeeeeecCcccccCCHHHhhHhhhccCCCCCCCCCCHHHHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCccccceEEE
Confidence 99999999999999999999999999998865544 344 44455666678999999999999999999
Q ss_pred EEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCC
Q 037878 1855 RFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIP 1934 (2280)
Q Consensus 1855 ~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~ 1934 (2280)
+|++|+.+||||||+|.+|+++++.+|+.+.... ++|||++||+++|++|++++|+|+||+++++
T Consensus 156 vn~~G~~~~Vk~h~~p~~G~~~l~~eea~~~~g~---------------~~d~l~~dL~~~I~~G~~P~w~l~vQv~~~~ 220 (429)
T cd08156 156 VNAKGERFWVKFHFKTDQGIKNLTNEEAAELAGE---------------DPDYAQRDLFEAIERGDFPSWTLYVQVMPEE 220 (429)
T ss_pred EcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhhCC---------------CCCHHHHHHHHHHhcCCCceEEEEEEEechh
Confidence 9999999999999999999999999998876432 4569999999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHHh
Q 037878 1935 QDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEI 2012 (2280)
Q Consensus 1935 d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~ 2012 (2280)
|...++|+++|+||.||++++|++++|+|+||+++++ ++|||++|+|.++++||+||+ |||||+|.++|.+
T Consensus 221 d~~~~~f~~~D~Tk~Wp~~~~p~i~vG~l~Ln~n~~n~f~e~eq~aF~P~~lvpGI~~S~-------Dp~Lq~R~faY~d 293 (429)
T cd08156 221 DAEKYRFNPFDLTKVWPHKDYPLIEVGKLELNRNPENYFAEVEQAAFSPSNLVPGIGFSP-------DKMLQGRLFSYAD 293 (429)
T ss_pred HhhcCCCCCCcCCccCCccCcceEEeEEEEEecCCcchhhhhheecccCcCCCCCccCCC-------CccccccccccHh
Confidence 9999999999999999999999999999999999998 899999999999999999999 9999999999999
Q ss_pred hhHhhcCCCCchhHHHhhhcccccccCCCCC
Q 037878 2013 CQHLRNGEPLPESWRIFLEQSDVKVDLSGCP 2043 (2280)
Q Consensus 2013 s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 2043 (2280)
|+++|+|.+ ++|++|| .|.|+
T Consensus 294 t~~~Rlg~N--------~~qlPvN--~p~~~ 314 (429)
T cd08156 294 AHRYRLGVN--------YHQLPVN--RPKCP 314 (429)
T ss_pred hhhcCCCCC--------HhhCCCC--CCCCC
Confidence 999999998 5776666 44444
No 16
>KOG1176 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=4e-60 Score=602.59 Aligned_cols=485 Identities=25% Similarity=0.379 Sum_probs=387.4
Q ss_pred ceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCcc
Q 037878 487 KTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPL 566 (2280)
Q Consensus 487 ~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~ 566 (2280)
.+.+++...+| +.+||+|+.+++.++|..|.+++ .|+++||+|++++||+++++++++||+.+|+++.|++|.+..
T Consensus 33 ~~~~i~~~~~g---~~~T~~e~~~~~~r~A~~L~~~~-~~i~~gDvV~i~~pNs~~~~~~~la~~~~Ga~~~~~Np~~~~ 108 (537)
T KOG1176|consen 33 NTSLVYQDSDG---RELTYSELHDRCRRLASALSELG-LGIKKGDVVGILAPNTPEFVELALAVPMAGAVLNPLNPRLTA 108 (537)
T ss_pred cceEEEecCCC---cEEcHHHHHHHHHHHHHHHHhcC-CCCCCCCEEEEEcCCCHHHHHHHHHHHHcCccccccCcccCH
Confidence 36666655443 58999999999999999999771 248999999999999999999999999999999999999887
Q ss_pred ccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCccccc---------cccccc---cccccccccc-cCCC
Q 037878 567 QRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHTD---------SWVKNS---KNLLAENVVC-FTES 632 (2280)
Q Consensus 567 ~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~~---------~~~~~~---~~~~~~~~~~-~~~~ 632 (2280)
.. +...++++++++++++.+....+.... ......+... +..... ....+..... ..+.
T Consensus 109 ~e-------i~~~~~~s~~kiif~d~~~~~~i~~~~~~~~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (537)
T KOG1176|consen 109 SE-------IAKQLKDSKPKLIFVDEDFYDKISEATSKLALKIIVLTGDEGVISISDLVEDLDAFEDLMPEGLPDGIRPV 181 (537)
T ss_pred HH-------HHHHHHhcCCeEEEEcCchHHHHHHHHhhcCCceEEEecccCccccccccccccchhhccccCCCcccccC
Confidence 77 889999999999999887665442211 0001111111 000000 0000000000 3445
Q ss_pred CCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccc
Q 037878 633 QPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLT 712 (2280)
Q Consensus 633 ~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~ 712 (2280)
..+|++.|+|||||||.||||++||+|++............+..++.++.+|++|.+|+...+.+.+..|+++++...
T Consensus 182 ~~dd~~~il~SSGTTg~PKgV~lsHr~~~~~~~~~~~~~~~~~~~v~l~~lPl~H~~Gl~~~~~~~~~~~~~ii~~~~-- 259 (537)
T KOG1176|consen 182 SEDDTAAILYSSGTTGLPKGVVLSHRNLIANTLSIKIGWELTSDDVYLCTLPLFHIYGLITLLLSLLAGGTTIICLRK-- 259 (537)
T ss_pred CCCCeEEEecCCCCCCCCceEEEecHHHHHHHHHhhhcccCCCCceEEEechHHHHhHHHHHHHHHHhCCceEEECCC--
Confidence 669999999999999999999999999999887777777788899999999999999997766667777777766542
Q ss_pred cccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcc
Q 037878 713 FIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGV 792 (2280)
Q Consensus 713 ~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~ 792 (2280)
| ++..+++.+++|++|++..+|.++..+++... ....+++++|.+.+||+++++++++++.+.+ +...
T Consensus 260 f--~~~~~~~~i~kykvt~~~~vP~~~~~l~~~p~-----~~~~~l~sl~~v~~gga~~~~~~~~~~~~~l-----~~~~ 327 (537)
T KOG1176|consen 260 F--DAELFLDLIEKYKVTHLFLVPPVLNMLAKSPI-----VKKYDLSSLRSVLSGGAPLSPATLEKVKERL-----PNVT 327 (537)
T ss_pred C--CHHHHHHHHHHhCEEEEEcChHHHHHHhcCCc-----cCcccCCccEEEEecCCCCCHHHHHHHHHhC-----CCce
Confidence 2 89999999999999999999999999886542 2347899999999999999999999999986 4578
Q ss_pred cccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCC
Q 037878 793 MAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGR 872 (2280)
Q Consensus 793 v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~ 872 (2280)
+.++||+||+++.++....... ...+++|+++++.++.|.++.+ ...++++.||||++|++++.|||||
T Consensus 328 v~q~YGmTE~~~~~~~~~~~~e---------~k~~svG~~~~g~~~~v~~e~g--~~l~~~~~GEI~vrg~~imkGY~~N 396 (537)
T KOG1176|consen 328 VIQGYGMTEAGGLITSNDWGPE---------RKPGSVGRLLPGVRVKVLDETG--VSLGPNQTGEICVRGPQVMKGYLKN 396 (537)
T ss_pred EEEeeccccccCceeecCCCcc---------CcccccCccccceEEEeeCCCC--CCCCCCCceEEEEECcccchhhcCC
Confidence 9999999999976665433221 2358899999988888888664 3447899999999999999999999
Q ss_pred chhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccc
Q 037878 873 EELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPE 951 (2280)
Q Consensus 873 p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~ 951 (2280)
|+.|+++|.+ +|||||||+|++| ||+|+|+||+||+||.+|++|+|.|||++|.+||+|.+ |||+++||
T Consensus 397 peaT~~~~~~-------~GW~~TGDiGy~D~DG~l~IvdR~KdlIk~~G~qv~P~EiE~vL~~hP~V~e---aaVvgipD 466 (537)
T KOG1176|consen 397 PEATKEAFDD-------DGWFHTGDLGYFDEDGYLYIVDRSKDLIKYGGEQVSPAEIEAVLLTHPDVLE---AAVVGIPD 466 (537)
T ss_pred hHHHHhhccc-------CCccccCceEEEcCCCeEEEecchhhheeeCCEEeCHHHHHHHHHhCCCccE---EEEEcccc
Confidence 9999999974 3999999999997 99999999999999999999999999999999999986 99999999
Q ss_pred cccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHh
Q 037878 952 EVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQF 1030 (2280)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~ 1030 (2280)
+..|+. ..++|+. +++. ...+++++.++++++. ++.+. .++.+++||+|+||||.|+.|++.+
T Consensus 467 e~~Ge~---------p~A~VV~---k~g~~lte~di~~~v~k~l~~-y~~~~---~V~Fvd~lPKs~~GKi~R~~lr~~~ 530 (537)
T KOG1176|consen 467 EVWGET---------PAAFVVL---KKGSTLTEKDIIEYVRKKLPA-YKLPG---GVVFVDELPKTPNGKILRRKLRDIA 530 (537)
T ss_pred cccCCc---------ceEEEEe---cCCCcCCHHHHHHHHHhhCCh-hhccC---eEEEeccCCCCCcchHHHHHHHHHH
Confidence 987642 2333332 2233 3347888899998887 55443 3344599999999999999999997
Q ss_pred hcC
Q 037878 1031 VDG 1033 (2280)
Q Consensus 1031 ~~~ 1033 (2280)
.+.
T Consensus 531 ~~~ 533 (537)
T KOG1176|consen 531 KKL 533 (537)
T ss_pred Hhc
Confidence 653
No 17
>COG0318 CaiC Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.8e-59 Score=624.14 Aligned_cols=502 Identities=30% Similarity=0.489 Sum_probs=399.2
Q ss_pred CCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 467 ELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 467 ~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
...++.+++++++.+. |+++|+.+.+.++ ++||+||+++++++|+.|++. |+++||+|+|+++|+++++++
T Consensus 9 ~~~~~~~~l~~~a~~~--~~~~a~~~~~~~~----~~Ty~el~~~~~~~A~~L~~~---~v~~gdrVail~~N~~e~~~~ 79 (534)
T COG0318 9 AELTLASLLERAARRN--PDRPALIFLGRGG----RLTYRELDRRANRLAAALQAL---GVKPGDRVAILLPNSPEFLIA 79 (534)
T ss_pred ccccHHHHHHHHHHhC--CCceEEEEcCCCc----eeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHH
Confidence 3567899999998874 8999998876432 599999999999999999998 899999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC--CCCCCcccccccccc-----cc
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS--WPNLPWLHTDSWVKN-----SK 619 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~-----~~ 619 (2280)
++||+++|++++|+++.+..++ +.+++++++++.++++........... .+....+........ ..
T Consensus 80 ~~a~~~~Gav~vpln~~~~~~~-------l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (534)
T COG0318 80 FLAALRAGAVAVPLNPRLTPRE-------LAYILNDAGAKVLITSAEFAALLEAVAEALPVVLVVLLVGDADDRLPITLE 152 (534)
T ss_pred HHHHHhcCEEEeecCcccCHHH-------HHHHHHhcCCeEEEEcccchhHHHHHhccCCcceEEEecccccccccccHH
Confidence 9999999999999999986665 889999999999999876322221110 011110000000000 00
Q ss_pred ccccc---cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC--CCCCcEEEEEcCchhhhhHHHH
Q 037878 620 NLLAE---NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK--STSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 620 ~~~~~---~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
..... ........+++|+|+|+|||||||.||||++||+|+..+.......+. ++++|++++++|++|++|+...
T Consensus 153 ~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~~~d~~l~~lPl~H~~Gl~~~ 232 (534)
T COG0318 153 ALAAEGPGPDADARPVDPDDLAFLLYTSGTTGLPKGVVLTHRNLLANAAGIAAALGGGLTPDDVVLSWLPLFHIFGLIVG 232 (534)
T ss_pred HHhhccCCcccccCCCCCCCEEEEEeCCCCCCCCCEeEEecHhHHHHHHHHHHHhcccCCCCceEEEecChHHHHHHHHH
Confidence 00000 011111256899999999999999999999999999999988888888 8999999999999999999888
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCC-ccEEEEecCCCCH
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSS-MKFLMVAAEPVRQ 773 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~-Lr~l~~gGe~l~~ 773 (2280)
++.+++.|+++++.++..| ++..++..+.++++|++..+|.++..+++...... .++++ +|++++||+++++
T Consensus 233 ~~~~~~~G~~~v~~~~~~f--~~~~~~~~i~~~~~t~~~~vPt~~~~ll~~~~~~~-----~~~~~~lr~~~~gg~~~~~ 305 (534)
T COG0318 233 LLAPLLGGGTLVLLSPEPF--DPEEVLWLIEKYKVTVLSGVPTFLRELLDNPEKDD-----DDLSSSLRLVLSGGAPLPP 305 (534)
T ss_pred HHHHHHcCCEEEeCCCCCc--CHHHHHHHHHHhcceEEecchHHHHHHHhCCccCc-----cccccceEEEEecCCcCCH
Confidence 8888999999999876555 89999999999999999999999988876544432 33444 9999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCC
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPG 853 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G 853 (2280)
++.++|.+.+. ...++++||+||++..++...... . ....+++|+|+|+++++|+|++++ .+.| |
T Consensus 306 ~~~~~~~~~~~-----~~~i~~~YG~TE~~~~~~~~~~~~-~-------~~~~~~~G~~~pg~~v~Ivd~~~~-~~~p-g 370 (534)
T COG0318 306 ELLERFEERFG-----PIAILEGYGLTETSPVVTINPPDD-L-------LAKPGSVGRPLPGVEVRIVDPDGG-EVLP-G 370 (534)
T ss_pred HHHHHHHHHhC-----CCceEEeecccccCceeecCCCch-h-------hhcCCcccccCCCcEEEEEeCCCC-ccCC-C
Confidence 99999999863 347999999999997766554332 1 112356699999999999998876 4444 9
Q ss_pred CeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHH
Q 037878 854 KEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTV 932 (2280)
Q Consensus 854 ~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L 932 (2280)
++|||+|+||+++.||||+|+.|++.|.+ ++||+|||+|+++ ||.++|+||.||+||.+|++|+|.|||.++
T Consensus 371 ~vGei~irgp~v~~GY~~~pe~t~~~f~~-------~gW~~TGDlg~~d~~G~l~i~gR~kd~I~~gG~ni~p~eiE~~l 443 (534)
T COG0318 371 EVGEIWVRGPNVMKGYWNRPEATAEAFDE-------DGWLRTGDLGYVDEDGYLYIVGRLKDLIISGGENIYPEEIEAVL 443 (534)
T ss_pred CceEEEEECchhhhhhcCChHHHHHhhcc-------CCeeeecceEEEcCCccEEEEeccceEEEeCCeEECHHHHHHHH
Confidence 99999999999999999999999998863 4899999999997 899999999999999999999999999999
Q ss_pred HhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC---CCCHHHHHHHHHHHHHhcCcceeEEEEec
Q 037878 933 ESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK---PVDKDVIENIKTRVVEEHGVTVASVKLIK 1009 (2280)
Q Consensus 933 ~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~---~~~~~l~~~l~~~l~~~~~~~~~~~~lv~ 1009 (2280)
.+||+|.+ |+|++++++.+++. +.+++ +..++. ...+++.++++++++. +++| ..++.
T Consensus 444 ~~~~~V~~---aavvgvpd~~~Ge~----------~~a~v--~~~~~~~~~~~~~~i~~~~~~~l~~-~~~P---~~v~~ 504 (534)
T COG0318 444 AEHPAVAE---AAVVGVPDERWGER----------VVAVV--VLKPGGDAELTAEELRAFLRKRLAL-YKVP---RIVVF 504 (534)
T ss_pred HhCCCcce---EEEEeCCCCccCce----------EEEEE--EEcCCCCCCCCHHHHHHHHHhhhhc-ccCC---eEEEE
Confidence 99998865 99999999876542 22222 223321 1346777777776654 4444 44455
Q ss_pred CCCccCCCCcccchHHHHHHhhc
Q 037878 1010 PRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1010 ~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+++||+|++||++|++|++.+.+
T Consensus 505 v~~lP~t~sGKi~r~~lr~~~~~ 527 (534)
T COG0318 505 VDELPRTASGKIDRRALREEYRA 527 (534)
T ss_pred eCCCCCCCchhhhHHHHHHHHHh
Confidence 59999999999999999998765
No 18
>cd08155 catalase_clade_2 Clade 2 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 2 catalases are mostly found in bacteria and fungi; they have a large subunit size of 75 to 84 kDa, and bind a heme d group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=6.5e-62 Score=590.27 Aligned_cols=298 Identities=20% Similarity=0.274 Sum_probs=271.2
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+|++||.+||||+|++|+|++++++++++++++|+ +|++|||++|||+++|++. |+.+|+|||||||+++ +|
T Consensus 3 ErIPER~vHAKG~ga~G~F~~t~d~~~~t~a~~f~~~g~~~pv~~RFS~~~g~~~s~D~~rd~RG~AiKf~~~-~g---- 77 (443)
T cd08155 3 ERIPERVVHARGSGAHGYFQVYESLSQYTKAKFLQDPGKKTPVFVRFSTVAGSRGSADTVRDVRGFAVKFYTE-EG---- 77 (443)
T ss_pred ccCccccccccccceEEEEEECCchhHHHhhhhccCCCceeeEEEEcccCCCCCCCCccCCCCCeEEEEEEcC-CC----
Confidence 68999999999999999999999999999999995 5799999999999999865 9999999999999987 34
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhccC--------------c---chhhhhhhcccCCCccccceeeee
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKRV--------------P---HIRDAVWKSLRLSDSYAEMHYYSN 1849 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~~--------------~---~~~~~~~~~~~~p~s~~~~~y~s~ 1849 (2280)
+|||+|||+||||++|+++|++|+++++++|++.+++. | +....+.+.+++|.||++|+|||+
T Consensus 78 ~~D~v~nn~PvFf~rd~~~Fp~~i~a~k~~P~t~~~dp~~~~~~~~dF~~~~Pes~h~~~~l~s~rg~P~sy~~~~~~gv 157 (443)
T cd08155 78 NYDLVGNNIPVFFIQDAIKFPDLIHAVKPEPHNEMPQAQSAHDTFWDFVSLQPESAHMVMWAMSDRAIPRSYRMMEGFGV 157 (443)
T ss_pred ceeeeeecCCceecCCHHHhhHHHhhccCCCCCCCCCcchhhhhHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccc
Confidence 49999999999999999999999999998886665543 3 334445555689999999999999
Q ss_pred eeEEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEE
Q 037878 1850 ICRLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQ 1929 (2280)
Q Consensus 1850 ~~~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ 1929 (2280)
|+|+|+|++|+.+||||+|+|.+|+++++.+|+.+.... ++|||.+||+++|++|++++|+|+||
T Consensus 158 htf~~vna~G~~~~Vk~~~~p~qG~~~l~~eeA~~~~~~---------------~~d~l~~dL~~~I~~G~~p~w~l~vQ 222 (443)
T cd08155 158 HTFRLVNAQGKSTFVKFHWKPVLGVHSLVWDEAQKIAGK---------------DPDFHRRDLWEAIESGDYPEWELGVQ 222 (443)
T ss_pred cceEEEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhhCC---------------CCchHHHHHHHHHhcCCCceEEEEEE
Confidence 999999999999999999999999999999998776433 45699999999999999999999999
Q ss_pred EeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchh
Q 037878 1930 IRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRS 2007 (2280)
Q Consensus 1930 ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~ 2007 (2280)
+++++|...++|+++|+||+||++++|.+++|+|+||+++++ ++|||++|+|.++++||+||+ |||||+|.
T Consensus 223 v~~~~d~~~~~f~~~D~Tk~WP~~~~p~i~~G~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~S~-------DpmLq~R~ 295 (443)
T cd08155 223 LIDEEDEFKFDFDILDPTKLIPEELVPVQRVGKMVLNRNPDNFFAETEQVAFCPANVVPGIDFSN-------DPLLQGRL 295 (443)
T ss_pred EcCHHHHhcCCCCCCcCCCcCCccccceEEeEEEEEecCCcchhhhhhhhcccCcCCCCCccCCC-------Cccccccc
Confidence 999999999999999999999999999999999999999998 899999999999999999999 99999999
Q ss_pred hHHHhhhHhhc-CCCCchhHHHhhhcccccccCCCCCc
Q 037878 2008 LIYEICQHLRN-GEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2008 ~~Y~~s~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
++|.+|+++|+ |.+ ++|.+|| .|.|++
T Consensus 296 faY~ds~r~RlgG~N--------~~qlPvN--~P~~~v 323 (443)
T cd08155 296 FSYLDTQLSRLGGPN--------FHELPIN--RPVCPV 323 (443)
T ss_pred ccchHhhhccCCCCC--------hhhCccc--cccCCc
Confidence 99999999999 688 5676666 444544
No 19
>cd08154 catalase_clade_1 Clade 1 of the heme-binding enzyme catalase. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Clade 1 catalases are found in bacteria, algae, and plants; they have a relatively small subunit size of 55 to 69 kDa, and bind a protoheme IX (heme b) group buried deep inside the structure. They appear to form tetramers. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=1e-61 Score=590.86 Aligned_cols=298 Identities=20% Similarity=0.318 Sum_probs=270.8
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|++||||+|++|+|++++++++++++++|+ +|+++||++|||+++|++. |+.+|+|||||||+++ +|+
T Consensus 42 eripeR~vHAKG~ga~G~F~vt~d~~~~t~a~~f~~~g~~~Pv~vRFS~~~g~~~~~D~~rd~RGfAvKf~~~-eg~--- 117 (469)
T cd08154 42 ERIPERVVHARGAGAHGYFEAYGDISDYTRASFLQEPGKKTPVFVRFSTVIHGKGSPETLRDPRGFAVKFYTE-EGN--- 117 (469)
T ss_pred CCCccccccCceeeEEEEEEECCchhHHHhhhhccCCCccceeEEecccCCCCCCCCccCCCCCeeEEEEEcC-CCc---
Confidence 56899999999999999999999999999999995 5889999999999988855 9999999999999987 444
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhh----------ccCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHV----------KRVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
|||+|||+|+||++|+++|++|+++++++|++.+ ..+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 118 -~Dlv~nn~PvFfird~~~Fp~~i~a~k~~P~t~~~dp~~~~dF~~~~PEs~h~~~~l~s~rg~P~sy~~~~g~gvhtf~ 196 (469)
T cd08154 118 -WDLVGNNLPVFFIRDAIKFPDMIHALKPSPVTNIQDPNRIFDFFSHVPESTHMLTFLYSDWGTPASYRHMDGSGVHTYK 196 (469)
T ss_pred -eeeeeecCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHcChHHHHHHHHHhcCCCCCCCcccCCccccceeE
Confidence 9999999999999999999999999998875544 3444 4455556666899999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+|+.+.... ++|||++||++||++|++++|+|+||++++
T Consensus 197 ~vn~~G~~~~VK~h~~p~~G~~~l~~eeA~~~~g~---------------~~d~l~~dL~~~I~~G~~p~w~l~vQv~~~ 261 (469)
T cd08154 197 WVNAEGKVVYVKYHWKPKQGVKNLTAEEAAEVQGK---------------NFNHATQDLYDAIAAGNYPEWELYVQIMDP 261 (469)
T ss_pred EEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhhcC---------------CCcHHHHHHHHHHhcCCCceEEEEEEEcCH
Confidence 99999999999999999999999999998876432 467999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|...++|+++|+||.||++++|++++|+|+||+++++ ++|||++|+|.++++||++|+ |||||+|.++|.
T Consensus 262 ~D~~~~~f~~~D~Tk~WP~~~~p~i~vG~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~S~-------DpmLq~R~faY~ 334 (469)
T cd08154 262 KDLDKLDFDPLDDTKIWPEDQFPLKPVGKMTLNKNPDNFFAEVEQVAFSPGNLVPGIEPSD-------DKMLQGRLFSYS 334 (469)
T ss_pred HHhhcCCCCCCcCCcccCCcccceEEeEEEEEecCCcchhhhhhhhhccccCCCCCcCCCC-------Ccccccccccch
Confidence 99999999999999999999999999999999999998 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
+|+++|+|.+ ++|.+|| .|.|+.
T Consensus 335 ds~r~Rlg~N--------~~qlPvN--~p~~~~ 357 (469)
T cd08154 335 DTQRYRLGPN--------YLQLPIN--APKAAV 357 (469)
T ss_pred hHhhccCCCC--------hhhCCCC--CCCCCC
Confidence 9999999988 4666665 555543
No 20
>PLN02609 catalase
Probab=100.00 E-value=1.1e-61 Score=590.67 Aligned_cols=298 Identities=21% Similarity=0.310 Sum_probs=272.9
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|++||||+|++|+|++++++++++++++|+ +|+++||++|||+++|++. |+.+|+|||||||+++ +|+
T Consensus 57 ErIpeR~vHAKG~ga~G~F~~t~d~s~~t~a~~f~~~g~~~pv~vRFS~~~G~~~s~D~~rd~RG~AiKf~~~-~g~--- 132 (492)
T PLN02609 57 ERIPERVVHARGASAKGFFEVTHDISNLTCADFLRAPGVQTPVIVRFSTVIHERGSPETLRDPRGFAVKFYTR-EGN--- 132 (492)
T ss_pred ccccccccccccceEEEEEEECCchhHHHhhhhccCCCceeeEEEEcccCCCCCCCCCcCCCCCeeEEEEEcC-CCc---
Confidence 78999999999999999999999999999999994 5789999999999999865 9999999999999987 344
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhh----------hccCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEH----------VKRVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
|||+|||+|+||++|+++|++|+++.+++|.+. +..+| +....+++.+++|.||++|+|||+|+|+
T Consensus 133 -~D~v~nn~PvFf~rdp~~Fpd~i~a~k~~P~t~~~dp~~~~dF~~~~PEs~h~~~~l~s~rg~P~syr~~~~~gvhtF~ 211 (492)
T PLN02609 133 -FDMVGNNFPVFFIRDGMKFPDMVHALKPNPKTHIQEPWRILDFLSHHPESLHMFTFLFDDRGIPQDYRHMEGFGVHTYK 211 (492)
T ss_pred -eeEeeecCceeecCCHHHhhHHHhhcCCCCCCCCCChhHHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccccceE
Confidence 999999999999999999999999999887544 34455 4455666888999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+|+.+.... ++|||++||+++|++|+.++|+|+||++++
T Consensus 212 ~vn~~G~~~~Vk~h~~p~~G~~~l~~eeA~~~~g~---------------~~d~l~~DL~~~I~~G~~P~w~l~vQv~~~ 276 (492)
T PLN02609 212 LINKAGKAHYVKFHWKPTCGVKNLLDEEAVRVGGS---------------NHSHATQDLYDSIAAGNYPEWKLFIQTMDP 276 (492)
T ss_pred EECCCCCEEEEEEEEEeCCCCCCCCHHHHHHhhCC---------------CCcHHHHHHHHHHhcCCCceeEEEEEEcCH
Confidence 99999999999999999999999999998877543 356999999999999998999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|...++|+++|+||.||++++|.+++|+|+||+++++ ++|||++|+|.++++||+||+ |||||+|.++|.
T Consensus 277 ~d~~~~~f~~~D~Tk~WP~~~~p~i~vG~l~Ln~np~n~f~e~eq~aF~P~~lvpGI~~S~-------DpmLq~R~faY~ 349 (492)
T PLN02609 277 EDEDKFDFDPLDVTKTWPEDILPLQPVGRLVLNRNIDNFFAENEQLAFCPAIVVPGIYYSD-------DKLLQTRIFAYA 349 (492)
T ss_pred HHHhcCCCCCCcCCceeCcccceeeEeEEEEEecCCcchhhhhhhhccccccCCCCccCCC-------Ccccccccccch
Confidence 99999999999999999999999999999999999998 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
+|+++|+|.+ ++|++|| .|.|++
T Consensus 350 ds~~~Rlg~N--------~~qlPvN--~p~~~~ 372 (492)
T PLN02609 350 DTQRHRLGPN--------YLQLPVN--APKCAH 372 (492)
T ss_pred hHhhccCCCC--------hhhCccc--CCCCCc
Confidence 9999999998 5777766 444444
No 21
>PLN02654 acetate-CoA ligase
Probab=100.00 E-value=2.7e-58 Score=629.13 Aligned_cols=513 Identities=20% Similarity=0.217 Sum_probs=396.5
Q ss_pred HHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHH
Q 037878 472 DGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCM 551 (2280)
Q Consensus 472 ~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l 551 (2280)
.+++++++.+. .|+++|+++..+++...+++||+||.++++++|+.|++. |+++||+|+++++|++|+++++|||+
T Consensus 91 ~~~l~~~~~~~-~~~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~GdrV~i~~pn~~e~v~a~lA~~ 166 (666)
T PLN02654 91 YNCLDRNVEAG-NGDKIAIYWEGNEPGFDASLTYSELLDRVCQLANYLKDV---GVKKGDAVVIYLPMLMELPIAMLACA 166 (666)
T ss_pred HHHHHHhhccC-CCCCEEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 45666655421 489999988654333347899999999999999999998 99999999999999999999999999
Q ss_pred HcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC------------C---CCCCC-cccccccc
Q 037878 552 RAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG------------S---WPNLP-WLHTDSWV 615 (2280)
Q Consensus 552 ~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~------------~---~~~~~-~~~~~~~~ 615 (2280)
++|++++|+++..+.++ +..++++++++++|++.......+.. . ..... .+......
T Consensus 167 ~~Gav~vpv~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 239 (666)
T PLN02654 167 RIGAVHSVVFAGFSAES-------LAQRIVDCKPKVVITCNAVKRGPKTINLKDIVDAALDESAKNGVSVGICLTYENQL 239 (666)
T ss_pred HcCCEEEecCCCCCHHH-------HHHHHHhcCceEEEEcCccccCCcccchHHHHHHHHHhccccCCCccEEEEecccc
Confidence 99999999999999888 88999999999999976543211000 0 00000 00000000
Q ss_pred c----cc----------cccccc--cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHH-HHHHHHHHcCCCCCcE
Q 037878 616 K----NS----------KNLLAE--NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIH-NVKLMRKRYKSTSKTV 678 (2280)
Q Consensus 616 ~----~~----------~~~~~~--~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~-~~~~~~~~~~~~~~d~ 678 (2280)
. .. .+.... .........++|++||+|||||||+||||+++|++++. ........++++++|+
T Consensus 240 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgVv~sh~~~~~~~~~~~~~~~~~~~~d~ 319 (666)
T PLN02654 240 AMKREDTKWQEGRDVWWQDVVPNYPTKCEVEWVDAEDPLFLLYTSGSTGKPKGVLHTTGGYMVYTATTFKYAFDYKPTDV 319 (666)
T ss_pred cccccccccccCCcccHHHHhhcCCCCCCceecCCCCceEEEecCCCCCCCceEEecccHHHHHHHHHHHHhcCCCCCcE
Confidence 0 00 000000 00111224679999999999999999999999999764 4455666788999999
Q ss_pred EEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCC
Q 037878 679 LVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDL 758 (2280)
Q Consensus 679 ~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l 758 (2280)
+++.+|++|.++....++.+|+.|++++++++.....++..+++.++++++|++.++|++++.+.+.... .....++
T Consensus 320 ~~~~~~~~~~~g~~~~~~~~L~~G~tvvl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---~~~~~~l 396 (666)
T PLN02654 320 YWCTADCGWITGHSYVTYGPMLNGATVLVFEGAPNYPDSGRCWDIVDKYKVTIFYTAPTLVRSLMRDGDE---YVTRHSR 396 (666)
T ss_pred EEEcCCchhhhhhHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhhCcc---ccccCCh
Confidence 9999999999998778899999999999987655456899999999999999999999999988764321 1223578
Q ss_pred CCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceE
Q 037878 759 SSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDI 838 (2280)
Q Consensus 759 ~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v 838 (2280)
++||.++++||++++++.+++.+.++ ...+.+.+.||+||++...+....... ....+++|.|+||+++
T Consensus 397 ~~Lr~i~~~Ge~l~~~~~~~~~~~~g---~~~~~i~~~yg~TE~g~~~~~~~~~~~--------~~~~gs~G~p~~g~~v 465 (666)
T PLN02654 397 KSLRVLGSVGEPINPSAWRWFFNVVG---DSRCPISDTWWQTETGGFMITPLPGAW--------PQKPGSATFPFFGVQP 465 (666)
T ss_pred hheeEEEEecCCCCHHHHHHHHHHhC---CCCCceeccccccccCCeeeccCCCCC--------CCCCCccCCCCCCceE
Confidence 99999999999999999999888753 234679999999999865543221110 1234789999999999
Q ss_pred EEEcCCCCcccCCCCCeeEEEEcC--CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCe
Q 037878 839 RIVNPETSEEIGEPGKEGEVWISS--PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDL 915 (2280)
Q Consensus 839 ~Ivd~~~~~~~~p~G~~GEL~i~G--p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~ 915 (2280)
+|+|+++. . ++.|+.|||+|++ |++++||||||+.++++|... .+|||+|||+|+++ ||.++|+||+||+
T Consensus 466 ~i~d~~g~-~-~~~~~~Gel~v~~~~p~~~~gy~~~~~~~~~~~~~~-----~~g~~~TGD~~~~d~dG~l~i~GR~dd~ 538 (666)
T PLN02654 466 VIVDEKGK-E-IEGECSGYLCVKKSWPGAFRTLYGDHERYETTYFKP-----FAGYYFSGDGCSRDKDGYYWLTGRVDDV 538 (666)
T ss_pred EEECCCCC-C-CCCCCceEEEEcCCCchhhhhhcCChHHHHHhhhhc-----CCCEEEeCceEEECCCCcEEEeeeccCe
Confidence 99998763 3 4678899999999 789999999999998887531 24899999999997 9999999999999
Q ss_pred EEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHH
Q 037878 916 IIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVV 995 (2280)
Q Consensus 916 IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~ 995 (2280)
||++|+||+|.|||++|.+||+|.+ ++|++++++..+ +.+.+++ ...++...++++.+.+++.+.
T Consensus 539 I~~~G~ri~p~EIE~~l~~~p~V~e---aaVvg~~d~~~g----------e~~~a~V--vl~~~~~~~~~l~~~l~~~~~ 603 (666)
T PLN02654 539 INVSGHRIGTAEVESALVSHPQCAE---AAVVGIEHEVKG----------QGIYAFV--TLVEGVPYSEELRKSLILTVR 603 (666)
T ss_pred EEeCCEEECHHHHHHHHHhCCCeee---EEEEeeEcCCCC----------eEEEEEE--EECCCCCCCHHHHHHHHHHHH
Confidence 9999999999999999999999976 899998876432 1222222 234444444566677777777
Q ss_pred HhcCcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 996 EEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 996 ~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.++..++.|..++.+++||+|.|||++|++|++.+.
T Consensus 604 ~~L~~~~~P~~i~~v~~lP~T~sGKi~r~~l~~~~~ 639 (666)
T PLN02654 604 NQIGAFAAPDKIHWAPGLPKTRSGKIMRRILRKIAS 639 (666)
T ss_pred HhCCCCcCCCEEEECCCCCCCCCcCchHHHHHHHHc
Confidence 776666667677778999999999999999988764
No 22
>PRK07769 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4.8e-58 Score=627.53 Aligned_cols=549 Identities=30% Similarity=0.502 Sum_probs=402.7
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCC---CceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEE---GVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGL 541 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~---g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~ 541 (2280)
.++..++.++++++++. .|+++|+.+.+.+ ....+.+||+||.++++++|+.|.+. +++||+|+++++|++
T Consensus 17 ~~~~~~l~~~l~~~a~~--~~~~~a~~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~----~~~gd~V~i~~~n~~ 90 (631)
T PRK07769 17 FPPNTNLVRHVERWAKV--RGDKLAYRFLDFSTERDGVARDLTWSQFGARNRAVGARLQQV----TKPGDRVAILAPQNL 90 (631)
T ss_pred ccccCCHHHHHHHHHHh--CCCCeEEEEeccCCCCCCceeEeeHHHHHHHHHHHHHHHHHh----cCCCCEEEEEcCCCh
Confidence 34456899999888876 4889998875411 11236899999999999999999864 799999999999999
Q ss_pred hHHHHHHHHHHcCCeEEeC-CCCCc--cccchhhHHHHHHHHhhcCCeEEEEccccchhhcc--CCCCC---CCcccccc
Q 037878 542 DFVDAFFGCMRAKVLPVPV-LPPDP--LQRGGQALLKIENISKSCGAVAILSTIGYHSAVRV--GSWPN---LPWLHTDS 613 (2280)
Q Consensus 542 e~~va~LA~l~aGa~~vpl-d~~~p--~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~--~~~~~---~~~~~~~~ 613 (2280)
++++++|||+++|+++||+ ++..+ .++ +.++++++++++++++......+.. ...+. ...+..+.
T Consensus 91 e~~~~~lA~~~~G~v~vpl~~~~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (631)
T PRK07769 91 DYLIAFFGALYAGRIAVPLFDPAEPGHVGR-------LHAVLDDCTPSAILTTTDSAEGVRKFFRARPAKERPRVIAVDA 163 (631)
T ss_pred HHHHHHHHHHHcCCEEEeeCCCCccchHHH-------HHHHHHhCCCCEEEEChHHHHHHHHHHhhccccccceEEEccc
Confidence 9999999999999999999 45544 233 8899999999999998654332211 00010 01111111
Q ss_pred ccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH
Q 037878 614 WVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
... ... .........++|+++|+|||||||.||||++||+++...+......+++.+++++++++|++|++|+..
T Consensus 164 ~~~----~~~-~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~gl~~ 238 (631)
T PRK07769 164 VPD----EVG-ATWVPPEANEDTIAYLQYTSGSTRIPAGVQITHLNLPTNVLQVIDALEGQEGDRGVSWLPFFHDMGLIT 238 (631)
T ss_pred ccc----ccc-cccCCCCCCCCCeEEEEeCCCCCCCCcEEEEcHHHHHHHHHHHHHHcCCCCcceEEEeCCCcCchhhHH
Confidence 100 000 001112356799999999999999999999999999988888888888999999999999999999865
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcce---eeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCC
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRA---THSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEP 770 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~v---t~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~ 770 (2280)
++.+++.|++++++.+..+..+|..+++.++++++ +++..+|.++..+..............++++||.+++||++
T Consensus 239 -~~~~~~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~lr~~~~gg~~ 317 (631)
T PRK07769 239 -VLLPALLGHYITFMSPAAFVRRPGRWIRELARKPGGTGGTFSAAPNFAFEHAAARGLPKDGEPPLDLSNVKGLLNGSEP 317 (631)
T ss_pred -HHHHHhhCCeEEEEChHHHHhCHHHHHHHHHhhccccCceEeeCCchHHHHHHhhccchhcccCcchhheeeEEeccCC
Confidence 45566778888887765555689999999999886 67777777665554321111000012578999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCce--eec---------------CCCceeeccccCCC
Q 037878 771 VRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPI--ILD---------------WQGRVCCGYVDQND 833 (2280)
Q Consensus 771 l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~--~~~---------------~~g~~~~g~vG~p~ 833 (2280)
+++++.++|.+.+.+.|++...++|.||+||++.+++.......+. ..+ ..+....+++|+|.
T Consensus 318 l~~~~~~~~~~~~~~~g~~~~~i~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~G~~~ 397 (631)
T PRK07769 318 VSPASMRKFNEAFAPYGLPPTAIKPSYGMAEATLFVSTTPMDEEPTVIYVDRDELNAGRFVEVPADAPNAVAQVSAGKVG 397 (631)
T ss_pred CCHHHHHHHHHHHhhcCCChhhcccccchhhheeEEeccCCCCCceEEEEcHHHHhCCCeEecCCCCCCceeEEeCCCcC
Confidence 9999999999987655666667999999999987665432211110 000 01112346799999
Q ss_pred CCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhcc----------CCCCCceeecCcEEEEEC
Q 037878 834 PDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQ----------NNRGRKYTRTGDLGRIID 903 (2280)
Q Consensus 834 pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~----------~~~~~~~yrTGDlgr~~d 903 (2280)
++.+++|+|++++. .+|.|+.|||+|+||+++.||||+|+.|+++|...+. ...+++||||||+|+++|
T Consensus 398 ~~~~~~ivd~~~g~-~~~~ge~GEl~v~gp~v~~GY~~~~~~t~~~f~~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~~d 476 (631)
T PRK07769 398 VSEWAVIVDPETAS-ELPDGQIGEIWLHGNNIGTGYWGKPEETAATFQNILKSRLSESHAEGAPDDALWVRTGDYGVYFD 476 (631)
T ss_pred CCcEEEEEcCCCCc-CCCCCCEEEEEecCCCccccccCChhHHHHHHhhhcccccccccccCcccCCCeeeccccccEEC
Confidence 99999999976554 4579999999999999999999999999999974211 012458999999999999
Q ss_pred CeEEEEecCCCeEEECCeeechHHHHHHHHh-ccCCcCCceeEEEecccccccccc-------ccc--cCCCCceEEEEE
Q 037878 904 GKFFITGRIKDLIIVAGRNVYSADVEKTVES-STEHIRPGCCAVIGVPEEVLSTKG-------ISV--SDGSDQVGLVVI 973 (2280)
Q Consensus 904 G~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~-~p~v~~~~~aaVv~~~~~~~~~~~-------~~~--~~~~~~~~~vv~ 973 (2280)
|+|+|+||+||+||++|+||+|.|||++|.+ ||.|. ...++|++++++.+++.. +.. +...+.+ +++
T Consensus 477 G~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~~p~v~-~~~~av~~v~d~~~~~~~~~~~~~~~~~~~~~~ge~~--~a~ 553 (631)
T PRK07769 477 GELYITGRVKDLVIIDGRNHYPQDLEYTAQEATKALR-TGYVAAFSVPANQLPQVVFDDSHAGLKFDPEDTSEQL--VIV 553 (631)
T ss_pred CEEEEEcccccEEEECCeeeCHHHHHHHHHhcccccc-CCcEEEEEecccccccccccccccccccccCCCCccE--EEE
Confidence 9999999999999999999999999999996 78885 345889998885443221 101 1111222 223
Q ss_pred EEecCC--CCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCCCC
Q 037878 974 AEVRDG--KPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLN 1036 (2280)
Q Consensus 974 ~~~~~~--~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~ 1036 (2280)
++..++ ....+++.+++++++..+++.+...+.++..++||+|++|||+|++|+++|.++.+.
T Consensus 554 v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~~~~v~~~~lP~t~~GKi~r~~l~~~~~~~~~~ 618 (631)
T PRK07769 554 AERAPGAHKLDPQPIADDIRAAIAVRHGVTVRDVLLVPAGSIPRTSSGKIARRACRAAYLDGSLR 618 (631)
T ss_pred EEecCccccccHHHHHHHHHHHHHHHcCCCccEEEEECCCccccCCCcHHHHHHHHHHHHcCCCc
Confidence 333333 223468889999999876665444555555468999999999999999998776543
No 23
>cd00328 catalase Catalase heme-binding enzyme. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. Most catalases exist as tetramers of 65KD subunits containing a protoheme IX group buried deep inside the structure. In eukaryotic cells, catalases are located in peroxisomes.
Probab=100.00 E-value=2.9e-61 Score=587.59 Aligned_cols=291 Identities=21% Similarity=0.302 Sum_probs=267.2
Q ss_pred eecccccccccccceeEEEEecCCCCCCcCcccCC-CceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCcc
Q 037878 1711 KVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHP-GKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSSL 1787 (2280)
Q Consensus 1711 ~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~-g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~~ 1787 (2280)
+++||.+||||+|++|+|++++++++++++++|++ |++|||++||||++|.+. |+.+|+|||||||+++ +| +
T Consensus 1 riPER~~HAKG~ga~G~F~v~~d~~~~t~a~~f~~~g~~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~-~g----~ 75 (433)
T cd00328 1 RIPERVVHARGAGAFGYFTAYGDWSDISAAAFFSAIGKKTPVFVRFSTVVGGAGSADTVRDPHGFATKFYTE-EG----N 75 (433)
T ss_pred CCCcccccCcccceEEEEEECCChhHHHhhhhccCCCceeeEEEecccCCCCCCCCccCCCCCeeEEEEecC-CC----c
Confidence 57999999999999999999999999999999965 999999999999988754 9999999999999986 33 4
Q ss_pred eeeecccccccccCChhhHHHHHhhccchhhhhhcc----------Cc---chhhhhhhcccCCCccccceeeeeeeEEE
Q 037878 1788 LDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKR----------VP---HIRDAVWKSLRLSDSYAEMHYYSNICRLF 1854 (2280)
Q Consensus 1788 ~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~----------~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~~ 1854 (2280)
|||+|||+|+||++|+++|++|+++.+++|++.+++ +| +....+.+.+++|.||++|+|||+|+|+|
T Consensus 76 ~D~v~nn~PvFf~~d~~~F~~~i~a~k~~P~t~~~d~~~~~~f~~~~Pes~h~~~~~~s~r~~P~sy~~~~~~gvhtf~~ 155 (433)
T cd00328 76 FDLVGNNTPIFFIRDAIKFPDFIHAQKPNPQTALPDADRFWDFLSLRPESLHQVSFLFSDRGIPAAYRHMNGYGSHTFKL 155 (433)
T ss_pred eeEeeecCceeecCCHHHhhHhhhccCCCCCCCCCCHHHHHHHHhcCHHHHHHHHHHhcCCCCCCCcccCCccccceEEE
Confidence 999999999999999999999999999888555443 44 44445566668999999999999999999
Q ss_pred EEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCC
Q 037878 1855 RFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIP 1934 (2280)
Q Consensus 1855 ~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~ 1934 (2280)
+|++|+.+||||||+|.+|+++++.+|+.+... +++|||++||++||++|+.++|+|+||+++++
T Consensus 156 vn~~G~~~~vk~~~~p~~G~~~l~~eea~~~~~---------------~~~d~l~~dL~~~i~~G~~P~w~l~vQv~~~~ 220 (433)
T cd00328 156 VNANGKVHYVKFHWKTDQGIANLVWEEAARLAG---------------EDPDYHRQDLFEAIEAGDYPSWELYIQVMTFN 220 (433)
T ss_pred EcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhhc---------------CCCchhhhhHHHHHhCCCCceEEEEEEEcCHH
Confidence 999999999999999999999999998875532 35679999999999999988999999999999
Q ss_pred CccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHHh
Q 037878 1935 QDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEI 2012 (2280)
Q Consensus 1935 d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~ 2012 (2280)
|...++|+++|+||.||++++|++++|+|+||+++++ ++|||++|+|.++++||+||+ |||||+|.++|.+
T Consensus 221 d~~~~~f~~~D~Tk~WP~~~~p~i~vG~l~Ln~n~~n~f~e~eq~aF~P~~lvpGI~~S~-------DplLq~R~faY~d 293 (433)
T cd00328 221 DAEKFPFNPLDPTKVWPEELVPLIVVGKLVLNRNPLNFFAEVEQAAFDPGHIVPGVEFSE-------DPLLQGRLFSYAD 293 (433)
T ss_pred HHhcCCCCCCcCCcccCCcCcccEEeEEEEeecCCcchhhhhhhhccCCcCCCCCccCCC-------Ccccccccccchh
Confidence 9999999999999999999999999999999999988 899999999999999999999 9999999999999
Q ss_pred hhHhhcCCCCchhHHHhhhccccc
Q 037878 2013 CQHLRNGEPLPESWRIFLEQSDVK 2036 (2280)
Q Consensus 2013 s~~~R~~~~~~~~~~~~~~~~~~~ 2036 (2280)
|+++|+|.+ ++|.+||
T Consensus 294 s~~~R~g~N--------~~qlpvN 309 (433)
T cd00328 294 TQLYRLGPN--------FQQLPVN 309 (433)
T ss_pred hhhcCCCCC--------HhhCccc
Confidence 999999999 5777777
No 24
>PTZ00237 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-58 Score=623.56 Aligned_cols=517 Identities=17% Similarity=0.192 Sum_probs=385.8
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
...+++++++.....++++|+++..+++...+++||+||.++++++|+.|+++ |+++||+|+++++|++|+++++||
T Consensus 60 ~~~~~l~~~~~~~~~~~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~GDrV~i~~~n~~e~~~~~lA 136 (647)
T PTZ00237 60 TCYNVLDIHVKNPLKRDQDALIYECPYLKKTIKLTYYQLYEKVCEFSRVLLNL---NISKNDNVLIYMANTLEPLIAMLS 136 (647)
T ss_pred HHHHHHHHhhcccCCCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHH
Confidence 34567777654311378999988765443347899999999999999999998 999999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccc---------hhhccC-CCC--CC-Ccccc---c-
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYH---------SAVRVG-SWP--NL-PWLHT---D- 612 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~---------~~~~~~-~~~--~~-~~~~~---~- 612 (2280)
|+++|++++|+++..+.++ +.++++++++++++++.... +.+... ... .. ..+.. .
T Consensus 137 ~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~ 209 (647)
T PTZ00237 137 CARIGATHCVLFDGYSVKS-------LIDRIETITPKLIITTNYGILNDEIITFTPNLKEAIELSTFKPSNVITLFRNDI 209 (647)
T ss_pred HHHhCcEEEeeCCCCCHHH-------HHHHHHhcCCCEEEEcccceeCCceechHHHHHHHHhcccCCCCEEEEEEcCCc
Confidence 9999999999999999887 88999999999999875211 000000 000 00 00000 0
Q ss_pred ----cc--------ccc---cccc-------ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHH-HHHHHHHHHH
Q 037878 613 ----SW--------VKN---SKNL-------LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGG-LIHNVKLMRK 669 (2280)
Q Consensus 613 ----~~--------~~~---~~~~-------~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~-l~~~~~~~~~ 669 (2280)
+. ... ..+. ............++|+++|+|||||||+||||+++|++ +.+.......
T Consensus 210 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~IlyTSGTTG~PKgV~~sh~~~l~~~~~~~~~ 289 (647)
T PTZ00237 210 TSESDLKKIETIPTIPNTLSWYDEIKKIKENNQSPFYEYVPVESSHPLYILYTSGTTGNSKAVVRSNGPHLVGLKYYWRS 289 (647)
T ss_pred ccccccccccccCCCcccccHHHHHhhhccccCCCCCCceeeCCCCcEEEEEcCCCCCCCCeEEEcCcHHHHHHHHHHHH
Confidence 00 000 0000 00000112345679999999999999999999999999 5444444445
Q ss_pred HcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCcccccc--CHHHHHHHHhhcceeeecCcHHHHHHHHHHHh
Q 037878 670 RYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIK--NPLLWLETMSKYRATHSAGPNFAFELMVRRLE 747 (2280)
Q Consensus 670 ~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~--~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~ 747 (2280)
.+....++++++.+|++|+++. ..++.+|+.|+++++++...+.. .+..+++.++++++|++.++|++++.+.+...
T Consensus 290 ~~~~~~~d~~~~~~~~~w~~~~-~~~~~~l~~G~t~v~~~~~~~~p~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~ 368 (647)
T PTZ00237 290 IIEKDIPTVVFSHSSIGWVSFH-GFLYGSLSLGNTFVMFEGGIIKNKHIEDDLWNTIEKHKVTHTLTLPKTIRYLIKTDP 368 (647)
T ss_pred hcCCCCCcEEEEcCCCceEeeH-HHHHHHHhCCcEEEEeCCCCCCCCCchHHHHHHHHHhCeEEEEeCHHHHHHHHhhCc
Confidence 5667788999999999998764 46889999999999887532211 26789999999999999999999998876432
Q ss_pred cccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeec
Q 037878 748 SSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCG 827 (2280)
Q Consensus 748 ~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g 827 (2280)
.........++++||.+++|||++++++.+++.+.+ ++.++|.||+||++..++..... .....+
T Consensus 369 ~~~~~~~~~~l~~Lr~i~~~G~~l~~~~~~~~~~~~------g~~i~~~yG~TE~~~~~~~~~~~---------~~~~~~ 433 (647)
T PTZ00237 369 EATIIRSKYDLSNLKEIWCGGEVIEESIPEYIENKL------KIKSSRGYGQTEIGITYLYCYGH---------INIPYN 433 (647)
T ss_pred cccccccccCcchheEEEecCccCCHHHHHHHHHhc------CCCEEeeechHHhChhhhccCCC---------CCCCCC
Confidence 211111235789999999999999999999988764 46799999999998654332110 122347
Q ss_pred cccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCC---CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-C
Q 037878 828 YVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSP---SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-D 903 (2280)
Q Consensus 828 ~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp---~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-d 903 (2280)
++|+|+||++++|+|+++ . .++.|+.|||+|+|| +++.||||||+.|++.|.. .+|||+|||+|+++ |
T Consensus 434 s~G~p~~g~~~~i~d~~g-~-~~~~ge~GEl~v~~p~~p~~~~gy~~~~~~~~~~f~~------~~g~~~TGDlg~~d~d 505 (647)
T PTZ00237 434 ATGVPSIFIKPSILSEDG-K-ELNVNEIGEVAFKLPMPPSFATTFYKNDEKFKQLFSK------FPGYYNSGDLGFKDEN 505 (647)
T ss_pred CCccCcCCceEEEECCCC-C-CCCCCCceEEEEeccCCchhhCceeCCHHHHHHHHhC------CCCEEECCcEEEECCC
Confidence 899999999999999865 3 347899999999986 7899999999999987742 24799999999997 9
Q ss_pred CeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC
Q 037878 904 GKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD 983 (2280)
Q Consensus 904 G~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~ 983 (2280)
|+++|+||+||+||++|+||+|.|||++|.+||.|.+ |+|++++++..+ ....++++..+..++...+
T Consensus 506 G~l~i~GR~dd~i~~~G~rI~p~eIE~~l~~~p~V~e---aavvg~~~~~~g---------~~~~a~Vv~~~~~~~~~~~ 573 (647)
T PTZ00237 506 GYYTIVSRSDDQIKISGNKVQLNTIETSILKHPLVLE---CCSIGIYDPDCY---------NVPIGLLVLKQDQSNQSID 573 (647)
T ss_pred CeEEEEeccCCEEEECCEEeCHHHHHHHHHhCCCcee---eEEEeeEcCCCC---------CEEEEEEEeccCccccCCC
Confidence 9999999999999999999999999999999999976 899998886433 1233333322111222222
Q ss_pred -HHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 984 -KDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 984 -~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+++.+.+++.+..++.....|..++.+++||+|+||||+|+.|++.+..
T Consensus 574 ~~~l~~~i~~~~~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~Lr~~~~~ 623 (647)
T PTZ00237 574 LNKLKNEINNIITQDIESLAVLRKIIIVNQLPKTKTGKIPRQIISKFLND 623 (647)
T ss_pred HHHHHHHHHHHHHhhcCccccCcEEEEcCCCCCCCCccEeHHHHHHHHcC
Confidence 4566667777666666666666677779999999999999999988643
No 25
>cd08157 catalase_fungal Fungal catalases similar to yeast catalases A and T. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes, which is involved in the protection of cells from the toxic effects of peroxides. It catalyzes the conversion of hydrogen peroxide to water and molecular oxygen. Catalases also utilize hydrogen peroxide to oxidize various substrates such as alcohol or phenols. This family of fungal catalases has a relatively small subunit size, and binds a protoheme IX (heme b) group buried deep inside the structure. Fungal catalases also bind NADPH as a second redox-active cofactor. They form tetramers; in eukaryotic cells, catalases are typically located in peroxisomes. Saccharomyces cerevisiae catalase T is found in the cytoplasm, though.
Probab=100.00 E-value=2.2e-60 Score=588.58 Aligned_cols=298 Identities=20% Similarity=0.308 Sum_probs=268.5
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccCC-CceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHP-GKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~-g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|++||||+|++|+|+|++++++++++++|+. |++|||++||||++|++. |+.+|+|||||||+++ +|
T Consensus 16 eripeR~vHAKG~ga~G~F~vt~d~s~~t~a~~f~~~gk~~pv~vRFSt~~g~~~~~D~~rd~RG~AiKf~t~-eg---- 90 (451)
T cd08157 16 ERIPERVVHAKGAGAYGEFEVTDDISDITSADMLQGVGKKTPCLVRFSTVGGEKGSADTVRDPRGFAVKFYTE-EG---- 90 (451)
T ss_pred CCCccccccCCcccEEEEEEECCChhHHHhhhhccCCCceeeEEEecccCCCCCCCCCcCCCcCeEEEEEEcC-CC----
Confidence 568999999999999999999999999999999965 999999999999999864 9999999999999986 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhh----------hccCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEH----------VKRVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~----------~~~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||||||+||||++|+++|++|+++.+++|++. +..+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 91 ~~DlV~nn~PvFfird~~~F~~~i~a~~~~p~~~~~d~~~~~df~~~~Pes~~~~~~l~s~~g~p~sy~~~~~~g~htf~ 170 (451)
T cd08157 91 NWDWVFNNTPVFFIRDPIKFPHFIHSQKRDPQTNLKDSTMFWDYLSQNPESIHQVMILFSDRGTPASYRSMNGYSGHTYK 170 (451)
T ss_pred ceeeeeecCcccccCCHHHHHHHHHhcccCCCCCCCChHHHHHHHhhChHHHHHHHHHhccCCCCCCcccCCccccceeE
Confidence 4999999999999999999999999999887443 34455 3444455567899999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||+|+|.+|+++++.+|+.+... ..+|||++||+++|++|+.++|+|+||++++
T Consensus 171 ~vn~~G~~~~vK~~~~P~~G~~~l~~~ea~~~~~---------------~~~d~l~~dL~~~i~~g~~p~w~l~vQl~~~ 235 (451)
T cd08157 171 WVNPDGSFKYVQFHLKSDQGPKFLTGEEAARLAG---------------SNPDYATKDLFEAIERGDYPSWTVYVQVMTP 235 (451)
T ss_pred EECCCCCEEEEEEEEEECCCcccCCHHHHHhhcC---------------CCCChhHhhHHHHHhcCCCceEEEEEEEeCH
Confidence 9999999999999999999999999888776521 1467999999999999998899999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|....+|+++|+||+|||+++|+++||+|+||+++++ ++|||++|+|||+++||+||+ |||||+|+++|.
T Consensus 236 ~d~~~~~f~i~D~Tk~WPe~~~P~~~vG~l~Ln~~~~~~~~e~eq~aF~P~~~vpGi~ps~-------DpiLq~R~~aY~ 308 (451)
T cd08157 236 EQAEKLRFNIFDLTKVWPHKDFPLRPVGKLTLNENPKNYFAEIEQAAFSPSHMVPGIEPSA-------DPVLQARLFSYP 308 (451)
T ss_pred HHHhhCCCCCCcCCcccCcccCccEEeEEEEecCCChhHHhHhhhhcccccccCCCccCCC-------CchhcccccchH
Confidence 99989999999999999999999999999999999988 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCC-CCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSG-CPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 2044 (2280)
+|+++|+|.+ ++|.+|| .|- |++
T Consensus 309 ds~~~R~g~N--------~~qlPvN--~p~~~~~ 332 (451)
T cd08157 309 DAHRHRLGPN--------YQQLPVN--RPKTSPV 332 (451)
T ss_pred HHHHhccCCC--------hhhCCCC--CCCcCCC
Confidence 9999999998 5666666 444 443
No 26
>TIGR02316 propion_prpE propionate--CoA ligase. This family contains one of three readily separable clades of proteins in the group of acetate and propionate--CoA ligases. Characterized members of this family act on propionate. From propionyl-CoA, there is a cyclic degradation pathway: it is ligated by PrpC to the TCA cycle intermediate oxaloacetate, acted upon further by PrpD and an aconitase, then cleaved by PrpB to pyruvate and the TCA cycle intermediate succinate.
Probab=100.00 E-value=4.9e-57 Score=616.07 Aligned_cols=514 Identities=20% Similarity=0.222 Sum_probs=387.6
Q ss_pred HHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHH
Q 037878 471 LDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGC 550 (2280)
Q Consensus 471 l~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~ 550 (2280)
..+++++++.. .|+++|+.+.+++....+++||+||.++++++|+.|++. |+++||+|+++++|++++++++|||
T Consensus 54 ~~~~l~~~~~~--~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~Gd~V~i~~~n~~e~v~~~lA~ 128 (628)
T TIGR02316 54 CHNALDRHLDE--RGEQLALVTVSSETGQERTLTYRQLHREVNVFASALRAL---GVGRGDRVLIYMPMIAEAVFAMLAC 128 (628)
T ss_pred HHHHHHHHhCc--CCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 45667666654 489999988653322237899999999999999999998 9999999999999999999999999
Q ss_pred HHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh---------h----ccCCCCCCCcccccccccc
Q 037878 551 MRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA---------V----RVGSWPNLPWLHTDSWVKN 617 (2280)
Q Consensus 551 l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~---------~----~~~~~~~~~~~~~~~~~~~ 617 (2280)
+++|++++|+++.++.++ +..+++++++++++++...... + ..........+..+.....
T Consensus 129 ~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 201 (628)
T TIGR02316 129 ARIGAIHSVVFGGFASHS-------LALRIDDATPKLIVSADAGMRGGKVIPYKPLLDAAIAEAQHPPPHVLLVDRGLAP 201 (628)
T ss_pred HHhCCEEEecCCCCCHHH-------HHHHHHhcCceEEEECCccccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 999999999999999888 8899999999999997542110 0 0000000001111100000
Q ss_pred ----------cccccc---ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHH-HHHHHHHHHcCCCCCcEEEEEc
Q 037878 618 ----------SKNLLA---ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLI-HNVKLMRKRYKSTSKTVLVSWL 683 (2280)
Q Consensus 618 ----------~~~~~~---~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~-~~~~~~~~~~~~~~~d~~l~~~ 683 (2280)
...... ....+.....+++++||+|||||||.||||+++|++++ +........+++.++|++++.+
T Consensus 202 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~ 281 (628)
T TIGR02316 202 MRLIPGRDVDYAALRTQHEDAQVPVEWLESNEPSYILYTSGTTGKPKGVQRDVGGYAVALALSMWAIFGIRAGQVMFSAS 281 (628)
T ss_pred cCcccCccccHHHHhhccccCCCCceecCCCCcEEEEECCCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCcEEEEcC
Confidence 000000 00111122467999999999999999999999999975 4445556678889999999999
Q ss_pred CchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccE
Q 037878 684 PQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKF 763 (2280)
Q Consensus 684 pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~ 763 (2280)
|++|+++....++.+|+.|++++++++.....++..+++.++++++|++..+|++++.+.+.... .....++++||.
T Consensus 282 ~~~~~~g~~~~~~~~L~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---~~~~~~l~~lr~ 358 (628)
T TIGR02316 282 DVGWVVGHSYIVYAPLLAGAATVLYEGLPTNPDPGVWWSIVERYGVRTMFSAPTAIRVLKKQDAA---WLRKHDLSSLHW 358 (628)
T ss_pred CCCeeehhhHHHHHHHhccceEEEeCCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCCc---ccccCCccceeE
Confidence 99999998778999999999999987654456899999999999999999999999887653211 122357899999
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcC
Q 037878 764 LMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNP 843 (2280)
Q Consensus 764 l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~ 843 (2280)
+++|||++++++.+++.+.+ +..+++.||+||++..++..... ... .....+++|+|+||++++|+|+
T Consensus 359 ~~~gGe~l~~~~~~~~~~~~------~~~~~~~yG~TE~~~~~~~~~~~-~~~-----~~~~~gs~G~p~~g~~v~i~d~ 426 (628)
T TIGR02316 359 LFLAGEPLDEPTAHWITDGL------GKPVIDNYWQTETGWPVLAIMPG-LDL-----KPVKLGSPGLPMYGYHLRVLDE 426 (628)
T ss_pred EEEecCCCCHHHHHHHHHHh------CCCEEecccccccCceeecCCCC-CCc-----CCCCCCCcccCcCCceEEEEEC
Confidence 99999999999998888764 45799999999998544332111 000 0123478899999999999998
Q ss_pred CCCcccCCCCCeeEEEEcCC---CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEEC
Q 037878 844 ETSEEIGEPGKEGEVWISSP---SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVA 919 (2280)
Q Consensus 844 ~~~~~~~p~G~~GEL~i~Gp---~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~ 919 (2280)
+++.. ++.|+.|||+|+|| +++.|||++++.+.+.|... .+++||+|||+|+++ ||+++|+||+|||||++
T Consensus 427 ~~g~~-~~~g~~Gel~v~gp~~~g~~~~~~~~~~~~~~~~~~~----~~~~~~~TGD~g~~d~dG~l~i~GR~dd~ik~~ 501 (628)
T TIGR02316 427 ATGRP-CGPNEKGVLTVVPPLPPGCLSTVWGDDARFLKTYWSH----FKRPLYSSFDWGIRDEDGYTFILGRTDDVINVA 501 (628)
T ss_pred CCCCC-CCCCCcEEEEEecCCCccccccccCChHHHHHhhhhc----CCCCEEECCceEEEcCCCcEEEEEcCcceEEeC
Confidence 54444 47899999999998 67899999998877766432 235899999999997 99999999999999999
Q ss_pred CeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-----CCHHHHHHHHHHH
Q 037878 920 GRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-----VDKDVIENIKTRV 994 (2280)
Q Consensus 920 G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-----~~~~l~~~l~~~l 994 (2280)
|+||+|.|||++|.+||+|.+ |+|++++++..+ ..+.++++ ..++.. ....+.+.+++.+
T Consensus 502 G~rv~~~eIE~~l~~~p~V~e---a~Vvg~~d~~~g----------~~~~~~vv--~~~~~~~~~~~~~~~~~~~i~~~~ 566 (628)
T TIGR02316 502 GHRLGTREIEESVSSHPSVAE---VAVVGVHDELKG----------QVAVVFAI--LKESDSAGDAHDPHAVETGMMDCV 566 (628)
T ss_pred CEEeCHHHHHHHHHhCCCcce---EEEEeeecCCCC----------eEEEEEEE--EcCCcccccccchHHHHHHHHHHH
Confidence 999999999999999999975 899998876432 22222222 222211 1124455666666
Q ss_pred HHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 995 VEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 995 ~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.++++.++.|..++.+++||+|+|||++|+.|++.+.
T Consensus 567 ~~~L~~~~~P~~v~~v~~lP~t~sGKi~r~~L~~~~~ 603 (628)
T TIGR02316 567 VRQLGAVARPARVYFVAALPKTRSGKLLRRSIQALAE 603 (628)
T ss_pred HHhcCCCcCCCEEEEcCCCCCCCchHHHHHHHHHHHc
Confidence 6666555666666777999999999999999988754
No 27
>PRK12476 putative fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=6.6e-57 Score=613.49 Aligned_cols=548 Identities=30% Similarity=0.481 Sum_probs=401.3
Q ss_pred cCcccccCCCCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCC---ceeeeccHHHHHHHHHHHHHHHHhcCCCCCC
Q 037878 452 RNFKELEELPGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEG---VAVNQSTYEELDANASRIAHKLLTSRKPVIK 528 (2280)
Q Consensus 452 ~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g---~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~ 528 (2280)
|....+.+-...++++..++.+++++++++ .|+++|+.+.+.++ ...+.+||+||.++++++|++|.+. ++
T Consensus 17 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~----~~ 90 (612)
T PRK12476 17 RIEDCLDADGNIALPPGTTLISLIERNIAN--VGDTVAYRYLDHSHSAAGCAVELTWTQLGVRLRAVGARLQQV----AG 90 (612)
T ss_pred eccCcccccccccCCccCcHHHHHHHHHHh--CCCceEEEEEccCCCCCCcceEEeHHHHHHHHHHHHHHHHHh----cC
Confidence 444445554545566677899999888766 48999998754211 1235899999999999999999864 89
Q ss_pred CCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeC-CCCCc--cccchhhHHHHHHHHhhcCCeEEEEccccchhhcc--CCC
Q 037878 529 PGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPV-LPPDP--LQRGGQALLKIENISKSCGAVAILSTIGYHSAVRV--GSW 603 (2280)
Q Consensus 529 ~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpl-d~~~p--~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~--~~~ 603 (2280)
+||+|+++++|++++++++|||+++|+++||+ ++..+ .++ +.++++++++++++++......+.. ...
T Consensus 91 ~gd~V~l~~~n~~e~~~~~lA~~~aG~v~vpl~~~~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~ 163 (612)
T PRK12476 91 PGDRVAILAPQGIDYVAGFFAAIKAGTIAVPLFAPELPGHAER-------LDTALRDAEPTVVLTTTAAAEAVEGFLRNL 163 (612)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHcCceeEecCCCCcchhHHH-------HHHHHHhCCCCEEEEcHHHHHHHHHHHhhc
Confidence 99999999999999999999999999999999 56665 444 8899999999999997654332211 000
Q ss_pred CC---CCccccccccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC-CCCCcEE
Q 037878 604 PN---LPWLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK-STSKTVL 679 (2280)
Q Consensus 604 ~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~-~~~~d~~ 679 (2280)
+. ...+..++... . ...........++|+++|+|||||||.||||++||+++.+.+......++ +.+++++
T Consensus 164 ~~~~~~~~i~~~~~~~----~-~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~ 238 (612)
T PRK12476 164 PRLRRPRVIAIDAIPD----S-AGESFVPVELDTDDVSHLQYTSGSTRPPVGVEITHRAVGTNLVQMILSIDLLDRNTHG 238 (612)
T ss_pred ccccCceEEEeccccc----c-ccccccCCCCCCCceEEEEeCCCCCCCCceEEeeHHHHHHHHHHHHHHhccCCCCceE
Confidence 10 11111111110 0 00011112346789999999999999999999999999888777666677 7889999
Q ss_pred EEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHh--hcceeeecCcHHHHHHHHHHHhcccccccccC
Q 037878 680 VSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMS--KYRATHSAGPNFAFELMVRRLESSKDKVRSFD 757 (2280)
Q Consensus 680 l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~--~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~ 757 (2280)
++++|++|++++...++.++ .|+++++..+..+..+|..|++.+. ++++|++..+|.++..++....... .....+
T Consensus 239 l~~~Pl~h~~g~~~~~~~~~-~gg~~~~~~~~~~~~~p~~~~~~i~~~~~~~t~~~~~P~~~~~l~~~~~~~~-~~~~~~ 316 (612)
T PRK12476 239 VSWLPLYHDMGLSMIGFPAV-YGGHSTLMSPTAFVRRPQRWIKALSEGSRTGRVVTAAPNFAYEWAAQRGLPA-EGDDID 316 (612)
T ss_pred EEeCCcccccchHHHHHHHh-cCCeEEEECHHHHHHHHHHHHHHHhhhccCCeEEEeCCcHHHHHHHHhcChh-hhcCcc
Confidence 99999999999865444445 5555555555445558999999994 5889999888887766654311100 011246
Q ss_pred CCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCc---------------eeec--C
Q 037878 758 LSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKP---------------IILD--W 820 (2280)
Q Consensus 758 l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~---------------~~~~--~ 820 (2280)
++++| +++||+++++++.++|.+.+.+.|.+...++|.||+||++..++.......+ .... .
T Consensus 317 l~~lr-~~~gg~~~~~~~~~~~~~~~~~~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 395 (612)
T PRK12476 317 LSNVV-LIIGSEPVSIDAVTTFNKAFAPYGLPRTAFKPSYGIAEATLFVATIAPDAEPSVVYLDREQLGAGRAVRVAADA 395 (612)
T ss_pred hhHhe-EEecccCCCHHHHHHHHHHHHhcCCCccccccccchhhhheeeeccCCCCCceEEEEcHHHhhCCCeeecCCCC
Confidence 88999 9999999999999999998765566667799999999998665432111000 0000 0
Q ss_pred CCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhcc----C-------CCC
Q 037878 821 QGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQ----N-------NRG 889 (2280)
Q Consensus 821 ~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~----~-------~~~ 889 (2280)
......+++|+|+||++++|+|++++. .+|.|+.|||+|+|++++.||||+|+.|+++|.+.+. + ..+
T Consensus 396 ~~~~~~~~~G~~~~g~~v~ivd~~~g~-~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~~~~~~~~~g~~~~~~~~~ 474 (612)
T PRK12476 396 PNAVAHVSCGQVARSQWAVIVDPDTGA-ELPDGEVGEIWLHGDNIGRGYWGRPEETERTFGAKLQSRLAEGSHADGAADD 474 (612)
T ss_pred CCcceeEeCCCcCCCCEEEEEeCCCCc-CCCCCCEEEEEEcCCcccccccCChHHHHHHHhhhhccccccccccccccCC
Confidence 011124678999999999999987443 4579999999999999999999999999999964211 0 123
Q ss_pred CceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHh-ccCCcCCceeEEEeccccccccccccccCCCCce
Q 037878 890 RKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVES-STEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQV 968 (2280)
Q Consensus 890 ~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~-~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~ 968 (2280)
++||||||+|+++||.|+|+||+||+||++|+||+|.|||++|.+ ||.|.+ ..++|++++++. + +.+
T Consensus 475 ~~w~~TGDlg~~~dG~l~i~GR~~d~I~~~G~~I~p~eIE~~l~~~~p~V~~-~~v~v~~~~~~~-~----------~~~ 542 (612)
T PRK12476 475 GTWLRTGDLGVYLDGELYITGRIADLIVIDGRNHYPQDIEATVAEASPMVRR-GYVTAFTVPAED-N----------ERL 542 (612)
T ss_pred CCeeeccccceeECCEEEEEeccCcEEEECCcccCHHHHHHHHHHhcccccC-CcEEEEEecCCC-c----------ceE
Confidence 579999999998999999999999999999999999999999985 798853 336667766542 1 222
Q ss_pred EEEEEEEecCCC--CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCCC
Q 037878 969 GLVVIAEVRDGK--PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTL 1035 (2280)
Q Consensus 969 ~~vv~~~~~~~~--~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~ 1035 (2280)
+++++..++. ...+++.+.+++++.+.++++...+.++..++||+|++|||||++|++++.++.+
T Consensus 543 --~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~~~~lP~t~~GKi~r~~L~~~~~~~~~ 609 (612)
T PRK12476 543 --VIVAERAAGTSRADPAPAIDAIRAAVSRRHGLAVADVRLVPAGAIPRTTSGKLARRACRAQYLDGRL 609 (612)
T ss_pred --EEEEEecCCcccccHHHHHHHHHHHHHHhhCCcceEEEEECCCCcCcCCchHHHHHHHHHHHHcCCC
Confidence 2222333332 2336788899999998787655566666666899999999999999999877754
No 28
>TIGR02188 Ac_CoA_lig_AcsA acetate--CoA ligase. This model describes acetate-CoA ligase (EC 6.2.1.1), also called acetyl-CoA synthetase and acetyl-activating enzyme. It catalyzes the reaction ATP + acetate + CoA = AMP + diphosphate + acetyl-CoA and belongs to the family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=100.00 E-value=9.2e-57 Score=614.66 Aligned_cols=513 Identities=22% Similarity=0.254 Sum_probs=395.0
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
...+.++++++. +|+++|+.+.+++....+++||+||.++++++|+.|++. |+++||+|+++++|++++++++||
T Consensus 58 ~~~~~l~~~~~~--~p~~~Al~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~~~~~lA 132 (625)
T TIGR02188 58 VSYNCVDRHLEA--RPDKVAIIWEGDEPGEVRKITYRELHREVCRFANVLKSL---GVKKGDRVAIYMPMIPEAAIAMLA 132 (625)
T ss_pred HHHHHHHHhhcc--CCCCeEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHH
Confidence 345667666654 489999998765333357899999999999999999998 999999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh---------hcc--CCCC-CCC-cccccc---
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA---------VRV--GSWP-NLP-WLHTDS--- 613 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~---------~~~--~~~~-~~~-~~~~~~--- 613 (2280)
|+++|++++|+++..+.++ +.+++++++++++++++..... +.. ...+ .+. .+....
T Consensus 133 ~~~~Gav~v~i~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (625)
T TIGR02188 133 CARIGAIHSVVFGGFSAEA-------LADRINDAGAKLVITADEGLRGGKVIPLKAIVDEALEKCPVSVEHVLVVRRTGN 205 (625)
T ss_pred HHHhCCEEeccCCCCCHHH-------HHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHHhCCCCccEEEEEcCCCC
Confidence 9999999999999999888 8899999999999997643210 000 0001 010 000000
Q ss_pred ---c-------cccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCcEEEEE
Q 037878 614 ---W-------VKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVK-LMRKRYKSTSKTVLVSW 682 (2280)
Q Consensus 614 ---~-------~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~-~~~~~~~~~~~d~~l~~ 682 (2280)
+ ....... ...........++|++||+|||||||+||||+++|++++.... .....+++.++|++++.
T Consensus 206 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~ 284 (625)
T TIGR02188 206 PVPWVEGRDVWWHDLMAK-ASAYCEPEPMDSEDPLFILYTSGSTGKPKGVLHTTGGYLLYAAMTMKYVFDIKDGDIFWCT 284 (625)
T ss_pred CcCccccccccHHHHHhh-cCCCCCceecCCCCceEEEecCCCCCCCCeEEECccHhHHHHHHHHHhccCCCCCcEEEEC
Confidence 0 0000000 0011122345678999999999999999999999999765443 34556788899999999
Q ss_pred cCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCcc
Q 037878 683 LPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMK 762 (2280)
Q Consensus 683 ~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr 762 (2280)
+|++|.++....++.+|..|++++++++.....+|..+++.++++++|++.++|++++.+.+..... ....++++||
T Consensus 285 ~~~~~~~g~~~~~~~~l~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---~~~~~l~~lr 361 (625)
T TIGR02188 285 ADVGWITGHSYIVYGPLANGATTVMFEGTPTYPDPGRFWEIIEKHKVTIFYTAPTAIRALMRLGDEW---VKKHDLSSLR 361 (625)
T ss_pred CCchhhhccHHHHHHHHHcCCeEEEECCCCCCCChhHHHHHHHHhCCeEEEeCHHHHHHHHhcCCcc---cccCCcccee
Confidence 9999999877778999999999999875444458999999999999999999999998887643221 1235688999
Q ss_pred EEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEc
Q 037878 763 FLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVN 842 (2280)
Q Consensus 763 ~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd 842 (2280)
.+++|||++++++.+++.+.++ ..++.++|.||+||++..++....... ....+++|+|++|++++|+|
T Consensus 362 ~i~~~G~~l~~~~~~~~~~~~~---~~~~~i~~~yG~TE~~~~~~~~~~~~~--------~~~~~~~G~p~~g~~~~i~d 430 (625)
T TIGR02188 362 LLGSVGEPINPEAWMWYYKVVG---KERCPIVDTWWQTETGGIMITPLPGAT--------PTKPGSATLPFFGIEPAVVD 430 (625)
T ss_pred EEEEecCCCCHHHHHHHHHHcC---CCCCceEecccccccCCceeecCCCCC--------CcCCCcccCCcCCceEEEEC
Confidence 9999999999999999988753 235789999999999876543321111 12347799999999999999
Q ss_pred CCCCcccCC-CCCeeEEEEcC--CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE
Q 037878 843 PETSEEIGE-PGKEGEVWISS--PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV 918 (2280)
Q Consensus 843 ~~~~~~~~p-~G~~GEL~i~G--p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi 918 (2280)
+++ ..++ +|+.|||+|+| |++++|||++|+.+.+.|.. ..++||+|||+|+++ ||.++|+||+||+||+
T Consensus 431 ~~g--~~~~~~g~~GeL~v~~p~p~~~~gy~~~~~~~~~~~~~-----~~~g~~~TGDl~~~d~dG~l~i~GR~dd~i~~ 503 (625)
T TIGR02188 431 EEG--NPVEGPGEGGYLVIKQPWPGMLRTIYGDHERFVDTYFS-----PFPGYYFTGDGARRDKDGYIWITGRVDDVINV 503 (625)
T ss_pred CCC--CCCCCCCCeEEEEEccCCCcccccccCChHHHHHHHhc-----cCCCEEECCceEEEcCCCcEEEEecccCEEEe
Confidence 765 3346 89999999999 68999999999988887753 124799999999997 9999999999999999
Q ss_pred CCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhc
Q 037878 919 AGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEH 998 (2280)
Q Consensus 919 ~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~ 998 (2280)
+|+||+|.|||++|.+||+|.+ |+|++++++..+ +.+.+++ ...++.....++.+.+++.+.+++
T Consensus 504 ~G~ri~p~eIE~~l~~~p~V~e---~~vvg~~~~~~g----------~~~~a~v--v~~~~~~~~~~~~~~l~~~~~~~l 568 (625)
T TIGR02188 504 SGHRLGTAEIESALVSHPAVAE---AAVVGIPDDIKG----------QAIYAFV--TLKDGYEPDDELRKELRKHVRKEI 568 (625)
T ss_pred CCEEECHHHHHHHHHhCCCcce---EEEEeeEcCCCC----------eEEEEEE--EeCCCCCCCHHHHHHHHHHHHhhc
Confidence 9999999999999999999975 899998876432 2222222 233444344455667777777766
Q ss_pred CcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 999 GVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 999 ~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
...+.|..++.+++||+|+|||++|+.|++.+.
T Consensus 569 ~~~~~P~~i~~v~~lP~t~sGKi~r~~l~~~~~ 601 (625)
T TIGR02188 569 GPIAKPDKIRFVPGLPKTRSGKIMRRLLRKIAA 601 (625)
T ss_pred CCCccCcEEEECCCCCCCCCccchHHHHHHHHc
Confidence 666667777778999999999999999988754
No 29
>PRK00174 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.4e-56 Score=613.67 Aligned_cols=511 Identities=20% Similarity=0.252 Sum_probs=390.9
Q ss_pred HHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHH
Q 037878 472 DGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCM 551 (2280)
Q Consensus 472 ~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l 551 (2280)
.+.+++.+++ .|+++|+++.++++...+++||+||+++++++|+.|+++ |+++||+|+++++|++++++++|||+
T Consensus 70 ~~~l~~~~~~--~p~~~Al~~~~~~~~~~~~lTy~eL~~~v~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~~~~~lA~~ 144 (637)
T PRK00174 70 YNCLDRHLKT--RGDKVAIIWEGDDPGDSRKITYRELHREVCRFANALKSL---GVKKGDRVAIYMPMIPEAAVAMLACA 144 (637)
T ss_pred HHHHHHhhcc--CCCCeEEEEECCCCCceEEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHHHH
Confidence 4566666654 489999998765433457899999999999999999998 99999999999999999999999999
Q ss_pred HcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh---------hcc--CCCCCCCccc-ccc------
Q 037878 552 RAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA---------VRV--GSWPNLPWLH-TDS------ 613 (2280)
Q Consensus 552 ~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~---------~~~--~~~~~~~~~~-~~~------ 613 (2280)
++|++++|+++..+.++ +.+++++++++++++++..... +.. ...+....+. ...
T Consensus 145 ~~Gav~v~l~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 217 (637)
T PRK00174 145 RIGAVHSVVFGGFSAEA-------LADRIIDAGAKLVITADEGVRGGKPIPLKANVDEALANCPSVEKVIVVRRTGGDVD 217 (637)
T ss_pred HcCCEEEecCCCCCHHH-------HHHHHHhcCCcEEEEcCccccCCcccchHHHHHHHHHhCCCccEEEEEcCCCCCcC
Confidence 99999999999999888 8899999999999987543210 000 0001110000 000
Q ss_pred c-------cccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCcEEEEEcCc
Q 037878 614 W-------VKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVK-LMRKRYKSTSKTVLVSWLPQ 685 (2280)
Q Consensus 614 ~-------~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~-~~~~~~~~~~~d~~l~~~pl 685 (2280)
+ ...... ............++|++||+|||||||+||||+++|++++.... .....+++.++|++++.+|+
T Consensus 218 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~ 296 (637)
T PRK00174 218 WVEGRDLWWHELVA-GASDECEPEPMDAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAAMTMKYVFDYKDGDVYWCTADV 296 (637)
T ss_pred cCCCCcccHHHHHh-hcCCCCCccccCCCCcEEEEECCCCCCCCceEEeCcchhHHHHHHHHHhccCCCCCcEEEEcCCc
Confidence 0 000000 00011112335678999999999999999999999999865543 34455788899999999999
Q ss_pred hhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEE
Q 037878 686 YHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLM 765 (2280)
Q Consensus 686 ~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~ 765 (2280)
+|.++....++.+|..|+++++++......++..+++.++++++|++.++|++++.+.+..... ....++++||.++
T Consensus 297 ~~~~~~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---~~~~~~~~lr~i~ 373 (637)
T PRK00174 297 GWVTGHSYIVYGPLANGATTLMFEGVPNYPDPGRFWEVIDKHKVTIFYTAPTAIRALMKEGDEH---PKKYDLSSLRLLG 373 (637)
T ss_pred hHhhhhHHHHHHHHHcCCEEEEECCCCCCCChHHHHHHHHhcCCeEEeecHHHHHHHHhcCCcc---cccCCccceeEEE
Confidence 9999987789999999999999865433458999999999999999999999998887643221 1225688999999
Q ss_pred EecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCC
Q 037878 766 VAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPET 845 (2280)
Q Consensus 766 ~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~ 845 (2280)
+|||++++++.+++.+.++ ..++.++|.||+||++..++....... ....+++|+|++|++++|+|+++
T Consensus 374 ~~Ge~l~~~~~~~~~~~~~---~~~~~i~~~YG~TE~~~~~~~~~~~~~--------~~~~~~vG~p~~g~~~~i~d~~g 442 (637)
T PRK00174 374 SVGEPINPEAWEWYYKVVG---GERCPIVDTWWQTETGGIMITPLPGAT--------PLKPGSATRPLPGIQPAVVDEEG 442 (637)
T ss_pred EeCCCCCHHHHHHHHHHhC---CCCCceEecccccccCCceEecCCCCC--------CcCCCcccCCCCCceEEEECCCC
Confidence 9999999999998887753 234789999999999876543221110 11236789999999999999875
Q ss_pred CcccCCCCCeeEEEEcC--CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCee
Q 037878 846 SEEIGEPGKEGEVWISS--PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRN 922 (2280)
Q Consensus 846 ~~~~~p~G~~GEL~i~G--p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~r 922 (2280)
..+|.|+.|||+|+| |++++||||+|+.+.+.|.. ..+|||+|||+|+++ ||.++|+||+||+||++|+|
T Consensus 443 --~~~~~g~~Gel~v~g~~p~~~~gy~~~~~~~~~~~~~-----~~~g~~~TGDl~~~d~dG~l~~~GR~dd~ik~~G~~ 515 (637)
T PRK00174 443 --NPLEGGEGGNLVIKDPWPGMMRTIYGDHERFVKTYFS-----TFKGMYFTGDGARRDEDGYYWITGRVDDVLNVSGHR 515 (637)
T ss_pred --CCCCCCCcEEEEEcCCCCcccccccCCHHHHHHhhhc-----CCCCEEECCceEEEcCCCcEEEEEecccEEEeCCEE
Confidence 345789999999999 69999999999988877642 235799999999997 99999999999999999999
Q ss_pred echHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcce
Q 037878 923 VYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTV 1002 (2280)
Q Consensus 923 I~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~ 1002 (2280)
|+|.|||++|.+||+|.+ |+|++.+++..+ ...++++ ...++...+.++.+.+++.+.++++..+
T Consensus 516 v~p~eIE~~l~~~~~V~~---~~Vvg~~~~~~g---------~~~~a~v---v~~~~~~~~~~~~~~l~~~l~~~l~~~~ 580 (637)
T PRK00174 516 LGTAEIESALVAHPKVAE---AAVVGRPDDIKG---------QGIYAFV---TLKGGEEPSDELRKELRNWVRKEIGPIA 580 (637)
T ss_pred ECHHHHHHHHHhCCCcce---EEEEeeEcCCCC---------eEEEEEE---EECCCCCCCHHHHHHHHHHHHhhcCCcc
Confidence 999999999999999975 889988775432 1122222 2333333334455666666666666556
Q ss_pred eEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 1003 ASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 1003 ~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.|..++.+++||+|+|||++|++|++...
T Consensus 581 ~P~~i~~v~~lP~t~~GKi~R~~L~~~~~ 609 (637)
T PRK00174 581 KPDVIQFAPGLPKTRSGKIMRRILRKIAE 609 (637)
T ss_pred CCCEEEEcCCCCCCCCcchHHHHHHHHHc
Confidence 66667777999999999999999888754
No 30
>PRK11249 katE hydroperoxidase II; Provisional
Probab=100.00 E-value=8.5e-60 Score=603.27 Aligned_cols=298 Identities=20% Similarity=0.300 Sum_probs=271.3
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+|++||.+||||.|++|+|++++++++++++.+|+ +|+++||++|||+++|+++ |+.+|+||||+|||++ +|+
T Consensus 117 EriPER~vHAkG~~a~G~F~~t~~~s~~t~A~~f~~~g~~tPv~~RFStv~G~~gs~Dt~rd~RGfAvKFyt~-eGn--- 192 (752)
T PRK11249 117 ERIPERIVHARGSAAHGYFQPYKSLSDITKAAFLQDPGKITPVFVRFSTVQGPRGSADTVRDIRGFATKFYTE-EGN--- 192 (752)
T ss_pred ccCchhheecccceEEEEEEECccHHHhhhcccccCCCceeeEEEecccCCCCCCCCCcCCCCCceEEEEEcC-CCc---
Confidence 78999999999999999999999999999999995 6999999999999999977 9999999999999998 555
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhcc--------------Cc---chhhhhhhcccCCCccccceeeee
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKR--------------VP---HIRDAVWKSLRLSDSYAEMHYYSN 1849 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~p~s~~~~~y~s~ 1849 (2280)
||||+||.||||++|+++|++|+|+.+++|+..++. +| |....+.+.+++|.||++|+|||+
T Consensus 193 -~Dlvgnn~PvFfi~d~~kFpd~iha~k~~P~~~~~~~~~~~~~~~dF~s~~Pes~h~~~~~~s~r~~P~s~r~~~gfgv 271 (752)
T PRK11249 193 -FDLVGNNTPVFFIQDAIKFPDFVHAVKPEPHNEIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGI 271 (752)
T ss_pred -cceeeecCcceecCCHHHhhHHHhhcCCCCCccCcccCCChHHHHHHHhcChHHHHHHHHHhcCCCCCCCcccCCcccc
Confidence 999999999999999999999999999988775554 22 334444555589999999999999
Q ss_pred eeEEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEE
Q 037878 1850 ICRLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQ 1929 (2280)
Q Consensus 1850 ~~~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ 1929 (2280)
|+|+|+|++|+.+||||||+|.+|+++++++|+.+.... ++||+++||+++|++|++++|+|+||
T Consensus 272 htF~~vna~G~~~~VKfh~kP~~G~~~l~~~Ea~~~~~~---------------dpDflr~DL~eaIe~G~~P~WeL~VQ 336 (752)
T PRK11249 272 HTFRLINAEGKATFVRFHWKPVAGKASLVWDEAQKLTGR---------------DPDFHRRDLWEAIEAGDYPEYELGVQ 336 (752)
T ss_pred cceEEEcCCCCEEEEEEEEEECCccccCCHHHHHHhcCC---------------CccHHHHHHHHHHHcCCCceEEEEEE
Confidence 999999999999999999999999999999988876432 46799999999999999889999999
Q ss_pred EeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchh
Q 037878 1930 IRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRS 2007 (2280)
Q Consensus 1930 ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~ 2007 (2280)
+++++|.++++|+++|+||.|||+++|+++||||+||++++| ++|||++|+|.|+++||++|+ |||||+|.
T Consensus 337 l~~~~d~~~~~f~i~D~TK~WPe~~~P~~~VGkLtLnrn~~n~fae~eqvaF~P~~lvpGI~~S~-------DplLq~R~ 409 (752)
T PRK11249 337 LIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAETEQVAFHPGHIVPGIDFTN-------DPLLQGRL 409 (752)
T ss_pred EcChHHhccCCCCCCcCCccCCcccCcceEeEEEEecCCCCcchhhhheeeccCcCCCCCccCCC-------Cccccccc
Confidence 999999999999999999999999999999999999999999 899999999999999999999 99999999
Q ss_pred hHHHhhhHhhcC-CCCchhHHHhhhcccccccCCCCCc
Q 037878 2008 LIYEICQHLRNG-EPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2008 ~~Y~~s~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
++|.+||++|+| .++ +|++ ||.|.||+
T Consensus 410 fsY~dtq~~Rlgg~N~--------~qlp--vN~p~~~~ 437 (752)
T PRK11249 410 FSYTDTQISRLGGPNF--------HEIP--INRPTCPY 437 (752)
T ss_pred ccchHHhhccCCCCch--------hhcc--cccccCCc
Confidence 999999999998 663 4444 44556655
No 31
>PRK06334 long chain fatty acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=1.8e-56 Score=599.17 Aligned_cols=494 Identities=16% Similarity=0.222 Sum_probs=376.5
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.+.+.+++. |+++|+... +. +++||+||.++++++|+.|.+. +||+|+++++|++++++++
T Consensus 18 ~~~~~~~~~~~~~~~--p~~~a~~~~--~~---~~~Ty~el~~~~~~lA~~L~~~------~gd~Val~~~n~~e~~~~~ 84 (539)
T PRK06334 18 GKTVLESFLKLCSEM--TTATVCWDE--QL---GKLSYNQVRKAVIALATKVSKY------PDQHIGIMMPASAGAYIAY 84 (539)
T ss_pred CCcHHHHHHHHHHhC--CCceEEEeC--CC---CcccHHHHHHHHHHHHHHHhhc------cCCeEEEEcCCchHHHHHH
Confidence 467788888887774 788887532 21 4799999999999999999643 8999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCC--C--CCcccccccc------cc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWP--N--LPWLHTDSWV------KN 617 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~--~--~~~~~~~~~~------~~ 617 (2280)
|||+++|+++||+++..+.++ +.++++++++++++++.+....+...... . ...+..++.. ..
T Consensus 85 lA~~~~G~v~vpl~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 157 (539)
T PRK06334 85 FATLLSGKIPVMINWSQGLRE-------VTACANLVGVTHVLTSKQLMQHLAQTHGEDAEYPFSLIYMEEVRKELSFWEK 157 (539)
T ss_pred HHHHhcCCeeEecCcccchHH-------HHHHHHHcCCCEEEehHHHHHHHhhhhhccccccccEEEEehhhhhccHHHh
Confidence 999999999999999999888 88999999999999986544332211000 0 0011111000 00
Q ss_pred cc-c---ccccc----ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhh
Q 037878 618 SK-N---LLAEN----VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDM 689 (2280)
Q Consensus 618 ~~-~---~~~~~----~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 689 (2280)
.. . ..... ........++|+++|+|||||||.||||++||+++..........++.+++|++++++|++|.+
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~ 237 (539)
T PRK06334 158 CRIGIYMSIPFEWLMRWFGVSDKDPEDVAVILFTSGTEKLPKGVPLTHANLLANQRACLKFFSPKEDDVMMSFLPPFHAY 237 (539)
T ss_pred hhhhhhhcCCchhhhhcccCCCCCcCCEEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCCCceEEEecchHhhh
Confidence 00 0 00000 0011245679999999999999999999999999998888888888899999999999999999
Q ss_pred hHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecC
Q 037878 690 GLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAE 769 (2280)
Q Consensus 690 gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe 769 (2280)
++...++.++..|+++++... . .+|..+++.++++++|++.++|+++..+++..... ..++++||.+++||+
T Consensus 238 g~~~~~~~~l~~G~~vv~~~~-~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-----~~~~~~lr~i~~gG~ 309 (539)
T PRK06334 238 GFNSCTLFPLLSGVPVVFAYN-P--LYPKKIVEMIDEAKVTFLGSTPVFFDYILKTAKKQ-----ESCLPSLRFVVIGGD 309 (539)
T ss_pred hhHHHHHHHHHcCCeEEEecC-C--CCHHHHHHHHHHhCCcEEEecHHHHHHHHHhhhhc-----ccccccccEEEECCc
Confidence 987778899999999887542 2 38999999999999999999999999887654332 246789999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCccc
Q 037878 770 PVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEI 849 (2280)
Q Consensus 770 ~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~ 849 (2280)
++++++.+++.+.+ +++.++|.||+||++.+++...... ....+++|+|++|++++|+|++++. .
T Consensus 310 ~l~~~~~~~~~~~~-----~~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~~vG~p~~g~~v~i~d~~~~~-~ 374 (539)
T PRK06334 310 AFKDSLYQEALKTF-----PHIQLRQGYGTTECSPVITINTVNS---------PKHESCVGMPIRGMDVLIVSEETKV-P 374 (539)
T ss_pred cCCHHHHHHHHHHC-----CCCeEEecccccccCceEEeccCCC---------CCCCCcCceecCCCEEEEEcCCCCc-c
Confidence 99999999998875 4678999999999987766432111 1113568999999999999976554 4
Q ss_pred CCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHH
Q 037878 850 GEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADV 928 (2280)
Q Consensus 850 ~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EI 928 (2280)
+|+|+.|||+|+|++++.||||+|+.++ |.. .++++||+|||+|+++ ||.++|+||+||+||++|+||+|.||
T Consensus 375 ~~~g~~Gel~v~g~~~~~GY~~~~~~~~--~~~----~~~~~w~~TGD~g~~d~~G~l~~~GR~~d~ik~~G~~v~p~eI 448 (539)
T PRK06334 375 VSSGETGLVLTRGTSLFSGYLGEDFGQG--FVE----LGGETWYVTGDLGYVDRHGELFLKGRLSRFVKIGAEMVSLEAL 448 (539)
T ss_pred CCCCceEEEEEecCcccccccCCccccc--cee----eCCceeEECCCEEEECCCCeEEEEeccCCeEEECCEEECHHHH
Confidence 5799999999999999999999998653 321 1356899999999997 99999999999999999999999999
Q ss_pred HHHHHhccCCcCCc---eeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEE
Q 037878 929 EKTVESSTEHIRPG---CCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASV 1005 (2280)
Q Consensus 929 E~~L~~~p~v~~~~---~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~ 1005 (2280)
|++|.+||+|.+.. .++|++++++. ..++++.... ...+++.+.++++....++.|.
T Consensus 449 E~~l~~~~~v~~~~~~~~~~v~~~~~~~--------------~~~~~~~~~~---~~~~~~~~~l~~~~~~~~~~P~--- 508 (539)
T PRK06334 449 ESILMEGFGQNAADHAGPLVVCGLPGEK--------------VRLCLFTTFP---TSISEVNDILKNSKTSSILKIS--- 508 (539)
T ss_pred HHHHHHccCCccccccCceEEEcCCCCc--------------eEEEEEEecc---CChHHHHHHHHhcCCcccccch---
Confidence 99999999997522 26677765421 1222222211 1234555666554222344443
Q ss_pred EEecCCCccCCCCcccchHHHHHHh
Q 037878 1006 KLIKPRTMSKTTSGKIKRFECLKQF 1030 (2280)
Q Consensus 1006 ~lv~~~~lP~t~sGKvdR~~L~~~~ 1030 (2280)
.+..+++||+|+||||||++|++..
T Consensus 509 ~i~~v~~lP~t~~GKi~r~~L~~~~ 533 (539)
T PRK06334 509 YHHQVESIPMLGTGKPDYCSLNALA 533 (539)
T ss_pred heeeecccccccCCcccHHHHHHHH
Confidence 3445599999999999999998764
No 32
>PRK05851 long-chain-fatty-acid--[acyl-carrier-protein] ligase; Validated
Probab=100.00 E-value=7.8e-56 Score=592.62 Aligned_cols=511 Identities=27% Similarity=0.391 Sum_probs=375.6
Q ss_pred HHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHH
Q 037878 471 LDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGC 550 (2280)
Q Consensus 471 l~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~ 550 (2280)
+.+.++.++++. |+++|+.+.+ +..++++||+||.++++++|+.|.++ ++||+|+++++|++++++++|||
T Consensus 4 ~~~~l~~~~~~~--~~~~a~~~~~--~~~~~~~ty~el~~~~~~lA~~L~~~-----~~g~~V~l~~~~~~e~~~~~la~ 74 (525)
T PRK05851 4 LAAALSDAMTAS--GRDLVVLDRE--SGLWRRHPWPEVHGRAENVAARLLDR-----DRPGAVGLVGEPTVELVAAIQGA 74 (525)
T ss_pred HHHHHHHHhcCC--CCceEEeCCC--CCcceeecHHHHHHHHHHHHHHHHhc-----CCCCeEEEEcCCCHHHHHHHHHH
Confidence 677888888774 8899886543 22358999999999999999999764 68999999999999999999999
Q ss_pred HHcCCeEEeCCCCCc-cccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccccccccc
Q 037878 551 MRAKVLPVPVLPPDP-LQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCF 629 (2280)
Q Consensus 551 l~aGa~~vpld~~~p-~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (2280)
+++|++++ +++... .........++..+++++++++++++......+.... ..+ ...++...... ......
T Consensus 75 ~~~G~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~-~~~---~~~~~~~~~~~---~~~~~~ 146 (525)
T PRK05851 75 WLAGAAVS-ILPGPVRGADDGRWADATLTRFAGIGVRTVLSHGSHLERLRAVD-SSV---TVHDLATAAHT---NRSASL 146 (525)
T ss_pred HHcCCCCc-CCCCCCCccchhhHHHHHHHHHHhcCCCEEEeCHHHHHHHHHhh-ccc---ccccccccccc---cccccC
Confidence 99999865 443211 1101112223456788999999999765433222110 011 11111000000 000011
Q ss_pred CCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCC-CCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 630 TESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKST-SKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 630 ~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~-~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
....++|++||+|||||||.||||++||+++.+.+......+++. ++|++++++|++|++++. .++.+++.|+++++.
T Consensus 147 ~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~~~~~~ 225 (525)
T PRK05851 147 TPPDSGGPAVLQGTAGSTGTPRTAILSPGAVLSNLRGLNARVGLDAATDVGCSWLPLYHDMGLA-FLLTAALAGAPLWLA 225 (525)
T ss_pred CCCCCCCeEEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCCCCeEEEcCCCccCccHH-HHHHHHHcCCeEEEc
Confidence 234678999999999999999999999999999999888888888 899999999999999985 678899999999987
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
++..+..+|..+++.++++++|++..+|.++..+.+.... ....++++||.+++||+++++++.++|.+.+..+|+
T Consensus 226 ~~~~~~~~~~~~~~~i~~~~~t~~~~p~~~~~~l~~~~~~----~~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~~~~g~ 301 (525)
T PRK05851 226 PTTAFSASPFRWLSWLSDSRATLTAAPNFAYNLIGKYARR----VSDVDLGALRVALNGGEPVDCDGFERFATAMAPFGF 301 (525)
T ss_pred CHHHHHHCHHHHHHHHHHhCCeEEeCCcHHHHHHHHhhcc----ccCCCHHHhheeEeccccCCHHHHHHHHHHHhhcCC
Confidence 6545555788999999999999987777766655432211 112467899999999999999999999887655666
Q ss_pred CCcccccccCccccccceecccCCC-Cce-ee---cCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCC
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQG-KPI-IL---DWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSP 863 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~-~~~-~~---~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp 863 (2280)
+...++|.||+||++..++...... ... .. +.......+++|+|+||++++|+|+++. ..+|.|+.|||+|+|+
T Consensus 302 ~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~g~~v~i~d~~~~-~~~~~g~~GEl~v~g~ 380 (525)
T PRK05851 302 DAGAAAPSYGLAESTCAVTVPVPGIGLRVDEVTTDDGSGARRHAVLGNPIPGMEVRISPGDGA-AGVAGREIGEIEIRGA 380 (525)
T ss_pred ChhhcccccchhhhceEEEecCCCCCceeeeeccccCcccceeeeecCCCCCcEEEEECCCCC-ccCCCCCeEEEEEecC
Confidence 6667999999999987655432110 000 00 0001123467999999999999998764 3357899999999999
Q ss_pred CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCce
Q 037878 864 SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGC 943 (2280)
Q Consensus 864 ~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~ 943 (2280)
+++.|||++|+.+ .++||+|||+|++++|.|+|+||+||+||++|+||+|.|||++|.+||+|.+
T Consensus 381 ~~~~GY~~~~~~~------------~~~~~~TGDl~~~~~G~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~p~V~~--- 445 (525)
T PRK05851 381 SMMSGYLGQAPID------------PDDWFPTGDLGYLVDGGLVVCGRAKELITVAGRNIFPTEIERVAAQVRGVRE--- 445 (525)
T ss_pred chhhccccCCccC------------CCCceeccceEEEECCEEEEEeecCCEEEECCEEeCHHHHHHHHHhCCCccc---
Confidence 9999999998642 1479999999999999999999999999999999999999999999999976
Q ss_pred eEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhc-CcceeEEEEecCCCccCCCCcccc
Q 037878 944 CAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEH-GVTVASVKLIKPRTMSKTTSGKIK 1022 (2280)
Q Consensus 944 aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~-~~~~~~~~lv~~~~lP~t~sGKvd 1022 (2280)
|+|++++++..+ ....+++..... + ...+++.+.+++++..++ ++|. .+.++..++||+|++||||
T Consensus 446 ~~vv~~~~~~~~----------~~~~~~v~~~~~-~-~~~~~~~~~~~~~l~~~l~~~P~-~~~~v~~~~lP~t~~GKi~ 512 (525)
T PRK05851 446 GAVVAVGTGEGS----------ARPGLVIAAEFR-G-PDEAGARSEVVQRVASECGVVPS-DVVFVAPGSLPRTSSGKLR 512 (525)
T ss_pred ceEEEEEecCCC----------CceeEEEEEEec-C-cchHHHHHHHHHHHHHHhCCCcc-EEEEECCCCcCcCcchHHH
Confidence 788887765322 223333332211 1 123466788888888753 4443 2334333489999999999
Q ss_pred hHHHHHHhhc
Q 037878 1023 RFECLKQFVD 1032 (2280)
Q Consensus 1023 R~~L~~~~~~ 1032 (2280)
|++|++.+.+
T Consensus 513 r~~L~~~~~~ 522 (525)
T PRK05851 513 RLAVKRSLEA 522 (525)
T ss_pred HHHHHHHHHh
Confidence 9999888754
No 33
>PF00199 Catalase: Catalase; InterPro: IPR011614 Catalases (1.11.1.6 from EC) are antioxidant enzymes that catalyse the conversion of hydrogen peroxide to water and molecular oxygen, serving to protect cells from its toxic effects []. Hydrogen peroxide is produced as a consequence of oxidative cellular metabolism and can be converted to the highly reactive hydroxyl radical via transition metals, this radical being able to damage a wide variety of molecules within a cell, leading to oxidative stress and cell death. Catalases act to neutralise hydrogen peroxide toxicity, and are produced by all aerobic organisms ranging from bacteria to man. Most catalases are mono-functional, haem-containing enzymes, although there are also bifunctional haem-containing peroxidase/catalases (IPR000763 from INTERPRO) that are closely related to plant peroxidases, and non-haem, manganese-containing catalases (IPR007760 from INTERPRO) that are found in bacteria []. Based on a phylogenetic analysis, catalases can be classified into clade 1, 2 and 3. Clade 1 contains small subunit catalases from plants and a subset of bacteria; clade 2 contains large subunit catalases from fungi and a second subset of bacteria; and clade 3 contains small subunit catalases from bacteria, fungi, protists, animals, and plants [, ]. This entry represent the core-forming domain of mono-functional, haem-containing catalases. It does not cover the region that carries an immune-responsive amphipathic octa-peptide that is found in the C-terminal of some catalases (IPR010582 from INTERPRO).; GO: 0004096 catalase activity, 0020037 heme binding, 0006979 response to oxidative stress, 0055114 oxidation-reduction process; PDB: 7CAT_A 3NWL_D 4BLC_D 1TH3_D 1TH4_A 1TGU_B 1TH2_D 3RGS_D 3RE8_D 3RGP_C ....
Probab=100.00 E-value=1.1e-58 Score=575.34 Aligned_cols=297 Identities=29% Similarity=0.424 Sum_probs=239.5
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccCC-CceeeEEEEecCCCCCC--CcccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHP-GKCYPVIVRHSNSLSAD--DDARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~-g~~~p~~~RfS~~~~~~--~D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|++ ||+|||++||||++|++ +|+.+|+|||||||+++ +|
T Consensus 40 ~~~~~R~~HAKG~~a~G~F~v~~~~~~~~~a~~F~~~Gk~~pv~vRFS~~~g~~~~~D~~~d~RG~AiKf~~~-eG---- 114 (384)
T PF00199_consen 40 ERPGERAVHAKGHGAKGEFEVTPDLPELTRAGLFAKPGKTYPVIVRFSNAGGNPGSPDTARDPRGMAIKFFTD-EG---- 114 (384)
T ss_dssp --TCS-SSS-SEEEEEEEEEESSCGTTT---GGGSSTT-EEEEEEEEEESSS-TTS-TTSSSBEEEEEEEEET-TE----
T ss_pred ccCccccccccceEEEEEEEECCcchHhhhcccccCCCcccceeeeecccCCCCCCCccCCCcceeEeEEecc-cc----
Confidence 677899999999999999999999999999999966 89999999999999875 49999999999999886 33
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchh----------hhhhccCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAR----------EEHVKRVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~----------~~~~~~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||+|+|+|+||++|+++|++|+++.++++ ..+++.+| +....+.+.+++|.||++++|||+|+|+
T Consensus 115 ~~D~v~~n~PvF~~~d~~~F~~~~~a~~~~p~~~~~~~~~~~~~~~~~pe~~~~~~~~~~~~~~p~s~~~~~y~s~~tf~ 194 (384)
T PF00199_consen 115 NWDFVMNNTPVFFARDPEKFLDFLKALKPDPATGLPDPNRLWAFLAAHPEALHQVAWLFSDRPTPASYAHMNYYSIHTFK 194 (384)
T ss_dssp EEEEEEESSSS-S-SSGGGHHHHHHHHSBBTTTTSBCHHHHHHHHHHSGGGHHHHHHHHSGGGSBSSGGGS-EEEESEEE
T ss_pred cceeeeccccceeccCchhccchhhhhcccccccccChHHHHHHhhcChhhhhhhhhhhccCCCCCCccCCCcEeeeeEE
Confidence 3999999999999999999999999988764 34566777 3344444457899999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||+++|.+|+++++.+|+.+.. .+++|||++||++||+++++++|+|+||++++
T Consensus 195 ~~~~~G~~~~vK~~~~P~~g~~~l~~~ea~~~~---------------~~~pdyL~~dL~~rL~~~~~~~~~l~vQl~~~ 259 (384)
T PF00199_consen 195 FTNADGERRYVKYRLVPEQGVKPLTDEEAAKIA---------------GRDPDYLRDDLYERLAAGGPVRWDLQVQLATP 259 (384)
T ss_dssp EEETTSEEEEEEEEEEETTBTTBE-HHHHHHHH---------------HH-TTHHHHHHHHHHHTTS-EEEEEEEEEEEG
T ss_pred eccccCcccEEEEEecCCCCcccCCHHHhhhcc---------------cCCcchhhHHHHHHHhcCCceeEEEEEEecCc
Confidence 999999999999999999888888877765421 13578999999999997788999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|.++++|+++|+||+|||+++|+++||+|+|++++++ ++||+++|||||+++||+||+ |||+|+|+++|.
T Consensus 260 ~d~~~~~~~i~D~T~~Wpe~~~P~~~vg~L~l~~~~~~~~~~~e~l~F~P~~~~~Gi~~s~-------Dpil~aR~~aY~ 332 (384)
T PF00199_consen 260 EDPMPFRFNIEDATKEWPEDRSPLIPVGTLTLNRNPPDFFAECEQLAFNPWHLPPGIEPSD-------DPILQARSFAYA 332 (384)
T ss_dssp GGCTTSSSHTT-TTS--TTTTSEEEEEEEEEEEEE-SSHHHHTTT----TT--BTTEEE-S--------HHHHHHHHHHH
T ss_pred ccccccCCCcccCCccCCCcCceeeeeeeEeecccccchhhhhhhhhccccccccceecCC-------Ccchhcchhhhh
Confidence 99999999999999999999999999999999998888 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCC
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCP 2043 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 2043 (2280)
+|+++|+|.+ ++|.+|| -|.|+
T Consensus 333 ~s~~~R~~~n--------~~~lp~n--~p~~~ 354 (384)
T PF00199_consen 333 DSQRRRLGAN--------YQQLPVN--EPKCP 354 (384)
T ss_dssp HHHHHHTSTT--------GGGSGGG--S-SSS
T ss_pred hhhhccCCcc--------cccCCCC--CCCCC
Confidence 9999999998 4666666 44444
No 34
>PRK03584 acetoacetyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.1e-55 Score=603.47 Aligned_cols=500 Identities=17% Similarity=0.192 Sum_probs=379.0
Q ss_pred cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCC
Q 037878 484 TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPP 563 (2280)
Q Consensus 484 ~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~ 563 (2280)
.|+++|+++.++++. .+++||+||.++++++|+.|++. |+++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 97 ~~~~~Al~~~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~v~~~lA~~~~Gav~v~l~~~ 172 (655)
T PRK03584 97 RDDRPAIIFRGEDGP-RRELSWAELRRQVAALAAALRAL---GVGPGDRVAAYLPNIPETVVAMLATASLGAIWSSCSPD 172 (655)
T ss_pred CCCCeEEEEECCCCc-eEEEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHHHHHcCcEEEeeCCC
Confidence 479999998876553 47899999999999999999998 99999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHHHHhhcCCeEEEEccccchh---------hcc--CCCCCCC-cccccccc--------------cc
Q 037878 564 DPLQRGGQALLKIENISKSCGAVAILSTIGYHSA---------VRV--GSWPNLP-WLHTDSWV--------------KN 617 (2280)
Q Consensus 564 ~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~---------~~~--~~~~~~~-~~~~~~~~--------------~~ 617 (2280)
++.++ +.+++++++++++++++..... +.. ...+... .+...... ..
T Consensus 173 ~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~ 245 (655)
T PRK03584 173 FGVQG-------VLDRFGQIEPKVLIAVDGYRYGGKAFDRRAKVAELRAALPSLEHVVVVPYLGPAAAAAALPGALLWED 245 (655)
T ss_pred CCHHH-------HHHHHHHcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEecCCCcccccccCCcccHHH
Confidence 99887 8899999999999997643210 000 0011110 00000000 00
Q ss_pred ccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHH-HHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHH
Q 037878 618 SKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLI-HNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLF 696 (2280)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~-~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~ 696 (2280)
................++|++||+|||||||.||||++||++++ +.+......+++.++|+++++.++.|++.. .++
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~--~~~ 323 (655)
T PRK03584 246 FLAPAEAAELEFEPVPFDHPLWILYSSGTTGLPKCIVHGHGGILLEHLKELGLHCDLGPGDRFFWYTTCGWMMWN--WLV 323 (655)
T ss_pred HhhccccCCCCceecCCCCcEEEEecCCCCCCCceEEECccHHHHHHHHHHHHhcCCCCCCEEEEcCCchHHhHH--HHH
Confidence 00000011112234567999999999999999999999999975 446666677889999999999999987643 467
Q ss_pred HHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHH
Q 037878 697 TAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTV 776 (2280)
Q Consensus 697 ~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~ 776 (2280)
.+|+.|++++++++..+..++..++++++++++|++..+|+++..+.+.... .....++++||.+++|||++++++.
T Consensus 324 ~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---~~~~~~l~sLr~i~~~Ge~l~~~~~ 400 (655)
T PRK03584 324 SGLLVGATLVLYDGSPFYPDPNVLWDLAAEEGVTVFGTSAKYLDACEKAGLV---PGETHDLSALRTIGSTGSPLPPEGF 400 (655)
T ss_pred HHHHcCCEEEEeCCCCCCCCHHHHHHHHHHHCCEEEEcCHHHHHHHHhcCCC---ccccCChhheEEEEEecCCCCHHHH
Confidence 8999999999987655456899999999999999999999999887643111 1123678999999999999999999
Q ss_pred HHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCee
Q 037878 777 KRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEG 856 (2280)
Q Consensus 777 ~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~G 856 (2280)
+++.+.+. ++..+.+.||+||++....... ... ....|++|.|.+|++++|+|+++. . + .|+.|
T Consensus 401 ~~~~~~~~----~~~~~~~~yG~TE~~~~~~~~~-~~~--------~~~~g~~g~p~~g~~~~ivd~~g~-~-~-~g~~G 464 (655)
T PRK03584 401 DWVYEHVK----ADVWLASISGGTDICSCFVGGN-PLL--------PVYRGEIQCRGLGMAVEAWDEDGR-P-V-VGEVG 464 (655)
T ss_pred HHHHHHhC----CCceEEeccChHhhhcccccCC-CCC--------CcCCCccCCCcCCceeEEECCCCC-C-C-CCCce
Confidence 99988763 3577999999999864332211 101 122477899999999999998753 3 3 69999
Q ss_pred EEEEcCC--CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHH
Q 037878 857 EVWISSP--SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVE 933 (2280)
Q Consensus 857 EL~i~Gp--~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~ 933 (2280)
||+|+|| +++.||||+|+.++ |...++. ...+||+|||+|+++ ||.++|+||+||+||++|+||+|.|||++|.
T Consensus 465 eL~v~gp~p~~~~gy~~~~~~~~--~~~~~~~-~~~g~~~TGDl~~~d~dG~l~i~GR~dd~Ik~~G~rI~p~EIE~~l~ 541 (655)
T PRK03584 465 ELVCTKPFPSMPLGFWNDPDGSR--YRDAYFD-TFPGVWRHGDWIEITEHGGVVIYGRSDATLNRGGVRIGTAEIYRQVE 541 (655)
T ss_pred EEEEccCCCCCcceeeCCCccch--HHHhhhc-cCCCEeecCCeEEECCCCeEEEEeeccCeeecCcEEECHHHHHHHHH
Confidence 9999996 79999999998653 2221111 124689999999997 9999999999999999999999999999999
Q ss_pred hccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCc
Q 037878 934 SSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTM 1013 (2280)
Q Consensus 934 ~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~l 1013 (2280)
+||+|.+ |+|++++++..+ +.+ +++++..++...++++.+.+++.+..++...+.|..++.+++|
T Consensus 542 ~~p~V~e---a~vvg~~~~~~g----------~~~--~a~vv~~~~~~~~~~~~~~l~~~~~~~L~~~~~P~~i~~v~~l 606 (655)
T PRK03584 542 ALPEVLD---SLVIGQEWPDGD----------VRM--PLFVVLAEGVTLDDALRARIRTTIRTNLSPRHVPDKIIAVPDI 606 (655)
T ss_pred hCCCcce---EEEEeeEcCCCC----------EEE--EEEEEECCCCCCcHHHHHHHHHHHHhhCCCCcCCCEEEECCCC
Confidence 9999975 899998775322 222 2223334444344555667777777666666666677778999
Q ss_pred cCCCCcccchHHHHHHhhcC
Q 037878 1014 SKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1014 P~t~sGKvdR~~L~~~~~~~ 1033 (2280)
|+|+||||+|++|++.+...
T Consensus 607 P~t~sGKi~r~~lr~~~~~~ 626 (655)
T PRK03584 607 PRTLSGKKVELPVKKLLHGR 626 (655)
T ss_pred CCCCCccchHHHHHHHHcCC
Confidence 99999999999999887543
No 35
>PLN02614 long-chain acyl-CoA synthetase
Probab=100.00 E-value=5.6e-56 Score=604.81 Aligned_cols=442 Identities=18% Similarity=0.222 Sum_probs=339.8
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEc---CCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWIN---EEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGL 541 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~---~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~ 541 (2280)
.+...++.+++++++++ +|+++|+.+.+ ++..+++.+||+||+++++++|++|+++ |+++||+|+|+++|++
T Consensus 41 ~~~~~t~~~~l~~~a~~--~pd~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~---Gv~~Gd~Vai~~~n~~ 115 (666)
T PLN02614 41 IEGMDSCWDVFRMSVEK--YPNNPMLGRREIVDGKPGKYVWQTYQEVYDIVIKLGNSLRSV---GVKDEAKCGIYGANSP 115 (666)
T ss_pred CCCCCcHHHHHHHHHHh--CCCCCeEEEecccCCCCCCcEEeEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCH
Confidence 44556899999988877 48999987642 1112235689999999999999999998 9999999999999999
Q ss_pred hHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCC---CCCC-cccccccc--
Q 037878 542 DFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSW---PNLP-WLHTDSWV-- 615 (2280)
Q Consensus 542 e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~---~~~~-~~~~~~~~-- 615 (2280)
||++++|||+++|+++||+++..+.++ +.++++++++++++++.+....+..... +.+. .+..+...
T Consensus 116 e~~~~~lA~~~~Gav~vpl~~~~~~~~-------l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~l~~vi~~~~~~~~ 188 (666)
T PLN02614 116 EWIISMEACNAHGLYCVPLYDTLGAGA-------VEFIISHSEVSIVFVEEKKISELFKTCPNSTEYMKTVVSFGGVSRE 188 (666)
T ss_pred HHHHHHHHHHHcCCEEEEecCCCCHHH-------HHHHHhccCCCEEEECHHHHHHHHHhcccccccceEEEEeCCCChH
Confidence 999999999999999999999999888 8899999999999997654322211000 0000 01000000
Q ss_pred ------------cccccc---ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHc-----CCCC
Q 037878 616 ------------KNSKNL---LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRY-----KSTS 675 (2280)
Q Consensus 616 ------------~~~~~~---~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~-----~~~~ 675 (2280)
...... ............++|+|+|+|||||||.||||++||+|+++.+......+ ++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~I~yTSGTTG~PKGV~lth~nl~~~~~~~~~~~~~~~~~~~~ 268 (666)
T PLN02614 189 QKEEAETFGLVIYAWDEFLKLGEGKQYDLPIKKKSDICTIMYTSGTTGDPKGVMISNESIVTLIAGVIRLLKSANAALTV 268 (666)
T ss_pred HhhhhhhcCcEEEEHHHHHhhcccCCCCCCCCCCCceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhhccccccCCCC
Confidence 000000 00001112234679999999999999999999999999998877665543 5678
Q ss_pred CcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccc----
Q 037878 676 KTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKD---- 751 (2280)
Q Consensus 676 ~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~---- 751 (2280)
+|++++++|++|.+++.. .+.++..|+++++.+ .++..+++.++++++|++.++|.+++.+.+.......
T Consensus 269 ~d~~l~~lPl~H~~~~~~-~~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l~~~~~~~~~~~~~ 342 (666)
T PLN02614 269 KDVYLSYLPLAHIFDRVI-EECFIQHGAAIGFWR-----GDVKLLIEDLGELKPTIFCAVPRVLDRVYSGLQKKLSDGGF 342 (666)
T ss_pred CcEEEEeccHHHHHHHHH-HHHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCeEEEecHHHHHHHHHHHHHHHhccCH
Confidence 999999999999998753 456678899987753 2789999999999999999999999887653321000
Q ss_pred ----------------------cc--cc-----------cCC-CCccEEEEecCCCCHHHHHHHHHHhcCCCCCCccccc
Q 037878 752 ----------------------KV--RS-----------FDL-SSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAP 795 (2280)
Q Consensus 752 ----------------------~~--~~-----------~~l-~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n 795 (2280)
.. .+ ..+ ++||.+++||++++++ +.+|.+.+ .++.++|
T Consensus 343 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~Gga~l~~~-~~~~~~~~-----~~~~i~~ 416 (666)
T PLN02614 343 LKKFVFDSAFSYKFGNMKKGQSHVEASPLCDKLVFNKVKQGLGGNVRIILSGAAPLASH-VESFLRVV-----ACCHVLQ 416 (666)
T ss_pred HHHHHHHHHHHHHHHHHHcCCCCcccchHHHHHHHHHHHHHhCCcEEEEEEcCCCCCHH-HHHHHHHh-----cCCCEEe
Confidence 00 00 012 6899999999999987 56777664 3578999
Q ss_pred ccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEc-CCCCcccCCCCCeeEEEEcCCCcccccCCCch
Q 037878 796 GYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVN-PETSEEIGEPGKEGEVWISSPSAGIGYWGREE 874 (2280)
Q Consensus 796 ~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd-~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~ 874 (2280)
+||+||++..++...... ....+++|+|+||++++|+| ++++...+++|+.|||+|+||+++.|||++|+
T Consensus 417 ~YG~TE~~~~~~~~~~~~---------~~~~gsvG~p~pg~evki~d~~~~~~~~~~~g~~GEl~vrGp~v~~GY~~~pe 487 (666)
T PLN02614 417 GYGLTESCAGTFVSLPDE---------LDMLGTVGPPVPNVDIRLESVPEMEYDALASTPRGEICIRGKTLFSGYYKRED 487 (666)
T ss_pred eCchHhhhhheeeecccc---------CCcCCcccCcCCceEEEEeeecccCcccCCCCCCceEEEcCCcccccccCCHH
Confidence 999999986544322110 11247899999999999998 44433445789999999999999999999999
Q ss_pred hhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCcCCceeEEEecc
Q 037878 875 LSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHIRPGCCAVIGVP 950 (2280)
Q Consensus 875 ~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~ 950 (2280)
.|+++|. +|||||||+|+++ ||+|+|+||+||+||+ +|+||+|.|||++|.+||.|.+ |+|++.+
T Consensus 488 ~T~~~f~--------dGw~~TGDlg~~d~dG~l~i~gR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~---~~V~g~~ 554 (666)
T PLN02614 488 LTKEVLI--------DGWLHTGDVGEWQPNGSMKIIDRKKNIFKLSQGEYVAVENIENIYGEVQAVDS---VWVYGNS 554 (666)
T ss_pred Hhhhhhc--------cCCcccceEEEEcCCCCEEEEEcchhceecCCCeeecHHHHHHHHhcCCCeeE---EEEEecC
Confidence 9999984 3899999999997 9999999999999997 6999999999999999999975 8888854
No 36
>PLN02736 long-chain acyl-CoA synthetase
Probab=100.00 E-value=1.6e-55 Score=603.02 Aligned_cols=512 Identities=18% Similarity=0.235 Sum_probs=377.7
Q ss_pred CCCCCHHHHHHhhccccccCCceEEEEE---cCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHh
Q 037878 466 PELSSLDGYLKHWGTHRITQKKTLFTWI---NEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLD 542 (2280)
Q Consensus 466 ~~~~tl~~~l~~~a~~~~~~d~~A~~~~---~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e 542 (2280)
+...++.+++++.+++. |+++|+.+. ++....++.+||+||.++++++|++|+++ |+++||+|+|+++|++|
T Consensus 41 ~~~~tl~~~l~~~a~~~--p~~~al~~~~~~~~~~~~~~~lTy~el~~~v~~lA~~L~~~---Gv~~gd~Vai~~~n~~e 115 (651)
T PLN02736 41 PEIGTLHDNFVYAVETF--RDYKYLGTRIRVDGTVGEYKWMTYGEAGTARTAIGSGLVQH---GIPKGACVGLYFINRPE 115 (651)
T ss_pred CCCCCHHHHHHHHHHhC--CCCCeEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCCHH
Confidence 44568999999988774 889998542 21112246799999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCccc-ccccc----
Q 037878 543 FVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLH-TDSWV---- 615 (2280)
Q Consensus 543 ~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~-~~~~~---- 615 (2280)
|+++++||+++|+++||+++..+.++ +.++++++++++++++.+....+... ..+.+..+. .+...
T Consensus 116 ~~~~~lA~~~~G~v~vpl~~~~~~~~-------l~~il~~~~~~~l~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~~ 188 (651)
T PLN02736 116 WLIVDHACSAYSYVSVPLYDTLGPDA-------VKFIVNHAEVAAIFCVPQTLNTLLSCLSEIPSVRLIVVVGGADEPLP 188 (651)
T ss_pred HHHHHHHHHHcCCeEEEeecCCCHHH-------HHHHHhccCCCEEEECHHHHHHHHHHhhcCCCceEEEEECCCchhhh
Confidence 99999999999999999999998888 88999999999999986544322110 111111110 00000
Q ss_pred -------------ccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEE
Q 037878 616 -------------KNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSW 682 (2280)
Q Consensus 616 -------------~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~ 682 (2280)
..................++|+|+|+|||||||.||||++||+|+++.+......+++.++|+++++
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IlyTSGTTG~PKGV~lsh~~l~~~~~~~~~~~~~~~~d~~l~~ 268 (651)
T PLN02736 189 SLPSGTGVEIVTYSKLLAQGRSSPQPFRPPKPEDVATICYTSGTTGTPKGVVLTHGNLIANVAGSSLSTKFYPSDVHISY 268 (651)
T ss_pred hhhccCCcEEEEHHHHHHhcccCCCCCCCCCccceEEEEEcCCCCCCCcEEEEecHHHHHHHHHHHhccCCCCCCEEEEe
Confidence 0000000000111234578999999999999999999999999999999888888889999999999
Q ss_pred cCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccc------------
Q 037878 683 LPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSK------------ 750 (2280)
Q Consensus 683 ~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~------------ 750 (2280)
+|++|+++++ .++.++..|+++++.+. ++..+++.++++++|++.++|.+++.+.+......
T Consensus 269 lPl~h~~~~~-~~~~~l~~G~~i~~~~~-----~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~ 342 (651)
T PLN02736 269 LPLAHIYERV-NQIVMLHYGVAVGFYQG-----DNLKLMDDLAALRPTIFCSVPRLYNRIYDGITNAVKESGGLKERLFN 342 (651)
T ss_pred CCHHHHHHHH-HHHHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEecchHHHHHHHHHHHHHHhcccHHHHHHHH
Confidence 9999999986 57778999999887653 67889999999999999999999988765432100
Q ss_pred -------------cccc-----------ccCC-CCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccc
Q 037878 751 -------------DKVR-----------SFDL-SSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVF 805 (2280)
Q Consensus 751 -------------~~~~-----------~~~l-~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~ 805 (2280)
.... ...+ +++|.+++||+++++++.+++.+.+ ++.++++||+||++..
T Consensus 343 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~~~~gGa~l~~~~~~~~~~~~------g~~~~~~YG~TE~~~~ 416 (651)
T PLN02736 343 AAYNAKKQALENGKNPSPMWDRLVFNKIKAKLGGRVRFMSSGASPLSPDVMEFLRICF------GGRVLEGYGMTETSCV 416 (651)
T ss_pred HHHHHHHHHHHcCCCCCchHHHHHHHHHHHHhcCcEEEEEeCCCCCCHHHHHHHHHHh------CCCeEEEechHHhchh
Confidence 0000 0012 4899999999999999999988764 4679999999999876
Q ss_pred eecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCc--ccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhh
Q 037878 806 VSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSE--EIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNE 883 (2280)
Q Consensus 806 ~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~--~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~ 883 (2280)
++..... ....+++|+|+||++++|+|.+++. ....+++.|||+|+||+++.|||++|+.|+++|..
T Consensus 417 ~~~~~~~----------~~~~~~vG~p~pg~~v~i~d~~~~~~~~~~~~~~~GEl~vrgp~v~~GY~~~~~~t~~~~~~- 485 (651)
T PLN02736 417 ISGMDEG----------DNLSGHVGSPNPACEVKLVDVPEMNYTSEDQPYPRGEICVRGPIIFKGYYKDEVQTREVIDE- 485 (651)
T ss_pred eeccCCC----------CCCCCccCCccCceEEEEEEccccCcccCCCCCCCceEEecCCccccccccCHHHHHhhhcc-
Confidence 5543211 1234789999999999999943221 11134567999999999999999999999999853
Q ss_pred ccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccc
Q 037878 884 LQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISV 961 (2280)
Q Consensus 884 ~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~ 961 (2280)
+|||||||+|+++ ||.|+|+||+||+||+ +|+||+|.|||++|.+||.|.+ |+|++.. .+
T Consensus 486 ------dgw~~TGDlg~~d~dG~l~i~GR~kd~ik~~~G~~V~p~eIE~~l~~~p~V~~---a~V~g~~---~~------ 547 (651)
T PLN02736 486 ------DGWLHTGDIGLWLPGGRLKIIDRKKNIFKLAQGEYIAPEKIENVYAKCKFVAQ---CFVYGDS---LN------ 547 (651)
T ss_pred ------CCCeeccceEEEcCCCcEEEEEechhheEcCCCcEechHHHHHHHhcCCCeeE---EEEEecC---CC------
Confidence 4899999999997 9999999999999998 6999999999999999999975 7888721 11
Q ss_pred cCCCCceEEEEEEEec--------CCCC-C-------CHHHHHHHHHHHHH-----hcCcceeEEEEecCCCcc------
Q 037878 962 SDGSDQVGLVVIAEVR--------DGKP-V-------DKDVIENIKTRVVE-----EHGVTVASVKLIKPRTMS------ 1014 (2280)
Q Consensus 962 ~~~~~~~~~vv~~~~~--------~~~~-~-------~~~l~~~l~~~l~~-----~~~~~~~~~~lv~~~~lP------ 1014 (2280)
....++++. ... .+.. . ..++.+.+.+.+.. .+.....+..+...++.|
T Consensus 548 ---~~~~A~vv~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~ 623 (651)
T PLN02736 548 ---SSLVAVVVV-DPEVLKAWAASEGIKYEDLKQLCNDPRVRAAVLADMDAVGREAQLRGFEFAKAVTLVPEPFTVENGL 623 (651)
T ss_pred ---ceeEEEEEe-CHHHHHHHHHHcCCCccCHHHHhcCHHHHHHHHHHHHHHHHhcCCCcceeeeEEEEeCCCCcCCCCc
Confidence 123333332 211 0111 0 11222333332222 233334444455556665
Q ss_pred CCCCcccchHHHHHHhhcCC
Q 037878 1015 KTTSGKIKRFECLKQFVDGT 1034 (2280)
Q Consensus 1015 ~t~sGKvdR~~L~~~~~~~~ 1034 (2280)
+|++||++|+++++.|.+..
T Consensus 624 lT~~~Ki~R~~i~~~~~~~i 643 (651)
T PLN02736 624 LTPTFKVKRPQAKAYFAKAI 643 (651)
T ss_pred CChhhhhhHHHHHHHHHHHH
Confidence 79999999999999986643
No 37
>PRK07529 AMP-binding domain protein; Validated
Probab=100.00 E-value=2.9e-55 Score=597.84 Aligned_cols=505 Identities=22% Similarity=0.300 Sum_probs=388.7
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCC--ceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEG--VAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g--~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
.++.+++++.+++. |+++|+.+....+ ...+++||+||.++++++|+.|++. |+++||+|+++++|+++++++
T Consensus 25 ~t~~~~l~~~a~~~--p~~~Al~~~~~~~~~~~~~~~Ty~eL~~~v~~~A~~L~~~---Gi~~gd~V~i~~~n~~e~~~~ 99 (632)
T PRK07529 25 ASTYELLSRAAARH--PDAPALSFLLDADPLDRPETWTYAELLADVTRTANLLHSL---GVGPGDVVAFLLPNLPETHFA 99 (632)
T ss_pred CCHHHHHHHHHHHC--CCCceEEeecccCCCCCCceeEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHH
Confidence 47889999888774 8999998753221 1236899999999999999999998 999999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch-----hhc--cCCCCCCCcc-ccc------
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS-----AVR--VGSWPNLPWL-HTD------ 612 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~-----~~~--~~~~~~~~~~-~~~------ 612 (2280)
+|||+++| +++|+++..+.++ +.++++++++++++++..... .+. ....+....+ ..+
T Consensus 100 ~lA~~~~G-i~~pi~~~~~~~~-------i~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~ 171 (632)
T PRK07529 100 LWGGEAAG-IANPINPLLEPEQ-------IAELLRAAGAKVLVTLGPFPGTDIWQKVAEVLAALPELRTVVEVDLARYLP 171 (632)
T ss_pred HHHHHHhC-EEEeCCCcCCHHH-------HHHHHHhcCCcEEEEeCCCCCchHHHHHHHHHhcCCcceeEEEecCccccc
Confidence 99999999 5699999999888 889999999999999754321 000 0001111100 000
Q ss_pred -------------------cccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCC
Q 037878 613 -------------------SWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKS 673 (2280)
Q Consensus 613 -------------------~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~ 673 (2280)
++...................++++++|+|||||||.||||++||+++++........+++
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~i~~TSGTTG~PK~v~~sh~~l~~~~~~~~~~~~~ 251 (632)
T PRK07529 172 GPKRLAVPLIRRKAHARILDFDAELARQPGDRLFSGRPIGPDDVAAYFHTGGTTGMPKLAQHTHGNEVANAWLGALLLGL 251 (632)
T ss_pred ccccccccccccccccccCCHHHHHhcCCCccccccCCCCcCceEEEEECCCccCcCCEEEEcHHHHHHHHHHHHHhcCC
Confidence 0000000000000011123467999999999999999999999999999988888888888
Q ss_pred CCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCH---HHHHHHHhhcceeeecCcHHHHHHHHHHHhccc
Q 037878 674 TSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNP---LLWLETMSKYRATHSAGPNFAFELMVRRLESSK 750 (2280)
Q Consensus 674 ~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p---~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~ 750 (2280)
.+++++++.+|++|.++++..++.++..|+++++.++..+. ++ ..+++.++++++|++.++|+++..+.+...
T Consensus 252 ~~~d~~l~~~pl~h~~~~~~~~~~~l~~G~~vv~~~~~~~~-~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--- 327 (632)
T PRK07529 252 GPGDTVFCGLPLFHVNALLVTGLAPLARGAHVVLATPQGYR-GPGVIANFWKIVERYRINFLSGVPTVYAALLQVPV--- 327 (632)
T ss_pred CCCCEEEEecCchhhhHHHHHHHHHHHCCCEEEecCccccC-cchHHHHHHHHHHHhCCeEEEeHHHHHHHHHhCcc---
Confidence 99999999999999999988899999999999997654432 32 578899999999999999999988875421
Q ss_pred ccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeecccc
Q 037878 751 DKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVD 830 (2280)
Q Consensus 751 ~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG 830 (2280)
...++++||.+++||+++++++.++|.+.+ +++++|.||+||++.+++..... +....+++|
T Consensus 328 ---~~~~~~slr~v~~gg~~l~~~l~~~~~~~~------g~~l~~~YG~TE~~~~~~~~~~~---------~~~~~~svG 389 (632)
T PRK07529 328 ---DGHDISSLRYALCGAAPLPVEVFRRFEAAT------GVRIVEGYGLTEATCVSSVNPPD---------GERRIGSVG 389 (632)
T ss_pred ---cCCCccceEEEEEcCCCCCHHHHHHHHHHh------CCcEeeeecccccCcccccCCcc---------ccccCCCcc
Confidence 124688999999999999999999998864 56899999999998766543221 122357899
Q ss_pred CCCCCceEEEE--cCCCC-cccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeE
Q 037878 831 QNDPDVDIRIV--NPETS-EEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKF 906 (2280)
Q Consensus 831 ~p~pg~~v~Iv--d~~~~-~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l 906 (2280)
.|+|+++++|+ |+++. ...++.|+.|||+|+||+++.||++++ .+.+.|. +++||+|||+|+++ ||.+
T Consensus 390 ~~~p~~~v~i~~~d~~g~~~~~~~~g~~Gel~v~gp~v~~GY~~~~-~~~~~~~-------~~gw~~TGDlg~~d~dG~l 461 (632)
T PRK07529 390 LRLPYQRVRVVILDDAGRYLRDCAVDEVGVLCIAGPNVFSGYLEAA-HNKGLWL-------EDGWLNTGDLGRIDADGYF 461 (632)
T ss_pred cccCCceEEEEEcCCCCcccccCCCCCceEEEEECCCccccccCCc-ccccccc-------CCCceEcCcEEEEcCCceE
Confidence 99999999986 55432 145579999999999999999999765 4555553 25899999999997 9999
Q ss_pred EEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHH
Q 037878 907 FITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKD 985 (2280)
Q Consensus 907 ~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~ 985 (2280)
+|.||+||+||++|+||+|.|||++|.+||+|.+ |+|++.+++..++ ..+++++ ..++.. ..++
T Consensus 462 ~i~GR~~d~i~~~G~~i~p~eIE~~l~~~p~V~~---a~vvg~~d~~~ge---------~~~a~v~---l~~~~~~~~~~ 526 (632)
T PRK07529 462 WLTGRAKDLIIRGGHNIDPAAIEEALLRHPAVAL---AAAVGRPDAHAGE---------LPVAYVQ---LKPGASATEAE 526 (632)
T ss_pred EEEecccCEEEeCCEEECHHHHHHHHHhCCCeeE---EEEEeccCCCCCc---------eeEEEEE---EcCCCCCCHHH
Confidence 9999999999999999999999999999999975 8899888764321 1222332 233332 3367
Q ss_pred HHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCC
Q 037878 986 VIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGT 1034 (2280)
Q Consensus 986 l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~ 1034 (2280)
+.+++++++.+.+++|.. ++.+++||+|++|||+|++|++.+.+..
T Consensus 527 l~~~~~~~l~~~~~~P~~---i~~v~~lP~t~~GKi~r~~Lr~~~~~~~ 572 (632)
T PRK07529 527 LLAFARDHIAERAAVPKH---VRILDALPKTAVGKIFKPALRRDAIRRV 572 (632)
T ss_pred HHHHHHHhcchhccCCcE---EEEecCCCCCCCCcccHHHHHHHHHHHH
Confidence 788888888765665543 3444899999999999999999876543
No 38
>PRK10524 prpE propionyl-CoA synthetase; Provisional
Probab=100.00 E-value=5.4e-55 Score=597.70 Aligned_cols=514 Identities=19% Similarity=0.231 Sum_probs=386.4
Q ss_pred HHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHH
Q 037878 471 LDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGC 550 (2280)
Q Consensus 471 l~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~ 550 (2280)
..+++++.++. .|+++|+++.+++....+.+||+||.++++++|+.|+++ |+++||+|+++++|++++++++|||
T Consensus 55 ~~~~l~~~~~~--~p~~~A~~~~~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~~~~~lA~ 129 (629)
T PRK10524 55 CHNAVDRHLAK--RPEQLALIAVSTETDEERTYTFRQLHDEVNRMAAMLRSL---GVQRGDRVLIYMPMIAEAAFAMLAC 129 (629)
T ss_pred HHHHHHHhhcc--CCCCeEEEEEcCCCCceEEEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHHH
Confidence 35667666654 489999988653322347899999999999999999998 9999999999999999999999999
Q ss_pred HHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch---------hh----ccCCCCCCCccccccccc-
Q 037878 551 MRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS---------AV----RVGSWPNLPWLHTDSWVK- 616 (2280)
Q Consensus 551 l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~---------~~----~~~~~~~~~~~~~~~~~~- 616 (2280)
+++|++++|+++.++.++ +..++++++++++++++.... .+ ..........+..+....
T Consensus 130 ~~~Gav~v~~~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~~~ 202 (629)
T PRK10524 130 ARIGAIHSVVFGGFASHS-------LAARIDDAKPVLIVSADAGSRGGKVVPYKPLLDEAIALAQHKPRHVLLVDRGLAP 202 (629)
T ss_pred HHhCcEEEeeCCCCCHHH-------HHHHHHhcCCcEEEEccCcccCCcccccHHHHHHHHHhcCCCCCEEEEEeCCCCC
Confidence 999999999999999888 889999999999998653210 00 000000000111000000
Q ss_pred ---------cccccc---cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHH-HHHHHHHcCCCCCcEEEEEc
Q 037878 617 ---------NSKNLL---AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHN-VKLMRKRYKSTSKTVLVSWL 683 (2280)
Q Consensus 617 ---------~~~~~~---~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~-~~~~~~~~~~~~~d~~l~~~ 683 (2280)
...... .....+.....++|++||+|||||||.||||+++|++++.. .......+++.++|++++.+
T Consensus 203 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~il~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~ 282 (629)
T PRK10524 203 MARVAGRDVDYATLRAQHLGARVPVEWLESNEPSYILYTSGTTGKPKGVQRDTGGYAVALATSMDTIFGGKAGETFFCAS 282 (629)
T ss_pred cCcccCCcccHHHHHhcCCCCCCCceeeCCCCceEEEeecCCCCCCceEEECCcHHHHHHHHHHHHhcCCCCCCEEEEcC
Confidence 000000 00011112246789999999999999999999999997544 34445567888999999999
Q ss_pred CchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccE
Q 037878 684 PQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKF 763 (2280)
Q Consensus 684 pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~ 763 (2280)
|++|+++....++.+++.|+++++++......++..+++.++++++|++.++|++++.+.+.... .....++++||.
T Consensus 283 ~~~~~~~~~~~~~~~l~~G~~~v~~~g~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~---~~~~~~l~~lr~ 359 (629)
T PRK10524 283 DIGWVVGHSYIVYAPLLAGMATIMYEGLPTRPDAGIWWRIVEKYKVNRMFSAPTAIRVLKKQDPA---LLRKHDLSSLRA 359 (629)
T ss_pred CCCeeccchHHHHHHHhCCCEEEEECCCCCCCChHHHHHHHHHcCceEEEeCHHHHHHHHhcCcc---cccccChhheeE
Confidence 99999887778899999999999987654456899999999999999999999999887653211 112356889999
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcC
Q 037878 764 LMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNP 843 (2280)
Q Consensus 764 l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~ 843 (2280)
+++|||++++++.+++.+.+ ++.++|.||+||++..++........ .....+++|+|+||++++|+|+
T Consensus 360 i~~~Ge~l~~~~~~~~~~~~------~~~v~~~YG~TE~~~~~~~~~~~~~~------~~~~~~~~G~p~~g~~~~i~d~ 427 (629)
T PRK10524 360 LFLAGEPLDEPTASWISEAL------GVPVIDNYWQTETGWPILAIARGVED------RPTRLGSPGVPMYGYNVKLLNE 427 (629)
T ss_pred EEEeCCCCCHHHHHHHHHhc------CCCeEeccccccccchhhcCCCCccc------CcCCCCCcccCcCCceEEEEeC
Confidence 99999999999998888764 46799999999998433221111000 0122478999999999999998
Q ss_pred CCCcccCCCCCeeEEEEcCC---CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEEC
Q 037878 844 ETSEEIGEPGKEGEVWISSP---SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVA 919 (2280)
Q Consensus 844 ~~~~~~~p~G~~GEL~i~Gp---~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~ 919 (2280)
+.+. .++.|+.|||+|+|| +++.|||++++.+.+.|... .+++||+|||+|+++ ||.++|+||+||+||++
T Consensus 428 ~~g~-~~~~g~~Gel~i~gp~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~TGDl~~~d~dG~l~i~GR~dd~i~~~ 502 (629)
T PRK10524 428 VTGE-PCGPNEKGVLVIEGPLPPGCMQTVWGDDDRFVKTYWSL----FGRQVYSTFDWGIRDADGYYFILGRTDDVINVA 502 (629)
T ss_pred CCCC-CCCCCCcEEEEEcCCCChhhcCCccCChHHHHHhhhcc----CCCcEEEcCCcEEEcCCCcEEEEEEecCeEEeC
Confidence 4343 457999999999998 67899999998777665432 245899999999997 99999999999999999
Q ss_pred CeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-----CCHHHHHHHHHHH
Q 037878 920 GRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-----VDKDVIENIKTRV 994 (2280)
Q Consensus 920 G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-----~~~~l~~~l~~~l 994 (2280)
|+||+|.|||++|.+||+|.+ |+|++++++..++ ..+++++. .++.. ...++.+.+++.+
T Consensus 503 G~ri~p~eIE~~l~~~p~V~e---~~vvg~~d~~~g~---------~~~~~vv~---~~~~~~~~~~~~~~~~~~i~~~~ 567 (629)
T PRK10524 503 GHRLGTREIEESISSHPAVAE---VAVVGVKDALKGQ---------VAVAFVVP---KDSDSLADREARLALEKEIMALV 567 (629)
T ss_pred CEEeCHHHHHHHHHhCCCcce---EEEEccccCCCCe---------EEEEEEEE---CCCCccccccchHHHHHHHHHHH
Confidence 999999999999999999975 8999988764321 12222222 22211 1234566677777
Q ss_pred HHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 995 VEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 995 ~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.+.++..+.|..++.+++||+|+|||++|++|++.+.
T Consensus 568 ~~~l~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~ 604 (629)
T PRK10524 568 DSQLGAVARPARVWFVSALPKTRSGKLLRRAIQAIAE 604 (629)
T ss_pred HhhcCCCcCCCEEEEcCCCCCCCCcchHHHHHHHHHc
Confidence 7766666666777778999999999999999988754
No 39
>cd08151 AOS Allene oxide synthase. Allene oxide synthase converts a fatty acid hydroperoxide to an allene oxide, which is an unstable epoxide. In corals, the enzyme is part of a eiconaosid synthesis pathway that is initiated by a lipoxygenase, which generates the fatty acid hydroperoxides in the first step. The structure of allene oxide synthase closely resembles that of catalase, but allene oxide synthase does not have catalase activity.
Probab=100.00 E-value=1.8e-57 Score=552.38 Aligned_cols=321 Identities=41% Similarity=0.672 Sum_probs=276.6
Q ss_pred hHHHHHHHHHhhhhhhhhhhheecccccccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCCcccccc
Q 037878 1690 MDMKYKKIVGNLSANLAATTLKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADDDARIDA 1769 (2280)
Q Consensus 1690 ~~p~~~~~v~~l~~~~~~~~~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~D~~~~~ 1769 (2280)
.+..+++++.+++..|++.+...+.|.+||||+|++|+|+|++|++ ++++++|++|++|||++||||++|+.+|+.+|+
T Consensus 3 ~~~~~~~~~~~~~~~f~~~~~~~g~R~~HaKG~ga~G~F~v~~d~~-~~~a~~F~~g~~~pv~~RfS~~~g~~~D~~~d~ 81 (328)
T cd08151 3 LDSELKKIELNLATMFAAATLKTGRRGTHTIGVGAKGVLTVLAESD-FPEHAFFTAGKRFPVILRHANIVGGDDDASLDG 81 (328)
T ss_pred chHHHHHHHHHHHHHHhhccCCCCcccccCceeeEEEEEEEcCCch-hhhhhhcCCCCeEEEEEEecCCCCCccccccCC
Confidence 4567899999999999999999999999999999999999999999 999999999999999999999999866999999
Q ss_pred cccEEEeeccCCCCCCcceeeecccccccccCChhhHHHHHhhccchhhh-hhccCcchhhhhhhcc-cCCCccccceee
Q 037878 1770 RGAAIRIFSDLNGNTSSLLDLTLKTGNAFYARTIGDFATWLVCGLAAREE-HVKRVPHIRDAVWKSL-RLSDSYAEMHYY 1847 (2280)
Q Consensus 1770 rG~Aik~~~~~~~~~~~~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~-~~p~s~~~~~y~ 1847 (2280)
|||||||+++. +.++++|||+|||+|+||++|+++|++|+++..+.+.. +...+|......+... +.|.||++++||
T Consensus 82 RG~AiKf~~~~-~~~~~~~D~v~~n~pvF~~~d~~~F~~~~~a~~p~~~~~~~~~~p~~~~~~~~~~~~~p~s~~~~~y~ 160 (328)
T cd08151 82 RGAALRFLNAG-DDDAGPLDLVMNTGESFGFWTAASFADFAGAGLPFREKAAKLRGPLARYAVWASLRRAPDSYTDLHYY 160 (328)
T ss_pred CeEEEEEeccC-CCCCCceeEEEecCCccccCCHHHHHHHHhcCCCcchhhhhhcCHHHHhhhhhcccCCCCCcccccce
Confidence 99999999863 24578899999999999999999999999986665533 3345665554455444 789999999999
Q ss_pred eeeeEEEEEeCCcEEEEEEEeecC-CCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEE
Q 037878 1848 SNICRLFRFTDGQEMYVKFKLRPY-DESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIF 1926 (2280)
Q Consensus 1848 s~~~~~~~~~~g~~~~vk~~~~P~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l 1926 (2280)
|+|||+|+|++|+.+||||+++|. ++..++..+++.+. ........+++.+.+++++|||++||++||++| +++|+|
T Consensus 161 s~~~f~f~~~~G~~~~vK~~~~P~~~~~~~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~d~L~~dl~~rl~~g-~~~~~l 238 (328)
T cd08151 161 SQICYEFVALDGKSRYARFRLLPPDADTEWDLGEDVLET-IFQRPRLYLPRLPGDTRPKDYLRNEFRQRLQSP-GVRYRL 238 (328)
T ss_pred eEeeEEEECCCCCEEEEEEEEEECCCCccccchhhhhhc-ccccccccchhhcccCCCccHHHHHHHHHHHhC-CceEEE
Confidence 999999999999999999999995 45566666554422 111222445555667789999999999999997 799999
Q ss_pred EEEEeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCChhhhccccccCCcCCC--ccccccCCCccccccccc
Q 037878 1927 QLQIRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLSTEESEKLEFNPYLKCN--EIDVIPATTSSQSASIDH 2004 (2280)
Q Consensus 1927 ~vQ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~~~~e~l~F~P~~~~~--g~~~~~~~~~~~~d~i~~ 2004 (2280)
+||+++++|.. +++++|+||+|||+++|+++||+|+|++++++++||+++|||||+++ ||+++. +.+||.+|++
T Consensus 239 ~iQl~~~~d~~--~~~i~D~T~~Wpe~~~P~i~vg~l~l~~~~~~~~~e~l~F~P~~~~~~~gi~~~~--~~~d~gsi~~ 314 (328)
T cd08151 239 QIQLREVSDDA--TAVALDCCRPWDEDEHPWLDLAVVRLGAPLPNDELEKLAFNPGNTPESLGLPLAY--CADDYASLGH 314 (328)
T ss_pred EEEEechhhcC--CCCCCCCCccCCcccCceEEEEEEEECCCCChhhhHhhcccccccCCCCCccCCC--ChHHhhhHHH
Confidence 99999998755 66788999999999999999999999999888999999999999999 998888 4456777999
Q ss_pred chhhHHHhhhHhhc
Q 037878 2005 GRSLIYEICQHLRN 2018 (2280)
Q Consensus 2005 ~R~~~Y~~s~~~R~ 2018 (2280)
+|+.||+.|+++|.
T Consensus 315 ~R~~vY~~s~~~R~ 328 (328)
T cd08151 315 LRSLVYEISQRLRK 328 (328)
T ss_pred HHHHHHHHHHhhcC
Confidence 99999999999994
No 40
>TIGR01217 ac_ac_CoA_syn acetoacetyl-CoA synthase. This enzyme catalyzes the first step of the mevalonate pathway of IPP biosynthesis. Most bacteria do not use this pathway, but rather the deoxyxylulose pathway.
Probab=100.00 E-value=5e-55 Score=596.29 Aligned_cols=495 Identities=17% Similarity=0.194 Sum_probs=372.3
Q ss_pred CCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCC
Q 037878 485 QKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPD 564 (2280)
Q Consensus 485 ~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~ 564 (2280)
++++|+++.++++. .+++||+||.++++++|+.|+++ |+++||+|+++++|++++++++|||+++|++++|+++.+
T Consensus 98 ~~~~a~~~~~~~~~-~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~GdrV~i~~~n~~e~~~~~lA~~~~Gav~vp~~~~~ 173 (652)
T TIGR01217 98 GTEPALLYVDETHE-PAPVTWAELRRQVASLAAALRAL---GVRPGDRVSGYLPNIPQAVVAMLATASVGAIWSSCSPDF 173 (652)
T ss_pred CCCeEEEEECCCCC-eeEEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHHHHHhCeEEEecCCCC
Confidence 57889988876553 37899999999999999999998 999999999999999999999999999999999999999
Q ss_pred ccccchhhHHHHHHHHhhcCCeEEEEccccc---------hhhcc--CCCCCCC-cccccc-------------c--ccc
Q 037878 565 PLQRGGQALLKIENISKSCGAVAILSTIGYH---------SAVRV--GSWPNLP-WLHTDS-------------W--VKN 617 (2280)
Q Consensus 565 p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~---------~~~~~--~~~~~~~-~~~~~~-------------~--~~~ 617 (2280)
+.++ +.+++++++++++|+++... ..+.. ...+.+. .+.... . ...
T Consensus 174 ~~~~-------l~~~l~~~~~k~li~~~~~~~~~k~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~ 246 (652)
T TIGR01217 174 GARG-------VLDRFQQIEPKLLFTVDGYRYNGKEHDRRDKVAEVRKELPTLRAVVHIPYLGPRETEAPKIDGALDLED 246 (652)
T ss_pred CHHH-------HHHHHHhcCCcEEEEccccccCCcccchHHHHHHHHhcCCCccEEEEEeCCCCcccccccccCcccHHH
Confidence 9887 88999999999999876431 00000 0011111 000000 0 000
Q ss_pred ccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHH-HHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHH
Q 037878 618 SKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLI-HNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLF 696 (2280)
Q Consensus 618 ~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~-~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~ 696 (2280)
................++|+++|+|||||||.||||+++|++++ +........+++.++|++++++|++|++. ..++
T Consensus 247 ~~~~~~~~~~~~~~~~~~d~~~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~--~~~~ 324 (652)
T TIGR01217 247 FTAAAQAAELVFEQLPFDHPLWILFSSGTTGLPKCIVHSAGGTLVQHLKEHGLHCDLGPGDRLFYYTTTGWMMW--NWLV 324 (652)
T ss_pred HHhcccCCCCCceecCCCCCEEEEEcCCCCCCCCeEEecccHHHHHHHHHHHhccCCCCCcEEEEeCCcchhhh--HHHH
Confidence 00000001111223456899999999999999999999999965 44555566688899999999999999864 3356
Q ss_pred HHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHH
Q 037878 697 TAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTV 776 (2280)
Q Consensus 697 ~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~ 776 (2280)
.+|+.|++++++++..+..++..++++++++++|++..+|.++..+...... .....++++||.+++|||++++++.
T Consensus 325 ~~l~~G~t~vl~~g~~~~~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~~---~~~~~~l~sLr~i~~gGe~l~~~~~ 401 (652)
T TIGR01217 325 SGLATGATLVLYDGSPGFPATNVLWDIAERTGATLFGTSAKYVMACRKAGVH---PARTHDLSALQCVASTGSPLPPDGF 401 (652)
T ss_pred HHHhcCcEEEEECCCCCCCCchHHHHHHHHhCCeEEecCHHHHHHHHhcCCC---ccccCChhheeEEEeecCCCCHHHH
Confidence 8999999999987554445889999999999999998888877665432111 1123678999999999999999999
Q ss_pred HHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCee
Q 037878 777 KRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEG 856 (2280)
Q Consensus 777 ~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~G 856 (2280)
+++.+.+. ++..+.+.||+||++...... .... ....|++|.|.+|++++|+|+++. ++ +|+.|
T Consensus 402 ~~~~~~~~----~~~~~~~~yG~TE~~~~~~~~-~~~~--------~~~~g~~g~p~~g~~v~ivd~~g~-~~--~g~~G 465 (652)
T TIGR01217 402 RWVYDEIK----ADVWLASISGGTDICSCFAGA-NPTL--------PVHIGEIQAPGLGTAVQSWDPEGK-PV--TGEVG 465 (652)
T ss_pred HHHHHHhC----CCceEEeccCHHHHhccccCC-CCCC--------CCcCCccCCCcCCCceEEECCCCC-CC--CCCcc
Confidence 99988763 245678999999975332211 1111 123477899999999999998763 33 59999
Q ss_pred EEEEcCC--CcccccCCCchhhH--HHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 857 EVWISSP--SAGIGYWGREELSQ--ITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 857 EL~i~Gp--~v~~GY~~~p~~t~--~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
||+|+|| +++.||||||+.|+ +.+.. ..++||+|||+|+++ ||+++|+||+||+||++|+||+|.|||++
T Consensus 466 El~v~gp~p~~~~gy~~~~~~t~~~~~~~~-----~~~g~~~tGDlg~~d~dG~l~i~GR~dd~I~~~G~ri~p~EIE~~ 540 (652)
T TIGR01217 466 ELVCTNPMPSMPIRFWNDPDGSKYRDAYFD-----TYPGVWRHGDWITLTPRGGIVIHGRSDSTLNPQGVRMGSAEIYNA 540 (652)
T ss_pred EEEEecCCCccccceeCCCccchhHHhhhc-----CCCCEEEcCCcEEECCCCcEEEEecccCeEecCCEEcCHHHHHHH
Confidence 9999996 68999999998664 23321 124799999999997 99999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCC
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPR 1011 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~ 1011 (2280)
|.+||+|.+ |+|++++++..+ +.+.++ +...++...++++.+.+++.+.+++...+.|..++.++
T Consensus 541 l~~~p~V~e---aavvg~~~~~~g----------e~~~af--Vv~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~ 605 (652)
T TIGR01217 541 VERLDEVRE---SLCIGQEQPDGG----------YRVVLF--VHLAPGATLDDALLDRIKRTIRAGLSPRHVPDEIIEVP 605 (652)
T ss_pred HHhCCCcce---EEEEeeecCCCC----------EEEEEE--EEECCCCCCCHHHHHHHHHHHHhhCCCCcCCCEEEECC
Confidence 999999976 899998876432 222222 23344444445556667777766665556666677779
Q ss_pred CccCCCCcccchHHHHHHhh
Q 037878 1012 TMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 1012 ~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
+||+|+||||+|+.|++.+.
T Consensus 606 ~lP~T~sGKi~r~~Lr~~~~ 625 (652)
T TIGR01217 606 GIPHTLTGKRVEVAVKRVLQ 625 (652)
T ss_pred CCCCCCCccChHHHHHHHHc
Confidence 99999999999999988754
No 41
>PLN03052 acetate--CoA ligase; Provisional
Probab=100.00 E-value=4.6e-55 Score=597.31 Aligned_cols=509 Identities=15% Similarity=0.124 Sum_probs=375.8
Q ss_pred HHHHhhccccccCCceEEEEEcCC--CceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHH
Q 037878 473 GYLKHWGTHRITQKKTLFTWINEE--GVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGC 550 (2280)
Q Consensus 473 ~~l~~~a~~~~~~d~~A~~~~~~~--g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~ 550 (2280)
..|++++.+ +|+++|+++.+++ +...+++||+||.++++++|+.|++. |+++||+|+++++|++|+++++|||
T Consensus 179 ~~l~~~~~~--~pd~~Ai~~~~e~~~~~~~~~~Ty~eL~~~v~~lA~~L~~~---Gv~~GdrVai~~pn~~e~via~LA~ 253 (728)
T PLN03052 179 CCLTPKPSK--TDDSIAIIWRDEGSDDLPVNRMTLSELRSQVSRVANALDAL---GFEKGDAIAIDMPMNVHAVIIYLAI 253 (728)
T ss_pred HHHHHHhcc--CCCCeEEEEECCCCCCCceEEeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHHHHHHHH
Confidence 355555433 4899999988753 22347899999999999999999998 9999999999999999999999999
Q ss_pred HHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhc---------cCCCCCCCcc------------
Q 037878 551 MRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVR---------VGSWPNLPWL------------ 609 (2280)
Q Consensus 551 l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~---------~~~~~~~~~~------------ 609 (2280)
+++|++++|++++++.++ +.+++++++++++++++.....-+ ....+....+
T Consensus 254 ~~~Gav~vpi~p~~~~~~-------l~~rl~~~~~k~lit~d~~~~~gk~~~~~~~~~~~~~~~~iv~~~~~~~~~~~~~ 326 (728)
T PLN03052 254 ILAGCVVVSIADSFAPSE-------IATRLKISKAKAIFTQDVIVRGGKSIPLYSRVVEAKAPKAIVLPADGKSVRVKLR 326 (728)
T ss_pred HHcCCEEEeeCCCCCHHH-------HHHHHHhcCceEEEEcCccccCCcccchHHHHHHhcCCcEEEEeCCCCccccccc
Confidence 999999999999999988 889999999999999765321000 0000000000
Q ss_pred ----ccccccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCc
Q 037878 610 ----HTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQ 685 (2280)
Q Consensus 610 ----~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl 685 (2280)
.++++...................++|++||+|||||||+||||+++|++++..+......+++.++|++++.+|+
T Consensus 327 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~IlyTSGTTG~PKgVv~sh~~~l~~~~~~~~~~~l~~~d~~~~~~~l 406 (728)
T PLN03052 327 EGDMSWDDFLARANGLRRPDEYKAVEQPVEAFTNILFSSGTTGEPKAIPWTQLTPLRAAADAWAHLDIRKGDIVCWPTNL 406 (728)
T ss_pred cCCccHHHHHhccccccccccccccccCCCCcEEEEecCCCCCCCceEEECchHHHHHHHHHHHhcCCCCCcEEEECCCc
Confidence 0000000000000000001112356899999999999999999999999988777666666788999999999999
Q ss_pred hhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEE
Q 037878 686 YHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLM 765 (2280)
Q Consensus 686 ~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~ 765 (2280)
+|+++. ..++.+|..|++++++++.. ++..++++++++++|++.++|++++.+.+... ....++++||.++
T Consensus 407 ~w~~g~-~~v~~~L~~Gat~vl~~g~p---~~~~~~~~i~~~~vT~l~~~Pt~l~~l~~~~~-----~~~~dlssLr~i~ 477 (728)
T PLN03052 407 GWMMGP-WLVYASLLNGATLALYNGSP---LGRGFAKFVQDAKVTMLGTVPSIVKTWKNTNC-----MAGLDWSSIRCFG 477 (728)
T ss_pred HHHhHH-HHHHHHHHhCCEEEEeCCCC---CCChHHHHHHHHCCCEEEECHHHHHHHHhcCC-----cccCChhheeEEE
Confidence 999997 46789999999999987532 45569999999999999999999988765321 1236789999999
Q ss_pred EecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCC
Q 037878 766 VAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPET 845 (2280)
Q Consensus 766 ~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~ 845 (2280)
+|||+++++...++.+.+. ...+.|.||+||++..+..... .. ....+++|.|.+|++++|+|+++
T Consensus 478 s~Ge~l~~~~~~~~~~~~~-----~~~i~~~yG~TE~~~~~~~~~~-~~--------~~~~g~~g~p~~g~~v~v~d~~g 543 (728)
T PLN03052 478 STGEASSVDDYLWLMSRAG-----YKPIIEYCGGTELGGGFVTGSL-LQ--------PQAFAAFSTPAMGCKLFILDDSG 543 (728)
T ss_pred ecCCCCCHHHHHHHHHhcC-----CCCeEeeccChhhCcccccCCC-CC--------CCCCCccccCCCCceEEEECCCC
Confidence 9999999998777666531 2468999999999764332111 01 11246789999999999999875
Q ss_pred CcccCCCCC--eeEEEEcCC--CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECC
Q 037878 846 SEEIGEPGK--EGEVWISSP--SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAG 920 (2280)
Q Consensus 846 ~~~~~p~G~--~GEL~i~Gp--~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G 920 (2280)
+.+|.|+ .|||+++++ +...+|+|++ .+..-|... +...+++||+|||+++++ ||+++|+||+||+||++|
T Consensus 544 --~~v~~g~~~~GEL~v~~~~~~~~~~~~~~~-~~~~yf~~~-p~~~g~~~~~tGDl~~~d~dG~l~i~GR~Dd~I~~~G 619 (728)
T PLN03052 544 --NPYPDDAPCTGELALFPLMFGASSTLLNAD-HYKVYFKGM-PVFNGKILRRHGDIFERTSGGYYRAHGRADDTMNLGG 619 (728)
T ss_pred --CCCCCCCCceEEEEEeCCCCCCCccccCch-hhhhhhhcC-CCCCCCEEEecCceEEECCCCeEEEEecCCCEEeeCC
Confidence 3446775 699999875 3456788764 344444322 223456799999999997 999999999999999999
Q ss_pred eeechHHHHHHHH-hccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC-HHHHHHHHHHHHHhc
Q 037878 921 RNVYSADVEKTVE-SSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-KDVIENIKTRVVEEH 998 (2280)
Q Consensus 921 ~rI~~~EIE~~L~-~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-~~l~~~l~~~l~~~~ 998 (2280)
+||+|.|||++|. .||+|.+ ++|++++++..+. ...+++++. ...++...+ +++++.+++.+.+++
T Consensus 620 ~rI~~~EIE~~l~~~~p~V~e---aaVvg~~d~~~g~--------e~~~afVvl-~~~~g~~~~~~~L~~~i~~~i~~~l 687 (728)
T PLN03052 620 IKVSSVEIERVCNAADESVLE---TAAIGVPPPGGGP--------EQLVIAAVL-KDPPGSNPDLNELKKIFNSAIQKKL 687 (728)
T ss_pred EEeCHHHHHHHHHhcCCCcce---EEEEeeecCCCCc--------EEEEEEEEE-ecCCCCCCCHHHHHHHHHHHHHhhc
Confidence 9999999999995 7898875 8999987753220 112233332 111333323 678888888887766
Q ss_pred CcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 999 GVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 999 ~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
...+.+..++.+++||+|.||||+|+.|++.+.+
T Consensus 688 ~~~~~p~~i~~v~~lP~T~sGKi~Rr~Lr~~~~~ 721 (728)
T PLN03052 688 NPLFKVSAVVIVPSFPRTASNKVMRRVLRQQLAQ 721 (728)
T ss_pred CCccCCCEEEEcCCCCCCCchHHHHHHHHHHHHh
Confidence 5445555666779999999999999999988754
No 42
>PLN02860 o-succinylbenzoate-CoA ligase
Probab=100.00 E-value=5.7e-55 Score=589.49 Aligned_cols=502 Identities=20% Similarity=0.260 Sum_probs=377.8
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++.+.+. |+++|+...+ +++||+||+++++++|+.|.++ |+++||+|+++++|++++++++
T Consensus 6 ~~~~~~~~~~~~~~~--p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~---Gv~~gd~V~v~~~n~~~~~~~~ 74 (563)
T PLN02860 6 QAHICQCLTRLATLR--GNAVVTISGN------RRRTGHEFVDGVLSLAAGLLRL---GLRNGDVVAIAALNSDLYLEWL 74 (563)
T ss_pred hhHHHHHHHHHHHhc--CCceEEecCC------ceeeHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCCHHHHHHH
Confidence 346788888888764 8889886421 5799999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhc---cCCCCCCCccc-cc-----------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVR---VGSWPNLPWLH-TD----------- 612 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~---~~~~~~~~~~~-~~----------- 612 (2280)
|||+++|++++|+++..+.++ +.++++++++++++++........ ....+...... .+
T Consensus 75 la~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 147 (563)
T PLN02860 75 LAVACAGGIVAPLNYRWSFEE-------AKSAMLLVRPVMLVTDETCSSWYEELQNDRLPSLMWQVFLESPSSSVFIFLN 147 (563)
T ss_pred HHHhhccEEEEeCCcccCHHH-------HHHHHHhcCceEEEEecccchHHHHHhhccCCceeEEEEecCcccccccchh
Confidence 999999999999999999888 889999999999999765321110 00111111000 00
Q ss_pred ccccccccccc--ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhh
Q 037878 613 SWVKNSKNLLA--ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMG 690 (2280)
Q Consensus 613 ~~~~~~~~~~~--~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 690 (2280)
.+......... ..........++++++|+|||||||.||||+++|++++.........++..++|+++.++|++|+++
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 227 (563)
T PLN02860 148 SFLTTEMLKQRALGTTELDYAWAPDDAVLICFTSGTTGRPKGVTISHSALIVQSLAKIAIVGYGEDDVYLHTAPLCHIGG 227 (563)
T ss_pred hccccchhccCccccccccCCCCCCCeEEEEecCCCCCCCceEEeehHHHHHHHHHHHhhcCCCCCCEEEEecCchhhcc
Confidence 00000000000 0000112346789999999999999999999999999888777777788999999999999999999
Q ss_pred HHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCC
Q 037878 691 LIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEP 770 (2280)
Q Consensus 691 l~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~ 770 (2280)
+. .++.++..|+++++.+. + ++..+++.++++++|++.++|+++..+++...... ...+++++|.+++||++
T Consensus 228 ~~-~~~~~l~~G~~~v~~~~--~--~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~~---~~~~~~~lr~~~~gG~~ 299 (563)
T PLN02860 228 LS-SALAMLMVGACHVLLPK--F--DAKAALQAIKQHNVTSMITVPAMMADLISLTRKSM---TWKVFPSVRKILNGGGS 299 (563)
T ss_pred HH-HHHHHHHcCceEEecCC--C--CHHHHHHHHHHhCCeeEEeChHHHHHHHHhhhhhh---ccccccceeEEEeCCCc
Confidence 84 57889999999888653 3 89999999999999999999999988876543211 11457899999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCcee-------------ecCCCceeeccccCCCCCce
Q 037878 771 VRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPII-------------LDWQGRVCCGYVDQNDPDVD 837 (2280)
Q Consensus 771 l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~-------------~~~~g~~~~g~vG~p~pg~~ 837 (2280)
+++++.++|.+.+ ++..++|.||+||++..++.......... ..........++|+|+|+++
T Consensus 300 l~~~~~~~~~~~~-----~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~ 374 (563)
T PLN02860 300 LSSRLLPDAKKLF-----PNAKLFSAYGMTEACSSLTFMTLHDPTLESPKQTLQTVNQTKSSSVHQPQGVCVGKPAPHVE 374 (563)
T ss_pred CCHHHHHHHHHhc-----CCCceecCCCccccCcccccccccccccccchhhhhhhcccccccccccCCcccCCccCCcE
Confidence 9999999999875 46789999999999865543221110000 00000111236899999999
Q ss_pred EEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeE
Q 037878 838 IRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLI 916 (2280)
Q Consensus 838 v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~I 916 (2280)
++|+|++ +|++|||+|+|++++.|||++|+.|++.|.. +|||+|||+|+++ ||+++|+||+||+|
T Consensus 375 v~i~~~~-------~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~-------~g~~~TGDl~~~d~dG~l~~~GR~~d~i 440 (563)
T PLN02860 375 LKIGLDE-------SSRVGRILTRGPHVMLGYWGQNSETASVLSN-------DGWLDTGDIGWIDKAGNLWLIGRSNDRI 440 (563)
T ss_pred EEEecCC-------CCceeEEEEecCcccccccCCccccchhccC-------CCeEEccceEEEcCCCCEEEeeccccee
Confidence 9999864 5789999999999999999999999988753 4899999999997 99999999999999
Q ss_pred EECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC---------------C
Q 037878 917 IVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK---------------P 981 (2280)
Q Consensus 917 Ki~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~---------------~ 981 (2280)
|++|+||+|.|||++|.+||+|.+ |+|++++++..++ ..+++++. .++. .
T Consensus 441 ~~~G~~v~p~eIE~~l~~~p~V~~---~~v~~~~~~~~~~---------~~~a~v~~---~~~~~~~~~~~~~~~~~~~~ 505 (563)
T PLN02860 441 KTGGENVYPEEVEAVLSQHPGVAS---VVVVGVPDSRLTE---------MVVACVRL---RDGWIWSDNEKENAKKNLTL 505 (563)
T ss_pred EECCEEccHHHHHHHHHhCCCcce---eEEEEEecCcCCc---------eEEEEEEE---CCccccccccchhhcccccc
Confidence 999999999999999999999975 8899987764331 12223322 2220 1
Q ss_pred CCHHHHHHHHHH-HHHhcCcceeEEEEec-CCCccCCCCcccchHHHHHHhhcC
Q 037878 982 VDKDVIENIKTR-VVEEHGVTVASVKLIK-PRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 982 ~~~~l~~~l~~~-l~~~~~~~~~~~~lv~-~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
..+++.+.++++ |+. +++| ..++. .++||+|++|||+|++|++++.+.
T Consensus 506 ~~~~l~~~~~~~~L~~-~~~P---~~~~~~~~~lP~t~~GKi~r~~L~~~~~~~ 555 (563)
T PLN02860 506 SSETLRHHCREKNLSR-FKIP---KLFVQWRKPFPLTTTGKIRRDEVRREVLSH 555 (563)
T ss_pred cHHHHHHHHhhCcccc-cccc---eEEEEEecCCCCCcccchhHHHHHHHHHHH
Confidence 113444555442 433 4444 33322 477999999999999999987543
No 43
>PLN02861 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=4.3e-55 Score=597.11 Aligned_cols=527 Identities=19% Similarity=0.225 Sum_probs=375.4
Q ss_pred ccCcccccCCCCCCCCCCCCHHHHHHhhccccccCCceEEEEE---cCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCC
Q 037878 451 ARNFKELEELPGVEFPELSSLDGYLKHWGTHRITQKKTLFTWI---NEEGVAVNQSTYEELDANASRIAHKLLTSRKPVI 527 (2280)
Q Consensus 451 ~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~---~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv 527 (2280)
+++....+++... .+...++.+++++.+++. |+++|+.+. +.+...++.+||+||.++++++|++|.++ |+
T Consensus 26 ~~~~~~~~~~~~~-~~~~~t~~~~l~~~~~~~--p~~~al~~~~~~~~~~g~~~~~Ty~el~~~v~~lA~~L~~~---Gv 99 (660)
T PLN02861 26 YRSIYAKDGLLDL-PADIDSPWQFFSDAVKKY--PNNQMLGRRQVTDSKVGPYVWLTYKEVYDAAIRIGSAIRSR---GV 99 (660)
T ss_pred ccccccccccccC-CCCCCCHHHHHHHHHHhC--CCCCeEEEEecCCCCCCCceEEEHHHHHHHHHHHHHHHHHc---CC
Confidence 4443333433332 355678899999888774 789988653 22112346799999999999999999998 99
Q ss_pred CCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCC-
Q 037878 528 KPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWP- 604 (2280)
Q Consensus 528 ~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~- 604 (2280)
++||+|+|+++|++||++++|||+++|+++||+++.++.++ +.++++++++++++++.+....+... ..+
T Consensus 100 ~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~-------l~~il~~s~~~~v~~~~~~~~~~~~~~~~~~~ 172 (660)
T PLN02861 100 NPGDRCGIYGSNCPEWIIAMEACNSQGITYVPLYDTLGANA-------VEFIINHAEVSIAFVQESKISSILSCLPKCSS 172 (660)
T ss_pred CCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHH-------HHHHHHcCCCCEEEECHHHHHHHHHhhhhCCC
Confidence 99999999999999999999999999999999999999888 88999999999999976543322110 000
Q ss_pred CCCc-ccccccc--------------ccccccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHH
Q 037878 605 NLPW-LHTDSWV--------------KNSKNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLM 667 (2280)
Q Consensus 605 ~~~~-~~~~~~~--------------~~~~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~ 667 (2280)
.+.. +..++.. ....+.. ........+..++|+|+|+|||||||.||||++||+|+++.+...
T Consensus 173 ~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~i~yTSGTTG~PKGV~lth~~l~~~~~~~ 252 (660)
T PLN02861 173 NLKTIVSFGDVSSEQKEEAEELGVSCFSWEEFSLMGSLDCELPPKQKTDICTIMYTSGTTGEPKGVILTNRAIIAEVLST 252 (660)
T ss_pred CCEEEEEECCCChhhhhhhhcCCcEEEEHHHHHHhCcccCCCCccCCCceEEEEecCCCCCCCCEEEEecHHHHHHHHHH
Confidence 1110 0000000 0000000 000111223468999999999999999999999999999887776
Q ss_pred HHHcC-----CCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHH
Q 037878 668 RKRYK-----STSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELM 742 (2280)
Q Consensus 668 ~~~~~-----~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l 742 (2280)
...++ ..++|++++++|++|.+++... +.+++.|+++++.. .++..+++.++++++|++.++|.+++.+
T Consensus 253 ~~~~~~~~~~~~~~d~~l~~lPl~H~~~~~~~-~~~l~~G~~v~~~~-----~~~~~~~~~i~~~~~T~~~~vP~~~~~l 326 (660)
T PLN02861 253 DHLLKVTDRVATEEDSYFSYLPLAHVYDQVIE-TYCISKGASIGFWQ-----GDIRYLMEDVQALKPTIFCGVPRVYDRI 326 (660)
T ss_pred HhccccccccCCCCCEEEEECcHHHHHHHHHH-HHHHHhCCEEEEeC-----CCHHHHHHHHHHhCCcEEeechHHHHHH
Confidence 55543 4678999999999999998654 45789999988763 2788999999999999999999999887
Q ss_pred HHHHhccc--------------------------------cccccc-------CC-CCccEEEEecCCCCHHHHHHHHHH
Q 037878 743 VRRLESSK--------------------------------DKVRSF-------DL-SSMKFLMVAAEPVRQTTVKRFVEL 782 (2280)
Q Consensus 743 ~~~~~~~~--------------------------------~~~~~~-------~l-~~Lr~l~~gGe~l~~~l~~~~~~~ 782 (2280)
.+...... ...... .+ +++|.+++||+++++++ .+|.+.
T Consensus 327 ~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~lg~~lr~~~~Ggapl~~~~-~~~~~~ 405 (660)
T PLN02861 327 YTGIMQKISSGGMLRKKLFDFAYNYKLGNLRKGLKQEEASPRLDRLVFDKIKEGLGGRVRLLLSGAAPLPRHV-EEFLRV 405 (660)
T ss_pred HHHHHHHHhccCHHHHHHHHHHHHHHHHHHhcCCCCcCccHhHHHHHHHHHHHHhCCcEEEEEECCCCCCHHH-HHHHHH
Confidence 64211100 000000 12 58999999999999996 556665
Q ss_pred hcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEc-CCCCcccCCCCCeeEEEEc
Q 037878 783 TRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVN-PETSEEIGEPGKEGEVWIS 861 (2280)
Q Consensus 783 ~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd-~~~~~~~~p~G~~GEL~i~ 861 (2280)
+ ....++|+||+||+++.+++..... ....+++|+|+|+++++|+| ++++....+.++.|||+|+
T Consensus 406 ~-----~~~~l~~~YG~TE~~~~~~~~~~~~---------~~~~gsvG~p~p~~ev~i~d~~~~g~~~~~~~~~GEi~vr 471 (660)
T PLN02861 406 T-----SCSVLSQGYGLTESCGGCFTSIANV---------FSMVGTVGVPMTTIEARLESVPEMGYDALSDVPRGEICLR 471 (660)
T ss_pred H-----cCCCeeEecchhhhhhceeeccccc---------CCCCCCccCccCceEEEEEEccccCcccCCCCCceeEEEc
Confidence 4 2346899999999987655432111 11247899999999999998 3333233346678999999
Q ss_pred CCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCc
Q 037878 862 SPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHI 939 (2280)
Q Consensus 862 Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~ 939 (2280)
||+++.||||+|+.|+++|. +|||||||+|+++ ||.|+|+||+||+||+ +|+||+|.|||++|.+||.|.
T Consensus 472 Gp~v~~GY~~~pe~T~~~f~--------dGw~~TGDlg~~d~dG~l~i~GR~kd~Ik~~~G~~I~p~eIE~~l~~~p~V~ 543 (660)
T PLN02861 472 GNTLFSGYHKRQDLTEEVLI--------DGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVAVENLENTYSRCPLIA 543 (660)
T ss_pred CCcccccccCCHHHHHhhhh--------ccCcccCceEEECCCCcEEEEeccccceEcCCCeEEcHHHHHHHHhcCCCee
Confidence 99999999999999999995 3899999999997 9999999999999998 799999999999999999997
Q ss_pred CCceeEEEeccccccccccccccCCCCceEEEEEEEec--------CCCCCC-H------HHHHHHHHHHHH---h--cC
Q 037878 940 RPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVR--------DGKPVD-K------DVIENIKTRVVE---E--HG 999 (2280)
Q Consensus 940 ~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~--------~~~~~~-~------~l~~~l~~~l~~---~--~~ 999 (2280)
+ |+|++.+.. ...+++++.. .. .+...+ . +....+.+.+.. . +.
T Consensus 544 ~---a~V~G~~~~------------~~~~A~vv~~-~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 607 (660)
T PLN02861 544 S---IWVYGNSFE------------SFLVAVVVPD-RQALEDWAANNNKTGDFKSLCKNLKARKYILDELNSTGKKLQLR 607 (660)
T ss_pred E---EEEEecCCc------------ceeEEEEEcC-HHHHHHHHHHcCCCCCHHHHhcCHHHHHHHHHHHHHHHHHcCCC
Confidence 5 888886521 1223333321 10 000000 1 122333333332 1 22
Q ss_pred cceeEEEEec-CCCc-----cCCCCcccchHHHHHHhhcCCC
Q 037878 1000 VTVASVKLIK-PRTM-----SKTTSGKIKRFECLKQFVDGTL 1035 (2280)
Q Consensus 1000 ~~~~~~~lv~-~~~l-----P~t~sGKvdR~~L~~~~~~~~~ 1035 (2280)
....+..+.. .+.+ .+|+++|+.|+.+.+.|.+.+.
T Consensus 608 ~~e~i~~~~l~~~~ft~~ng~lT~t~K~~R~~i~~~y~~~I~ 649 (660)
T PLN02861 608 GFEMLKAIHLEPNPFDIERDLITPTFKLKRPQLLKYYKDCID 649 (660)
T ss_pred CcceeeEEEEeCCCCCcccCcCCHHHhhhHHHHHHHHHHHHH
Confidence 2222223322 4556 7999999999999999977553
No 44
>PRK04319 acetyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.2e-54 Score=587.72 Aligned_cols=503 Identities=20% Similarity=0.282 Sum_probs=390.8
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
.+.+.+++.+... .|+++|+.+.++++ .+++||+||.++++++|+.|.+. |+++||+|+++++|++++++++||
T Consensus 44 ~~~~~~~~~~~~~-~~~~~a~~~~~~~~--~~~~Ty~el~~~v~~~A~~L~~~---gv~~gd~V~i~~~n~~~~~~~~la 117 (570)
T PRK04319 44 IAYEAIDRHADGG-RKDKVALRYLDASR--KEKYTYKELKELSNKFANVLKEL---GVEKGDRVFIFMPRIPELYFALLG 117 (570)
T ss_pred HHHHHHHHhhccC-CCCceEEEEECCCC--ceeecHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCHHHHHHHHH
Confidence 4556777776532 47999998865432 36899999999999999999998 999999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcc-ccccccc------ccccc-
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWL-HTDSWVK------NSKNL- 621 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~-~~~~~~~------~~~~~- 621 (2280)
|+++|++++|+++..+.++ +.+++++++++.++++............+....+ ..+.... ...+.
T Consensus 118 ~~~~G~v~vpl~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 190 (570)
T PRK04319 118 ALKNGAIVGPLFEAFMEEA-------VRDRLEDSEAKVLITTPALLERKPADDLPSLKHVLLVGEDVEEGPGTLDFNALM 190 (570)
T ss_pred HHHcCcEEcccccccCHHH-------HHHHHHccCCcEEEEChhhhhccchhcCCCceEEEEECCCcCCCcCccCHHHHH
Confidence 9999999999999999887 8899999999999998654332211111111100 0000000 00000
Q ss_pred -ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 622 -LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 622 -~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
............++|+++|+|||||||.||||+++|+++++.+......+++.++|++++..|++|.++....++.++.
T Consensus 191 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~g~~~~~~~~l~ 270 (570)
T PRK04319 191 EQASDEFDIEWTDREDGAILHYTSGSTGKPKGVLHVHNAMLQHYQTGKYVLDLHEDDVYWCTADPGWVTGTSYGIFAPWL 270 (570)
T ss_pred hhcCCcCCccccCCCCCEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhcCCCCCceEEecCChHHhhCchHHHHHHHh
Confidence 0011112233467899999999999999999999999999888887788889999999999999999998888999999
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|+++++... . .++..+++.++++++|++.++|++++.+.+..... ....++++||.+++||+++++++.+++.
T Consensus 271 ~G~~~v~~~~-~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---~~~~~~~~lr~~~~gG~~l~~~~~~~~~ 344 (570)
T PRK04319 271 NGATNVIDGG-R--FSPERWYRILEDYKVTVWYTAPTAIRMLMGAGDDL---VKKYDLSSLRHILSVGEPLNPEVVRWGM 344 (570)
T ss_pred cCceEEEECC-C--CCHHHHHHHHHHcCCeEEEeCHHHHHHHHhcCCcc---cccCCcccceEEEEcccCCCHHHHHHHH
Confidence 9999988653 2 38999999999999999999999998887542211 1225688999999999999999999888
Q ss_pred HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEE
Q 037878 781 ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWI 860 (2280)
Q Consensus 781 ~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i 860 (2280)
+.+ +..+++.||+||++..+++.... . ....+++|+|+|+++++|+|+++. .+|+|+.|||+|
T Consensus 345 ~~~------g~~i~~~YG~tE~~~~~~~~~~~-~--------~~~~~~~G~p~~g~~~~i~d~~~~--~~~~g~~Gel~i 407 (570)
T PRK04319 345 KVF------GLPIHDNWWMTETGGIMIANYPA-M--------DIKPGSMGKPLPGIEAAIVDDQGN--ELPPNRMGNLAI 407 (570)
T ss_pred HHh------CCCeEeceeecccCCEEEecCCC-C--------CCCCCcCcCCCCCCEEEEECCCCC--CCCCCCceEEEE
Confidence 764 46799999999998765543211 0 122478999999999999998753 347999999999
Q ss_pred cC--CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccC
Q 037878 861 SS--PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTE 937 (2280)
Q Consensus 861 ~G--p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~ 937 (2280)
+| |++++||+|+|+.|++.|. ++||+|||+++++ ||.++++||+||+||++|++|+|.|||++|.+||+
T Consensus 408 ~~~~~~~~~GY~~~~~~~~~~~~--------~gw~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~i~p~eIE~~l~~~~~ 479 (570)
T PRK04319 408 KKGWPSMMRGIWNNPEKYESYFA--------GDWYVSGDSAYMDEDGYFWFQGRVDDVIKTSGERVGPFEVESKLMEHPA 479 (570)
T ss_pred cCCCChHHhHhcCCHHHhhhhhc--------CCceEeCcEEEECCCeeEEEEecCCCEEEECCEEECHHHHHHHHhhCCC
Confidence 87 8999999999999999885 3799999999997 99999999999999999999999999999999999
Q ss_pred CcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCC
Q 037878 938 HIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTT 1017 (2280)
Q Consensus 938 v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~ 1017 (2280)
|.+ ++|++.+++..+ +.+.+++. ..++....+++.+.+++.+.++++.+..|..++.+++||+|+
T Consensus 480 V~~---~~v~g~~~~~~g----------~~~~a~v~--~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~v~~iP~t~ 544 (570)
T PRK04319 480 VAE---AGVIGKPDPVRG----------EIIKAFVA--LRPGYEPSEELKEEIRGFVKKGLGAHAAPREIEFKDKLPKTR 544 (570)
T ss_pred eee---cceecccCcCCc----------eEEEEEEE--ECCCCCCCHHHHHHHHHHHHHhcccccCCcEEEEeCCCCCCC
Confidence 875 888888776433 22222222 233333334445566666655555555555666679999999
Q ss_pred CcccchHHHHHHhh
Q 037878 1018 SGKIKRFECLKQFV 1031 (2280)
Q Consensus 1018 sGKvdR~~L~~~~~ 1031 (2280)
+||++|++|+++..
T Consensus 545 ~GKv~r~~L~~~~~ 558 (570)
T PRK04319 545 SGKIMRRVLKAWEL 558 (570)
T ss_pred chhhhHHHHHHHHh
Confidence 99999999988753
No 45
>PRK09274 peptide synthase; Provisional
Probab=100.00 E-value=1.5e-54 Score=585.43 Aligned_cols=515 Identities=20% Similarity=0.276 Sum_probs=382.1
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCC----ceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEG----VAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g----~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
.++.++++..+++. |+++|+.+.+.++ ...+.+||+||.++++++|++|.+. |+++||+|+++++|+++++
T Consensus 6 ~~~~~~l~~~a~~~--p~~~a~~~~~~~~~~~~~~~~~~Ty~~l~~~~~~~A~~L~~~---g~~~gd~V~~~~~n~~~~~ 80 (552)
T PRK09274 6 ANIARHLPRAAQER--PDQLAVAVPGGRGADGKLAYDELSFAELDARSDAIAHGLNAA---GIGRGMRAVLMVTPSLEFF 80 (552)
T ss_pred hhHHHHHHHHHHhC--CCcceEEeccCCCCccccccCcccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCcHHHH
Confidence 35677787777663 7899987754321 1234899999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccc--cchhhccCCCCCCC-ccccccc-------
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIG--YHSAVRVGSWPNLP-WLHTDSW------- 614 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~--~~~~~~~~~~~~~~-~~~~~~~------- 614 (2280)
+++|||+++|++++|+++..+.++ +..+++++++++++++.. ....+......... .+..+..
T Consensus 81 ~~~la~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~ 153 (552)
T PRK09274 81 ALTFALFKAGAVPVLVDPGMGIKN-------LKQCLAEAQPDAFIGIPKAHLARRLFGWGKPSVRRLVTVGGRLLWGGTT 153 (552)
T ss_pred HHHHHHHHcCeEEEEcCCCccHHH-------HHHHHHhcCCCEEEeccHHHHHHHHhccCccchhheeccccccccCCcc
Confidence 999999999999999999999888 889999999999998642 11111100000000 0000000
Q ss_pred cccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHH
Q 037878 615 VKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 615 ~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
...................++++++|+|||||||.||||+++|+++.+.+......+++.++++.++.+|++|..++
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~pl~~~~~~--- 230 (552)
T PRK09274 154 LATLLRDGAAAPFPMADLAPDDMAAILFTSGSTGTPKGVVYTHGMFEAQIEALREDYGIEPGEIDLPTFPLFALFGP--- 230 (552)
T ss_pred HHHhcccCccccCCCCCCCCCCeEEEEECCCCCCCCceEEecHHHHHHHHHHHHHHhCCCCCceeeeccCHHHhhhh---
Confidence 00000000011112233567899999999999999999999999999999888888999999999999998875543
Q ss_pred HHHHHHccceEEEeCcc---ccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCC
Q 037878 695 LFTAMVGGSTAILFSPL---TFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPV 771 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~---~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l 771 (2280)
..|+++++.+.. ....+|..+++.++++++|++.++|+++..+.+..... ..++++||.+++|||++
T Consensus 231 -----~~g~~~~~~~~~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-----~~~~~~lr~~~~gG~~~ 300 (552)
T PRK09274 231 -----ALGMTSVIPDMDPTRPATVDPAKLFAAIERYGVTNLFGSPALLERLGRYGEAN-----GIKLPSLRRVISAGAPV 300 (552)
T ss_pred -----hhCCeEEecCcccccccccCHHHHHHHHHHcCCeEEeccHHHHHHHHHHhhhc-----CCCCchhhEEEecCCcC
Confidence 457777664321 11237899999999999999999999999888754332 24688999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCC-----
Q 037878 772 RQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETS----- 846 (2280)
Q Consensus 772 ~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~----- 846 (2280)
++++.+++.+.+. .++.++|.||+||++.+++....................++|+|+|+++++|+|+++.
T Consensus 301 ~~~~~~~~~~~~~----~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~~~~~~~ivd~~~~~~~~~ 376 (552)
T PRK09274 301 PIAVIERFRAMLP----PDAEILTPYGATEALPISSIESREILFATRAATDNGAGICVGRPVDGVEVRIIAISDAPIPEW 376 (552)
T ss_pred CHHHHHHHHHHcC----CCceEEccccccccceeEeecchhhhccccccccCCCCcccCccCCCceEEEEeccccccccc
Confidence 9999999998863 2478999999999987655332110000000000111236899999999999996321
Q ss_pred --cccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeee
Q 037878 847 --EEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNV 923 (2280)
Q Consensus 847 --~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI 923 (2280)
...++.|++|||+|+|+.++.||||+|+.|++.|..+ ..+.+||+|||+|+++ ||.++|+||+||+||++|+||
T Consensus 377 ~~~~~~~~g~~Gel~v~g~~~~~GY~~~~~~t~~~~~~~---~~g~~w~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v 453 (552)
T PRK09274 377 DDALRLATGEIGEIVVAGPMVTRSYYNRPEATRLAKIPD---GQGDVWHRMGDLGYLDAQGRLWFCGRKAHRVETAGGTL 453 (552)
T ss_pred cccccCCCCCeeEEEEecCcccccccCChHHhhhhhccc---CCCCcEEEcCCEEEEccCCcEEEEeccCCeEEECCEEE
Confidence 2345799999999999999999999999999887532 1223599999999997 999999999999999999999
Q ss_pred chHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcce
Q 037878 924 YSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTV 1002 (2280)
Q Consensus 924 ~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~ 1002 (2280)
+|.|||++|.+||+|.+ |+|++++++. .+...++ ++..++... ..++.+.+++.+.. ++.+.
T Consensus 454 ~p~eIE~~l~~~p~V~~---~~v~~~~~~~-----------~~~~~~~--v~~~~~~~~~~~~l~~~l~~~l~~-~~~~~ 516 (552)
T PRK09274 454 YTIPCERIFNTHPGVKR---SALVGVGVPG-----------AQRPVLC--VELEPGVACSKSALYQELRALAAA-HPHTA 516 (552)
T ss_pred CcHHHHHHHHhCcccce---eEEEEeCCCC-----------CceEEEE--EEccCccccchHHHhhhhHHHHHh-cCCCc
Confidence 99999999999999976 8888876531 1122222 223333222 24577788887765 56666
Q ss_pred eEEEEecCCCccCC--CCcccchHHHHHHhhc
Q 037878 1003 ASVKLIKPRTMSKT--TSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1003 ~~~~lv~~~~lP~t--~sGKvdR~~L~~~~~~ 1032 (2280)
.+..++.+++||+| +||||||++|++++.+
T Consensus 517 ~~~~~~~~~~lP~t~~~~GKi~r~~L~~~~~~ 548 (552)
T PRK09274 517 GIERFLIHPSFPVDIRHNAKIFREKLAVWAAK 548 (552)
T ss_pred ceeEEeccCCCCccccccccccHHHHHHHHHH
Confidence 66777778999999 7999999999887654
No 46
>PRK07788 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-54 Score=584.53 Aligned_cols=486 Identities=19% Similarity=0.238 Sum_probs=377.0
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
++.+++++.+++. |+++|+...+ +++||+||.++++++|+.|.+. |+++||+|+++++|++++++++||
T Consensus 50 ~~~~~~~~~a~~~--pd~~Al~~~~------~~~Ty~el~~~~~~la~~L~~~---gi~~gd~V~i~~~n~~~~~~~~la 118 (549)
T PRK07788 50 PFAGLVAHAARRA--PDRAALIDER------GTLTYAELDEQSNALARGLLAL---GVRAGDGVAVLARNHRGFVLALYA 118 (549)
T ss_pred hHHHHHHHHHHHC--CCceEEEECC------CceeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHH
Confidence 7889998888874 8999987422 5799999999999999999998 899999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCccccccc--c------cccc
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLHTDSW--V------KNSK 619 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~--~------~~~~ 619 (2280)
|+++|+++||+++..+.++ +..+++++++++++++.+....+... ....+..+..... . ....
T Consensus 119 ~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 191 (549)
T PRK07788 119 AGKVGARIILLNTGFSGPQ-------LAEVAAREGVKALVYDDEFTDLLSALPPDLGRLRAWGGNPDDDEPSGSTDETLD 191 (549)
T ss_pred HHhcCCEEEEeCCCCCHHH-------HHHHHHhcCCcEEEECchhHHHHHhhccccccceEEEEecCccccCCcCcccHH
Confidence 9999999999999999888 88999999999999987654433211 0111111100000 0 0000
Q ss_pred ccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHH
Q 037878 620 NLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAM 699 (2280)
Q Consensus 620 ~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L 699 (2280)
+..........+..+++.++|+|||||||.||||+++|+++.+.+......+++..+++++..+|++|..++. .++.++
T Consensus 192 ~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~-~~~~~l 270 (549)
T PRK07788 192 DLIAGSSTAPLPKPPKPGGIVILTSGTTGTPKGAPRPEPSPLAPLAGLLSRVPFRAGETTLLPAPMFHATGWA-HLTLAM 270 (549)
T ss_pred HHhcCCCCCCCCCCCCCCcEEEECCCCCCCCCEEeccCccHHHHHHHHHhhCCCCcCCeEEEccchHHHHHHH-HHHHHH
Confidence 0000001111223457889999999999999999999999999888888888889999999999999999984 567788
Q ss_pred HccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHH
Q 037878 700 VGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRF 779 (2280)
Q Consensus 700 ~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~ 779 (2280)
..|+++++.. ..+|..+++.++++++|++.++|+++..+++..... ....++++||.+++|||++++++.++|
T Consensus 271 ~~G~~~v~~~----~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---~~~~~~~~lr~i~~gG~~l~~~~~~~~ 343 (549)
T PRK07788 271 ALGSTVVLRR----RFDPEATLEDIAKHKATALVVVPVMLSRILDLGPEV---LAKYDTSSLKIIFVSGSALSPELATRA 343 (549)
T ss_pred HhCCEEEECC----CCCHHHHHHHHHHhCCcEEEEHHHHHHHHHhCcccc---cCCCCCCceeEEEEeCCCCCHHHHHHH
Confidence 9999988864 238999999999999999999999998887643321 112467899999999999999999999
Q ss_pred HHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEE
Q 037878 780 VELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVW 859 (2280)
Q Consensus 780 ~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~ 859 (2280)
.+.+ +..++|.||+||++..++...... ....+++|+|+++++++|+|+++ ..++.|+.|||+
T Consensus 344 ~~~~------~~~l~~~YG~TE~~~~~~~~~~~~---------~~~~~~vG~~~~~~~~~i~d~~~--~~~~~g~~Gel~ 406 (549)
T PRK07788 344 LEAF------GPVLYNLYGSTEVAFATIATPEDL---------AEAPGTVGRPPKGVTVKILDENG--NEVPRGVVGRIF 406 (549)
T ss_pred HHHh------CccceeccCcchhchhhccChhhh---------hhcCCCcccCCCCcEEEEECCCc--CCCCCCCeEEEE
Confidence 9875 356999999999886544321110 11246789999999999999875 344689999999
Q ss_pred EcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCC
Q 037878 860 ISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 860 i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
|+|++++.||+++++. + + .++||+|||+++++ ||.++|+||+||+||++|+||+|.|||++|.++|+|
T Consensus 407 v~g~~~~~gY~~~~~~--~-~--------~~g~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~p~eIE~~l~~~~~V 475 (549)
T PRK07788 407 VGNGFPFEGYTDGRDK--Q-I--------IDGLLSSGDVGYFDEDGLLFVDGRDDDMIVSGGENVFPAEVEDLLAGHPDV 475 (549)
T ss_pred EeCCCccccccCCCcc--c-c--------cCCceecCceEEEcCCCCEEEeccCcceEEECCEEECHHHHHHHHHhCCCe
Confidence 9999999999998864 1 1 14899999999997 999999999999999999999999999999999999
Q ss_pred cCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCC
Q 037878 939 IRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTT 1017 (2280)
Q Consensus 939 ~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~ 1017 (2280)
.+ |+|++.+++..+ +...++++ ..++. ...+++.+.++++++. +++|. .++.+++||+|+
T Consensus 476 ~~---~~v~~~~~~~~g----------~~~~a~vv--~~~~~~~~~~~l~~~~~~~l~~-~~~P~---~i~~v~~lP~t~ 536 (549)
T PRK07788 476 VE---AAVIGVDDEEFG----------QRLRAFVV--KAPGAALDEDAIKDYVRDNLAR-YKVPR---DVVFLDELPRNP 536 (549)
T ss_pred eE---EEEECCcCcccc----------cEEEEEEE--eCCCCCCCHHHHHHHHHHhhhc-CCCCc---EEEEeCCCCCCC
Confidence 75 888887765432 22222222 22232 2235677777777764 55543 444559999999
Q ss_pred CcccchHHHHH
Q 037878 1018 SGKIKRFECLK 1028 (2280)
Q Consensus 1018 sGKvdR~~L~~ 1028 (2280)
+||+||++|++
T Consensus 537 ~GKi~r~~L~~ 547 (549)
T PRK07788 537 TGKVLKRELRE 547 (549)
T ss_pred CcCEeHHHhhc
Confidence 99999998754
No 47
>PRK05857 acyl-CoA synthetase; Validated
Probab=100.00 E-value=5.9e-54 Score=576.53 Aligned_cols=504 Identities=21% Similarity=0.303 Sum_probs=374.9
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
++.+.+.+.+++ +|+++|+...+.+ +.+||+||+++++++|+.|.+. |+++||+|+++++|++++++++||
T Consensus 15 ~~~~~l~~~a~~--~p~~~a~~~~~~~----~~~Ty~el~~~~~~~a~~L~~~---g~~~g~~V~i~~~~~~e~~~~~lA 85 (540)
T PRK05857 15 TVLDRVFEQARQ--QPEAIALRRCDGT----SALRYRELVAEVGGLAADLRAQ---SVSRGSRVLVISDNGPETYLSVLA 85 (540)
T ss_pred chHHHHHHHHhh--CCCcEEEeecCCC----ceeeHHHHHHHHHHHHHHHHHh---CcCCCCEEEEEcCCCHHHHHHHHH
Confidence 567777777776 4899998755432 4799999999999999999988 899999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCcccccccccc--cccccc-c
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLHTDSWVKN--SKNLLA-E 624 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~--~~~~~~-~ 624 (2280)
|+++|++++|+++..+.++ +.++++.++++.++++.......... .....+.+..+..... ...... .
T Consensus 86 ~~~~G~v~v~l~~~~~~~~-------l~~~~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 158 (540)
T PRK05857 86 CAKLGAIAVMADGNLPIAA-------IERFCQITDPAAALVAPGSKMASSAVPEALHSIPVIAVDIAAVTRESEHSLDAA 158 (540)
T ss_pred HHHcCeEEEecCccCCHHH-------HHHHHHhcCCceEEEeccchhccccccccccccceeEeeccccccccccccccc
Confidence 9999999999999999888 88899999999999986542111100 0011111111110000 000000 0
Q ss_pred cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 625 NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK----RYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 625 ~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
.........++++++++|||||||.||||++||+++.+....... .+....+++.+..+|++|++++. ..+.+++
T Consensus 159 ~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~l~-~~~~~l~ 237 (540)
T PRK05857 159 SLAGNADQGSEDPLAMIFTSGTTGEPKAVLLANRTFFAVPDILQKEGLNWVTWVVGETTYSPLPATHIGGLW-WILTCLM 237 (540)
T ss_pred ccccccCCCCCCeEEEEeCCCCCCCCCeEEEechhhhhhhHHhhhccccccccccCceeeecCCccccchHH-HHHHHhh
Confidence 001123346789999999999999999999999999876544322 23456778999999999999986 5678888
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|+++++.+ .++..+++.++++++|++..+|.++..+.+..... ..+++++|.+++||++++....+ +.
T Consensus 238 ~G~~~v~~~-----~~~~~~~~~i~~~~it~~~~~P~~~~~l~~~~~~~-----~~~~~~lr~~~~gG~~~~~~~~~-~~ 306 (540)
T PRK05857 238 HGGLCVTGG-----ENTTSLLEILTTNAVATTCLVPTLLSKLVSELKSA-----NATVPSLRLVGYGGSRAIAADVR-FI 306 (540)
T ss_pred cceeEEecC-----CChhHHHHHHHhcCcceEEeChHHHHHHHhccccC-----CCcCccceEEEEcCccCCchhHH-HH
Confidence 899877532 27889999999999999999999998887643222 25688999999999999887764 55
Q ss_pred HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCccc----CCCCCee
Q 037878 781 ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEI----GEPGKEG 856 (2280)
Q Consensus 781 ~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~----~p~G~~G 856 (2280)
+.+ ++++++.||+||++..+.......... .....+++|+|++|++++|+|+++.... ++.|+.|
T Consensus 307 ~~~------g~~i~~~YG~TE~~~~~~~~~~~~~~~-----~~~~~~~~G~~~~g~~v~i~d~~~~~~~~~~~~~~~~~G 375 (540)
T PRK05857 307 EAT------GVRTAQVYGLSETGCTALCLPTDDGSI-----VKIEAGAVGRPYPGVDVYLAATDGIGPTAPGAGPSASFG 375 (540)
T ss_pred HHh------CCeeecccCCCcCCceeeecccccccc-----cccccCCcCcccCCcEEEEECccccCccccccCCCCCcc
Confidence 442 567999999999985433221111110 1123478999999999999998754322 2458899
Q ss_pred EEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhc
Q 037878 857 EVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESS 935 (2280)
Q Consensus 857 EL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~ 935 (2280)
||+|+|++++.||+++++.|++.|. ++||+|||+|+++ ||.++|+||.||+||++|+||+|.|||++|..|
T Consensus 376 el~v~g~~~~~GY~~~~~~t~~~~~--------~g~~~TGDlg~~d~~g~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~ 447 (540)
T PRK05857 376 TLWIKSPANMLGYWNNPERTAEVLI--------DGWVNTGDLLERREDGFFYIKGRSSEMIICGGVNIAPDEVDRIAEGV 447 (540)
T ss_pred eEEEeCcchhhhhhCCccchhhhcC--------CCceeccceEEEcCCceEEEeccccccEecCCEEECHHHHHHHHHhC
Confidence 9999999999999999999999885 3799999999997 999999999999999999999999999999999
Q ss_pred cCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccC
Q 037878 936 TEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSK 1015 (2280)
Q Consensus 936 p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~ 1015 (2280)
|+|.+ |+|++++++..+ ..+.++++...........++.+.+++.+.+.++..+.|..+..++++|+
T Consensus 448 ~~V~~---~~v~~~~~~~~~----------~~~~~~vv~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~P~~v~~~~~iP~ 514 (540)
T PRK05857 448 SGVRE---AACYEIPDEEFG----------ALVGLAVVASAELDESAARALKHTIAARFRRESEPMARPSTIVIVTDIPR 514 (540)
T ss_pred CCeeE---EEEEecCccccc----------cceEEEEEeCCCCChhhHHHHHHHHHHHHHhhhccccCCeEEEEhhcCCC
Confidence 99875 888888765332 22333333211101111234556666666555554455566666799999
Q ss_pred CCCcccchHHHHHHhhcC
Q 037878 1016 TTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1016 t~sGKvdR~~L~~~~~~~ 1033 (2280)
|++||+||++|++.+...
T Consensus 515 t~~GKi~r~~l~~~~~~~ 532 (540)
T PRK05857 515 TQSGKVMRASLAAAATAD 532 (540)
T ss_pred CCCcceeHHHHHHhhhhc
Confidence 999999999998886543
No 48
>COG1021 EntE Peptide arylation enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=3.7e-55 Score=496.40 Aligned_cols=495 Identities=22% Similarity=0.308 Sum_probs=392.2
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.++|...|+++ ||++|++..+ +++||+||+++++++|..|+++ |+++||+|.+.+||..++++++
T Consensus 27 d~~l~d~L~~~A~~~--pdriAv~d~~------~~~sY~eLdqr~d~LAa~l~~l---Gi~~Gd~vlvQLpN~~ef~~~~ 95 (542)
T COG1021 27 DRTLTDILTDHAARY--PDRIAVIDGE------RRLSYAELDQRADRLAAGLRRL---GIKPGDTVLVQLPNVAEFYITF 95 (542)
T ss_pred CCcHHHHHHHHHhhc--CCceEEecCc------ccccHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCchHHHHHHH
Confidence 457889998888875 8999997432 5799999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh----h-c--cCCCCCCCccccccccccc--
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA----V-R--VGSWPNLPWLHTDSWVKNS-- 618 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~----~-~--~~~~~~~~~~~~~~~~~~~-- 618 (2280)
+|.+++|+++|.--|..-..+ |....+.+.++.+|.+...... + + ....+.+..+....-....
T Consensus 96 FALlrlGv~PVlALpsHr~~E-------i~~f~~~~e~~~~i~~~~~~gFd~~~~ar~~~a~~~tlr~v~v~ge~~~~~~ 168 (542)
T COG1021 96 FALLRLGVAPVLALPSHRASE-------LGAFASQIEAALLIVARQHSGFDYRPFARELVAKHPTLRHVIVAGEAEHPSV 168 (542)
T ss_pred HHHHHcCcchhhccchhhHHH-------HHHHHHhhcchheeechhhcccCcHHHHHHHHhhCCcceEEEEccCCCCcch
Confidence 999999999987766543333 7788888888888876543210 0 0 1112222222211110000
Q ss_pred -c---ccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH-
Q 037878 619 -K---NLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG- 693 (2280)
Q Consensus 619 -~---~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~- 693 (2280)
. ........+.++.+++++||...+-||||+||-+..||.....+++...+.+++++.+++++.+|..|.+.+.+
T Consensus 169 ~~~~~~~~a~~~~~a~~~~~~~vA~fqLSGGTTGtPKLIPRtH~DY~Ysv~aSaEiC~~~~~tvyL~~LP~AHNfplssP 248 (542)
T COG1021 169 LEAALCHPAGLFTPAPPADAGEVAFFQLSGGTTGTPKLIPRTHNDYYYSVRASAEICGFDQQTVYLCALPAAHNFPLSSP 248 (542)
T ss_pred hhhhhhCccccCCcCCCCCCCceEEEEecCCCCCCCccccccccceeeeeeehhhhhCcCccceEEEecccccCCCCCCc
Confidence 0 00111122345667889999999999999999999999999999999999999999999999999999886533
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
..+..++.|+++|+.+. .+|.....+|+++++|+...+|.+...+++..+... .+|+|||.+-+||+.+++
T Consensus 249 G~LGv~~agG~VVla~~----psp~~~F~lIerh~Vt~tALVPpla~LWlqa~e~~~-----~~LsSLrllQVGGarl~~ 319 (542)
T COG1021 249 GALGVFLAGGTVVLAPD----PSPELCFPLIERHGVTVTALVPPLASLWLQAAEWER-----ADLSSLRLLQVGGARLSA 319 (542)
T ss_pred chhheeeeccEEEECCC----CCHHHHHHHHHHhccceEEeccHHHHHHHHhhhccc-----CCchheeEEeecCcccCH
Confidence 57888999999988653 388999999999999999999988888877665543 789999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCc-eeecCCCceeeccccCCC-CCceEEEEcCCCCcccCC
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKP-IILDWQGRVCCGYVDQND-PDVDIRIVNPETSEEIGE 851 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~-~~~~~~g~~~~g~vG~p~-pg~~v~Ivd~~~~~~~~p 851 (2280)
++.+++...+ +|.+-+.+||.|--+.-+ ..++.+ ..+ .+-|+|+ |.-+++|+|.++ +.++
T Consensus 320 ~~Arrv~~~l------gC~LQQVFGMAEGLvnyT--RLDDp~E~i~--------~TQGrPlsP~DEvrvvD~dg--~pv~ 381 (542)
T COG1021 320 TLARRVPAVL------GCQLQQVFGMAEGLVNYT--RLDDPPEIII--------HTQGRPLSPDDEVRVVDADG--NPVA 381 (542)
T ss_pred HHHhhchhhh------CchHHHHhhhhhhhhccc--ccCCchHhee--------ecCCCcCCCcceeEEecCCC--CCCC
Confidence 9999998875 789999999999665433 222222 222 3345555 788999999886 3457
Q ss_pred CCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHH
Q 037878 852 PGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEK 930 (2280)
Q Consensus 852 ~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~ 930 (2280)
+||+|||..+||...+|||+-|+.++.+|.+ +|+|||||+++++ ||+|.+.||.||||+.+|++|-.+|||+
T Consensus 382 pGE~G~LltRGPYTirGYyrap~HNa~aF~a-------~GFYrsGD~V~~~~dGyl~V~GR~KDQINRgGEKIAAeEvEn 454 (542)
T COG1021 382 PGEVGELLTRGPYTIRGYYRAPEHNARAFDA-------DGFYRSGDLVRRDPDGYLVVEGRVKDQINRGGEKIAAEEVEN 454 (542)
T ss_pred CCCcceeeecCCeeeeeeccCchhhhhccCc-------CCceecCceeEecCCceEEEEeeehhhhccccchhhHHHHHH
Confidence 9999999999999999999999999999976 5999999999997 9999999999999999999999999999
Q ss_pred HHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecC
Q 037878 931 TVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKP 1010 (2280)
Q Consensus 931 ~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~ 1010 (2280)
.|..||.|.+ |++|+.+|+.+|++ ..+++++. +......++..+++++-...+++|-. +..+
T Consensus 455 ~LL~HP~V~~---AAlVampDelLGEk---------sCAfiv~~---~~~~~~~qlr~~L~~~GlAa~K~PDr---ie~v 516 (542)
T COG1021 455 LLLRHPAVHD---AALVAMPDELLGEK---------SCAFIVVK---EPPLRAAQLRRFLRERGLAAFKLPDR---IEFV 516 (542)
T ss_pred HHhhCchhhh---hhhhcCchhhcCcc---------eeEEEEec---CCCCCHHHHHHHHHHcchhhhcCCcc---eeec
Confidence 9999999976 99999999988753 34444432 22233457777777776666777643 4445
Q ss_pred CCccCCCCcccchHHHHHHhhc
Q 037878 1011 RTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1011 ~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+.+|+|+-||||||+|++++..
T Consensus 517 ~~~P~T~VGKIdKk~Lr~~l~~ 538 (542)
T COG1021 517 DSLPLTAVGKIDKKALRRRLAS 538 (542)
T ss_pred ccCCCcccccccHHHHHHHhhh
Confidence 9999999999999999988654
No 49
>PLN02574 4-coumarate--CoA ligase-like
Probab=100.00 E-value=1e-53 Score=576.82 Aligned_cols=485 Identities=23% Similarity=0.327 Sum_probs=373.3
Q ss_pred cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCC
Q 037878 484 TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLT-SRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLP 562 (2280)
Q Consensus 484 ~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~-~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~ 562 (2280)
.|+++|+...+ ++ .++||+||+++++++|+.|++ . |+++||+|+++++|+.++++++|||+++|++++|++|
T Consensus 52 ~~~~~a~~~~~-~~---~~~Ty~el~~~~~~lA~~L~~~~---G~~~gd~V~i~~~n~~~~~~~~la~~~~G~v~v~l~p 124 (560)
T PLN02574 52 HNGDTALIDSS-TG---FSISYSELQPLVKSMAAGLYHVM---GVRQGDVVLLLLPNSVYFPVIFLAVLSLGGIVTTMNP 124 (560)
T ss_pred cCCCCEEEECC-CC---CcccHHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCcchHHHHHHHHHHhCeEEeCcCc
Confidence 47888887432 12 368999999999999999998 7 8999999999999999999999999999999999999
Q ss_pred CCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccc---------ccccccc--cccccccCC
Q 037878 563 PDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWV---------KNSKNLL--AENVVCFTE 631 (2280)
Q Consensus 563 ~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~--~~~~~~~~~ 631 (2280)
..+.++ +.++++++++++++++.+....+.... ...+..+... ....... .........
T Consensus 125 ~~~~~~-------l~~~l~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (560)
T PLN02574 125 SSSLGE-------IKKRVVDCSVGLAFTSPENVEKLSPLG---VPVIGVPENYDFDSKRIEFPKFYELIKEDFDFVPKPV 194 (560)
T ss_pred ccCHHH-------HHHHHHhcCCEEEEECHHHHHHHHhcC---CcEEecCcccccccCccCcccHHHHhhcCCcccccCC
Confidence 998887 888999999999999865443332111 1111110000 0000000 001111223
Q ss_pred CCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH----HcC-CCCCcEEEEEcCchhhhhHHHHHHHHHHccceEE
Q 037878 632 SQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK----RYK-STSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAI 706 (2280)
Q Consensus 632 ~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~----~~~-~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~v 706 (2280)
..++++++|+|||||||.||||++||+++.+.+..... .+. ...+++++.++|++|.+++...++.++..|++++
T Consensus 195 ~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~~~~~~~l~~G~~~v 274 (560)
T PLN02574 195 IKQDDVAAIMYSSGTTGASKGVVLTHRNLIAMVELFVRFEASQYEYPGSDNVYLAALPMFHIYGLSLFVVGLLSLGSTIV 274 (560)
T ss_pred CCcCCEEEEEcCCCccCCCcEEEEeHHHHHHHHHHHHhccccccccCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEE
Confidence 46789999999999999999999999999887765543 122 2357889999999999998777788888999988
Q ss_pred EeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCC
Q 037878 707 LFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPF 786 (2280)
Q Consensus 707 l~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~ 786 (2280)
+.+. .++..+++.++++++|++..+|.++..+.+..... ...+++++|.+++||++++++++++|.+.+
T Consensus 275 ~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~----~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~--- 343 (560)
T PLN02574 275 VMRR----FDASDMVKVIDRFKVTHFPVVPPILMALTKKAKGV----CGEVLKSLKQVSCGAAPLSGKFIQDFVQTL--- 343 (560)
T ss_pred EecC----CCHHHHHHHHHHcCCeEEecCCHHHHHHHhCcccc----ccCccccceEEEEecccCCHHHHHHHHHHC---
Confidence 8753 38999999999999999999999998887543221 125688999999999999999999998875
Q ss_pred CCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcc
Q 037878 787 GLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAG 866 (2280)
Q Consensus 787 g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~ 866 (2280)
+++.+++.||+||++.+++....... ....+++|+|+|+++++|+|++++. .++.|+.|||+|+|++++
T Consensus 344 --~~~~v~~~YG~tE~~~~~~~~~~~~~--------~~~~~~vG~~~~~~~v~i~d~~~g~-~~~~g~~Gei~v~g~~~~ 412 (560)
T PLN02574 344 --PHVDFIQGYGMTESTAVGTRGFNTEK--------LSKYSSVGLLAPNMQAKVVDWSTGC-LLPPGNCGELWIQGPGVM 412 (560)
T ss_pred --CCCcEEecccccccCceeecCCCccc--------cCCCCceeeeCCCcEEEEEeCCCCc-CCCCCCCeEEEEECcchh
Confidence 46789999999999866543221111 1124678999999999999976554 457999999999999999
Q ss_pred cccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeE
Q 037878 867 IGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCA 945 (2280)
Q Consensus 867 ~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aa 945 (2280)
.||+++|+.|++.|.. +|||+|||+|+++ ||.++++||+||+||++|+||+|.|||++|.+||+|.+ ++
T Consensus 413 ~GY~~~~~~t~~~~~~-------~g~~~TGDlg~~~~~G~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~V~~---~~ 482 (560)
T PLN02574 413 KGYLNNPKATQSTIDK-------DGWLRTGDIAYFDEDGYLYIVDRLKEIIKYKGFQIAPADLEAVLISHPEIID---AA 482 (560)
T ss_pred hhhcCChhHhhhhccC-------CCCcccceEEEEECCCeEEEEecchhheEECCEEECHHHHHHHHHhCCCcce---EE
Confidence 9999999999988853 4899999999997 99999999999999999999999999999999999975 88
Q ss_pred EEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchH
Q 037878 946 VIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRF 1024 (2280)
Q Consensus 946 Vv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~ 1024 (2280)
|++++++..+ +....+++ ..++.. ..+++.+.+++++.. ++.| ..+..+++||+|++|||+|+
T Consensus 483 v~~~~~~~~g----------~~~~a~v~--~~~~~~~~~~~l~~~~~~~l~~-~~~p---~~v~~v~~iP~t~~GKi~r~ 546 (560)
T PLN02574 483 VTAVPDKECG----------EIPVAFVV--RRQGSTLSQEAVINYVAKQVAP-YKKV---RKVVFVQSIPKSPAGKILRR 546 (560)
T ss_pred EEccccCCCC----------cceEEEEE--eCCCCCCCHHHHHHHHHHhccC-cccC---cEEEEeeccCCCCcchhhHH
Confidence 8888765322 22222222 222222 235667777776665 3333 34445589999999999999
Q ss_pred HHHHHhhcC
Q 037878 1025 ECLKQFVDG 1033 (2280)
Q Consensus 1025 ~L~~~~~~~ 1033 (2280)
+|++.+.+.
T Consensus 547 ~L~~~~~~~ 555 (560)
T PLN02574 547 ELKRSLTNS 555 (560)
T ss_pred HHHHHHhhc
Confidence 999887543
No 50
>PLN02246 4-coumarate--CoA ligase
Probab=100.00 E-value=2.1e-53 Score=572.01 Aligned_cols=506 Identities=24% Similarity=0.317 Sum_probs=387.4
Q ss_pred CCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhH
Q 037878 464 EFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDF 543 (2280)
Q Consensus 464 ~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~ 543 (2280)
.+++..++.+++..++.+. |+++|+...+ ++ +++||.||.++++++|+.|.+. |+++||+|+++++|+.++
T Consensus 18 ~~~~~~~~~~~l~~~~~~~--~~~~a~~~~~-~~---~~~ty~el~~~~~~la~~L~~~---g~~~gd~V~i~~~~~~~~ 88 (537)
T PLN02246 18 YIPNHLPLHDYCFERLSEF--SDRPCLIDGA-TG---RVYTYADVELLSRRVAAGLHKL---GIRQGDVVMLLLPNCPEF 88 (537)
T ss_pred CCCCCCcHHHHHHHHHHhC--CCCeEEEecC-CC---ceeeHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCChHH
Confidence 4566778999998877763 8899986432 22 5799999999999999999988 899999999999999999
Q ss_pred HHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCcccccccccc---cc
Q 037878 544 VDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHTDSWVKN---SK 619 (2280)
Q Consensus 544 ~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~ 619 (2280)
+++++||+++|++++|+++..+.++ +..+++.+++++++++......+.... ......+..+..... ..
T Consensus 89 ~~~~la~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 161 (537)
T PLN02246 89 VLAFLGASRRGAVTTTANPFYTPAE-------IAKQAKASGAKLIITQSCYVDKLKGLAEDDGVTVVTIDDPPEGCLHFS 161 (537)
T ss_pred HHHHHHHHHcCEEEecCCCCCCHHH-------HHHHHHhcCCcEEEEccchHHHHHHHhhcCCceEEEeCCCCCCceeHH
Confidence 9999999999999999999999887 889999999999999765543321110 011111111110000 00
Q ss_pred ccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCcEEEEEcCchhhhhHHH
Q 037878 620 NLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK----RYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 620 ~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
... .....+.....+++++|++|||||||.||||+++|+++...+..... .+++.++|++++.+|++|.+++..
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~ 241 (537)
T PLN02246 162 ELTQADENELPEVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVILCVLPMFHIYSLNS 241 (537)
T ss_pred HHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCceEEEeHHHHHHHHHHHhhccccccCCCCCcEEEEeechHHHHHHHH
Confidence 000 00111122346789999999999999999999999999887765433 467889999999999999999877
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
.++.++..|+++++.++ .++..+++.++++++|++..+|.++..+.+.... ...+++++|.+++||+++++
T Consensus 242 ~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-----~~~~~~~lr~~~~gg~~l~~ 312 (537)
T PLN02246 242 VLLCGLRVGAAILIMPK----FEIGALLELIQRHKVTIAPFVPPIVLAIAKSPVV-----EKYDLSSIRMVLSGAAPLGK 312 (537)
T ss_pred HHHHHHhcCCEEEEeCC----CCHHHHHHHHHHhCceEEEcchHHHHHHhcCccc-----cccCccceeEEEEecCcCCH
Confidence 88899999999998764 2789999999999999999999988877643221 12457899999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccC-CCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCC
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYG-QGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEP 852 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~-~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~ 852 (2280)
++.+.+.+.+ ++..+++.||+||++.+++.... ...+. ....+++|+|+++++++|+|++++. .++.
T Consensus 313 ~~~~~~~~~~-----~~~~~~~~YG~tE~~~~~~~~~~~~~~~~------~~~~~~~G~~~~~~~~~i~d~~~~~-~~~~ 380 (537)
T PLN02246 313 ELEDAFRAKL-----PNAVLGQGYGMTEAGPVLAMCLAFAKEPF------PVKSGSCGTVVRNAELKIVDPETGA-SLPR 380 (537)
T ss_pred HHHHHHHHHc-----CCCeEeccccccccCcccccccccCCCCc------cccCCccccccCCcEEEEecCCCCC-cCCC
Confidence 9999999875 46789999999999876543211 11110 1123678999999999999976554 4579
Q ss_pred CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 853 GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 853 G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
|+.|||+|+|++++.||+++|+.|+++|.. ++||+|||+|+++ ||.++|+||+||+||++|+||+|.|||++
T Consensus 381 g~~Gel~v~g~~~~~GY~~~~~~~~~~~~~-------~~~~~TGD~~~~~~~g~l~~~GR~dd~i~~~G~~i~~~eIE~~ 453 (537)
T PLN02246 381 NQPGEICIRGPQIMKGYLNDPEATANTIDK-------DGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAELEAL 453 (537)
T ss_pred CCceEEEEECCchhccccCCchhhhhcccC-------CCCeeecceEEEeCCCeEEEEecccceEEECCEEECcHHHHHH
Confidence 999999999999999999999999888743 4899999999997 99999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcceeEEEEecC
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTVASVKLIKP 1010 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~lv~~ 1010 (2280)
|.++|+|.+ |+|++.+++..+ .....++. ..++... ..++.+.+++++. ..+.|..++.+
T Consensus 454 l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v~--~~~~~~~~~~~l~~~l~~~l~----~~~~p~~i~~~ 514 (537)
T PLN02246 454 LISHPSIAD---AAVVPMKDEVAG----------EVPVAFVV--RSNGSEITEDEIKQFVAKQVV----FYKRIHKVFFV 514 (537)
T ss_pred HHhCCCeeE---EEEEcccCccCC----------ceeEEEEE--eCCCCCCCHHHHHHHHHhhCc----CccccceEEEe
Confidence 999999865 888887665322 22222222 2223222 2445555555444 33444455566
Q ss_pred CCccCCCCcccchHHHHHHhhc
Q 037878 1011 RTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1011 ~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
++||+|++||++|++|++++.+
T Consensus 515 ~~~P~t~~GKi~r~~L~~~~~~ 536 (537)
T PLN02246 515 DSIPKAPSGKILRKDLRAKLAA 536 (537)
T ss_pred ccCCCCCcchhhHHHHHHHHhc
Confidence 9999999999999999887643
No 51
>PTZ00342 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=2.4e-53 Score=574.68 Aligned_cols=444 Identities=17% Similarity=0.191 Sum_probs=342.1
Q ss_pred CCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCC-----------C
Q 037878 463 VEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPG-----------D 531 (2280)
Q Consensus 463 ~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~G-----------d 531 (2280)
.++....++.+++++.+++. |+++|+.+.+ +|..++.+||+||.++++++|++|.+....|+++| |
T Consensus 55 ~~~~~~~~l~~~l~~~~~~~--p~~~Al~~~~-~g~~~~~~Ty~el~~~v~~~A~~L~~~~~~Gv~~g~~~~~~~~g~~d 131 (746)
T PTZ00342 55 SSLYVYKHIMKLLLEKYKLN--NNKIAIVEHS-CGEPQNYITYGNFFKKVLSFSHSLNTYEGKGIPEKKYNEEQNNGKFK 131 (746)
T ss_pred ccccccchHHHHHHHHHhhc--CCceeEeccC-CCCCceeeeHHHHHHHHHHHHHHHHHHhhcCCCcCcccccccccccc
Confidence 45666789999999888774 8999997532 23334789999999999999999986201289998 9
Q ss_pred EEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCc-
Q 037878 532 RVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPW- 608 (2280)
Q Consensus 532 ~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~- 608 (2280)
+|+|+++|++||+++++||+++|++.||+++..+.+. +.++++++++++++++.+..+.+... ..+.+..
T Consensus 132 ~V~i~~~N~~ew~~~~lA~~~~Gav~Vpl~~~~~~~e-------l~~il~~s~~~~lv~~~~~~~~l~~~~~~~~~l~~i 204 (746)
T PTZ00342 132 LLGLYGSNSINWLVADLACMLSGVTTLVMHSKFSIDV-------IVDILNETKLEWLCLDLDLVEGLLERKNELPHLKKL 204 (746)
T ss_pred EEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHH-------HHHHHhcCCCCEEEEcHHHHHHHHHhhccCCCceEE
Confidence 9999999999999999999999999999999999888 89999999999999976543322210 1111111
Q ss_pred ccccccccc-------------------------------------------------------------cc--------
Q 037878 609 LHTDSWVKN-------------------------------------------------------------SK-------- 619 (2280)
Q Consensus 609 ~~~~~~~~~-------------------------------------------------------------~~-------- 619 (2280)
+..+..... ..
T Consensus 205 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~ 284 (746)
T PTZ00342 205 IILDTLIKSKEININKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEYDKEKLEKIKDLKEKAKKLGISIIL 284 (746)
T ss_pred EEECCCCcccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhHHHHHHhhcCCCEEEE
Confidence 111100000 00
Q ss_pred --ccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHc--CCCCCcEEEEEcCchhhhhHHH
Q 037878 620 --NLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRY--KSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 620 --~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~--~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
+.. ...........++|+|+|+|||||||.||||++||+|+++.+....... .....+++++++|++|++++..
T Consensus 285 ~~~~~~~~~~~~~~~~~~~dd~a~IiYTSGTTG~PKGVmlTH~nl~~~~~~~~~~~~~~~~~~d~~ls~LPL~Hi~~~~~ 364 (746)
T PTZ00342 285 FDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKPKGVMLSNKNLYNTVVPLCKHSIFKKYNPKTHLSYLPISHIYERVI 364 (746)
T ss_pred HHHHHhhcccCCCCCCCCccceEEEEEcCCCCCCCCEEEEccHHHHHHHHHHhhcccccCCCCCeEEEeCcHHHHHHHHH
Confidence 000 0000112245689999999999999999999999999998887654432 2335689999999999999864
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcc----cccc----------------
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESS----KDKV---------------- 753 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~----~~~~---------------- 753 (2280)
.+.+++.|+++++.+. ++..+++.+.++++|++.++|.+++.+.+..... ....
T Consensus 365 -~~~~l~~G~~i~~~~~-----~~~~l~~di~~~~pT~~~~VP~v~~~i~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~ 438 (746)
T PTZ00342 365 -AYLSFMLGGTINIWSK-----DINYFSKDIYNSKGNILAGVPKVFNRIYTNIMTEINNLPPLKRFLVKKILSLRKSNNN 438 (746)
T ss_pred -HHHHHHcCCEEEEeCC-----CHHHHHHHHHHhCCcEEEchHHHHHHHHHHHHHHHhhcCHHHHHHHHHHHHHHHHhhc
Confidence 5677899999888652 7889999999999999999999998887542211 0000
Q ss_pred -----------------cccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCce
Q 037878 754 -----------------RSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPI 816 (2280)
Q Consensus 754 -----------------~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~ 816 (2280)
...-.++||.+++||+++++++.++|...+ ++.+.++||+||++..++.....
T Consensus 439 ~~~~~~~~~~~~v~~kir~~lg~~lr~~~sGGapl~~~~~~~~~~~~------g~~i~~gYGlTEt~~~~~~~~~~---- 508 (746)
T PTZ00342 439 GGFSKFLEGITHISSKIKDKVNPNLEVILNGGGKLSPKIAEELSVLL------NVNYYQGYGLTETTGPIFVQHAD---- 508 (746)
T ss_pred CCcchHHHHHHHHHHHHHHhhCCCeEEEEEcCCCCCHHHHHHHHHhc------CCCEEEeeccCcccceeeeccCC----
Confidence 000126899999999999999999998764 56799999999998765543211
Q ss_pred eecCCCceeeccccCCC-CCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeec
Q 037878 817 ILDWQGRVCCGYVDQND-PDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRT 895 (2280)
Q Consensus 817 ~~~~~g~~~~g~vG~p~-pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrT 895 (2280)
....+++|+|+ |+++++|+|.++.... +.++.|||+|+||+++.|||++|+.|+++|.. +|||||
T Consensus 509 ------~~~~gsvG~p~~pg~e~ki~d~~~~~~~-~~~~~GEl~vrGp~v~~GY~~~pe~T~~~f~~-------dGW~~T 574 (746)
T PTZ00342 509 ------DNNTESIGGPISPNTKYKVRTWETYKAT-DTLPKGELLIKSDSIFSGYFLEKEQTKNAFTE-------DGYFKT 574 (746)
T ss_pred ------CCCcccccCcCCCcEEEEEecccccccC-CCCCceEEEEecCcccccccCChhhhhhhcCc-------CCcccC
Confidence 12357899998 9999999985433222 34567999999999999999999999999964 489999
Q ss_pred CcEEEEE-CCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCcCCceeEEEec
Q 037878 896 GDLGRII-DGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHIRPGCCAVIGV 949 (2280)
Q Consensus 896 GDlgr~~-dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~ 949 (2280)
||+|+++ ||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+ |+|+|.
T Consensus 575 GDig~~d~dG~l~i~gR~kdlIkls~Ge~I~p~eIE~~l~~~p~V~~---~~VvG~ 627 (746)
T PTZ00342 575 GDIVQINKNGSLTFLDRSKGLVKLSQGEYIETDMLNNLYSQISFINF---CVVYGD 627 (746)
T ss_pred CcEEEECCCCeEEEEccCCCeEEeCCCEEEchHHHHHHHhcCCCccE---EEEEcc
Confidence 9999997 9999999999999997 7999999999999999999975 888874
No 52
>PRK05850 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.5e-53 Score=574.12 Aligned_cols=528 Identities=31% Similarity=0.541 Sum_probs=380.5
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCC---ceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEG---VAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g---~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
++.+++++++.. +|+++|+.+.+.++ ...+++||+||.++++++|+.|.+. | ++||+|+++++|+++++++
T Consensus 2 s~~~~l~~~a~~--~p~~~a~~~~~~~~~~~~~~~~lty~eL~~~v~~~A~~L~~~---g-~~gd~V~l~~~n~~~~~~~ 75 (578)
T PRK05850 2 SVPSLLRERASL--QPDDAAFTFIDYEQDPAGVAETLTWSQLYRRTLNVAEELRRH---G-STGDRAVILAPQGLEYIVA 75 (578)
T ss_pred cHHHHHHHHHhc--CCCceEEEEEccCCCCCCceeeecHHHHHHHHHHHHHHHHHh---C-CCCCEEEEEcCCcccHHHH
Confidence 567788888876 48999998754211 1136899999999999999999988 7 6899999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCC---ccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC----CCCCCC-ccccccccccc
Q 037878 547 FFGCMRAKVLPVPVLPPD---PLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG----SWPNLP-WLHTDSWVKNS 618 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~---p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~----~~~~~~-~~~~~~~~~~~ 618 (2280)
+|||+++|+++||+++.. +.++ +.++++++++++++++......+... ...... ....+.. .
T Consensus 76 ~lA~~~~G~v~vpl~~~~~~~~~~~-------l~~~l~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-- 145 (578)
T PRK05850 76 FLGALQAGLIAVPLSVPQGGAHDER-------VSAVLRDTSPSVVLTTSAVVDDVTEYVAPQPGQSAPPVIEVDLL-D-- 145 (578)
T ss_pred HHHHHHcCceEEecCCCCccchHHH-------HHHHHHhcCCCEEEEcHHHHHHHHHHHhhcccccccceEeeccc-c--
Confidence 999999999999999754 3444 88999999999999987654433210 000000 1111110 0
Q ss_pred cccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHc-C-----CCCCcEEEEEcCchhhhhHH
Q 037878 619 KNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRY-K-----STSKTVLVSWLPQYHDMGLI 692 (2280)
Q Consensus 619 ~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~-~-----~~~~d~~l~~~pl~h~~gl~ 692 (2280)
.............++|+++|+|||||||.||||+++|+++.+.+......+ . ...++++++++|++|+++++
T Consensus 146 --~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~g~~ 223 (578)
T PRK05850 146 --LDSPRGSDARPRDLPSTAYLQYTSGSTRTPAGVMVSHRNVIANFEQLMSDYFGDTGGVPPPDTTVVSWLPFYHDMGLV 223 (578)
T ss_pred --cccCCccccCCCCCCCeEEEEeCCCCCCCCceEEEeHHHHHHHHHHHHHhhccccccCCCCcceEEEECCCCCCchhH
Confidence 000000112234678999999999999999999999999988776654432 2 35678999999999999998
Q ss_pred HHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCC
Q 037878 693 GGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVR 772 (2280)
Q Consensus 693 ~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~ 772 (2280)
..++.+++.|+++++.++..+..+|..|++.++++++++...++..+..+....... .....+++++|.+++||++++
T Consensus 224 ~~~~~~l~~G~~~~~~~~~~~~~~p~~~~~~i~~~~~~~~~~p~~~~~~~~~~~~~~--~~~~~~~~~lr~~~~gg~~~~ 301 (578)
T PRK05850 224 LGVCAPILGGCPAVLTSPVAFLQRPARWMQLLASNPHAFSAAPNFAFELAVRKTSDD--DMAGLDLGGVLGIISGSERVH 301 (578)
T ss_pred HHHHHHHhcCCcEEEeCHHHHHHCHHHHHHHHHHcCCeEEeCCcHHHHHHHHhcchh--hhcCcchhhheeEEECcCCCC
Confidence 889999999999999876555568999999999999998766665555444322111 112246789999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceee--c----CCCc---------eeeccccCCCCCce
Q 037878 773 QTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIIL--D----WQGR---------VCCGYVDQNDPDVD 837 (2280)
Q Consensus 773 ~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~--~----~~g~---------~~~g~vG~p~pg~~ 837 (2280)
+++.++|.+.++..|+++..+.+.||+||++..++.......+... + ..|. .....+|.|. +.+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~g~p~-~~~ 380 (578)
T PRK05850 302 PATLKRFADRFAPFNLRETAIRPSYGLAEATVYVATREPGQPPESVRFDYEKLSAGHAKRCETGGGTPLVSYGSPR-SPT 380 (578)
T ss_pred HHHHHHHHHHHHhcCcCcccccCccchhhhhhheeccCCCCCceEEEECHHHHhCCceEecCCCCCceEEeccCCC-CCE
Confidence 9999999998876666677899999999987655432211110000 0 0010 1122456664 689
Q ss_pred EEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccC----CCCCceeecCcEEEEECCeEEEEecCC
Q 037878 838 IRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQN----NRGRKYTRTGDLGRIIDGKFFITGRIK 913 (2280)
Q Consensus 838 v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~----~~~~~~yrTGDlgr~~dG~l~~~GR~d 913 (2280)
++|+|++++.. ++.|+.|||+|+|++++.||+++|+.|+++|..+... ...++||+|||+|+++||+++|+||+|
T Consensus 381 ~~ivd~~~~~~-~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~~~~~~~~~~~~~~w~~TGDl~~~~~G~l~~~GR~~ 459 (578)
T PRK05850 381 VRIVDPDTCIE-CPAGTVGEIWVHGDNVAAGYWQKPEETERTFGATLVDPSPGTPEGPWLRTGDLGFISEGELFIVGRIK 459 (578)
T ss_pred EEEEcCCCCcC-CCCCCEEEEEEecCcccccccCChhhhHHHhhcccccccccCCCCCeeeccceeeEECCEEEEEcccc
Confidence 99999775544 5799999999999999999999999999999642211 123579999999999999999999999
Q ss_pred CeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC-------HHH
Q 037878 914 DLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-------KDV 986 (2280)
Q Consensus 914 d~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-------~~l 986 (2280)
|+||++|+||+|.|||++|.+||.+. ++|++++++ .+ +.+.+++.. .++...+ .++
T Consensus 460 d~i~~~G~~i~p~eIE~~l~~~~~~~----~~v~~v~~~-~~----------~~~~a~v~~--~~~~~~~~~~~~~~~~l 522 (578)
T PRK05850 460 DLLIVDGRNHYPDDIEATIQEITGGR----VAAISVPDD-GT----------EKLVAIIEL--KKRGDSDEEAMDRLRTV 522 (578)
T ss_pred cEEEECCeecCHHHHHHHHHHhcCCc----EEEEEecCC-Cc----------eEEEEEEEe--ccccCcchhhhhhHHHH
Confidence 99999999999999999999998752 677877664 11 222222222 2222111 123
Q ss_pred HHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCCCC
Q 037878 987 IENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLN 1036 (2280)
Q Consensus 987 ~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~ 1036 (2280)
.+.+.+.+..........+.++..++||+|++|||+|++|+++|.+..+.
T Consensus 523 ~~~v~~~l~~~~~~~~~~~~~~~~~~iP~t~~GKi~R~~l~~~~~~~~~~ 572 (578)
T PRK05850 523 KREVTSAISKSHGLSVADLVLVAPGSIPITTSGKIRRAACVEQYRQDEFT 572 (578)
T ss_pred HHHHHHHHHHHhCCCceEEEEeCCCCcCCCCCchHHHHHHHHHHHcCCcc
Confidence 33444444432222223345555578999999999999999998776544
No 53
>PRK13295 cyclohexanecarboxylate-CoA ligase; Reviewed
Probab=100.00 E-value=4.5e-53 Score=569.80 Aligned_cols=500 Identities=23% Similarity=0.308 Sum_probs=385.6
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++.++. +|+++|+.+.+.+....+.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++|
T Consensus 24 ~~l~~~l~~~a~~--~p~~~A~~~~~~~~~~~~~~Ty~el~~~~~~~a~~L~~~---g~~~g~~Val~~~n~~e~~~~~l 98 (547)
T PRK13295 24 RTINDDLDACVAS--CPDKTAVTAVRLGTGAPRRFTYRELAALVDRVAVGLARL---GVGRGDVVSCQLPNWWEFTVLYL 98 (547)
T ss_pred CCHHHHHHHHHHH--CCCceEEEecCCCccccceeeHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCChHHHHHHH
Confidence 4788999888876 489999987543323347899999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch-----hhcc--CCCCCCCcc-ccc-----ccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS-----AVRV--GSWPNLPWL-HTD-----SWV 615 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~-----~~~~--~~~~~~~~~-~~~-----~~~ 615 (2280)
||+++|++++|+++..+.++ +.++++++++++++++..... .... ...+....+ ..+ ++.
T Consensus 99 a~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (547)
T PRK13295 99 ACSRIGAVLNPLMPIFRERE-------LSFMLKHAESKVLVVPKTFRGFDHAAMARRLRPELPALRHVVVVGGDGADSFE 171 (547)
T ss_pred HHHhcCcEEeccccccCHHH-------HHHHHHhcCceEEEEeccccCcchHHHHHHHhhhCCCcceEEEecCCCccCHH
Confidence 99999999999999999888 889999999999999765311 0000 001111100 000 000
Q ss_pred c---cc-ccc-cc-ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhh
Q 037878 616 K---NS-KNL-LA-ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDM 689 (2280)
Q Consensus 616 ~---~~-~~~-~~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 689 (2280)
. .. ... .. ..........++++++|+|||||||.||||+++|+++...+......+++.+++++++++|++|..
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~ 251 (547)
T PRK13295 172 ALLITPAWEQEPDAPAILARLRPGPDDVTQLIYTSGTTGEPKGVMHTANTLMANIVPYAERLGLGADDVILMASPMAHQT 251 (547)
T ss_pred HHhhCCccccccccccccccCCCCCcceeEEEeCCCCCCCCCEEEeccHHHHHHHHHHHHHhCCCCCCeEEEecCchhhh
Confidence 0 00 000 00 000111234678999999999999999999999999999988888888999999999999999999
Q ss_pred hHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecC
Q 037878 690 GLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAE 769 (2280)
Q Consensus 690 gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe 769 (2280)
+++..++.++..|+++++.+. .++..+++.++++++|++.++|.++..+....... ..++++||.+++||+
T Consensus 252 g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~-----~~~~~~l~~~~~~G~ 322 (547)
T PRK13295 252 GFMYGLMMPVMLGATAVLQDI----WDPARAAELIRTEGVTFTMASTPFLTDLTRAVKES-----GRPVSSLRTFLCAGA 322 (547)
T ss_pred hHHHHHHHHHHcCCeEEeCCC----CCHHHHHHHHHHcCCcEEEecHHHHHHHHhccccc-----CCCcccceEEEEecC
Confidence 988889999999999988652 38899999999999999999998888776543222 256789999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCccc
Q 037878 770 PVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEI 849 (2280)
Q Consensus 770 ~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~ 849 (2280)
++++++.+++.+.+ ++.++|.||+||++.+++....... ....+++|+|+++++++|+|+++ ..
T Consensus 323 ~l~~~~~~~~~~~~------~~~~~~~YG~TE~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~v~i~d~~~--~~ 386 (547)
T PRK13295 323 PIPGALVERARAAL------GAKIVSAWGMTENGAVTLTKLDDPD--------ERASTTDGCPLPGVEVRVVDADG--AP 386 (547)
T ss_pred CCCHHHHHHHHHHh------CCCeEEeccCCCCCCeeeccCCCcc--------hhccCccccccCCcEEEEECCCC--CC
Confidence 99999999998875 4679999999999876543321110 11235689999999999999875 34
Q ss_pred CCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHH
Q 037878 850 GEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADV 928 (2280)
Q Consensus 850 ~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EI 928 (2280)
++.|+.|||+|+|++++.||+++|+.|++. .+|||+|||+|+++ ||.+++.||+||+||++|+||+|.||
T Consensus 387 ~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~---------~~g~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~~I 457 (547)
T PRK13295 387 LPAGQIGRLQVRGCSNFGGYLKRPQLNGTD---------ADGWFDTGDLARIDADGYIRISGRSKDVIIRGGENIPVVEI 457 (547)
T ss_pred CCCCCCCeEEEEcCcccccccCCccccccC---------CCCCeecceEEEEcCCceEEEEeccCCeEEECCEEECHHHH
Confidence 579999999999999999999999988764 14799999999996 99999999999999999999999999
Q ss_pred HHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC-HHHHHHHHHHHHHhcCcceeEEEE
Q 037878 929 EKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-KDVIENIKTRVVEEHGVTVASVKL 1007 (2280)
Q Consensus 929 E~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~~~~~~l 1007 (2280)
|++|.++++|.+ ++|++++++..+ ..+.++++ ..++...+ .++.+.+++. .++..+.|..+
T Consensus 458 E~~l~~~~~v~~---~~v~~~~~~~~g----------~~~~~~v~--~~~~~~~~~~~l~~~~~~~---~l~~~~~P~~i 519 (547)
T PRK13295 458 EALLYRHPAIAQ---VAIVAYPDERLG----------ERACAFVV--PRPGQSLDFEEMVEFLKAQ---KVAKQYIPERL 519 (547)
T ss_pred HHHHHhCCCeee---EEEEeeecCCCC----------cEEEEEEE--eCCCCCCCHHHHHHHHHhc---cCccccCCcEE
Confidence 999999999875 888887765322 22222222 23232222 4455555542 23333344556
Q ss_pred ecCCCccCCCCcccchHHHHHHhhc
Q 037878 1008 IKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1008 v~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+.+++||+|.+||++|++|++++.+
T Consensus 520 ~~v~~lP~t~sgK~~r~~L~~~~~~ 544 (547)
T PRK13295 520 VVRDALPRTPSGKIQKFRLREMLRG 544 (547)
T ss_pred EEeccCCCCCCccccHHHHHHHHhc
Confidence 6669999999999999999887654
No 54
>PRK05852 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.7e-53 Score=566.16 Aligned_cols=509 Identities=22% Similarity=0.337 Sum_probs=389.1
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
-+...++.+++++++++ +|+++|+.+.++ .+.+||+||.++++++|+.|.+. |+++||+|+++++|+++++
T Consensus 12 ~~~~~~l~~~l~~~a~~--~p~~~ai~~~~~----~~~~Ty~~l~~~~~~~a~~L~~~---gv~~gd~V~i~~~n~~~~~ 82 (534)
T PRK05852 12 SDFGPRIADLVEVAATR--LPEAPALVVTAD----RIAISYRDLARLVDDLAGQLTRS---GLLPGDRVALRMGSNAEFV 82 (534)
T ss_pred hhhcccHHHHHHHHHHh--CCCCcEEEecCC----CCcccHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCcHHHH
Confidence 35567899999988876 489999876432 14799999999999999999988 9999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCc-ccc--cc------cc
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPW-LHT--DS------WV 615 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~~~--~~------~~ 615 (2280)
+++|||+++|++++|+++..+.++ +.+++++++++.++++................. +.. .. +.
T Consensus 83 ~~~lA~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (534)
T PRK05852 83 VALLAASRADLVVVPLDPALPIAE-------QRVRSQAAGARVVLIDADGPHDRAEPTTRWWPLTVNVGGDSGPSGGTLS 155 (534)
T ss_pred HHHHHHHHcCcEEeecCCCCCcHH-------HHHHHHhCCCCEEEEcCCCcchhccccccccceeeeecccccccccccc
Confidence 999999999999999999998887 889999999999998754221111000000000 000 00 00
Q ss_pred ccccccc-cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHH
Q 037878 616 KNSKNLL-AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 616 ~~~~~~~-~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
....... ...........++|.++|+|||||||.||||+++|+++.+.+......+++..+|++++++|++|..+++..
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~ 235 (534)
T PRK05852 156 VHLDAATEPTPATSTPEGLRPDDAMIMFTGGTTGLPKMVPWTHANIASSVRAIITGYRLSPRDATVAVMPLYHGHGLIAA 235 (534)
T ss_pred cccccccCCCccccccCCCCCCceEEEeCCCCCCCCcEEEecHHHHHHHHHHHHHHhCCCCcceEEEecCcchhHHHHHH
Confidence 0000000 000001111235788999999999999999999999999999888888899999999999999999999888
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHH
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQT 774 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~ 774 (2280)
++.++..|+++++.+...+ ++..+++.++++++|++..+|.++..+.+...... ...+++++|.+.++|++++++
T Consensus 236 ~~~~l~~g~~~~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~~~~~~lr~i~~~G~~~~~~ 310 (534)
T PRK05852 236 LLATLASGGAVLLPARGRF--SAHTFWDDIKAVGATWYTAVPTIHQILLERAATEP---SGRKPAALRFIRSCSAPLTAE 310 (534)
T ss_pred HHHHHhcCCeEEeCCCcCc--CHHHHHHHHHHcCCcEEEcChHHHHHHHhhccccc---ccccCCCeeEEEECCCCCCHH
Confidence 9999999999887554443 78899999999999999999999988876543221 113568999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCC
Q 037878 775 TVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGK 854 (2280)
Q Consensus 775 l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~ 854 (2280)
+.+++.+.+ +..+++.||+||++..++......... ........|.+|. .+|++++|+|+++ ..+++|+
T Consensus 311 ~~~~~~~~~------~~~v~~~YG~tE~~~~~~~~~~~~~~~--~~~~~~~~g~~g~-~~g~~~~i~d~~g--~~~~~g~ 379 (534)
T PRK05852 311 TAQALQTEF------AAPVVCAFGMTEATHQVTTTQIEGIGQ--TENPVVSTGLVGR-STGAQIRIVGSDG--LPLPAGA 379 (534)
T ss_pred HHHHHHHHh------CCChhhccCccccchhhhcCCcccccc--ccCcccccccCCC-CCCCeEEEECCCC--CCCCCCC
Confidence 999998875 467999999999987655322110000 0001112345555 6999999999876 3457999
Q ss_pred eeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHH
Q 037878 855 EGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVE 933 (2280)
Q Consensus 855 ~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~ 933 (2280)
.|||+|+|+.+++||+++|+.|++.|. ++||||||+++++ ||++++.||+||+||++|.+|+|.|||++|.
T Consensus 380 ~Gel~v~g~~v~~gY~~~~~~t~~~~~--------~g~~~TGD~~~~d~dG~l~~~gR~~d~i~~~G~~v~~~~iE~~l~ 451 (534)
T PRK05852 380 VGEVWLRGTTVVRGYLGDPTITAANFT--------DGWLRTGDLGSLSAAGDLSIRGRIKELINRGGEKISPERVEGVLA 451 (534)
T ss_pred ceEEEEecCcccchhcCCcccchhhhc--------CCCcccCceEEEeCCCcEEEEecchhhEEECCEEECHHHHHHHHH
Confidence 999999999999999999999999885 3799999999997 9999999999999999999999999999999
Q ss_pred hccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCC
Q 037878 934 SSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRT 1012 (2280)
Q Consensus 934 ~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~ 1012 (2280)
++|+|.+ |+|++++++..+ ..+..+++. .++. ....++.++++++|+. +++| ..++.+++
T Consensus 452 ~~~~V~~---~~v~g~~~~~~g----------~~~~~~vv~--~~~~~~~~~~i~~~~~~~l~~-~~~P---~~i~~v~~ 512 (534)
T PRK05852 452 SHPNVME---AAVFGVPDQLYG----------EAVAAVIVP--RESAPPTAEELVQFCRERLAA-FEIP---ASFQEASG 512 (534)
T ss_pred hCCCeee---EEEEecCCcCcC----------ceEEEEEEE--CCCCCCCHHHHHHHHHHhccc-ccCC---eEEEEhhh
Confidence 9999975 899988765322 222233322 2222 2335677777777654 5444 34556699
Q ss_pred ccCCCCcccchHHHHHHhhc
Q 037878 1013 MSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1013 lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
||+|++||++|++|+++|.+
T Consensus 513 iP~t~~GKi~r~~L~~~~~~ 532 (534)
T PRK05852 513 LPHTAKGSLDRRAVAEQFGH 532 (534)
T ss_pred cCCCCCccccHHHHHHHhcc
Confidence 99999999999999998743
No 55
>PRK09192 acyl-CoA synthetase; Validated
Probab=100.00 E-value=7.4e-53 Score=570.85 Aligned_cols=536 Identities=30% Similarity=0.462 Sum_probs=399.9
Q ss_pred CCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHh
Q 037878 463 VEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLD 542 (2280)
Q Consensus 463 ~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e 542 (2280)
.++++..++.++++..++.. ++..+ .+.+++..+.+||.||+++++++|++|+++ |+++||+|+++++|+++
T Consensus 15 ~~~~~~~~~~~~~~~~~~~~--~~~~~---~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~---gi~~gd~V~l~~~n~~~ 86 (579)
T PRK09192 15 RRYADFPTLVEALDYAALGE--AGMNF---YDRRGQLEEALPYQTLRARAEAGARRLLAL---GLKPGDRVALIAETDGD 86 (579)
T ss_pred ccccchhhHHHHHHHhhccC--CceEE---EecCCCEEEEecHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCchh
Confidence 34777889999999888763 43333 243444457899999999999999999988 99999999999999999
Q ss_pred HHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCccccccccccccc
Q 037878 543 FVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLHTDSWVKNSKN 620 (2280)
Q Consensus 543 ~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 620 (2280)
++++++||+++|++++|+++..+........+++..+++.+++++++++......+... ............+...
T Consensus 87 ~~~~~lA~~~~G~~~v~i~~~~~~~~~~~~~~~l~~~i~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 163 (579)
T PRK09192 87 FVEAFFACQYAGLVPVPLPLPMGFGGRESYIAQLRGMLASAQPAAIITPDELLPWVNEATHGNPLLHVLSHAWFKAL--- 163 (579)
T ss_pred HHHHHHHHHHcCCeeEeccCCcccccchHHHHHHHHHHHhcCCCEEEeChHHHHHHHHhhccccccceeehhhhccc---
Confidence 99999999999999999987654322112234588999999999999987654332211 0011111111111100
Q ss_pred cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH-HcCCCCCcEEEEEcCchhhhhHHHHHHHHH
Q 037878 621 LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK-RYKSTSKTVLVSWLPQYHDMGLIGGLFTAM 699 (2280)
Q Consensus 621 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~-~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L 699 (2280)
...........+++++||+|||||||.||||+++|+++...+..... .+++.++|+++.++|++|+++++..++.++
T Consensus 164 --~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l 241 (579)
T PRK09192 164 --PEADVALPRPTPDDIAYLQYSSGSTRFPRGVIITHRALMANLRAISHDGLKVRPGDRCVSWLPFYHDMGLVGFLLTPV 241 (579)
T ss_pred --CCCccccCCCCCCCeEEEEecCCCCCCCceEEeeHHHHHHHHHHHHhhcccCCCCCeEEEeCCCCCcchhHHHHHHHH
Confidence 00111122356789999999999999999999999999998887777 788999999999999999999988888889
Q ss_pred HccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHH
Q 037878 700 VGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRF 779 (2280)
Q Consensus 700 ~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~ 779 (2280)
..|+++++.+...+..+|..+++.+.++++++...+|..+..+....... .....+++++|.+++||+++++++.++|
T Consensus 242 ~~g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~~~~~~l~~~~~~~~--~~~~~~l~~lr~~~~gG~~l~~~~~~~~ 319 (579)
T PRK09192 242 ATQLSVDYLPTRDFARRPLQWLDLISRNRGTISYSPPFGYELCARRVNSK--DLAELDLSCWRVAGIGADMIRPDVLHQF 319 (579)
T ss_pred HhCCeeEeeCHHHHHHCHHHHHHHHHhcCcEEEeCCcHHHHHHHHhhccc--cccccchhhhheeEecCccCCHHHHHHH
Confidence 99999877765555558999999999999999888877666655432211 1123568899999999999999999999
Q ss_pred HHHhcCCCCCCcccccccCccccccceecccCCCCce--eec----------------CCCceeeccccCCCCCceEEEE
Q 037878 780 VELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPI--ILD----------------WQGRVCCGYVDQNDPDVDIRIV 841 (2280)
Q Consensus 780 ~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~--~~~----------------~~g~~~~g~vG~p~pg~~v~Iv 841 (2280)
.+.+...|.+...+++.||+||++..++......... ..+ .......+++|.|+|+++++|+
T Consensus 320 ~~~~~~~g~~~~~~~~~yG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~~~p~~~v~i~ 399 (579)
T PRK09192 320 AEAFAPAGFDDKAFMPSYGLAEATLAVSFSPLGSGIVVEEVDRDRLEYQGKAVAPGAETRRVRTFVNCGKALPGHEIEIR 399 (579)
T ss_pred HHHHHhcCCChhhcccccccccceeEEeccCCCCCceEEEEcHHHhcCCceeeccCCCCccceeEeecCCcCCCcEEEEE
Confidence 9887544444456999999999987665432211000 000 0001124678999999999999
Q ss_pred cCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCe
Q 037878 842 NPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGR 921 (2280)
Q Consensus 842 d~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~ 921 (2280)
|+++ ..++.|+.|||+|+|+++++||+++ +.+.+.|.. ++||+|||+|+++||+++|+||+||+||++|+
T Consensus 400 d~~~--~~~~~g~~Gel~i~g~~~~~gY~~~-~~~~~~~~~-------dgw~~TGDlg~~~~G~l~~~GR~dd~i~~~G~ 469 (579)
T PRK09192 400 NEAG--MPLPERVVGHICVRGPSLMSGYFRD-EESQDVLAA-------DGWLDTGDLGYLLDGYLYITGRAKDLIIINGR 469 (579)
T ss_pred CCCC--CCCCCCCEEEEEecCCchhhhhcCC-ccccccccC-------CceeeccceeeEECCEEEEEeccccEEEECCC
Confidence 9774 3457899999999999999999999 566666643 48999999999999999999999999999999
Q ss_pred eechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCc
Q 037878 922 NVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGV 1000 (2280)
Q Consensus 922 rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~ 1000 (2280)
||+|.|||++|++||+|.. ..|+|++++++. .. ..+++++..++. ...+++.+.+++.+...++.
T Consensus 470 ~v~p~eIE~~l~~~p~V~~-~~~~v~~~~~~~-----------~~--~~~~~v~~~~~~~~~~~~l~~~~~~~l~~~~~~ 535 (579)
T PRK09192 470 NIWPQDIEWIAEQEPELRS-GDAAAFSIAQEN-----------GE--KIVLLVQCRISDEERRGQLIHALAALVRSEFGV 535 (579)
T ss_pred ccCHHHHHHHHHhcCCccC-CcEEEEEeccCC-----------Ce--eEEEEEEecCCChHHHHHHHHHHHHHHHHHhCC
Confidence 9999999999999999962 247788776541 11 222222222222 22356788888888766666
Q ss_pred ceeEEEEecCCCccCCCCcccchHHHHHHhhcCCCCCC
Q 037878 1001 TVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLNTV 1038 (2280)
Q Consensus 1001 ~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~~l 1038 (2280)
+.. +.++..++||+|++||++|++|++++.++.+..+
T Consensus 536 ~~~-i~~~~~~~lP~t~~GKv~R~~l~~~~~~~~~~~~ 572 (579)
T PRK09192 536 EAA-VELVPPHSLPRTSSGKLSRAKAKKRYLSGAFASL 572 (579)
T ss_pred Cce-EEEeCCCCcCCCCCcchhHHHHHHHHHcCCCCcc
Confidence 543 4555557899999999999999999988876543
No 56
>PRK08314 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=6.6e-53 Score=569.38 Aligned_cols=498 Identities=26% Similarity=0.346 Sum_probs=386.9
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.+++.+... |+++|+.+.+ +.+||+||.++++++|+.|.+.. |+++||+|+++++|++++++++
T Consensus 9 ~~tl~~~l~~~a~~~--~~~~a~~~~~------~~~Ty~~l~~~v~~~a~~L~~~~--g~~~g~~V~i~~~~~~~~~~~~ 78 (546)
T PRK08314 9 ETSLFHNLEVSARRY--PDKTAIVFYG------RAISYRELLEEAERLAGYLQQEC--GVRKGDRVLLYMQNSPQFVIAY 78 (546)
T ss_pred CCCHHHHHHHHHHHc--CCCcceeecC------ceecHHHHHHHHHHHHHHHHHhh--CCCCCCEEEEECCCChHHHHHH
Confidence 557888888887764 8899988653 47999999999999999998752 6999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCC-CCCCcccc---ccc---------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSW-PNLPWLHT---DSW--------- 614 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~-~~~~~~~~---~~~--------- 614 (2280)
|||+++|++++|+++..+.++ +.+++++++++.++++......+..... .....+.. .+.
T Consensus 79 lA~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (546)
T PRK08314 79 YAILRANAVVVPVNPMNREEE-------LAHYVTDSGARVAIVGSELAPKVAPAVGNLRLRHVIVAQYSDYLPAEPEIAV 151 (546)
T ss_pred HHHHHcCcEEeecCcCcCHHH-------HHHHHHhCCCeEEEEccchhhhHHHHhhccCcceEEEecchhhcccccccCc
Confidence 999999999999999998887 8899999999999998765432211000 00000000 000
Q ss_pred ---cc---------------cccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCC
Q 037878 615 ---VK---------------NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSK 676 (2280)
Q Consensus 615 ---~~---------------~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~ 676 (2280)
.. .................++++|+|+|||||||.||||+++|++++..+......+++..+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~ 231 (546)
T PRK08314 152 PAWLRAEPPLQALAPGGVVAWKEALAAGLAPPPHTAGPDDLAVLPYTSGTTGVPKGCMHTHRTVMANAVGSVLWSNSTPE 231 (546)
T ss_pred ccccccccccccccccccccHHHHhcccCCCCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCC
Confidence 00 000000000112233467899999999999999999999999999998888888889999
Q ss_pred cEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccccccccc
Q 037878 677 TVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSF 756 (2280)
Q Consensus 677 d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~ 756 (2280)
|++++++|++|.+++...++.++..|+++++.++ .++..+++.++++++|++.++|.++..++.... ....
T Consensus 232 d~~l~~~p~~~~~g~~~~~~~~l~~G~~i~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~ll~~~~-----~~~~ 302 (546)
T PRK08314 232 SVVLAVLPLFHVTGMVHSMNAPIYAGATVVLMPR----WDREAAARLIERYRVTHWTNIPTMVVDFLASPG-----LAER 302 (546)
T ss_pred ceEEEEcCchHHHHHHHHHHHHHHcCCeEEecCC----CCHHHHHHHHHHhcCceecccHHHHHHHHhCCC-----cccc
Confidence 9999999999999998889999999999998763 278899999999999999999998877764321 1224
Q ss_pred CCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCc
Q 037878 757 DLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDV 836 (2280)
Q Consensus 757 ~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~ 836 (2280)
+++++|.+++||+++++++.+++.+.+ +.++++.||+||++..++..... ....+++|.|++++
T Consensus 303 ~~~~l~~~~~gG~~~~~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~G~~~~g~ 366 (546)
T PRK08314 303 DLSSLRYIGGGGAAMPEAVAERLKELT------GLDYVEGYGLTETMAQTHSNPPD----------RPKLQCLGIPTFGV 366 (546)
T ss_pred CchhhheeeeccccCCHHHHHHHHHHc------CCcEEecccccccccceecCCCc----------CCCCCccCcccCCe
Confidence 678999999999999999999998864 46799999999998665432211 11236789999999
Q ss_pred eEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCe
Q 037878 837 DIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDL 915 (2280)
Q Consensus 837 ~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~ 915 (2280)
+++|+|++.+. .++.|+.|||+|+|++++.||+|+++.|++.|.. .++.+||+|||+|+++ +|.++++||+||+
T Consensus 367 ~~~i~d~~~~~-~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~f~~----~~~~~~~~TGDl~~~~~~g~l~~~GR~~d~ 441 (546)
T PRK08314 367 DARVIDPETLE-ELPPGEVGEIVVHGPQVFKGYWNRPEATAEAFIE----IDGKRFFRTGDLGRMDEEGYFFITDRLKRM 441 (546)
T ss_pred EEEEEeCCCCc-CCCCCCceEEEEECCchhccccCChhHhhhhhhh----cCCCceEecCCEEEEcCCCcEEEEecchhh
Confidence 99999976554 4479999999999999999999999999998864 2346799999999997 9999999999999
Q ss_pred EEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC--C-CCHHHHHHHHH
Q 037878 916 IIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK--P-VDKDVIENIKT 992 (2280)
Q Consensus 916 IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~--~-~~~~l~~~l~~ 992 (2280)
||++|+||+|.|||++|.++|+|.+ ++|++.+++..+ +...++++. .++. . ...++.+.+++
T Consensus 442 i~~~G~~v~~~eIE~~i~~~~~v~~---~~v~~~~~~~~~----------~~~~a~v~~--~~~~~~~~~~~~l~~~~~~ 506 (546)
T PRK08314 442 INASGFKVWPAEVENLLYKHPAIQE---ACVIATPDPRRG----------ETVKAVVVL--RPEARGKTTEEEIIAWARE 506 (546)
T ss_pred EEeCCEEECHHHHHHHHHhCcchhe---EEEEeCCCcccC----------ceeEEEEEE--CCCCCCCCCHHHHHHHHHH
Confidence 9999999999999999999999865 788887765322 222223322 2221 1 12456666666
Q ss_pred HHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 993 RVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 993 ~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
++.. ++ .|..++.+++||+|.|||++|++|++...
T Consensus 507 ~l~~-~~---~P~~~~~v~~iP~t~~GKv~r~~L~~~~~ 541 (546)
T PRK08314 507 HMAA-YK---YPRIVEFVDSLPKSGSGKILWRQLQEQEK 541 (546)
T ss_pred hccc-CC---CCcEEEEecCCCCCCccceeHHHHHHHHh
Confidence 6654 34 44455556999999999999999877643
No 57
>PRK08043 bifunctional acyl-[acyl carrier protein] synthetase/2-acylglycerophosphoethanolamine acyltransferase; Validated
Probab=100.00 E-value=3.5e-53 Score=585.86 Aligned_cols=495 Identities=19% Similarity=0.237 Sum_probs=369.5
Q ss_pred CCCHHHHHHhhccccccCC-ceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQK-KTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d-~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
..++.+++++.+++. |+ ++|+.. .+ .+++||+||.++++++|+.|.+. +++||+|+++++|++|++++
T Consensus 203 ~~t~~~~l~~~~~~~--p~~~~a~~~--~~---~~~~Ty~el~~~~~~lA~~L~~~----~~~gd~Val~~~n~~e~~~~ 271 (718)
T PRK08043 203 RETLYEALLSAQYRY--GAGKPCIED--VN---FTPDSYRKLLKKTLFVGRILEKY----SVEGERIGLMLPNATISAAV 271 (718)
T ss_pred CCCHHHHHHHHHHHh--CCCCcceEc--CC---CCcccHHHHHHHHHHHHHHHHHh----cCCCceEEEEcCCcHHHHHH
Confidence 457888888887764 65 567642 11 25799999999999999999875 59999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC----CCCCCCccccccccccc--cc
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG----SWPNLPWLHTDSWVKNS--KN 620 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~--~~ 620 (2280)
+|||+++|++++|+++..+.++ +.++++++++++++++.+........ ..+....+..++..... ..
T Consensus 272 ~lA~~~~G~v~vpl~~~~~~~~-------l~~~l~~s~~~~vi~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 344 (718)
T PRK08043 272 IFGASLRRRIPAMMNYTAGVKG-------LTSAITAAEIKTIFTSRQFLDKGKLWHLPEQLTQVRWVYLEDLKDDVTTAD 344 (718)
T ss_pred HHHHHHcCCcccccccCcCHHH-------HHHHHHHcCCcEEEEcHHHHhhccCCChhhhhccccEEEhhhhhhhcchhH
Confidence 9999999999999999998888 89999999999999976543321100 00111111111100000 00
Q ss_pred ------cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHH
Q 037878 621 ------LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 621 ------~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
.............++|+++|+|||||||.||||++||+|+.+.+......++++++|++++++|++|.+++...
T Consensus 345 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~Pl~h~~g~~~~ 424 (718)
T PRK08043 345 KLWIFAHLLMPRLAQVKQQPEDAALILFTSGSEGHPKGVVHSHKSLLANVEQIKTIADFTPNDRFMSALPLFHSFGLTVG 424 (718)
T ss_pred HHHHHHHHhCCccccCCCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhhCCCccCeEEEcCcchhhhhhHHH
Confidence 00000011123467999999999999999999999999999998888888889999999999999999998888
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHH
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQT 774 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~ 774 (2280)
++.++..|+++++.+. . .++..+.+.+.++++|++..+|+++..+.+.. ...++++||.+++|||+++++
T Consensus 425 ~~~~l~~G~~vv~~~~-~--~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~-------~~~~~~~lr~i~~gg~~l~~~ 494 (718)
T PRK08043 425 LFTPLLTGAEVFLYPS-P--LHYRIVPELVYDRNCTVLFGTSTFLGNYARFA-------NPYDFARLRYVVAGAEKLQES 494 (718)
T ss_pred HHHHHHcCCEEEEeCC-c--ccHHHHHHHHHhcCCeEEEchHHHHHHhhhhc-------CcccccceEEEEEeCccCCHH
Confidence 8999999999988753 1 25677889999999999999999887664321 125688999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCC
Q 037878 775 TVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGK 854 (2280)
Q Consensus 775 l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~ 854 (2280)
+.++|.+.+ ++.+++.||+||++.+++..... ....+++|+|+||++++|+|+++ .|+
T Consensus 495 ~~~~~~~~~------g~~l~~~YG~TE~~~~~~~~~~~----------~~~~~svG~p~pg~~~~i~d~~~------~~~ 552 (718)
T PRK08043 495 TKQLWQDKF------GLRILEGYGVTECAPVVSINVPM----------AAKPGTVGRILPGMDARLLSVPG------IEQ 552 (718)
T ss_pred HHHHHHHHc------CCCeecccCcccccceEEecCCc----------ccCCCCCCCcCCCCeeEEecCCC------CCC
Confidence 999998864 46799999999998766543211 11247899999999999999664 256
Q ss_pred eeEEEEcCCCcccccCC--CchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 855 EGEVWISSPSAGIGYWG--REELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 855 ~GEL~i~Gp~v~~GY~~--~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
.|||+++|++++.|||+ +|+.+...+.........+|||+|||+|+++ ||+++|+||+||+||++|+||+|.|||++
T Consensus 553 ~Gel~v~g~~v~~GY~~~e~~~~~~~~~~~~~~~~~~~gw~~TGDlg~~d~dG~l~i~GR~~d~I~~~G~~V~p~eIE~~ 632 (718)
T PRK08043 553 GGRLQLKGPNIMNGYLRVEKPGVLEVPTAENARGEMERGWYDTGDIVRFDEQGFVQIQGRAKRFAKIAGEMVSLEMVEQL 632 (718)
T ss_pred ceEEEEecCCccccccCCCCcccccccccccccccccCCeEecCCEEEEcCCCcEEEEecCCCeeEeCcEEcCHHHHHHH
Confidence 69999999999999998 4553222111000011135899999999997 99999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCC
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPR 1011 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~ 1011 (2280)
+.+++.+.+ ++|++.+++..++ ..+++.. ......+++.++++++..+.+++|. .+..++
T Consensus 633 l~~~~~~~~---~avv~~~~~~~ge------------~~v~~~~--~~~~~~~~l~~~~~~~~l~~~~vP~---~i~~v~ 692 (718)
T PRK08043 633 ALGVSPDKQ---HATAIKSDASKGE------------ALVLFTT--DSELTREKLQQYAREHGVPELAVPR---DIRYLK 692 (718)
T ss_pred HHhCCccce---EEEEEccCCCCCc------------eEEEEEc--CcccCHHHHHHHHHhcCCCcccCCc---eEEEec
Confidence 999988765 6677776654321 1222221 1122234566666665223355553 444559
Q ss_pred CccCCCCcccchHHHHHHhhc
Q 037878 1012 TMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1012 ~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+||+|++|||||++|++++.+
T Consensus 693 ~lP~t~~GKi~r~~L~~~~~~ 713 (718)
T PRK08043 693 QLPLLGSGKPDFVTLKSMVDE 713 (718)
T ss_pred ccCcCCCCCcCHHHHHHHHhc
Confidence 999999999999999887654
No 58
>PRK05677 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-52 Score=566.01 Aligned_cols=494 Identities=26% Similarity=0.372 Sum_probs=379.2
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLT-SRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~-~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
.++.+++++.++. +|+++|+...+ +.+||+||.++++++|+.|.+ . |+++||+|+++++|++++++++
T Consensus 24 ~~~~~~l~~~a~~--~p~~~al~~~~------~~~Ty~el~~~~~~la~~L~~~~---gi~~gd~Vai~~~n~~~~~~~~ 92 (562)
T PRK05677 24 PNIQAVLKQSCQR--FADKPAFSNLG------KTLTYGELYKLSGAFAAWLQQHT---DLKPGDRIAVQLPNVLQYPVAV 92 (562)
T ss_pred CcHHHHHHHHHHh--CCCCeeEEECC------ceeeHHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCCHHHHHHH
Confidence 4788899888876 48999987422 479999999999999999986 5 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCccccccc------------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHTDSW------------ 614 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~~~~------------ 614 (2280)
|||+++|++++|+++..+.++ +.++++++++++++++........... ......+...+.
T Consensus 93 la~~~~Ga~~v~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (562)
T PRK05677 93 FGAMRAGLIVVNTNPLYTARE-------MEHQFNDSGAKALVCLANMAHLAEKVLPKTGVKHVIVTEVADMLPPLKRLLI 165 (562)
T ss_pred HHHHHcCeEEeecCCCCCHHH-------HHHHHhccCceEEEEecchhhhHHHhhhccCcceeEEecccccccchhhhhc
Confidence 999999999999999999888 889999999999998754432211000 000000000000
Q ss_pred ---cc------------c---cc---ccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC-
Q 037878 615 ---VK------------N---SK---NLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK- 672 (2280)
Q Consensus 615 ---~~------------~---~~---~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~- 672 (2280)
.. . .. ..............++|+++|+|||||||+||||+++|+++...+......+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~ 245 (562)
T PRK05677 166 NAVVKHVKKMVPAYHLPQAVKFNDALAKGAGQPVTEANPQADDVAVLQYTGGTTGVAKGAMLTHRNLVANMLQCRALMGS 245 (562)
T ss_pred ccchhhccccccccCCcccccHHHHHhcCCCCCCCCCCCCccCEEEEEeCCCCCCCCcEEEEehhHHHHHHHHHHHHhcc
Confidence 00 0 00 00000011122346799999999999999999999999999887766555443
Q ss_pred -CC-CCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccc
Q 037878 673 -ST-SKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSK 750 (2280)
Q Consensus 673 -~~-~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~ 750 (2280)
.. ..+++++.+|++|.+++...++..+..|++.++.+. . .++..+++.++++++|++..+|+++..+......
T Consensus 246 ~~~~~~~~~~~~~pl~h~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~-- 320 (562)
T PRK05677 246 NLNEGCEILIAPLPLYHIYAFTFHCMAMMLIGNHNILISN-P--RDLPAMVKELGKWKFSGFVGLNTLFVALCNNEAF-- 320 (562)
T ss_pred CCCCCccEEEEcCcHHHHHHHHHHHHHHHHcCCeEEEecC-c--ccHHHHHHHHHHcCceEEecHHHHHHHHHhCccc--
Confidence 33 346889999999999987778888888887766543 2 3788999999999999999999998877653211
Q ss_pred ccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeecccc
Q 037878 751 DKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVD 830 (2280)
Q Consensus 751 ~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG 830 (2280)
...+++++|.+++||+++++++.++|.+.+ ++.+++.||+||++.+++..... ....+++|
T Consensus 321 ---~~~~~~~lr~v~~gG~~~~~~~~~~~~~~~------~~~v~~~YG~tE~~~~~~~~~~~----------~~~~~~vG 381 (562)
T PRK05677 321 ---RKLDFSALKLTLSGGMALQLATAERWKEVT------GCAICEGYGMTETSPVVSVNPSQ----------AIQVGTIG 381 (562)
T ss_pred ---ccCChhhceEEEEcCccCCHHHHHHHHHHc------CCCeeccCCccccCcceeecCcc----------CCCCCccC
Confidence 124567899999999999999999998863 56799999999998765533211 11246789
Q ss_pred CCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEE
Q 037878 831 QNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFIT 909 (2280)
Q Consensus 831 ~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~ 909 (2280)
.|+|+++++|+|+++ ..+|.|+.|||+|+|+.+++||+++|+.|++.|.. ++||+|||+|+++ ||.++|.
T Consensus 382 ~~~~~~~v~i~d~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~-------~g~~~TGDlg~~~~~G~l~i~ 452 (562)
T PRK05677 382 IPVPSTLCKVIDDDG--NELPLGEVGELCVKGPQVMKGYWQRPEATDEILDS-------DGWLKTGDIALIQEDGYMRIV 452 (562)
T ss_pred ccCCCCEEEEECCCC--CCCCCCCCeEEEEecCccchhhcCCchhhhhccCC-------CCcccccceEEECCCCcEEEE
Confidence 999999999999875 34589999999999999999999999999988853 4899999999997 9999999
Q ss_pred ecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHH
Q 037878 910 GRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIE 988 (2280)
Q Consensus 910 GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~ 988 (2280)
||+||+||++|++|+|.|||++|.++++|.+ ++|++++++..+ +.+.++++ ..++. ...+++.+
T Consensus 453 GR~~d~i~~~G~~i~p~eiE~~l~~~~~v~~---~~v~g~~~~~~g----------~~~~~~v~--~~~~~~~~~~~l~~ 517 (562)
T PRK05677 453 DRKKDMILVSGFNVYPNELEDVLAALPGVLQ---CAAIGVPDEKSG----------EAIKVFVV--VKPGETLTKEQVME 517 (562)
T ss_pred ecCcCeEEeCCEEECHHHHHHHHHhCCCccE---EEEEeccCccCC----------ceEEEEEE--eCCCCCCCHHHHHH
Confidence 9999999999999999999999999999975 888888765322 22233332 22222 23357778
Q ss_pred HHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 989 NIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 989 ~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
.++++++. +++| ..++.+++||+|+|||++|++|++++..
T Consensus 518 ~~~~~l~~-~~~P---~~i~~v~~iP~t~sGKi~r~~L~~~~~~ 557 (562)
T PRK05677 518 HMRANLTG-YKVP---KAVEFRDELPTTNVGKILRRELRDEELK 557 (562)
T ss_pred HHHHhhhh-ccCC---cEEEEeccCCCCCcccccHHHHHHHHHH
Confidence 88887765 5555 3445569999999999999999887543
No 59
>PLN02387 long-chain-fatty-acid-CoA ligase family protein
Probab=100.00 E-value=5.1e-53 Score=578.63 Aligned_cols=465 Identities=21% Similarity=0.259 Sum_probs=344.0
Q ss_pred cccCcccccCCCCCCCCCCCCHHHHHHhhccccccCCceEEEEE---------cCCC--------ceeeeccHHHHHHHH
Q 037878 450 WARNFKELEELPGVEFPELSSLDGYLKHWGTHRITQKKTLFTWI---------NEEG--------VAVNQSTYEELDANA 512 (2280)
Q Consensus 450 ~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~---------~~~g--------~~~~~lTY~eL~~~a 512 (2280)
.+|+.... ++....++...|+.+++++.++.. ||++|+.+. ..++ .+++.+||+||.+++
T Consensus 40 ~~r~~~~~-~~~~~~~~~~~t~~~l~~~~~~~~--pd~~al~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Ty~el~~~v 116 (696)
T PLN02387 40 AIRNARFP-ELVETPWEGATTLAALFEQSCKKY--SDKRLLGTRKLISREFETSSDGRKFEKLHLGEYEWITYGQVFERV 116 (696)
T ss_pred ceecCccc-cccccCCCCCCCHHHHHHHHHHHC--CCCceEEEecccccccccccCCcccccccCCCcEEEEHHHHHHHH
Confidence 35555422 344445677789999999998874 889998542 0112 123569999999999
Q ss_pred HHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEcc
Q 037878 513 SRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTI 592 (2280)
Q Consensus 513 ~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~ 592 (2280)
+++|++|.++ |+++||+|+|+++|++||++++|||+++|+++||+++..+.++ +.++++++++++++++.
T Consensus 117 ~~lA~~L~~l---G~~~gd~Vai~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~-------l~~il~~s~~~~li~~~ 186 (696)
T PLN02387 117 CNFASGLVAL---GHNKEERVAIFADTRAEWLIALQGCFRQNITVVTIYASLGEEA-------LCHSLNETEVTTVICDS 186 (696)
T ss_pred HHHHHHHHHh---CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEEecCCCCHHH-------HHHHHHccCCCEEEECH
Confidence 9999999998 9999999999999999999999999999999999999999888 88999999999999976
Q ss_pred ccchhhccC--CCCCCC-ccccccccc------------------cccccccccccccCCCCCCCeEEEEeccCCCCCce
Q 037878 593 GYHSAVRVG--SWPNLP-WLHTDSWVK------------------NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAK 651 (2280)
Q Consensus 593 ~~~~~~~~~--~~~~~~-~~~~~~~~~------------------~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PK 651 (2280)
+....+... ..+.+. .+..++... ...............+.++|+++|+|||||||.||
T Consensus 187 ~~~~~l~~~~~~~~~l~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~I~yTSGTTG~PK 266 (696)
T PLN02387 187 KQLKKLIDISSQLETVKRVIYMDDEGVDSDSSLSGSSNWTVSSFSEVEKLGKENPVDPDLPSPNDIAVIMYTSGSTGLPK 266 (696)
T ss_pred HHHHHHHHHhhccCCceEEEEECCCCchhhhhhhccCCcEEEEHHHHHHhhccCCCCCCCCCccceEEEEecCCCCCCCC
Confidence 543322111 111111 111111000 00000001111223356899999999999999999
Q ss_pred EEEEchHHHHHHHHHHHHHc-CCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCcccccc----CHHHHHHHHhh
Q 037878 652 GVMITHGGLIHNVKLMRKRY-KSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIK----NPLLWLETMSK 726 (2280)
Q Consensus 652 gV~~tH~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~----~p~~l~~~i~~ 726 (2280)
||++||+|+++.+......+ ++.++|++++++|++|.+++.... ..+..|+++....+..+.. -+..++..+++
T Consensus 267 GV~lth~~l~~~~~~~~~~~~~~~~~d~~l~~lPl~Hi~~~~~~~-~~~~~g~~i~~g~~~~l~~~~~~~~~~~~~~i~~ 345 (696)
T PLN02387 267 GVMMTHGNIVATVAGVMTVVPKLGKNDVYLAYLPLAHILELAAES-VMAAVGAAIGYGSPLTLTDTSNKIKKGTKGDASA 345 (696)
T ss_pred EEEEEcHHHHHHHHHHHhhcCCCCCCCEEEEECcHHHHHHHHHHH-HHHHhCCEEEECChhhhcccccccccCchhhHHH
Confidence 99999999998887766554 578899999999999999986543 3566777765533322111 02234567889
Q ss_pred cceeeecCcHHHHHHHHHHHhccccc-----------------------------cc--cc----------CC-CCccEE
Q 037878 727 YRATHSAGPNFAFELMVRRLESSKDK-----------------------------VR--SF----------DL-SSMKFL 764 (2280)
Q Consensus 727 ~~vt~~~~~p~~~~~l~~~~~~~~~~-----------------------------~~--~~----------~l-~~Lr~l 764 (2280)
+++|++.++|.+++.+.+........ .. .+ .+ +++|.+
T Consensus 346 ~~pT~~~~vP~~l~~l~~~~~~~~~~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lg~~lr~i 425 (696)
T PLN02387 346 LKPTLMTAVPAILDRVRDGVRKKVDAKGGLAKKLFDIAYKRRLAAIEGSWFGAWGLEKLLWDALVFKKIRAVLGGRIRFM 425 (696)
T ss_pred hCCcEEEehhHHHHHHHHHHHHHHhcccHHHHHHHHHHHHHHHHHhccCCcccccccchhhHHHHHHHHHHHhCCcEEEE
Confidence 99999999999998887543211000 00 00 01 589999
Q ss_pred EEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEc-C
Q 037878 765 MVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVN-P 843 (2280)
Q Consensus 765 ~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd-~ 843 (2280)
++||+++++++.+.+...+ ++.++++||+||++..++..... ....|++|+|+|+++++|+| +
T Consensus 426 ~~GGapl~~~~~~~~~~~~------g~~v~~~YG~TEt~~~~~~~~~~----------~~~~gsvG~p~p~~evkivd~~ 489 (696)
T PLN02387 426 LSGGAPLSGDTQRFINICL------GAPIGQGYGLTETCAGATFSEWD----------DTSVGRVGPPLPCCYVKLVSWE 489 (696)
T ss_pred EEcCCCCCHHHHHHHHHHc------CCCeeEeechhhcccceeecCcc----------cCCCCccCCCCCceEEEEeecc
Confidence 9999999999876665443 56799999999998766543211 12347899999999999999 4
Q ss_pred CCCccc-CCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE-CC
Q 037878 844 ETSEEI-GEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV-AG 920 (2280)
Q Consensus 844 ~~~~~~-~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi-~G 920 (2280)
+++... .++++.|||+|+||+++.|||++|+.|+++|..+ .+|.|||||||+|+++ ||+|+|+||+||+||+ +|
T Consensus 490 ~~~~~~~~~~~p~GEi~vrGp~v~~GY~~~pe~T~~~f~~d---~~G~~W~~TGDig~~d~dG~l~i~gR~kd~ik~~~G 566 (696)
T PLN02387 490 EGGYLISDKPMPRGEIVIGGPSVTLGYFKNQEKTDEVYKVD---ERGMRWFYTGDIGQFHPDGCLEIIDRKKDIVKLQHG 566 (696)
T ss_pred ccCcccCCCCCCCceEEeccCcccchhcCCHHHHhhhhccc---cCCCceeecCceEEECCCCcEEEEEcccceEECCCC
Confidence 543221 1345679999999999999999999999999532 2345699999999997 9999999999999998 69
Q ss_pred eeechHHHHHHHHhccCCcCCceeEEEecc
Q 037878 921 RNVYSADVEKTVESSTEHIRPGCCAVIGVP 950 (2280)
Q Consensus 921 ~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~ 950 (2280)
++|+|.|||++|.+||.|.+ |+|++.+
T Consensus 567 e~I~p~eIE~~l~~~p~V~~---~~V~g~~ 593 (696)
T PLN02387 567 EYVSLGKVEAALSVSPYVDN---IMVHADP 593 (696)
T ss_pred eEEchHHHHHHHhcCCCeeE---EEEEecC
Confidence 99999999999999999965 8888754
No 60
>PTZ00216 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.8e-53 Score=579.28 Aligned_cols=432 Identities=19% Similarity=0.244 Sum_probs=328.8
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcC-----------CCc----------eeeeccHHHHHHHHHHHHHHHHhcC
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINE-----------EGV----------AVNQSTYEELDANASRIAHKLLTSR 523 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~-----------~g~----------~~~~lTY~eL~~~a~~lA~~L~~~~ 523 (2280)
+++..++.++|++.+++. |+++|+.+... +|. ..+.+||+||.++++++|+.|+++
T Consensus 65 ~~~~~t~~~~~~~~~~~~--p~~~a~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lTy~el~~~~~~lA~~L~~~- 141 (700)
T PTZ00216 65 WYYGPNFLQRLERICKER--GDRRALAYRPVERVEKEVVKDADGKERTMEVTHFNETRYITYAELWERIVNFGRGLAEL- 141 (700)
T ss_pred cCCCCCHHHHHHHHHHhC--CCCCeEEEeccccccccccccCCCccccccccccCCceEeEHHHHHHHHHHHHHHHHHh-
Confidence 456678999999999874 88999887421 121 247999999999999999999998
Q ss_pred CCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhcc---
Q 037878 524 KPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRV--- 600 (2280)
Q Consensus 524 ~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~--- 600 (2280)
|+++||+|+|+++|++||++++|||+++|+++||+++..+.++ +.++++++++++++++......+..
T Consensus 142 --Gv~~gd~V~i~~~n~~e~~~~~lA~~~~G~v~vpl~~~~~~~~-------l~~il~~s~~~~lv~~~~~~~~l~~~~~ 212 (700)
T PTZ00216 142 --GLTKGSNVAIYEETRWEWLASIYGIWSQSMVAATVYANLGEDA-------LAYALRETECKAIVCNGKNVPNLLRLMK 212 (700)
T ss_pred --CCCCCCEEEEEcCCCHHHHHHHHHHHHcCCeEEeeCCCCCHHH-------HHhhhhccCccEEEECHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999998887 8899999999999997653322110
Q ss_pred -CCCCCCCcccccccccc-------------ccccc---cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHH
Q 037878 601 -GSWPNLPWLHTDSWVKN-------------SKNLL---AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHN 663 (2280)
Q Consensus 601 -~~~~~~~~~~~~~~~~~-------------~~~~~---~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~ 663 (2280)
...+....+..+..... ..... ........+..++|+|+|+|||||||.||||++||+|+++.
T Consensus 213 ~~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~nl~~~ 292 (700)
T PTZ00216 213 SGGMPNTTIIYLDSLPASVDTEGCRLVAWTDVVAKGHSAGSHHPLNIPENNDDLALIMYTSGTTGDPKGVMHTHGSLTAG 292 (700)
T ss_pred hccCCceEEEEECCCccccccCCceEEEHHHHHHhCCccccccccCCCCCcccEEEEEEeCCCCCcCcEEEEEhHHHHHH
Confidence 00111111111110000 00000 00011123346899999999999999999999999999998
Q ss_pred HHHHHHHc----C-CCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHH-------HHhhcceee
Q 037878 664 VKLMRKRY----K-STSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLE-------TMSKYRATH 731 (2280)
Q Consensus 664 ~~~~~~~~----~-~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~-------~i~~~~vt~ 731 (2280)
+.+....+ . ..+++++++++|++|.+++.. ....+..|+++++. ++..+.+ .++++++|+
T Consensus 293 ~~~~~~~~~~~~~~~~~~d~~ls~lPl~H~~~~~~-~~~~l~~G~~v~~~-------~~~~l~~~~~~~~~~l~~~~pT~ 364 (700)
T PTZ00216 293 ILALEDRLNDLIGPPEEDETYCSYLPLAHIMEFGV-TNIFLARGALIGFG-------SPRTLTDTFARPHGDLTEFRPVF 364 (700)
T ss_pred HHHHHhhcccccCCCCCCCEEEEEChHHHHHHHHH-HHHHHHcCCEEEEC-------CHHHhhhhhccccchHHHcCCcE
Confidence 87766543 2 367899999999999998753 34456777765542 3444433 578899999
Q ss_pred ecCcHHHHHHHHHHHhcccccc--------------------cc---------------c-CCCCccEEEEecCCCCHHH
Q 037878 732 SAGPNFAFELMVRRLESSKDKV--------------------RS---------------F-DLSSMKFLMVAAEPVRQTT 775 (2280)
Q Consensus 732 ~~~~p~~~~~l~~~~~~~~~~~--------------------~~---------------~-~l~~Lr~l~~gGe~l~~~l 775 (2280)
+.++|.+++.+.+......... .. . --+++|.+++||+++++++
T Consensus 365 ~~~vP~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~v~~~~~~~~g~~lr~i~~GGa~l~~~~ 444 (700)
T PTZ00216 365 LIGVPRIFDTIKKAVEAKLPPVGSLKRRVFDHAYQSRLRALKEGKDTPYWNEKVFSAPRAVLGGRVRAMLSGGGPLSAAT 444 (700)
T ss_pred EEechHHHHHHHHHHHHHHhccCHHHHHHHHHHHHHHHHHHHcCCCCchHHHHHHHHHHHHhCCcEEEEEECCCCCCHHH
Confidence 9999999988765432110000 00 0 0158999999999999998
Q ss_pred HHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCe
Q 037878 776 VKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKE 855 (2280)
Q Consensus 776 ~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~ 855 (2280)
.+.+...+ + .++|+||+||+++.++..... ....+++|+|+||++++|+|+++.....++++.
T Consensus 445 ~~~~~~~~------~-~l~~~YG~TEt~~~~~~~~~~----------~~~~~svG~p~~g~evkI~d~~~~~~~~~~~~~ 507 (700)
T PTZ00216 445 QEFVNVVF------G-MVIQGWGLTETVCCGGIQRTG----------DLEPNAVGQLLKGVEMKLLDTEEYKHTDTPEPR 507 (700)
T ss_pred HHHHHHHh------h-hHhhccCcccccccccccCCC----------CCCCCCcCCcCCCeEEEEeechhhccCCCCCCC
Confidence 87665542 3 799999999998765543211 223478999999999999997654334456778
Q ss_pred eEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEE-ECCeeechHHHHHHHH
Q 037878 856 GEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLII-VAGRNVYSADVEKTVE 933 (2280)
Q Consensus 856 GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IK-i~G~rI~~~EIE~~L~ 933 (2280)
|||+|+||++++||||+|++|+++|.. +|||||||+|+++ ||.|+|+||+||||| .+|+||+|+|||++|.
T Consensus 508 GEL~vrG~~v~~GY~~~pe~T~~~f~~-------dGw~~TGDig~~d~dG~l~i~GR~kd~ik~~~G~~I~p~eIE~~l~ 580 (700)
T PTZ00216 508 GEILLRGPFLFKGYYKQEELTREVLDE-------DGWFHTGDVGSIAANGTLRIIGRVKALAKNCLGEYIALEALEALYG 580 (700)
T ss_pred ceEEEcCCcccchhcCChhHhhhhccc-------cCCeeccceEEEcCCCcEEEEEehHhheecCCCceeccHHHHHHHh
Confidence 999999999999999999999999964 3799999999997 999999999999999 7999999999999999
Q ss_pred hccCCcC
Q 037878 934 SSTEHIR 940 (2280)
Q Consensus 934 ~~p~v~~ 940 (2280)
+||.|.+
T Consensus 581 ~~p~V~~ 587 (700)
T PTZ00216 581 QNELVVP 587 (700)
T ss_pred cCcCccc
Confidence 9999964
No 61
>COG1022 FAA1 Long-chain acyl-CoA synthetases (AMP-forming) [Lipid metabolism]
Probab=100.00 E-value=6.7e-53 Score=539.14 Aligned_cols=422 Identities=23% Similarity=0.330 Sum_probs=334.2
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++...+...+..+ ++.+++...... .++.+||+|+.+++.++|++|++. |+.+||+|+|++.|+++|+++.
T Consensus 15 ~~~~~~~~~~~~~~~--~~~~a~~~~~~~--~~~~~ty~e~~~~v~~~a~gL~~l---g~~~gdrvai~a~nr~eW~i~d 87 (613)
T COG1022 15 IHTLPKRLAERVKDR--PDGVALMYKELG--GWEAITYRELYERVRALASGLLSL---GIPAGDRVAIFAANRPEWAIAD 87 (613)
T ss_pred cccHHHHHHHHhhcC--CcceeEeeecCC--cceEeeHHHHHHHHHHHHHHHHhc---CCCCCCEEEEEeCCCHHHHHHH
Confidence 345666676666664 567777665522 357999999999999999999999 8977999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCC---CCccc--------------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPN---LPWLH-------------- 610 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~---~~~~~-------------- 610 (2280)
+||+.+|++.||+.++...+. +.++++++++++++++.............. ...+.
T Consensus 88 ~a~~~~g~v~Vp~y~t~~~~~-------~~~iL~~se~~~i~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (613)
T COG1022 88 LAILALGAVSVPIYSTSTPEQ-------LAYILNESESKVIFVENQELLDLVLPVLEDCPKVVDLIVIIDLVREAVEAKA 160 (613)
T ss_pred HHHHHcCCeEEecCCCCCHHH-------HHHHHhcCCceEEEecchHHHHHHHhhhccccchhhhhhhhhhhhhccchhh
Confidence 999999999999999988877 889999999999999874332211100000 00000
Q ss_pred --cccccccccc----cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC-CCCCcEEEEEc
Q 037878 611 --TDSWVKNSKN----LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK-STSKTVLVSWL 683 (2280)
Q Consensus 611 --~~~~~~~~~~----~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~-~~~~d~~l~~~ 683 (2280)
.......... ..........++.+||+|.|+|||||||+||||++||+|+++.+........ +.++|++++++
T Consensus 161 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dDlatiiYTSGTTG~PKGVmLth~N~~~~v~~~~~~~~~~~~~d~~LsfL 240 (613)
T COG1022 161 LVLEVFPDEGISLFLIDSAGLEGRIAPPKPDDLATIIYTSGTTGTPKGVMLTHRNLLAQVAGIDEVLPPIGPGDRVLSFL 240 (613)
T ss_pred ccccccccccchhhhhcccccccccCCCCccceEEEEEcCCCCCCCceEEEehHHHHHHHHHHHhhCCCCCCCcEEEEeC
Confidence 0000000000 0000111223578999999999999999999999999999999999999997 99999999999
Q ss_pred CchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccccccc---------
Q 037878 684 PQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVR--------- 754 (2280)
Q Consensus 684 pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~--------- 754 (2280)
|++|++.++++....+.+|.+... . .++..+++.+.+.++|++.++|.+|+.+.+.+........
T Consensus 241 PlaHi~Er~~~~~~~~~~g~~~~~-~-----~~~~~~~~dl~~~rPt~m~~VPRvwE~i~~~I~~kv~~~~~~~~~if~~ 314 (613)
T COG1022 241 PLAHIFERAFEGGLALYGGVTVLF-K-----EDPRTLLEDLKEVRPTVMIGVPRVWEKVYKGIMEKVAKAPAVRRKLFRW 314 (613)
T ss_pred cHHHHHHHHHHHHHHhhcceEEEe-c-----CCHHHHHHHHHHhCCeEEeechHHHHHHHHHHHHHHHhcchhHHHHHHH
Confidence 999999997665555555554443 2 3889999999999999999999999887544322110000
Q ss_pred ---------------------------------ccCC-CCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCcc
Q 037878 755 ---------------------------------SFDL-SSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLA 800 (2280)
Q Consensus 755 ---------------------------------~~~l-~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~T 800 (2280)
...+ .++|++++||+++++++...++.. ++.+.++||+|
T Consensus 315 a~~~~~~~~~~~~~~~~~~~~~~~~d~LVf~Kir~~lGgri~~~~sGGa~l~~~~~~f~~~l-------Gi~i~eGYGlT 387 (613)
T COG1022 315 ALKVAYKKISRALLGGGPLSWLLVADRLVFRKIRDALGGRIRYALSGGAPLSPELLHFFRSL-------GIPILEGYGLT 387 (613)
T ss_pred HHHHHHHHHHhhhcccCCcchhhhhhHHHHHHHHHHhCCcEEEEEecCCcCCHHHHHHHHHc-------CCCeEEEeccc
Confidence 0011 489999999999999988877764 58899999999
Q ss_pred ccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHH
Q 037878 801 ENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITF 880 (2280)
Q Consensus 801 E~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f 880 (2280)
||+..+++.... ....|++|.|+|+++++|+| .|||+||||+|++|||++|+.|+++|
T Consensus 388 Ets~~~~v~~~~----------~~~~gtvG~p~p~~evKI~d------------~GEilVRG~~Vm~GYyk~pe~Taeaf 445 (613)
T COG1022 388 ETSAVVSVNPPD----------RFVLGTVGKPLPGIEVKIAD------------DGEILVRGPNVMKGYYKNPEATAEAF 445 (613)
T ss_pred ccccceEEcccc----------CcccCCcCCcCCCceEEEcc------------CceEEEecchhcchhcCChHHHhhhc
Confidence 999988876432 33468999999999999988 49999999999999999999999999
Q ss_pred hhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCcCCceeEEEe
Q 037878 881 RNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHIRPGCCAVIG 948 (2280)
Q Consensus 881 ~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~ 948 (2280)
++ +|||+|||+|.++ +|+|.++||+||.||+ +|++|+|+.||+.+.++|-|.+ ++|++
T Consensus 446 ~~-------DGWf~TGDlg~~d~~g~L~i~gRkK~~i~l~~GknIaP~~IE~~l~~~~~I~q---i~vvg 505 (613)
T COG1022 446 TE-------DGWFRTGDLGELDEDGYLVITGRKKELIKLSNGKNIAPEPIESKLAKSPLIEQ---ICVVG 505 (613)
T ss_pred cc-------cCCcccCceeEEcCCCcEEEeecccceEECCCCcccChHHHHHHHhcCCCeeE---EEEEe
Confidence 85 5999999999998 9999999999999999 8999999999999999998865 77777
No 62
>PRK13382 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-52 Score=561.83 Aligned_cols=486 Identities=19% Similarity=0.241 Sum_probs=372.6
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.++|++++++. |+++|+... + +++||+||+++++++|++|.++ |+++||+|+++++|+++++++++
T Consensus 43 ~~~~~~l~~~a~~~--p~~~a~~~~--~----~~~Ty~el~~~~~~~A~~L~~~---g~~~g~~V~i~~~n~~~~~~~~l 111 (537)
T PRK13382 43 MGPTSGFAIAAQRC--PDRPGLIDE--L----GTLTWRELDERSDALAAALQAL---PIGEPRVVGIMCRNHRGFVEALL 111 (537)
T ss_pred CCHHHHHHHHHHhC--CCCeEEEeC--C----CeecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEecCcHHHHHHHH
Confidence 46889898888774 899998742 1 4799999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-ccccccccc--ccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTDSWVK--NSKNLLA 623 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~~~~~--~~~~~~~ 623 (2280)
||+++|++++|+++.++.++ +.++++++++++++++......+... ..+... .+...+... .......
T Consensus 112 A~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 184 (537)
T PRK13382 112 AANRIGADILLLNTSFAGPA-------LAEVVTREGVDTVIYDEEFSATVDRALADCPQATRIVAWTDEDHDLTVEVLIA 184 (537)
T ss_pred HHHHcCcEEEecCcccCHHH-------HHHHHHhcCCCEEEEchhhHHHHHHHHhhccccceEEEecCCcccccHHHHhh
Confidence 99999999999999999888 88999999999999986544322110 001000 011100000 0000000
Q ss_pred ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccc
Q 037878 624 ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGS 703 (2280)
Q Consensus 624 ~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~ 703 (2280)
..........+++.++++|||||||+||||+++|+++..........+....+++++..+|++|.+++ ..++.++..|+
T Consensus 185 ~~~~~~~~~~~~~~~~il~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~-~~~~~~l~~g~ 263 (537)
T PRK13382 185 AHAGQRPEPTGRKGRVILLTSGTTGTPKGARRSGPGGIGTLKAILDRTPWRAEEPTVIVAPMFHAWGF-SQLVLAASLAC 263 (537)
T ss_pred ccCcCCCCCCCCCCeEEEECCCCCCCCCEEEeccchHHHHHHHHHHhhCCCCCCeEEEecChHhhhHH-HHHHHHHhcCc
Confidence 00001112356889999999999999999999999998888887778888899999999999999997 56888899999
Q ss_pred eEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHh
Q 037878 704 TAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELT 783 (2280)
Q Consensus 704 ~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~ 783 (2280)
++++.. . .+|..+++.++++++|++..+|+++..+.+..... ....+++++|.+++|||+++++++++|.+.+
T Consensus 264 ~~~~~~--~--~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---~~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~ 336 (537)
T PRK13382 264 TIVTRR--R--FDPEATLDLIDRHRATGLAVVPVMFDRIMDLPAEV---RNRYSGRSLRFAAASGSRMRPDVVIAFMDQF 336 (537)
T ss_pred EEEECC--C--cCHHHHHHHHHHhCCEEEEehHHHHHHHHcCCchh---cccCCccceeEEEEcCCCCCHHHHHHHHHHc
Confidence 988754 2 38999999999999999999999998886532211 1124567899999999999999999999875
Q ss_pred cCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCC
Q 037878 784 RPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSP 863 (2280)
Q Consensus 784 ~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp 863 (2280)
+..++|.||+||++.+++..... . ....+++|+|+++++++|+|+++ ..+|.|+.|||+|+|+
T Consensus 337 ------~~~i~~~YG~TE~~~~~~~~~~~-~--------~~~~~~vG~p~~~~~~~i~d~~~--~~~~~g~~GEl~v~g~ 399 (537)
T PRK13382 337 ------GDVIYNNYNATEAGMIATATPAD-L--------RAAPDTAGRPAEGTEIRILDQDF--REVPTGEVGTIFVRND 399 (537)
T ss_pred ------CCcEEecccccccCcceecChhH-h--------ccCCCCccccCcCcEEEEECCCC--CCCCCCCeeEEEEEcC
Confidence 34699999999998765532211 0 11246799999999999999875 3457999999999999
Q ss_pred CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCc
Q 037878 864 SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPG 942 (2280)
Q Consensus 864 ~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~ 942 (2280)
+++.||+ |+.+.. |. ++||+|||+++++ ||+++|+||+||+||++|+||+|.|||++|.++|+|.+
T Consensus 400 ~~~~gY~--~~~~~~-~~--------~g~~~TGDl~~~~~~g~l~~~GR~dd~ik~~G~~v~~~eIE~~l~~~~~V~~-- 466 (537)
T PRK13382 400 TQFDGYT--SGSTKD-FH--------DGFMASGDVGYLDENGRLFVVGRDDEMIVSGGENVYPIEVEKTLATHPDVAE-- 466 (537)
T ss_pred CcccCcc--ccchhh-cc--------CCCEeeCceEEEeCCCcEEEeccccceeEECCEEECHHHHHHHHHhCCCEee--
Confidence 9999998 555543 32 3799999999997 99999999999999999999999999999999999975
Q ss_pred eeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCccc
Q 037878 943 CCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKI 1021 (2280)
Q Consensus 943 ~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKv 1021 (2280)
++|++++++..+ +....+++ ..++.. ..+++.+.++++++. +++| ..++.++++|+|++||+
T Consensus 467 -~~v~~~~~~~~g----------~~~~a~vv--~~~~~~~~~~~l~~~l~~~l~~-~~~P---~~i~~v~~lP~t~~gK~ 529 (537)
T PRK13382 467 -AAVIGVDDEQYG----------QRLAAFVV--LKPGASATPETLKQHVRDNLAN-YKVP---RDIVVLDELPRGATGKI 529 (537)
T ss_pred -EEEEccCccccC----------CEEEEEEE--ECCCCCCCHHHHHHHHHHhccC-CCCC---cEEEEeccCCCCCCCCC
Confidence 888888765432 22222222 222322 224566666666654 4444 44555589999999999
Q ss_pred chHHHH
Q 037878 1022 KRFECL 1027 (2280)
Q Consensus 1022 dR~~L~ 1027 (2280)
+|++|+
T Consensus 530 ~r~~L~ 535 (537)
T PRK13382 530 LRRELQ 535 (537)
T ss_pred cHHhhC
Confidence 999764
No 63
>PRK06839 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.5e-52 Score=551.77 Aligned_cols=487 Identities=19% Similarity=0.305 Sum_probs=381.9
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLT-SRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~-~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.+.+.++++|+.. |+++|+...+ +.+||+||.++++++|+.|++ . |+++||+|+++++|+++++++++
T Consensus 3 ~~~~~~~~~a~~~--p~~~a~~~~~------~~~ty~~l~~~~~~la~~L~~~~---g~~~~~~V~i~~~~~~~~~~~~l 71 (496)
T PRK06839 3 GIAYWIEKRAYLH--PDRIAIITEE------EEMTYKQLHEYVSKVAAYLIYEL---NVKKGERIAILSQNSLEYIVLLF 71 (496)
T ss_pred cHHHHHHHHHHHC--CCCeEEEECC------ceEEHHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCCHHHHHHHH
Confidence 4677888888774 8999987521 689999999999999999975 5 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC--CCCCCccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS--WPNLPWLHTDSWVKNSKNLLAENV 626 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~ 626 (2280)
||+++|++++|+++..+.++ +..++++++++.++++........... ......+...++.. ......
T Consensus 72 a~~~~G~~~~~~~~~~~~~~-------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~ 140 (496)
T PRK06839 72 AIAKVECIAVPLNIRLTENE-------LIFQLKDSGTTVLFVEKTFQNMALSMQKVSYVQRVISITSLKE----IEDRKI 140 (496)
T ss_pred HHHhcCcEEEecCcccCHHH-------HHHHHHhcCceEEEEcHHHHHHHHHhhhccCcceEEEecchHh----hhccCC
Confidence 99999999999999888777 788999999999999866543322110 00011111111110 001111
Q ss_pred cccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEE
Q 037878 627 VCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAI 706 (2280)
Q Consensus 627 ~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~v 706 (2280)
.......++++++|+|||||||.||+|+++|+++..........++...+++++.++|++|..++...++.++..|++++
T Consensus 141 ~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~g~~~~ 220 (496)
T PRK06839 141 DNFVEKNESASFIICYTSGTTGKPKGAVLTQENMFWNALNNTFAIDLTMHDRSIVLLPLFHIGGIGLFAFPTLFAGGVII 220 (496)
T ss_pred CCCCCCCCCCcEEEEeCCCCCCCCcEEEEEhHHHHHHHHHHHHHcCCCCCCeEEEeeCCcchhhHHHHHHHHHhcCcEEE
Confidence 12234567899999999999999999999999988776666677788999999999999999998777788999999988
Q ss_pred EeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCC
Q 037878 707 LFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPF 786 (2280)
Q Consensus 707 l~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~ 786 (2280)
+.+. .++..+++.++++++|++.++|.+++.+++..... ..+++++|.+++||+++++++.+++.+.
T Consensus 221 ~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-----~~~~~~lr~~~~gG~~~~~~~~~~~~~~---- 287 (496)
T PRK06839 221 VPRK----FEPTKALSMIEKHKVTVVMGVPTIHQALINCSKFE-----TTNLQSVRWFYNGGAPCPEELMREFIDR---- 287 (496)
T ss_pred EccC----CCHHHHHHHHHhhCCeEEEehHHHHHHHHhCcccc-----cCCCcccceEEECCCCCCHHHHHHHHHh----
Confidence 7542 38999999999999999999999998887643221 2567899999999999999999998764
Q ss_pred CCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcc
Q 037878 787 GLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAG 866 (2280)
Q Consensus 787 g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~ 866 (2280)
++.+.+.||+||++..++....... ....+++|+|+++++++|+|+++. . ++.|+.|||+|+|+.++
T Consensus 288 ---g~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~G~p~~~~~~~i~d~~~~-~-~~~g~~Gel~v~~~~~~ 354 (496)
T PRK06839 288 ---GFLFGQGFGMTETSPTVFMLSEEDA--------RRKVGSIGKPVLFCDYELIDENKN-K-VEVGEVGELLIRGPNVM 354 (496)
T ss_pred ---CCeeEeeccCCCCCcceEecccccc--------cccCCCCcccCCCceEEEECCCcC-C-CCCCCceEEEEECCCcc
Confidence 4679999999999865443221110 123478999999999999998874 3 57999999999999999
Q ss_pred cccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeE
Q 037878 867 IGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCA 945 (2280)
Q Consensus 867 ~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aa 945 (2280)
.||+++|+.++..|. ++||+|||+++++ ||.++++||.||+||.+|++|+|.|||++|.++|+|.+ ++
T Consensus 355 ~gy~~~~~~~~~~~~--------~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~p~~iE~~l~~~~~v~~---~~ 423 (496)
T PRK06839 355 KEYWNRPDATEETIQ--------DGWLCTGDLARVDEDGFVYIVGRKKEMIISGGENIYPLEVEQVINKLSDVYE---VA 423 (496)
T ss_pred hhhcCChHHHHHHHc--------CCCeeecceEEEcCCCcEEEeccccceEEECCEEECHHHHHHHHHhCCCeeE---EE
Confidence 999999999988774 3899999999996 99999999999999999999999999999999999875 88
Q ss_pred EEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchH
Q 037878 946 VIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRF 1024 (2280)
Q Consensus 946 Vv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~ 1024 (2280)
|++.+++..+ ....++++ ..++.. ...+++++++++++. +++ |..++.++++|+|.+||++|+
T Consensus 424 v~~~~~~~~g----------~~~~~~v~--~~~~~~~~~~~l~~~~~~~l~~-~~~---P~~~~~v~~~P~t~~GKi~r~ 487 (496)
T PRK06839 424 VVGRQHVKWG----------EIPIAFIV--KKSSSVLIEKDVIEHCRLFLAK-YKI---PKEIVFLKELPKNATGKIQKA 487 (496)
T ss_pred EEeccccccC----------ceEEEEEE--ECCCCCCCHHHHHHHHHhhCcC-CCC---CcEEEEeccCCCCccccccHH
Confidence 8888775432 12222222 222322 224566666666554 343 445566699999999999999
Q ss_pred HHHHHhh
Q 037878 1025 ECLKQFV 1031 (2280)
Q Consensus 1025 ~L~~~~~ 1031 (2280)
+|+++..
T Consensus 488 ~l~~~~~ 494 (496)
T PRK06839 488 QLVNQLK 494 (496)
T ss_pred HHHHHhh
Confidence 9988754
No 64
>PRK08315 AMP-binding domain protein; Validated
Probab=100.00 E-value=1.8e-51 Score=557.07 Aligned_cols=503 Identities=23% Similarity=0.361 Sum_probs=386.9
Q ss_pred CCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 467 ELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 467 ~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
...++.+++++.+++. |+++|+.+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+++++++
T Consensus 14 ~~~~l~~~l~~~~~~~--~~~~ai~~~~~~----~~~Ty~~l~~~~~~~a~~L~~~---gi~~g~~V~i~~~~~~~~~~~ 84 (559)
T PRK08315 14 LEQTIGQLLDRTAARY--PDREALVYRDQG----LRWTYREFNEEVDALAKGLLAL---GIEKGDRVGIWAPNVPEWVLT 84 (559)
T ss_pred hhccHHHHHHHHHHHC--CCCeEEEEcCCC----eEEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCChHHHHH
Confidence 3557899999888774 889998765432 5799999999999999999988 899999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh-----hcc---------------CCCCCC
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA-----VRV---------------GSWPNL 606 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~-----~~~---------------~~~~~~ 606 (2280)
+|||+++|++++|+++..+.++ +..+++++++++++++...... +.. ...+..
T Consensus 85 ~la~~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (559)
T PRK08315 85 QFATAKIGAILVTINPAYRLSE-------LEYALNQSGCKALIAADGFKDSDYVAMLYELAPELATCEPGQLQSARLPEL 157 (559)
T ss_pred HHHHHHhCeEEEecCccCCHHH-------HHHHHHhcCCCEEEEeccccccchHHHHHHhhhhhhcccccccccccCCCc
Confidence 9999999999999999998887 8899999999999987643210 000 000000
Q ss_pred C-ccccc-----------cccccccccc-cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCC
Q 037878 607 P-WLHTD-----------SWVKNSKNLL-AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKS 673 (2280)
Q Consensus 607 ~-~~~~~-----------~~~~~~~~~~-~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~ 673 (2280)
. .+... ++........ ...........+++++||+|||||||.||||.++|+++...+......+++
T Consensus 158 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~ 237 (559)
T PRK08315 158 RRVIFLGDEKHPGMLNFDELLALGRAVDDAELAARQATLDPDDPINIQYTSGTTGFPKGATLTHRNILNNGYFIGEAMKL 237 (559)
T ss_pred eeEEeecccCCcccccHHHHHhhccccccccccchhccCCCCCcEEEEEcCCCCCCcceEEeeHHHHHHHHHHHHHhcCC
Confidence 0 00000 0000000000 000011223457899999999999999999999999999999888888999
Q ss_pred CCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccc
Q 037878 674 TSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKV 753 (2280)
Q Consensus 674 ~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~ 753 (2280)
.++|+++..+|++|..+++..++.++..|+++++... . .+|..+++.++++++|++.++|+++..++.....
T Consensus 238 ~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~-~--~~~~~~~~~l~~~~~t~~~~~P~~~~~~~~~~~~----- 309 (559)
T PRK08315 238 TEEDRLCIPVPLYHCFGMVLGNLACVTHGATMVYPGE-G--FDPLATLAAVEEERCTALYGVPTMFIAELDHPDF----- 309 (559)
T ss_pred CCCceEEEecCcHHHHHHHHHHHHHHhccceEEEecC-C--CCHHHHHHHHHHcCCeEEecchHHHHHHHhCccc-----
Confidence 9999999999999999998889999999999886443 2 3899999999999999999999988777643221
Q ss_pred cccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCC
Q 037878 754 RSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQND 833 (2280)
Q Consensus 754 ~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~ 833 (2280)
...+++++|.+++||+++++++.+++.+.+ ...+++|.||+||++.+++...... +. ....+++|+|+
T Consensus 310 ~~~~~~~lr~~~~~G~~~~~~~~~~~~~~~-----~~~~l~~~YG~tE~~~~~~~~~~~~-~~------~~~~~~vG~p~ 377 (559)
T PRK08315 310 ARFDLSSLRTGIMAGSPCPIEVMKRVIDKM-----HMSEVTIAYGMTETSPVSTQTRTDD-PL------EKRVTTVGRAL 377 (559)
T ss_pred CCCCchhhheeEecCCCCCHHHHHHHHHHc-----CCcceeEEEcccccccceeecCccc-ch------hhccCCCCccC
Confidence 124678999999999999999999998875 2456999999999987665432211 10 11246789999
Q ss_pred CCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecC
Q 037878 834 PDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRI 912 (2280)
Q Consensus 834 pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~ 912 (2280)
|+++++|+|++++ ..++.|+.|||+|+|+++++||+++|+.+++.|.. ++||+|||+++++ ||.++|+||+
T Consensus 378 ~~~~v~i~d~~~~-~~~~~g~~GEl~v~g~~~~~gy~~~~~~~~~~~~~-------~~~~~TGD~~~~~~dg~~~~~GR~ 449 (559)
T PRK08315 378 PHLEVKIVDPETG-ETVPRGEQGELCTRGYSVMKGYWNDPEKTAEAIDA-------DGWMHTGDLAVMDEEGYVNIVGRI 449 (559)
T ss_pred CCcEEEEEcCccC-CcCCCCCceEEEEECchhhhhhcCChhHHhhcCCC-------CCCEEccceEEEcCCceEEEEeec
Confidence 9999999998844 34579999999999999999999999999887742 4899999999996 9999999999
Q ss_pred CCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHH
Q 037878 913 KDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIK 991 (2280)
Q Consensus 913 dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~ 991 (2280)
||+||++|+||+|.|||++|.++++|.+ ++|++++++..+ +...+++. ...+... ..++.+.++
T Consensus 450 d~~i~~~G~~v~~~eIE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v~--~~~~~~~~~~~l~~~l~ 514 (559)
T PRK08315 450 KDMIIRGGENIYPREIEEFLYTHPKIQD---VQVVGVPDEKYG----------EEVCAWII--LRPGATLTEEDVRDFCR 514 (559)
T ss_pred cceEEECCEEEcHHHHHHHHHhCCCceE---EEEEecCCCCCC----------eEEEEEEE--eCCCCCCCHHHHHHHHH
Confidence 9999999999999999999999998865 888887664321 22222222 2222222 245556665
Q ss_pred HHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 992 TRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 992 ~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
++++. ++ .|..++.+++||+|++||++|++|++++.+
T Consensus 515 ~~l~~-~~---~P~~i~~v~~lP~t~~GK~~r~~L~~~~~~ 551 (559)
T PRK08315 515 GKIAH-YK---IPRYIRFVDEFPMTVTGKIQKFKMREMMIE 551 (559)
T ss_pred hhccc-cc---CCcEEEEcccCCCCCCCceeHHHHHHHHHh
Confidence 55543 33 444556669999999999999999888654
No 65
>PRK08180 feruloyl-CoA synthase; Reviewed
Probab=100.00 E-value=9.7e-52 Score=562.48 Aligned_cols=516 Identities=20% Similarity=0.250 Sum_probs=375.5
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++++++. |+++|+.+.+..+ ..+++||+||.++++++|+.|.+. |+++||+|+++++|++++++++
T Consensus 38 ~~~l~~~l~~~a~~~--p~~~a~~~~~~~~-~~~~~Ty~el~~~v~~~A~~L~~~---Gv~~gd~Vai~~~n~~e~~~~~ 111 (614)
T PRK08180 38 PRRLTDRLVHWAQEA--PDRVFLAERGADG-GWRRLTYAEALERVRAIAQALLDR---GLSAERPLMILSGNSIEHALLA 111 (614)
T ss_pred CccHHHHHHHHHHHC--CCCceeeeccCCC-ceeEeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEecCCCHHHHHHH
Confidence 357888998888764 8899987653222 236899999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEcccc--chhhccCCCCCCCccccccccc-----cccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGY--HSAVRVGSWPNLPWLHTDSWVK-----NSKN 620 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~--~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 620 (2280)
|||+++|+++||+++.++... ....++.++++++++++++++... ...+..........+..+.... ....
T Consensus 112 lA~~~~Gav~vpl~~~~~~~~--~~~~~l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 189 (614)
T PRK08180 112 LAAMYAGVPYAPVSPAYSLVS--QDFGKLRHVLELLTPGLVFADDGAAFARALAAVVPADVEVVAVRGAVPGRAATPFAA 189 (614)
T ss_pred HHHHHcCCeEeeecccccccc--CCHHHHHHHHhcCCCcEEEEcCHHHHHHHHhhhccCCceEEEecCCCCCcccccHHH
Confidence 999999999999999887210 001228899999999999997431 1111110000111111100000 0000
Q ss_pred cccc-----cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCC--CCcEEEEEcCchhhhhHHH
Q 037878 621 LLAE-----NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKST--SKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 621 ~~~~-----~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~--~~d~~l~~~pl~h~~gl~~ 693 (2280)
.... .........++|+++|+|||||||.||||++||+|+.+.+......++.. .++++++++|++|.+++..
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g~~~ 269 (614)
T PRK08180 190 LLATPPTAAVDAAHAAVGPDTIAKFLFTSGSTGLPKAVINTHRMLCANQQMLAQTFPFLAEEPPVLVDWLPWNHTFGGNH 269 (614)
T ss_pred HhccccccchhhhccCCCcCceEEEEECCCCCCCCCEEEeehHHHHHHHHHHHhhccccCCCCcEEEEecchHHHhhHHH
Confidence 0000 00111234679999999999999999999999999999888777777654 5689999999999999888
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
.++.+++.|+++++.+......++..+++.++++++|++.++|.++..+++....... ....++++||.+++||+++++
T Consensus 270 ~~~~~l~~G~~v~~~~~~~~~~~~~~~l~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~-~~~~~~~~lr~v~~gGa~l~~ 348 (614)
T PRK08180 270 NLGIVLYNGGTLYIDDGKPTPGGFDETLRNLREISPTVYFNVPKGWEMLVPALERDAA-LRRRFFSRLKLLFYAGAALSQ 348 (614)
T ss_pred HHHHHHhcCCEEEEeCCCccchhHHHHHHHHHHhCCcEEechHHHHHHHHHHHHhchh-hhhhhccceeEEEEccCCCCH
Confidence 8889999999998865321112345678889999999999999999988876543211 122457899999999999999
Q ss_pred HHHHHHHHHhcC-CCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCC
Q 037878 774 TTVKRFVELTRP-FGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEP 852 (2280)
Q Consensus 774 ~l~~~~~~~~~~-~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~ 852 (2280)
++.+++.+.+.. +| .++.+++.||+||++.+++..... ....+++|+|+||++++|+|+
T Consensus 349 ~~~~~~~~~~~~~~g-~~~~l~~~YG~TE~~~~~~~~~~~----------~~~~~svG~p~pg~~v~i~d~--------- 408 (614)
T PRK08180 349 DVWDRLDRVAEATCG-ERIRMMTGLGMTETAPSATFTTGP----------LSRAGNIGLPAPGCEVKLVPV--------- 408 (614)
T ss_pred HHHHHHHHHHHhhcC-CCceeeeeecccccCCceEecccc----------cCCCCcccCccCCcEEEEecC---------
Confidence 999999875311 12 246799999999998765543211 112478999999999999884
Q ss_pred CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEE----E-CCeEEEEecCCCeEEE-CCeeec--
Q 037878 853 GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRI----I-DGKFFITGRIKDLIIV-AGRNVY-- 924 (2280)
Q Consensus 853 G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~----~-dG~l~~~GR~dd~IKi-~G~rI~-- 924 (2280)
|..|||+|+||+++.|||++|+.|++.|.. +|||||||+|++ + ||+++|+||+||+||+ +|++|+
T Consensus 409 ~~~GEi~vrg~~v~~GY~~~p~~t~~~~~~-------dgw~~TGDlg~~~~~~d~~g~l~i~GR~~d~i~~~~G~~i~~~ 481 (614)
T PRK08180 409 GGKLEVRVKGPNVTPGYWRAPELTAEAFDE-------EGYYRSGDAVRFVDPADPERGLMFDGRIAEDFKLSSGTWVSVG 481 (614)
T ss_pred CCCcEEEEecCccchhhcCChhHhHhhccc-------CCceeccceEEecCCcCCCCceEEecchhhhEEcCCCcEecch
Confidence 346999999999999999999999998853 489999999999 3 6899999999999996 798777
Q ss_pred hHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecC--------------CCCCCHHHHHHH
Q 037878 925 SADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRD--------------GKPVDKDVIENI 990 (2280)
Q Consensus 925 ~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~--------------~~~~~~~l~~~l 990 (2280)
+.|||.++.+||.|.+ |+|++.+++.+ +++++..... .....+++.+.+
T Consensus 482 p~Eie~~l~~~p~V~~---a~V~g~~~~~~--------------~a~V~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~ 544 (614)
T PRK08180 482 PLRARAVSAGAPLVQD---VVITGHDRDEI--------------GLLVFPNLDACRRLAGLLADASLAEVLAHPAVRAAF 544 (614)
T ss_pred hhhHHHHhhcCchhhe---EEEEcCCCCce--------------EEEEEcCHHHHHHHHhhcccCCHHHHhcCHHHHHHH
Confidence 7889999999999976 88998776432 2222221110 001235678888
Q ss_pred HHHHHHhcCc----ceeEEEEecCCCccCCC------CcccchHHHHHHhhcCCCC
Q 037878 991 KTRVVEEHGV----TVASVKLIKPRTMSKTT------SGKIKRFECLKQFVDGTLN 1036 (2280)
Q Consensus 991 ~~~l~~~~~~----~~~~~~lv~~~~lP~t~------sGKvdR~~L~~~~~~~~~~ 1036 (2280)
++.|...... ...+..++.++++|+|. +||+.|+++.+.|++...+
T Consensus 545 ~~~l~~~~~~~~~~~~~p~~~~~~~~~p~~~~gk~t~~~~~~R~~~~~~y~~~i~~ 600 (614)
T PRK08180 545 RERLARLNAQATGSSTRVARALLLDEPPSLDAGEITDKGYINQRAVLARRAALVEA 600 (614)
T ss_pred HHHHHHHHhhccccHhheeEEEEecCCCCCccCccCccccccHHHHHHHhHHHHHH
Confidence 8887764310 01344455557788654 5678889998888776543
No 66
>PLN02430 long-chain-fatty-acid-CoA ligase
Probab=100.00 E-value=1.5e-51 Score=560.73 Aligned_cols=512 Identities=20% Similarity=0.218 Sum_probs=366.9
Q ss_pred CCCCCHHHHHHhhccccccCCceEEEEEc---CCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHh
Q 037878 466 PELSSLDGYLKHWGTHRITQKKTLFTWIN---EEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLD 542 (2280)
Q Consensus 466 ~~~~tl~~~l~~~a~~~~~~d~~A~~~~~---~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e 542 (2280)
++..|+.+++++.+.+. |+++|+.+.. .....++.+||+||.++++++|+.|.+. |+++||+|+|+++|++|
T Consensus 39 ~~~~t~~~~~~~~~~~~--p~~~al~~~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~---Gv~~gd~V~i~~~n~~e 113 (660)
T PLN02430 39 SDITTAWDIFSKSVEKY--PDNKMLGWRRIVDGKVGPYMWKTYKEVYEEVLQIGSALRAS---GAEPGSRVGIYGSNCPQ 113 (660)
T ss_pred CCCCCHHHHHHHHHHhC--CCCceEEEEecCCCCCCCcEEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHH
Confidence 56779999999888774 7899987542 1112235689999999999999999998 99999999999999999
Q ss_pred HHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch-hhccC--CCCCCCc-cccccccc--
Q 037878 543 FVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS-AVRVG--SWPNLPW-LHTDSWVK-- 616 (2280)
Q Consensus 543 ~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~-~~~~~--~~~~~~~-~~~~~~~~-- 616 (2280)
|++++|||+++|+++||+++..+.++ +.++++++++++++++..... .+... ..+.+.. +..+....
T Consensus 114 w~~~~lA~~~~G~v~vpl~~~~~~~~-------l~~il~~~~~~~v~~~~~~~~~~~~~~~~~~~~l~~ii~~~~~~~~~ 186 (660)
T PLN02430 114 WIVAMEACAAHSLICVPLYDTLGPGA-------VDYIVDHAEIDFVFVQDKKIKELLEPDCKSAKRLKAIVSFTSVTEEE 186 (660)
T ss_pred HHHHHHHHHHcCCeEEEeccCCCHHH-------HHHHHhccCCCEEEECHHHHHHHHhhhcccCCCceEEEEECCCChHH
Confidence 99999999999999999999999888 889999999999999764321 11100 0011111 11110000
Q ss_pred ---------------cccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH-----cCCCCC
Q 037878 617 ---------------NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR-----YKSTSK 676 (2280)
Q Consensus 617 ---------------~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~-----~~~~~~ 676 (2280)
..............+..++|+++|+|||||||.||||++||+|+++.+...... ..++++
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~iiyTSGTTG~PKGV~lth~~~~~~~~~~~~~~~~~~~~~~~~ 266 (660)
T PLN02430 187 SDKASQIGVKTYSWIDFLHMGKENPSETNPPKPLDICTIMYTSGTSGDPKGVVLTHEAVATFVRGVDLFMEQFEDKMTHD 266 (660)
T ss_pred hhhhhcCCcEEEEHHHHHHhhccCCCCCCCcCcCceEEEEECCCCCCCCCEEEeecHHHHHHHHHHHhhccccccCCCCC
Confidence 000000001111223468999999999999999999999999998887765432 146789
Q ss_pred cEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccccc----
Q 037878 677 TVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDK---- 752 (2280)
Q Consensus 677 d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~---- 752 (2280)
|++++++|++|.++.... +.++..|++++++.. ++..+.+.+.+.++|++.++|.+++.+.+........
T Consensus 267 d~~ls~lPl~H~~~~~~~-~~~l~~G~~i~~~~~-----~~~~l~~~l~~~~pt~~~~vP~~~~~l~~~i~~~~~~~~~~ 340 (660)
T PLN02430 267 DVYLSFLPLAHILDRMIE-EYFFRKGASVGYYHG-----DLNALRDDLMELKPTLLAGVPRVFERIHEGIQKALQELNPR 340 (660)
T ss_pred CEEEEeCcHHHHHHHHHH-HHHHHcCCEEEEeCC-----ChhhHHHHHHHhCCcEEEecHHHHHHHHHHHHHHHhccCHH
Confidence 999999999999998654 456788988877642 6778999999999999999999998876543211000
Q ss_pred -------------------------ccccC----------C-CCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccc
Q 037878 753 -------------------------VRSFD----------L-SSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPG 796 (2280)
Q Consensus 753 -------------------------~~~~~----------l-~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~ 796 (2280)
....+ + +++|.+++||+++++++.+ |.+.+ ..+.++++
T Consensus 341 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~l~~~~i~~~~G~~lr~~~~gga~l~~~~~~-~~~~~-----~~~~i~~~ 414 (660)
T PLN02430 341 RRLIFNALYKYKLAWMNRGYSHKKASPMADFLAFRKVKAKLGGRLRLLISGGAPLSTEIEE-FLRVT-----SCAFVVQG 414 (660)
T ss_pred HHHHHHHHHHHHHHHHhcCCCCCCcchhHHHHHHHHHHHHhCCeEEEEEECCCCCCHHHHH-HHHHh-----cCCCeeee
Confidence 00001 1 6899999999999999754 44443 24569999
Q ss_pred cCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEc-CCCCcccCCCCCeeEEEEcCCCcccccCCCchh
Q 037878 797 YGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVN-PETSEEIGEPGKEGEVWISSPSAGIGYWGREEL 875 (2280)
Q Consensus 797 YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd-~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~ 875 (2280)
||+||++..+++..... ....|++|+|.|+++++|+| ++++....+.+..|||+|+||+++.|||++|+.
T Consensus 415 YG~TE~~~~~~~~~~~~---------~~~~gsvG~p~~~~evki~d~~~~g~~~~~~~~~GEi~vrg~~v~~GY~~~~e~ 485 (660)
T PLN02430 415 YGLTETLGPTTLGFPDE---------MCMLGTVGAPAVYNELRLEEVPEMGYDPLGEPPRGEICVRGKCLFSGYYKNPEL 485 (660)
T ss_pred cchhhhhhceEeecccc---------CCCCCCccCCCCceEEEEEEcCCcCcccCCCCCcceEEecCCCccccccCChHH
Confidence 99999987665432111 11247899999999999987 444333345667899999999999999999999
Q ss_pred hHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCcCCceeEEEeccccc
Q 037878 876 SQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEV 953 (2280)
Q Consensus 876 t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~ 953 (2280)
|+++|. +|||||||+|+++ ||+|+|+||+||+||+ +|++|+|.|||++|.+||.|.+ |+|++...
T Consensus 486 t~~~~~--------dGw~~TGDig~~d~dG~l~i~gR~kd~ik~~~G~~V~p~~IE~~l~~~p~V~~---~~V~G~~~-- 552 (660)
T PLN02430 486 TEEVMK--------DGWFHTGDIGEILPNGVLKIIDRKKNLIKLSQGEYVALEYLENVYGQNPIVED---IWVYGDSF-- 552 (660)
T ss_pred hhhhhh--------ccceeccceEEECCCCcEEEEEcccccEEcCCCcEEchHHHHHHHhcCCCeeE---EEEEecCC--
Confidence 999984 3899999999997 9999999999999998 6999999999999999999975 77777221
Q ss_pred cccccccccCCCCceEEEEEEEec--------CCC-------CCCHHHHHHHHHHHHHh-----cCcceeEEEEe-cCCC
Q 037878 954 LSTKGISVSDGSDQVGLVVIAEVR--------DGK-------PVDKDVIENIKTRVVEE-----HGVTVASVKLI-KPRT 1012 (2280)
Q Consensus 954 ~~~~~~~~~~~~~~~~~vv~~~~~--------~~~-------~~~~~l~~~l~~~l~~~-----~~~~~~~~~lv-~~~~ 1012 (2280)
....+++++. ... .+. ....++.+.+.+.+.+. +.....+..+. ..+.
T Consensus 553 ----------~~~~~A~vv~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~~~~l~~~e~i~~~~l~~~~ 621 (660)
T PLN02430 553 ----------KSMLVAVVVP-NEENTNKWAKDNGFTGSFEELCSLPELKEHILSELKSTAEKNKLRGFEYIKGVILETKP 621 (660)
T ss_pred ----------cceEEEEEEc-CHHHHHHHHHhCCCCCCHHHHhcCHHHHHHHHHHHHHHHHHhCCCCceeeeEEEEECCC
Confidence 0112223322 110 000 01123444444444332 33222222222 2233
Q ss_pred c-----cCCCCcccchHHHHHHhhcCC
Q 037878 1013 M-----SKTTSGKIKRFECLKQFVDGT 1034 (2280)
Q Consensus 1013 l-----P~t~sGKvdR~~L~~~~~~~~ 1034 (2280)
+ .+|+++|+.|+.+.+.|.+..
T Consensus 622 ~~~~~g~lT~t~K~~R~~i~~~y~~~i 648 (660)
T PLN02430 622 FDVERDLVTATLKKRRNNLLKYYQVEI 648 (660)
T ss_pred CCCcCCcCChhhhhhhHHHHHHHHHHH
Confidence 3 489999999999999987654
No 67
>PRK08633 2-acyl-glycerophospho-ethanolamine acyltransferase; Validated
Probab=100.00 E-value=6.2e-52 Score=609.18 Aligned_cols=511 Identities=21% Similarity=0.269 Sum_probs=390.3
Q ss_pred CCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHH
Q 037878 466 PELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVD 545 (2280)
Q Consensus 466 ~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~v 545 (2280)
+...++.+++++.+++ +|+++|+... .+ +++||+||+++++++|+.|.+ ++++||+|+++++|++++++
T Consensus 612 ~~~~~l~~~~~~~a~~--~p~~~a~~~~--~~---~~~Ty~el~~~~~~~a~~L~~----~~~~g~~V~i~~~n~~~~~~ 680 (1146)
T PRK08633 612 EALPPLAEAWIDTAKR--NWSRLAVADS--TG---GELSYGKALTGALALARLLKR----ELKDEENVGILLPPSVAGAL 680 (1146)
T ss_pred CCCCCHHHHHHHHHHh--cCCCcEEEcC--CC---CcCcHHHHHHHHHHHHHHHHH----hCCCCCeEEEECCCchHHHH
Confidence 3456788999888876 4899998632 22 479999999999999999975 48999999999999999999
Q ss_pred HHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC----CCCC-CCcccccccccccc-
Q 037878 546 AFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG----SWPN-LPWLHTDSWVKNSK- 619 (2280)
Q Consensus 546 a~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~- 619 (2280)
++|||+++|++++|+++..+.++ +.+++++++++.++++....+.+... ..+. ...+..++......
T Consensus 681 ~~la~~~~G~v~v~l~~~~~~~~-------~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 753 (1146)
T PRK08633 681 ANLALLLAGKVPVNLNYTASEAA-------LKSAIEQAQIKTVITSRKFLEKLKNKGFDLELPENVKVIYLEDLKAKISK 753 (1146)
T ss_pred HHHHHHHcCCEEEEeCCCcCHHH-------HHHHHHHcCCCEEEEcHHHHHHHhccCCchhcccCceEEEeehhccccch
Confidence 99999999999999999999888 88999999999999987654433210 0010 01111111100000
Q ss_pred -----cc-----ccc---cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCch
Q 037878 620 -----NL-----LAE---NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQY 686 (2280)
Q Consensus 620 -----~~-----~~~---~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~ 686 (2280)
.. .+. .........++|+++|+|||||||.||||++||+++.+.+......++..++|++++.+|++
T Consensus 754 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~ 833 (1146)
T PRK08633 754 VDKLTALLAARLLPARLLKRLYGPTFKPDDTATIIFSSGSEGEPKGVMLSHHNILSNIEQISDVFNLRNDDVILSSLPFF 833 (1146)
T ss_pred hHHHHHHHHhccCCHHHHHhhccCCCCCCCEEEEEECCCCCCCCceEEechHHHHHHHHHHHHhcCCCCCCEEEEcCcHH
Confidence 00 000 00001345689999999999999999999999999999998888888999999999999999
Q ss_pred hhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEE
Q 037878 687 HDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMV 766 (2280)
Q Consensus 687 h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~ 766 (2280)
|.+++...++.++..|+++++.+. . .++..+++.++++++|++..+|++++.+.+.... .+.+++++|.+++
T Consensus 834 h~~g~~~~~~~~l~~g~~~v~~~~-~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~lr~~~~ 905 (1146)
T PRK08633 834 HSFGLTVTLWLPLLEGIKVVYHPD-P--TDALGIAKLVAKHRATILLGTPTFLRLYLRNKKL-----HPLMFASLRLVVA 905 (1146)
T ss_pred HHHhHHHHHHHHHHCCCEEEEeCC-C--CCHHHHHHHHHHcCCeEEEecHHHHHHHHhcccc-----CcccCCCeeeEEE
Confidence 999998778999999999887653 2 3889999999999999999999999887754322 2256889999999
Q ss_pred ecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCC
Q 037878 767 AAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETS 846 (2280)
Q Consensus 767 gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~ 846 (2280)
|||++++++.+++.+.+ +++++|.||+||++.+++.............+.....+++|+|+||++++|+|++++
T Consensus 906 gg~~~~~~~~~~~~~~~------g~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~vG~p~~~~~v~i~d~~~~ 979 (1146)
T PRK08633 906 GAEKLKPEVADAFEEKF------GIRILEGYGATETSPVASVNLPDVLAADFKRQTGSKEGSVGMPLPGVAVRIVDPETF 979 (1146)
T ss_pred cCCcCCHHHHHHHHHHh------CCCeecccccccCcceEEEecCcccccccccccCCCCCCccccCCCCEEEEEcCCCC
Confidence 99999999999998874 467999999999987765432211000000001123578999999999999998765
Q ss_pred cccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeech
Q 037878 847 EEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYS 925 (2280)
Q Consensus 847 ~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~ 925 (2280)
.+ +|+|+.|||+++|++++.||+|+|+.|++.|.+ .++++||+|||+|+++ ||.++++||+||+||++|+||+|
T Consensus 980 ~~-~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~----~~~~~~~~TGD~~~~~~~g~l~~~gR~~d~i~~~G~~v~~ 1054 (1146)
T PRK08633 980 EE-LPPGEDGLILIGGPQVMKGYLGDPEKTAEVIKD----IDGIGWYVTGDKGHLDEDGFLTITDRYSRFAKIGGEMVPL 1054 (1146)
T ss_pred cc-CCCCCceEEEEcCCCccccccCCccchHHHhhc----CCCCCeEECCCEEEEcCCceEEEEecccchhhhCcEEECH
Confidence 44 479999999999999999999999999998864 2466999999999997 99999999999999999999999
Q ss_pred HHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEE
Q 037878 926 ADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASV 1005 (2280)
Q Consensus 926 ~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~ 1005 (2280)
.|||++|.+||++. ..+++|++++++..+ +.+.+++ .. +....+++.+.++++..+.++.| .
T Consensus 1055 ~eiE~~l~~~~~~~-~~~~~v~~~~~~~~g----------~~~~~~v--~~--~~~~~~~l~~~~~~~~l~~~~~P---~ 1116 (1146)
T PRK08633 1055 GAVEEELAKALGGE-EVVFAVTAVPDEKKG----------EKLVVLH--TC--GAEDVEELKRAIKESGLPNLWKP---S 1116 (1146)
T ss_pred HHHHHHHHhccCCC-CceEEEEeccCCCCC----------cEEEEEE--ec--CccCHHHHHHHHHhcCCCcccCC---c
Confidence 99999999999642 235888888876433 1222222 21 22223455555544222234444 4
Q ss_pred EEecCCCccCCCCcccchHHHHHHhh
Q 037878 1006 KLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 1006 ~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.++.++++|+|++||+||++|++...
T Consensus 1117 ~i~~~~~iP~t~~GKi~r~~L~~~~~ 1142 (1146)
T PRK08633 1117 RYFKVEALPLLGSGKLDLKGLKELAL 1142 (1146)
T ss_pred EEEEecCcCCCCCCCCcHHHHHHHHH
Confidence 45566999999999999999987643
No 68
>PRK06145 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-51 Score=548.07 Aligned_cols=489 Identities=21% Similarity=0.281 Sum_probs=383.3
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+.+++++++. |+++|+.+.+ +.+||.||.++++++|..|.+. |+++|++|+++++|++++++++|
T Consensus 2 ~~~~~~~~~~~~~~--~~~~a~~~~~------~~~ty~el~~~v~~~a~~L~~~---g~~~~~~v~i~~~~~~~~~~~~l 70 (497)
T PRK06145 2 FNLSASIAFHARRT--PDRAALVYRD------QEISYAEFHQRILQAAGMLHAR---GIGQGDVVALLMKNSAAFLELAF 70 (497)
T ss_pred ccHHHHHHHHHHHC--CCceEEEECC------cceeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHH
Confidence 35678888888764 8999987642 4799999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccc---ccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNS---KNLLAEN 625 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~ 625 (2280)
||+++|++++|+++..+.++ +..++++++++.++++.+........ ......+...... .......
T Consensus 71 a~~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~~i~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~ 139 (497)
T PRK06145 71 AASYLGAVFLPINYRLAADE-------VAYILGDAGAKLLLVDEEFDAIVALE----TPKIVIDAAAQADSRRLAQGGLE 139 (497)
T ss_pred HHHhcCcEEEecccccCHHH-------HHHHHHhcCCcEEEEccchhhhhhcc----cceEEecCcccchhHHHhccCCC
Confidence 99999999999999998887 88999999999999876543221100 0001111000000 0000000
Q ss_pred ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceE
Q 037878 626 VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTA 705 (2280)
Q Consensus 626 ~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~ 705 (2280)
........++++++++|||||||.||||++||+++...+......++...+++++..+|++|.+++....+.++..|+++
T Consensus 140 ~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~ 219 (497)
T PRK06145 140 IPPQAAVAPTDLVRLMYTSGTTDRPKGVMHSYGNLHWKSIDHVIALGLTASERLLVVGPLYHVGAFDLPGIAVLWVGGTL 219 (497)
T ss_pred CCCCCCCCccceEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhhCCCCCcEEEEecCchhHhHHHHHHHHHHhccCEE
Confidence 11122356789999999999999999999999999877766677788899999999999999998877677888999998
Q ss_pred EEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcC
Q 037878 706 ILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRP 785 (2280)
Q Consensus 706 vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~ 785 (2280)
++.+. .++..+++.++++++|++.++|+++..++..... ...+++++|.+++|||++++++++++.+.+
T Consensus 220 ~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~ll~~~~~-----~~~~~~~l~~~~~gG~~~~~~~~~~~~~~~-- 288 (497)
T PRK06145 220 RIHRE----FDPEAVLAAIERHRLTCAWMAPVMLSRVLTVPDR-----DRFDLDSLAWCIGGGEKTPESRIRDFTRVF-- 288 (497)
T ss_pred EECCc----CCHHHHHHHHHHhCCeEEEehHHHHHHHHcCCCc-----cccccccceEEEecCCCCCHHHHHHHHHHc--
Confidence 87653 3899999999999999999999999888754322 124578999999999999999999998875
Q ss_pred CCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCc
Q 037878 786 FGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSA 865 (2280)
Q Consensus 786 ~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v 865 (2280)
++..+++.||+||++..++....... ....+++|+|+++++++++|+++ ..++.|+.|||+++|+.+
T Consensus 289 ---~~~~v~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~i~~~~~--~~~~~~~~Gel~v~g~~~ 355 (497)
T PRK06145 289 ---TRARYIDAYGLTETCSGDTLMEAGRE--------IEKIGSTGRALAHVEIRIADGAG--RWLPPNMKGEICMRGPKV 355 (497)
T ss_pred ---CCCceEEeecCcccCCcceeccCccc--------cccCCCcccCCCCceEEEECCCC--CCCCCCCceEEEEECcch
Confidence 45789999999999876554321110 11236789999999999999765 345789999999999999
Q ss_pred ccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCcee
Q 037878 866 GIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCC 944 (2280)
Q Consensus 866 ~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~a 944 (2280)
+.||+++++.|++.|.+ +||+|||+++++ ||.++++||+||+||++|++|+|.|||++|.++|+|.+ +
T Consensus 356 ~~Gy~~~~~~~~~~~~~--------~~~~TGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~IE~~l~~~~~v~~---~ 424 (497)
T PRK06145 356 TKGYWKDPEKTAEAFYG--------DWFRSGDVGYLDEEGFLYLTDRKKDMIISGGENIASSEVERVIYELPEVAE---A 424 (497)
T ss_pred hhhhcCChHHHHHHHhC--------CCeeccceEEEcCCCcEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeE---E
Confidence 99999999999999853 799999999997 99999999999999999999999999999999999865 8
Q ss_pred EEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccch
Q 037878 945 AVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKR 1023 (2280)
Q Consensus 945 aVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR 1023 (2280)
+|++.+++..+ +....+++ ..++. ....++.+.+++++.. +++| ..++.+++||+|++||++|
T Consensus 425 ~v~~~~~~~~~----------~~~~~~v~--~~~~~~~~~~~l~~~~~~~l~~-~~~p---~~i~~v~~iP~t~~GKi~r 488 (497)
T PRK06145 425 AVIGVHDDRWG----------ERITAVVV--LNPGATLTLEALDRHCRQRLAS-FKVP---RQLKVRDELPRNPSGKVLK 488 (497)
T ss_pred EEEecCCCccC----------ceEEEEEE--ECCCCCCCHHHHHHHHHHhhhc-CCCC---CEEEEeccCCCCCcccccH
Confidence 88887665332 22222222 22222 2235667777777664 4444 4555669999999999999
Q ss_pred HHHHHHh
Q 037878 1024 FECLKQF 1030 (2280)
Q Consensus 1024 ~~L~~~~ 1030 (2280)
++|++++
T Consensus 489 ~~l~~~~ 495 (497)
T PRK06145 489 RVLRDEL 495 (497)
T ss_pred HHHHHHh
Confidence 9998875
No 69
>TIGR03208 cyc_hxne_CoA_lg cyclohexanecarboxylate-CoA ligase. Members of this protein family are cyclohexanecarboxylate-CoA ligase. This enzyme prepares the aliphatic ring compound, cyclohexanecarboxylate, for dehydrogenation and then degradation by a pathway also used in benzoyl-CoA degradation in Rhodopseudomonas palustris.
Probab=100.00 E-value=2.9e-51 Score=551.46 Aligned_cols=494 Identities=22% Similarity=0.314 Sum_probs=379.2
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++.++. .|+++|+.+.++.....+.+||+||+++++++|++|++. |+++||+|+++++|+.++++++|
T Consensus 22 ~~~~~~~~~~~~~--~p~~~a~~~~~~~~~~~~~~Ty~eL~~~~~~~a~~L~~~---g~~~g~~V~i~~~~~~~~~~~~l 96 (538)
T TIGR03208 22 RTINDHFDAAVAN--CPDKPALTAYRDGHGAVRRFSYRELDCRVDRIAVGLARL---GVGRGDVVSFQLPNRWEFTALYL 96 (538)
T ss_pred CcHHHHHHHHHHH--CCCceEEEeecccCCCcceecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHH
Confidence 5788889888876 489999886533222236899999999999999999988 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh-----hc--cCCCCCCC-cccccc-----cc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA-----VR--VGSWPNLP-WLHTDS-----WV 615 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~-----~~--~~~~~~~~-~~~~~~-----~~ 615 (2280)
||+++|+++||+++..+.++ +.++++++++++++++...... .. ....+... .+..+. +.
T Consensus 97 a~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (538)
T TIGR03208 97 ACARIGAVLNPLMPIFRERE-------LSFMLNHADSKVFVVPSVFRGFDHAAMARELQSKLPALRQVVVIDGDGDDSFD 169 (538)
T ss_pred HHHhcCEEEeccCcccCHHH-------HHHHHHhcCCeEEEEccccccccHHHHHHHHhccCCcceEEEEecCCCCcCHH
Confidence 99999999999999998887 8899999999999997653210 00 00011110 000000 00
Q ss_pred ---cccc-ccccc--cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhh
Q 037878 616 ---KNSK-NLLAE--NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDM 689 (2280)
Q Consensus 616 ---~~~~-~~~~~--~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 689 (2280)
.... ..... .........++++++|+|||||||.||||+++|+++...+......+++..++++++++|++|.+
T Consensus 170 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~ 249 (538)
T TIGR03208 170 RVLMTPERDDTPDAAAILAGPRPSPDDVTQLIYTSGTTGEPKGVMHTANTLFSNIHPYAERLELGGGDVILMASPMAHQT 249 (538)
T ss_pred HHhhccccccccccccccccCCCCCCCeEEEEECCCCCCCCcEEEeehHHHHHHHHHHHhhcCCCCCCeEEEeCCchhHH
Confidence 0000 00000 00011235679999999999999999999999999999988888888899999999999999999
Q ss_pred hHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecC
Q 037878 690 GLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAE 769 (2280)
Q Consensus 690 gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe 769 (2280)
+++..++.+++.|+++++.+ ..++..+++.++++++|++.++|..+..+....... ..+++++|.+++||+
T Consensus 250 g~~~~~~~~l~~g~~~~~~~----~~~~~~~~~~l~~~~vt~~~~~p~~~~~l~~~~~~~-----~~~~~~l~~~~~gG~ 320 (538)
T TIGR03208 250 GFMYGLMMPLILNATAVLQD----IWNPARAAELIRETGVTFTMASTPFLTDLCRAVKES-----GAPVPSLFTFLCAGA 320 (538)
T ss_pred HHHHHHHHHHHcCCEEEecC----ccCHHHHHHHHHHhCCeEEecCHHHHHHHHhchhcc-----CCCCCcceEEEEcCC
Confidence 98888999999999988864 238999999999999999999999888776543221 145789999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCccc
Q 037878 770 PVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEI 849 (2280)
Q Consensus 770 ~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~ 849 (2280)
++++++.+++.+.+ ++.++|.||+||++.+++...... ......++|+|+|+++++|+|+++ ..
T Consensus 321 ~~~~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~--------~~~~~~~~G~~~~g~~v~i~~~~~--~~ 384 (538)
T TIGR03208 321 PIPGILVERAWELL------GALIVSAWGMTENGAVTVTEPDDA--------LEKASTTDGRPLPGVEVKVIDANG--AK 384 (538)
T ss_pred CCCHHHHHHHHHHc------CCeEEeeeccCcCCCccccCcccc--------hhhccCcccccCCCCEEEEECCCC--CC
Confidence 99999999988764 467999999999987655332111 011235689999999999999775 34
Q ss_pred CCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHH
Q 037878 850 GEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADV 928 (2280)
Q Consensus 850 ~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EI 928 (2280)
++.|+.|||+|+|++++.||+++|+.|+. .+++||+|||+|+++ ||.++++||+||+||++|++|+|.||
T Consensus 385 ~~~g~~Gel~v~g~~~~~gy~~~~~~~~~---------~~~~~~~TGD~~~~~~~g~l~~~gR~~~~i~~~G~~v~p~eI 455 (538)
T TIGR03208 385 LSQGETGRLLVRGCSNFGGYLKRPHLNST---------DAEGWFDTGDLAFQDAEGYIRINGRSKDVIIRGGENIPVVEI 455 (538)
T ss_pred CcCCCCcEEEEecCcccccccCCcccccc---------cCCCceeccceEEECCCCcEEEEeccCceEEECCEEECHHHH
Confidence 57999999999999999999999987642 135899999999997 99999999999999999999999999
Q ss_pred HHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC-HHHHHHHHH-HHHHhcCcceeEEE
Q 037878 929 EKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-KDVIENIKT-RVVEEHGVTVASVK 1006 (2280)
Q Consensus 929 E~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-~~l~~~l~~-~l~~~~~~~~~~~~ 1006 (2280)
|++|.+||+|.+ ++|++.+++..+ ....+++. ...+...+ .++.+.+++ ++.. ++.|. .
T Consensus 456 E~~l~~~~~v~~---~~v~~~~~~~~g----------~~~~a~v~--~~~~~~~~~~~l~~~~~~~~l~~-~~~P~---~ 516 (538)
T TIGR03208 456 ENLLYQHPAVAQ---VAIVAYPDERLG----------ERACAVVV--PKPGCTLDFAAMVAFLKAQKVAL-QYIPE---R 516 (538)
T ss_pred HHHHhcCcceee---EEEEeccCCCCC----------ceEEEEEE--ECCCCCCCHHHHHHHHHhcchhh-ccCCc---E
Confidence 999999999875 888887765432 22222322 22222222 456666664 3443 44443 4
Q ss_pred EecCCCccCCCCcccchHHHH
Q 037878 1007 LIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 1007 lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
++.++++|+|++||++|++|+
T Consensus 517 i~~v~~iP~t~~gKv~r~~L~ 537 (538)
T TIGR03208 517 LEVVDALPATPAGKIQKFRLR 537 (538)
T ss_pred EEEeccCCCCCccccchHhhc
Confidence 555699999999999999864
No 70
>PLN02330 4-coumarate--CoA ligase-like 1
Probab=100.00 E-value=2e-51 Score=553.70 Aligned_cols=503 Identities=22% Similarity=0.280 Sum_probs=380.0
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
.++..++.+++.+.+++. |+++|+.... ++ +.+||+||.++++++|+.|++. |+++||+|+++++|+++++
T Consensus 24 ~~~~~~~~~~l~~~a~~~--p~~~a~~~~~-~~---~~~Ty~~l~~~~~~la~~L~~~---g~~~g~~V~i~~~~~~~~~ 94 (546)
T PLN02330 24 VPDKLTLPDFVLQDAELY--ADKVAFVEAV-TG---KAVTYGEVVRDTRRFAKALRSL---GLRKGQVVVVVLPNVAEYG 94 (546)
T ss_pred CCCCCcHHHHHhhhhhcC--CCccEEEecC-CC---CcccHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCchHHH
Confidence 345678899998888774 8899986432 22 5799999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccc--------ccc
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDS--------WVK 616 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 616 (2280)
++++||+++|++++|+++..+.++ +.++++++++++++++........... ...+..+. +..
T Consensus 95 ~~~lA~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~~---~~~i~~~~~~~~~~~~~~~ 164 (546)
T PLN02330 95 IVALGIMAAGGVFSGANPTALESE-------IKKQAEAAGAKLIVTNDTNYGKVKGLG---LPVIVLGEEKIEGAVNWKE 164 (546)
T ss_pred HHHHHHHHhCcEeccCCccCCHHH-------HHHHHHhcCCeEEEEccchhhhHhhcC---CcEEEecCCCCCCcccHHH
Confidence 999999999999999999998887 889999999999999876544332111 01111000 000
Q ss_pred cccccc-cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC--CCCCcEEEEEcCchhhhhHHH
Q 037878 617 NSKNLL-AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK--STSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 617 ~~~~~~-~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~--~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
...... ...........++++++|+|||||||.||||+++|+++...+........ ....++.+.++|++|.+++..
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~ 244 (546)
T PLN02330 165 LLEAADRAGDTSDNEEILQTDLCALPFSSGTTGISKGVMLTHRNLVANLCSSLFSVGPEMIGQVVTLGLIPFFHIYGITG 244 (546)
T ss_pred HHhhccccCcccccccCCcccEEEEEeCCCCcCCCcEEEEehHHHHHHHHHHhhccCccccCceEEEEecChHHHHHHHH
Confidence 000000 00001122345789999999999999999999999999876643221111 123568899999999999887
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCC--CccEEEEecCCC
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLS--SMKFLMVAAEPV 771 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~--~Lr~l~~gGe~l 771 (2280)
.++.++..|+++++.+. .++..+++.++++++|.+..+|+++..+....... ..+++ ++|.+++||+++
T Consensus 245 ~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~-----~~~~~~~~l~~i~~~g~~l 315 (546)
T PLN02330 245 ICCATLRNKGKVVVMSR----FELRTFLNALITQEVSFAPIVPPIILNLVKNPIVE-----EFDLSKLKLQAIMTAAAPL 315 (546)
T ss_pred HHHHHhhcCCEEEEecc----cCHHHHHHHHHHcCCeeeecCCHHHHHHHhCcccc-----ccccchheeeeEEEcCCcC
Confidence 88899999999888653 28899999999999999999999888876532211 12233 479999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCC
Q 037878 772 RQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGE 851 (2280)
Q Consensus 772 ~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p 851 (2280)
++++.++|.+.+ +++.+++.||+||++.++......... .+....+++|.|+||++++|+|++++ ..+|
T Consensus 316 ~~~~~~~~~~~~-----~~~~~~~~YG~tE~~~~~~~~~~~~~~-----~~~~~~~~vG~~~~~~~v~i~d~~~~-~~~p 384 (546)
T PLN02330 316 APELLTAFEAKF-----PGVQVQEAYGLTEHSCITLTHGDPEKG-----HGIAKKNSVGFILPNLEVKFIDPDTG-RSLP 384 (546)
T ss_pred CHHHHHHHHHHc-----CCCeEEecccccccccceecCCCcccc-----ccccccCccccccCCcEEEEEeCCCC-ccCC
Confidence 999999999875 467899999999997654322111100 01122367899999999999997655 4458
Q ss_pred CCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHH
Q 037878 852 PGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEK 930 (2280)
Q Consensus 852 ~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~ 930 (2280)
.|+.|||+|+|++++.||+|+++.+++.|.. ++||+|||+|+++ ||.++|+||+||+||++|+||+|.|||+
T Consensus 385 ~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-------~g~~~TGD~~~~~~dG~l~~~GR~~d~i~~~G~~v~~~~iE~ 457 (546)
T PLN02330 385 KNTPGELCVRSQCVMQGYYNNKEETDRTIDE-------DGWLHTGDIGYIDDDGDIFIVDRIKELIKYKGFQVAPAELEA 457 (546)
T ss_pred CCCceEEEEecchhhhhhccCccchhhhccC-------CCceecccEEEEeCCCcEEEEechHHhhhcCCEEECHHHHHH
Confidence 9999999999999999999999999887742 5899999999997 9999999999999999999999999999
Q ss_pred HHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEec
Q 037878 931 TVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIK 1009 (2280)
Q Consensus 931 ~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~ 1009 (2280)
+|.++++|.+ ++|++++++..+ ....+++.. .++. ...+++.+.+++++.. ++ .|..++.
T Consensus 458 ~l~~~~~v~~---~~v~~~~~~~~g----------~~~~a~v~~--~~~~~~~~~~l~~~~~~~l~~-~~---~p~~~~~ 518 (546)
T PLN02330 458 ILLTHPSVED---AAVVPLPDEEAG----------EIPAACVVI--NPKAKESEEDILNFVAANVAH-YK---KVRVVQF 518 (546)
T ss_pred HHHhCCchhe---EEEEeccccccC----------ceeEEEEEE--CCCCCCCHHHHHHHHHHhccc-cc---CceEEEE
Confidence 9999999875 888887765432 222223222 2222 2224556666665543 33 4444555
Q ss_pred CCCccCCCCcccchHHHHHHhhc
Q 037878 1010 PRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1010 ~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+++||+|.+||++|++|++++..
T Consensus 519 v~~iP~t~~GK~~r~~L~~~~~~ 541 (546)
T PLN02330 519 VDSIPKSLSGKIMRRLLKEKMLS 541 (546)
T ss_pred eccCCCCCCcceeHHHHHHHHHh
Confidence 69999999999999999988743
No 71
>PRK07638 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.8e-51 Score=545.13 Aligned_cols=480 Identities=16% Similarity=0.176 Sum_probs=376.7
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
+++.+.+++++++ .|+++|+.+.+ +++||.||.++++++|+.|.+. | .+||+|+|+++|++++++++|
T Consensus 1 ~~~~~~~~~~a~~--~p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~---~-~~~~~v~i~~~~~~~~~~~~l 68 (487)
T PRK07638 1 MGITKEYKKHASL--QPNKIAIKEND------RVLTYKDWFESVCKVANWLNEK---E-SKNKTIAILLENRIEFLQLFA 68 (487)
T ss_pred CChHHHHHHHHHh--CCCCeEEecCC------cEeeHHHHHHHHHHHHHHHHHh---C-CCCCEEEEEcCCCHHHHHHHH
Confidence 3567788888876 48999987532 4799999999999999999988 6 489999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+++|++++|+++..+.++ +..+++.++++.++++......+.. .....+..+.+....... .....
T Consensus 69 a~~~~G~~~v~l~~~~~~~~-------~~~~~~~~~~~~vi~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--~~~~~ 136 (487)
T PRK07638 69 GAAMAGWTCVPLDIKWKQDE-------LKERLAISNADMIVTERYKLNDLPD---EEGRVIEIDEWKRMIEKY--LPTYA 136 (487)
T ss_pred HHHHcCeEEEecCccCCHHH-------HHHHHHhCCCCEEEEecccccchhh---ccceEEEehhhhhhhhhc--ccccc
Confidence 99999999999999998887 7889999999999998654332221 111112222211110000 00011
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
......+++++|+|||||||.||||+++|++++..+......+++.++|+++...|++|+.++ ..++.++..|+++++.
T Consensus 137 ~~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~~~~~~l~~~~~l-~~~~~~l~~g~~~~~~ 215 (487)
T PRK07638 137 PIENVQNAPFYMGFTSGSTGKPKAFLRAQQSWLHSFDCNVHDFHMKREDSVLIAGTLVHSLFL-YGAISTLYVGQTVHLM 215 (487)
T ss_pred ccccCCCCcEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCcCCCCEEEEeecchHHHHH-HHHHHHHccCcEEEEc
Confidence 112235678999999999999999999999999998888888889999999999999999876 5678899999999886
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
+. .+|..+++.++++++|++.++|+++..+.+.. ....+.+.++++|+++++++.+++.+.+
T Consensus 216 ~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~---------~~~~~~~~~~~~G~~l~~~~~~~~~~~~----- 277 (487)
T PRK07638 216 RK----FIPNQVLDKLETENISVMYTVPTMLESLYKEN---------RVIENKMKIISSGAKWEAEAKEKIKNIF----- 277 (487)
T ss_pred CC----CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCc---------CcCCceeEEEEcCCCCCHHHHHHHHHHc-----
Confidence 53 38999999999999999999999998887541 1133556678899999999999998875
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++++++|.||+||++.++...... . ....+++|+|+++++++|+|+++ ..+|+|+.|||+|+|+.++.|
T Consensus 278 ~~~~~~~~YG~tE~~~~~~~~~~~-~--------~~~~~~~G~~~~~~~~~i~d~~g--~~~~~g~~Gel~v~~~~~~~g 346 (487)
T PRK07638 278 PYAKLYEFYGASELSFVTALVDEE-S--------ERRPNSVGRPFHNVQVRICNEAG--EEVQKGEIGTVYVKSPQFFMG 346 (487)
T ss_pred CCCeEEEEecCCccCceEEecccc-c--------CCCCCCCCcccCCcEEEEECCCC--CCCCCCCCeEEEEecccceee
Confidence 478899999999998765543211 0 11246789999999999999875 345799999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEE
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVI 947 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv 947 (2280)
|+++++.+.+.+. ++||+|||+++++ ||.++++||+||+||++|++|+|.|||++|.++|+|.+ |+|+
T Consensus 347 y~~~~~~~~~~~~--------~g~~~TGDl~~~d~~g~l~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~~v~~---~~v~ 415 (487)
T PRK07638 347 YIIGGVLARELNA--------DGWMTVRDVGYEDEEGFIYIVGREKNMILFGGINIFPEEIESVLHEHPAVDE---IVVI 415 (487)
T ss_pred ecCCHHHHhhhcc--------CCcEecCccEeEcCCCeEEEEecCCCeEEeCCEEECHHHHHHHHHhCCCeee---EEEE
Confidence 9999988765432 4899999999997 99999999999999999999999999999999999875 8888
Q ss_pred eccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 948 GVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
+.+++..+ ....+++. . .....++.+.+++.+.. +++|. .++.+++||+|++||++|++|+
T Consensus 416 ~~~~~~~g----------~~~~~~v~--~---~~~~~~l~~~~~~~l~~-~~~p~---~i~~v~~iP~t~~GKv~r~~L~ 476 (487)
T PRK07638 416 GVPDSYWG----------EKPVAIIK--G---SATKQQLKSFCLQRLSS-FKIPK---EWHFVDEIPYTNSGKIARMEAK 476 (487)
T ss_pred ecCchhcC----------CeeEEEEE--C---CCCHHHHHHHHHHHhhc-ccCCc---EEEEecccCCCCcccccHHHHH
Confidence 88775432 12222221 1 22335677778777765 55443 4445599999999999999998
Q ss_pred HHhhc
Q 037878 1028 KQFVD 1032 (2280)
Q Consensus 1028 ~~~~~ 1032 (2280)
+++.+
T Consensus 477 ~~~~~ 481 (487)
T PRK07638 477 SWIEN 481 (487)
T ss_pred HHHhc
Confidence 88654
No 72
>TIGR01734 D-ala-DACP-lig D-alanine--poly(phosphoribitol) ligase, subunit 1. This model represents the enzyme (also called D-alanine-D-alanyl carrier protein ligase) which activates D-alanine as an adenylate via the reaction D-ala + ATP - D-ala-AMP + PPi, and further catalyzes the condensation of the amino acid adenylate with the D-alanyl carrier protein (D-ala-ACP). The D-alanine is then further transferred to teichoic acid in the biosynthesis of lipoteichoic acid (LTA) and wall teichoic acid (WTA) in gram positive bacteria, both polysacchatides.
Probab=100.00 E-value=3.1e-51 Score=547.46 Aligned_cols=498 Identities=19% Similarity=0.250 Sum_probs=381.4
Q ss_pred HHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHH
Q 037878 471 LDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGC 550 (2280)
Q Consensus 471 l~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~ 550 (2280)
+.+.+++.+.. .|+++|+...+ +++||+||.++++++|+.|.+. |+++||+|+++++|+.++++++|||
T Consensus 2 ~~~~l~~~a~~--~p~~~a~~~~~------~~~ty~el~~~~~~~a~~L~~~---g~~~~~~V~i~~~~~~~~~~~~la~ 70 (502)
T TIGR01734 2 LIEAIQAFAET--YPQTIAYRYQG------QELTYQQLKEQSDRLAAFIQKR---ILPKKSPIIVYGHMEPHMLVAFLGS 70 (502)
T ss_pred HHHHHHHHHHH--CCCceEEEcCC------cEEeHHHHHHHHHHHHHHHHHh---CCCCCCeEEEEeCCCHHHHHHHHHH
Confidence 56778877776 47888886432 4799999999999999999998 8999999999999999999999999
Q ss_pred HHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccC
Q 037878 551 MRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFT 630 (2280)
Q Consensus 551 l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 630 (2280)
+++|++++|+++..+.++ +..+++..+++.++++........ ....+..+.... ..... .......
T Consensus 71 ~~~G~~~v~~~~~~~~~~-------~~~~~~~~~~~~ii~~~~~~~~~~-----~~~~~~~~~~~~-~~~~~-~~~~~~~ 136 (502)
T TIGR01734 71 IKSGHAYIPVDTSIPSER-------IEMIIEAAGPELVIHTAELSIDAV-----GTQIITLSALEQ-AETSG-GPVSFDH 136 (502)
T ss_pred HHhCCEEeCCCCcChHHH-------HHHHHHhcCCCEEEeccccccccc-----CCceEEchHhhh-hhhhc-CCccccc
Confidence 999999999999999887 889999999999999765432221 111111111000 00000 0001112
Q ss_pred CCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCc
Q 037878 631 ESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSP 710 (2280)
Q Consensus 631 ~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~ 710 (2280)
...+++.++|+|||||||.||||+++|+++...+.+....++...+++++.+.|++|+.++ ..++.++..|+++++.++
T Consensus 137 ~~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~~~ 215 (502)
T TIGR01734 137 AVKGDDNYYIIYTSGSTGNPKGVQISHDNLVSFTNWMLADFPLSEGKQFLNQAPFSFDLSV-MDLYPCLASGGTLHCLDK 215 (502)
T ss_pred cCCCCCeEEEEECCCCCCCCCEEEEecHHHHHHHHHHHHhCCCCCCceEEeecCceechhH-HHHHHHHHCCCEEEEcCH
Confidence 3467899999999999999999999999999999888888899999999999999999987 467889999999998765
Q ss_pred cccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCC
Q 037878 711 LTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQ 790 (2280)
Q Consensus 711 ~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~ 790 (2280)
.. ..++..+++.+.++++|.+..+|.++..++..... ...+++++|.++++|+++++++.+++.+.+ ++
T Consensus 216 ~~-~~~~~~~~~~i~~~~~~~~~~~p~~~~~~l~~~~~-----~~~~~~~l~~~~~~G~~~~~~~~~~~~~~~-----~~ 284 (502)
T TIGR01734 216 DI-TNNFKLLFEELPKTGLNVWVSTPSFVDMCLLDPNF-----NQENYPHLTHFLFCGEELPVKTAKALLERF-----PK 284 (502)
T ss_pred HH-hcCHHHHHHHHHHcCCeEEEEChhHHHHHHhcccc-----ccccCCcccEEEEcCCcCCHHHHHHHHHHC-----CC
Confidence 32 34889999999999999999999988766543211 124578999999999999999999999875 57
Q ss_pred cccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccC
Q 037878 791 GVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYW 870 (2280)
Q Consensus 791 ~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~ 870 (2280)
+.+++.||+||++..++........ .......++|.|.|+++++|+|+++ ..++.|+.|||+++|+.++.||+
T Consensus 285 ~~~~~~yG~tE~~~~~~~~~~~~~~-----~~~~~~~~vg~~~~~~~~~i~~~~~--~~~~~g~~Gel~v~g~~~~~gy~ 357 (502)
T TIGR01734 285 ATIYNTYGPTEATVAVTSVKITQEI-----LDQYPRLPIGFAKPDMNLFIMDEEG--EPLPEGEKGEIVIVGPSVSKGYL 357 (502)
T ss_pred cEEEeCccCCcceEEEEEEEccccc-----cccCCccccccccCCCEEEEECCCC--CCCCCCCeeEEEEcccccccccc
Confidence 8899999999987654432211111 0112235689999999999999875 44579999999999999999999
Q ss_pred CCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEecc
Q 037878 871 GREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVP 950 (2280)
Q Consensus 871 ~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~ 950 (2280)
++|+.|.+.|.. .++.+||+|||+|+++++.++++||.||+||++|++|+|.|||++|.++|+|.+ |+++++.
T Consensus 358 ~~~~~~~~~~~~----~~~~~~~~TGDlg~~~~~~l~i~GR~~d~i~~~G~~v~~~~IE~~l~~~~~v~~---~~vv~~~ 430 (502)
T TIGR01734 358 NNPEKTAEAFFS----HEGQPAYRTGDAGTITDGQLFYQGRLDFQIKLHGYRIELEDIEFNLRQSSYIES---AVVVPKY 430 (502)
T ss_pred CCcccchHhhee----CCCcEEEECCCEEEEECCEEEEeccccCeEEECcEEeCHHHHHHHHHcCCCccE---EEEEEEE
Confidence 999999988853 245689999999999866999999999999999999999999999999999865 7777643
Q ss_pred ccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 951 EEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 951 ~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
++. + .....+++++ ..+.. ....++.+.+++.+.+.++....|..++.++++|+|++||++|++|+++
T Consensus 431 ~~~--~------~~~~~~~~v~---~~~~~~~~~~~~~~~i~~~~~~~l~~~~~P~~~~~v~~lP~t~~gKv~r~~l~~~ 499 (502)
T TIGR01734 431 NKD--H------KVEYLIAAIV---PETEDFEKEFQLTKAIKKELKKSLPAYMIPRKFIYRDQLPLTANGKIDRKALAEE 499 (502)
T ss_pred cCC--C------CceEEEEEEE---ecccccccchhhHHHHHHHHhhhChhhcCCcEEEEccccCCCCCCcccHHHHHHh
Confidence 110 0 0011222222 22111 1112333445555554444445556666779999999999999999887
Q ss_pred h
Q 037878 1030 F 1030 (2280)
Q Consensus 1030 ~ 1030 (2280)
+
T Consensus 500 ~ 500 (502)
T TIGR01734 500 V 500 (502)
T ss_pred h
Confidence 5
No 73
>PRK03640 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.4e-51 Score=545.80 Aligned_cols=479 Identities=19% Similarity=0.275 Sum_probs=377.7
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
+++.++|++++.+. ||++|+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+.++++++|
T Consensus 2 ~~~~~~l~~~a~~~--p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~---g~~~~~~v~i~~~~~~~~~~~~l 70 (483)
T PRK03640 2 ETMPNWLKQRAFLT--PDRTAIEFEE------KKVTFMELHEAVVSVAGKLAAL---GVKKGDRVALLMKNGMEMILVIH 70 (483)
T ss_pred CcHHHHHHHHHHhC--CCceEEEeCC------eeeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHH
Confidence 47888999988874 8999987543 5899999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+++|++++|+++..+.++ +..++++++++.++++........... . ...++..... ......
T Consensus 71 a~~~~G~~~v~i~~~~~~~~-------~~~~~~~~~~~~vi~~~~~~~~~~~~~--~---~~~~~~~~~~----~~~~~~ 134 (483)
T PRK03640 71 ALQQLGAVAVLLNTRLSREE-------LLWQLDDAEVKCLITDDDFEAKLIPGI--S---VKFAELMNGP----KEEAEI 134 (483)
T ss_pred HHHhCCcEEEecCcCCCHHH-------HHHHHHhCCCCEEEEcchhhHHHhhhc--c---ccHHHHhhcc----cccCCC
Confidence 99999999999999988887 788999999999999765443221110 0 0111111100 011111
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++++++|+|||||||.||+|++||+++...+......++++++|++++.+|++|..++. .++.++..|+++++.
T Consensus 135 ~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~-~~~~~l~~G~~~~~~ 213 (483)
T PRK03640 135 QEEFDLDEVATIMYTSGTTGKPKGVIQTYGNHWWSAVGSALNLGLTEDDCWLAAVPIFHISGLS-ILMRSVIYGMRVVLV 213 (483)
T ss_pred CCCCCCCCeEEEEeCCCcCCCCcEEEEecHHHHHHHHHHHHhcCCCcCcEEEEecCHHHHHHHH-HHHHHHhcCCEEEec
Confidence 2234678999999999999999999999999988877777778899999999999999999874 578889999999887
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
+. .++..+++.++++++|++.++|+++..+....... ....++|.+++||+++++++++++.+.
T Consensus 214 ~~----~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~~------~~~~~lr~~~~~g~~~~~~~~~~~~~~------ 277 (483)
T PRK03640 214 EK----FDAEKINKLLQTGGVTIISVVSTMLQRLLERLGEG------TYPSSFRCMLLGGGPAPKPLLEQCKEK------ 277 (483)
T ss_pred CC----CCHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcCcc------ccCCcceEEEEcCCCCCHHHHHHHHHh------
Confidence 63 38999999999999999999999998887543221 223689999999999999999887763
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++.+++.||+||++..++....... ....+++|+|+++++++|.|+. ..++.|+.|||+++||+++.|
T Consensus 278 -~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~vG~p~~~~~~~i~~~~---~~~~~g~~Gel~v~g~~~~~g 345 (483)
T PRK03640 278 -GIPVYQSYGMTETASQIVTLSPEDA--------LTKLGSAGKPLFPCELKIEKDG---VVVPPFEEGEIVVKGPNVTKG 345 (483)
T ss_pred -CCCeeeeeccCcccccccccCcccc--------cccCCCcccccCCcEEEEecCC---CcCCCCCceEEEEECcchhhh
Confidence 4679999999998754332111100 1124789999999999999863 345789999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEE
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVI 947 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv 947 (2280)
|+++|+.++++|. ++||+|||+++++ ||.++++||+||++|++|++|+|.|||+++.++++|.+ ++|+
T Consensus 346 y~~~~~~~~~~~~--------~~~~~tGDl~~~~~~g~l~~~GR~~~~i~~~G~~v~~~~ie~~i~~~~~v~~---~~v~ 414 (483)
T PRK03640 346 YLNREDATRETFQ--------DGWFKTGDIGYLDEEGFLYVLDRRSDLIISGGENIYPAEIEEVLLSHPGVAE---AGVV 414 (483)
T ss_pred hcCCHHHHHHHHh--------cCCeeccceEEEcCCCCEEEeecccCeEEeCCEEECHHHHHHHHHhCCCeeE---EEEE
Confidence 9999999999885 3799999999996 99999999999999999999999999999999999865 7777
Q ss_pred eccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 948 GVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
+.+++..+ .....+++ .. .....+++.+.+++.+.. +++| ..++.+++||+|++||+||++|+
T Consensus 415 ~~~~~~~~----------~~~~~~~~--~~-~~~~~~~l~~~~~~~l~~-~~~p---~~i~~~~~iP~t~~gK~~r~~l~ 477 (483)
T PRK03640 415 GVPDDKWG----------QVPVAFVV--KS-GEVTEEELRHFCEEKLAK-YKVP---KRFYFVEELPRNASGKLLRHELK 477 (483)
T ss_pred eCCCcccC----------CceEEEEE--eC-CCCCHHHHHHHHHHhccC-CCCC---cEEEEeCCCCCCCccceeHHHHH
Confidence 76654321 12222222 12 222334566666666654 4444 45555699999999999999999
Q ss_pred HHhh
Q 037878 1028 KQFV 1031 (2280)
Q Consensus 1028 ~~~~ 1031 (2280)
+++.
T Consensus 478 ~~~~ 481 (483)
T PRK03640 478 QLVE 481 (483)
T ss_pred HHHh
Confidence 8865
No 74
>PRK13388 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.3e-51 Score=549.51 Aligned_cols=487 Identities=18% Similarity=0.196 Sum_probs=364.7
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCC-CCCCEEEEEeCCCHhHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVI-KPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv-~~Gd~V~i~~~~s~e~~va~ 547 (2280)
.++.+++..++ .|+++|+.+.+ ..+||+||.++++++|..|.+. |+ ++||+|+++++|++++++++
T Consensus 3 ~~~~~~l~~~~----~p~~~Al~~~~------~~lTy~el~~~~~~la~~L~~~---g~~~~~~~V~i~~~n~~~~v~~~ 69 (540)
T PRK13388 3 DTIAQLLRDRA----GDDTIAVRYGD------RTWTWREVLAEAAARAAALIAL---ADPDRPLHVGVLLGNTPEMLFWL 69 (540)
T ss_pred hhHHHHHHhhc----cCCceEEEECC------ceeeHHHHHHHHHHHHHHHHHh---cCCCCCCEEEEECCCCcHHHHHH
Confidence 35677776654 37899987532 4799999999999999999998 89 79999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccc-cccccccccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSW-VKNSKNLLAENV 626 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 626 (2280)
+||+++|++++|+||..+.++ +..+++++++++++++......+.....+....+..+.. ....... ....
T Consensus 70 lA~~~~Ga~~v~l~p~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~ 141 (540)
T PRK13388 70 AAAALGGYVLVGLNTTRRGAA-------LAADIRRADCQLLVTDAEHRPLLDGLDLPGVRVLDVDTPAYAELVAA-AGAL 141 (540)
T ss_pred HHHHhCCCEEEEecccCChHH-------HHHHHHhcCCCEEEEChhhhHHHHhhcccCceEEEccchhhhhhhcc-ccCc
Confidence 999999999999999999887 889999999999999765443322111111121111110 0000000 0011
Q ss_pred cccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEE
Q 037878 627 VCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAI 706 (2280)
Q Consensus 627 ~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~v 706 (2280)
.+.....++++++|+|||||||+||||+++|+++...+......++...+|+++..+|++|..+++..++.++..|++++
T Consensus 142 ~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~~G~~~v 221 (540)
T PRK13388 142 TPHREVDAMDPFMLIFTSGTTGAPKAVRCSHGRLAFAGRALTERFGLTRDDVCYVSMPLFHSNAVMAGWAPAVASGAAVA 221 (540)
T ss_pred CCCCCCCCCCeEEEEECCCCCCCCCEEEecHHHHHHHHHHHHHHhCCCCCCEEEEeeCchhhcchHHHHHHHHHcCcEEE
Confidence 11223567999999999999999999999999999888888888999999999999999999998777777899999988
Q ss_pred EeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCC
Q 037878 707 LFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPF 786 (2280)
Q Consensus 707 l~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~ 786 (2280)
+.+. .++..+++.++++++|++..+|..+..+....... ....+++|. + .|++++++...+|.+.+
T Consensus 222 ~~~~----~~~~~~~~~i~~~~vt~~~~~p~~l~~l~~~~~~~-----~~~~~~l~~-~-~G~~~~~~~~~~~~~~~--- 287 (540)
T PRK13388 222 LPAK----FSASGFLDDVRRYGATYFNYVGKPLAYILATPERP-----DDADNPLRV-A-FGNEASPRDIAEFSRRF--- 287 (540)
T ss_pred ECCC----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCCCCc-----cccccceEE-E-ECCCCCHHHHHHHHHHh---
Confidence 7542 27899999999999999999998887766432111 112345663 3 36667888888888764
Q ss_pred CCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEE-----------EEcCCCCcccCCCCCe
Q 037878 787 GLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIR-----------IVNPETSEEIGEPGKE 855 (2280)
Q Consensus 787 g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~-----------Ivd~~~~~~~~p~G~~ 855 (2280)
+++++|.||+||++.+++... ....+++|+|++|+++. ++|+++ ..+.+.|++
T Consensus 288 ---~~~l~~~YG~tE~~~~~~~~~------------~~~~~~vG~p~~g~~i~~~~~~~~~~~~~~d~~g-~~~~~~~~~ 351 (540)
T PRK13388 288 ---GCQVEDGYGSSEGAVIVVREP------------GTPPGSIGRGAPGVAIYNPETLTECAVARFDAHG-ALLNADEAI 351 (540)
T ss_pred ---CCceecccccccccceeecCC------------CCCCCCCCCCCCCcEEEcCCCCccccceeccCcc-ccccCCCcc
Confidence 467999999999987654321 01236789999997653 334332 223345789
Q ss_pred eEEEEc-CCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHH
Q 037878 856 GEVWIS-SPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVE 933 (2280)
Q Consensus 856 GEL~i~-Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~ 933 (2280)
|||+++ |++++.||+|+|+.|++.|. ++||+|||+|+++ ||.++++||+||+||++|+||+|.|||++|.
T Consensus 352 GEl~v~~g~~~~~gY~~~~~~t~~~~~--------~g~~~TGD~~~~~~dg~l~i~GR~~d~i~~~G~~v~p~eIE~~l~ 423 (540)
T PRK13388 352 GELVNTAGAGFFEGYYNNPEATAERMR--------HGMYWSGDLAYRDADGWIYFAGRTADWMRVDGENLSAAPIERILL 423 (540)
T ss_pred eEEEEecCCcccccccCChHHHHHHhh--------cCceeccceEEEcCCCcEEEeccCCceEEECCEEeCHHHHHHHHH
Confidence 999998 99999999999999999884 3799999999997 9999999999999999999999999999999
Q ss_pred hccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC-HHHHHHHHHH--HHHhcCcceeEEEEecC
Q 037878 934 SSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-KDVIENIKTR--VVEEHGVTVASVKLIKP 1010 (2280)
Q Consensus 934 ~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-~~l~~~l~~~--l~~~~~~~~~~~~lv~~ 1010 (2280)
++|+|.+ |+|++++++..+ ...+++++. .++...+ +++.+.++.+ +.. +++| ..++.+
T Consensus 424 ~~~~V~~---~~v~g~~~~~~g---------~~~~~~v~~---~~~~~~~~~~l~~~l~~~~~l~~-~~~P---~~~~~v 484 (540)
T PRK13388 424 RHPAINR---VAVYAVPDERVG---------DQVMAALVL---RDGATFDPDAFAAFLAAQPDLGT-KAWP---RYVRIA 484 (540)
T ss_pred hCCCceE---EEEEEccCCCCC---------ceeEEEEEE---CCCCcCCHHHHHHHHHhhccCCc-ccCC---cEEEEe
Confidence 9999875 899988775432 112222222 2332222 4555555543 332 4444 444555
Q ss_pred CCccCCCCcccchHHHHHHhhcC
Q 037878 1011 RTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1011 ~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
++||+|++|||+|++|+++..+.
T Consensus 485 ~~iP~t~~GKv~R~~L~~~~~~~ 507 (540)
T PRK13388 485 ADLPSTATNKVLKRELIAQGWAT 507 (540)
T ss_pred ccCCCCCcceeeHHhHHHhccCC
Confidence 99999999999999998876443
No 75
>PRK06155 crotonobetaine/carnitine-CoA ligase; Provisional
Probab=100.00 E-value=5.1e-51 Score=547.94 Aligned_cols=487 Identities=23% Similarity=0.304 Sum_probs=378.4
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.++++++++.. |+++|+...+ +.+||+||.++++++|..|.+. |+++|++|+++++|++++++++
T Consensus 20 ~~~l~~~l~~~a~~~--p~~~a~~~~~------~~~Ty~el~~~v~~la~~L~~~---gi~~g~~V~v~~~n~~~~~~~~ 88 (542)
T PRK06155 20 ERTLPAMLARQAERY--PDRPLLVFGG------TRWTYAEAARAAAAAAHALAAA---GVKRGDRVALMCGNRIEFLDVF 88 (542)
T ss_pred ccCHHHHHHHHHHHC--CCCeEEEeCC------ccccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCChHHHHHH
Confidence 457889999999874 8899987532 4799999999999999999998 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCC--CCC-ccccccccc-----c--
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWP--NLP-WLHTDSWVK-----N-- 617 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~--~~~-~~~~~~~~~-----~-- 617 (2280)
|||+++|++++|+++..+.++ +..+++++++++++++.+....+...... ... .+..+.... .
T Consensus 89 lA~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (542)
T PRK06155 89 LGCAWLGAIAVPINTALRGPQ-------LEHILRNSGARLLVVEAALLAALEAADPGDLPLPAVWLLDAPASVSVPAGWS 161 (542)
T ss_pred HHHHHhCCEEEEeccccCHHH-------HHHHHHhcCceEEEEChhhHHHHHHhcccccCcceEEEecCccccccccccc
Confidence 999999999999999999888 88999999999999987654432211100 000 000010000 0
Q ss_pred ccccc-cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHH
Q 037878 618 SKNLL-AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLF 696 (2280)
Q Consensus 618 ~~~~~-~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~ 696 (2280)
..... ...........++++++|+|||||||.||||+++|+++..........+++.+++++++++|++|..++. .++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~V~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~~~~~~~-~~~ 240 (542)
T PRK06155 162 TAPLPPLDAPAPAAAVQPGDTAAILYTSGTTGPSKGVCCPHAQFYWWGRNSAEDLEIGADDVLYTTLPLFHTNALN-AFF 240 (542)
T ss_pred hhhhcccCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEEHHHHHHHHHHHHHhcCCCCCCEEEEecCHHHHHHHH-HHH
Confidence 00000 0000112234678999999999999999999999999988887777888999999999999999999985 578
Q ss_pred HHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHH
Q 037878 697 TAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTV 776 (2280)
Q Consensus 697 ~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~ 776 (2280)
.++..|+++++.+. .++..+++.++++++|++..+|+++..+.+..... ..+.+++|.++.|| +++++.
T Consensus 241 ~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~-----~~~~~~l~~~~~g~--~~~~~~ 309 (542)
T PRK06155 241 QALLAGATYVLEPR----FSASGFWPAVRRHGATVTYLLGAMVSILLSQPARE-----SDRAHRVRVALGPG--VPAALH 309 (542)
T ss_pred HHHHcCceEEeeCC----CCHHHHHHHHHHhCCcEEEchHHHHHHHHcCcCcc-----ccccCceEEEEEcC--CCHHHH
Confidence 99999999888653 27999999999999999999999888776543221 23467899887665 578888
Q ss_pred HHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCee
Q 037878 777 KRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEG 856 (2280)
Q Consensus 777 ~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~G 856 (2280)
+++.+.+ ++.++|.||+||++.+++.... ....+++|.|.++++++|+|+++ ..+|.|+.|
T Consensus 310 ~~~~~~~------~~~v~~~YG~tE~~~~~~~~~~-----------~~~~~~vG~~~~~~~~~i~d~~~--~~~~~g~~G 370 (542)
T PRK06155 310 AAFRERF------GVDLLDGYGSTETNFVIAVTHG-----------SQRPGSMGRLAPGFEARVVDEHD--QELPDGEPG 370 (542)
T ss_pred HHHHHHc------CCCEEeeecccccCccccCCCC-----------CCCCCCcCccCCCceEEEECCCC--CCCCCCCce
Confidence 8888764 4679999999999876543211 11236789999999999999774 345799999
Q ss_pred EEEEcCC---CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHH
Q 037878 857 EVWISSP---SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTV 932 (2280)
Q Consensus 857 EL~i~Gp---~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L 932 (2280)
||+++|+ +++.||+++++.|.+.|. ++||+|||+|+++ ||.++|+||+||+||++|++|+|.|||++|
T Consensus 371 ei~v~~~~~~~~~~GY~~~~~~~~~~~~--------~~~~~TGD~~~~~~dG~l~i~GR~~d~i~~~G~~v~p~eIE~~l 442 (542)
T PRK06155 371 ELLLRADEPFAFATGYFGMPEKTVEAWR--------NLWFHTGDRVVRDADGWFRFVDRIKDAIRRRGENISSFEVEQVL 442 (542)
T ss_pred EEEEecCCccccchhhcCCHHHHHHhhc--------CCcEeccceEEEcCCceEEEEecCCCEEEeCCEEECHHHHHHHH
Confidence 9999998 699999999999998874 3899999999997 999999999999999999999999999999
Q ss_pred HhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcceeEEEEecCC
Q 037878 933 ESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTVASVKLIKPR 1011 (2280)
Q Consensus 933 ~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~lv~~~ 1011 (2280)
.++|+|.+ |+|++++++..+ .....++. ...+... ..++++.+++++.. +++| ..+..++
T Consensus 443 ~~~~~V~~---~~v~~v~~~~~~----------~~~~~~v~--~~~~~~~~~~~~~~~~~~~l~~-~~~P---~~i~~~~ 503 (542)
T PRK06155 443 LSHPAVAA---AAVFPVPSELGE----------DEVMAAVV--LRDGTALEPVALVRHCEPRLAY-FAVP---RYVEFVA 503 (542)
T ss_pred HhCCCeeE---EEEEeecccccC----------ceEEEEEE--ECCCCCCCHHHHHHHHHhhCcC-ccCC---cEEEEec
Confidence 99999975 888887765322 22222222 2222222 24566677766653 4444 4455569
Q ss_pred CccCCCCcccchHHHHHHh
Q 037878 1012 TMSKTTSGKIKRFECLKQF 1030 (2280)
Q Consensus 1012 ~lP~t~sGKvdR~~L~~~~ 1030 (2280)
+||+|++||++|++|++++
T Consensus 504 ~iP~t~~GKi~r~~l~~~~ 522 (542)
T PRK06155 504 ALPKTENGKVQKFVLREQG 522 (542)
T ss_pred cCCCCcccceeHHHHHhhc
Confidence 9999999999999998875
No 76
>PRK05605 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=3.2e-51 Score=555.34 Aligned_cols=495 Identities=25% Similarity=0.370 Sum_probs=379.9
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.++++..+++ .|+++|+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+++++++++
T Consensus 32 ~~l~~~~~~~~~~--~p~~~a~~~~~------~~~Ty~ql~~~~~~~A~~L~~~---gi~~gd~V~l~~~n~~~~~~~~l 100 (573)
T PRK05605 32 TTLVDLYDNAVAR--FGDRPALDFFG------ATTTYAELGKQVRRAAAGLRAL---GVRPGDRVAIVLPNCPQHIVAFY 100 (573)
T ss_pred CCHHHHHHHHHHH--CCCCeEEEeCC------CcccHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCHHHHHHHH
Confidence 4789999888876 48999987632 4799999999999999999988 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCC-ccccc--------------
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLP-WLHTD-------------- 612 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~-~~~~~-------------- 612 (2280)
||+++|++++|+++..+.++ +.+++++++++.++++........... ..... .+..+
T Consensus 101 A~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 173 (573)
T PRK05605 101 AVLRLGAVVVEHNPLYTAHE-------LEHPFEDHGARVAIVWDKVAPTVERLRRTTPLETIVSVNMIAAMPLLQRLALR 173 (573)
T ss_pred HHHhcCcEEeecCcCCCHHH-------HHHHHhccCCcEEEechhhHHHHHhhhhccccceeEeeecccccccccccccc
Confidence 99999999999999999888 889999999999998665322111000 00000 00000
Q ss_pred ---------------------cccccccccccc--cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH
Q 037878 613 ---------------------SWVKNSKNLLAE--NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK 669 (2280)
Q Consensus 613 ---------------------~~~~~~~~~~~~--~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~ 669 (2280)
.+.......... .........++++++|+|||||||.||+|++||+++...+.....
T Consensus 174 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~ 253 (573)
T PRK05605 174 LPIPALRKARAALTGPAPGTVPWETLVDAAIGGDGSDVSHPRPTPDDVALILYTSGTTGKPKGAQLTHRNLFANAAQGKA 253 (573)
T ss_pred cccccccccccccccCCCcceeHHHHhhccccccccccCCCCCCCCCEEEEEcCCCCCCCCcEEEEecHHHHHHHHHHHh
Confidence 000000000000 001122345789999999999999999999999999887765544
Q ss_pred HcC--CCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHh
Q 037878 670 RYK--STSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLE 747 (2280)
Q Consensus 670 ~~~--~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~ 747 (2280)
.+. ...++++++.+|++|.+++...++.++..|+++++.++ .++..+++.++++++|++.++|.+++.+.+...
T Consensus 254 ~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~ 329 (573)
T PRK05605 254 WVPGLGDGPERVLAALPMFHAYGLTLCLTLAVSIGGELVLLPA----PDIDLILDAMKKHPPTWLPGVPPLYEKIAEAAE 329 (573)
T ss_pred hccccCCCCcEEEEecChHHHHHHHHHHHHHHHcCCEEEEeCC----CCHHHHHHHHHHhCCEEEEchHHHHHHHHhCcc
Confidence 332 23578999999999999988788888999999988753 378999999999999999999999988876433
Q ss_pred cccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeec
Q 037878 748 SSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCG 827 (2280)
Q Consensus 748 ~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g 827 (2280)
.. ..+++++|.+++||+++++++.++|.+.+ +..+++.||+||++.+++...... ....+
T Consensus 330 ~~-----~~~~~~lr~i~~gg~~l~~~~~~~~~~~~------~~~i~~~YG~TE~~~~~~~~~~~~---------~~~~~ 389 (573)
T PRK05605 330 ER-----GVDLSGVRNAFSGAMALPVSTVELWEKLT------GGLLVEGYGLTETSPIIVGNPMSD---------DRRPG 389 (573)
T ss_pred cc-----CCCchhccEEEECCCcCCHHHHHHHHHHh------CCCeecccccchhchhhhcCCccc---------CCcCC
Confidence 22 24578999999999999999999998764 467999999999987665432110 11246
Q ss_pred cccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeE
Q 037878 828 YVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKF 906 (2280)
Q Consensus 828 ~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l 906 (2280)
++|.|+|++.++|+|+++....++.|+.|||+++|+.++.||+++++.|++.|.. +||+|||+++++ +|.+
T Consensus 390 ~~G~~~~~~~~~i~d~~~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--------g~~~TGD~~~~~~~g~l 461 (573)
T PRK05605 390 YVGVPFPDTEVRIVDPEDPDETMPDGEEGELLVRGPQVFKGYWNRPEETAKSFLD--------GWFRTGDVVVMEEDGFI 461 (573)
T ss_pred ccccCCCCCEEEEEcCCCCCccCCCCCeeEEEEecCchhhhhcCChhHhhhcccC--------CCcccCCEEEEcCCCcE
Confidence 7899999999999998763345578999999999999999999999999988752 599999999996 9999
Q ss_pred EEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHH
Q 037878 907 FITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKD 985 (2280)
Q Consensus 907 ~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~ 985 (2280)
+++||+||+||++|+||+|.|||+++.+++.|.+ ++|++.+++..+ +...++ ++..++.. ...+
T Consensus 462 ~i~gR~dd~i~~~G~~v~p~eIE~~l~~~~~i~~---~~v~~~~~~~~~----------~~~~~~--vv~~~~~~~~~~~ 526 (573)
T PRK05605 462 RIVDRIKELIITGGFNVYPAEVEEVLREHPGVED---AAVVGLPREDGS----------EEVVAA--VVLEPGAALDPEG 526 (573)
T ss_pred EEEeccccceeeCCEEECHHHHHHHHHhCcccce---EEEEeeecccCC----------eEEEEE--EEECCCCCCCHHH
Confidence 9999999999999999999999999999999875 888887664321 222222 22233322 2245
Q ss_pred HHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 986 VIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 986 l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+.+.+++++.. +++ |..++.+++||+|.+||++|++|++++.+
T Consensus 527 l~~~~~~~l~~-~~~---p~~i~~~~~iP~t~~GKi~r~~L~~~~~~ 569 (573)
T PRK05605 527 LRAYCREHLTR-YKV---PRRFYHVDELPRDQLGKVRRREVREELLE 569 (573)
T ss_pred HHHHHHHhCcc-ccC---CcEEEEeccCCCCCcccccHHHHHHHHHH
Confidence 55666655553 343 44455568999999999999999988754
No 77
>PRK08279 long-chain-acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-51 Score=560.52 Aligned_cols=499 Identities=17% Similarity=0.185 Sum_probs=372.5
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.+.+++.+ +|+++|+++.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+.++++++
T Consensus 36 ~~tl~~~l~~~a~~--~p~~~Ai~~~~------~~~Ty~eL~~~~~~la~~L~~~---g~~~gd~V~i~~~n~~~~v~~~ 104 (600)
T PRK08279 36 KRSLGDVFEEAAAR--HPDRPALLFED------QSISYAELNARANRYAHWAAAR---GVGKGDVVALLMENRPEYLAAW 104 (600)
T ss_pred cccHHHHHHHHHHh--CCCCcEEEeCC------CcccHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCCHHHHHHH
Confidence 45789999988876 48999998632 5799999999999999999998 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC--CCCCCccccc------------c
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS--WPNLPWLHTD------------S 613 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~--~~~~~~~~~~------------~ 613 (2280)
|||+++|++++|+++..+.++ +.++++++++++++++.+....+.... ......+... +
T Consensus 105 lA~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (600)
T PRK08279 105 LGLAKLGAVVALLNTQQRGAV-------LAHSLNLVDAKHLIVGEELVEAFEEARADLARPPRLWVAGGDTLDDPEGYED 177 (600)
T ss_pred HHHHhcCcEEeecCCCCCHHH-------HHHHHHhcCCCEEEEChHHHHHHHHHhhhhcccceEEEecCccccccccHHH
Confidence 999999999999999999887 889999999999999876543322110 0000000000 0
Q ss_pred ccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH
Q 037878 614 WVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 614 ~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
+...................++++++|+|||||||.||||++||+++.+++.+....+++.++|++++++|++|.++++.
T Consensus 178 ~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~l~~~d~~l~~~pl~h~~g~~~ 257 (600)
T PRK08279 178 LAAAAAGAPTTNPASRSGVTAKDTAFYIYTSGTTGLPKAAVMSHMRWLKAMGGFGGLLRLTPDDVLYCCLPLYHNTGGTV 257 (600)
T ss_pred HhhhcccCCccCCCcccCCCccccEEEEEcCCCCCCCcEEEEeHHHHHHHHHHHHHhcCCCCCcEEEEecCchhhhhHHH
Confidence 00000000000011122345789999999999999999999999999999999888899999999999999999999988
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
.++.++..|+++++.++ + ++..+++.+.++++|++..+|++++.+....... .....++|. ++|+++++
T Consensus 258 ~~~~~l~~G~~~v~~~~--~--~~~~~~~~i~~~~~t~~~~~p~l~~~l~~~~~~~-----~~~~~~l~~--~~g~~l~~ 326 (600)
T PRK08279 258 AWSSVLAAGATLALRRK--F--SASRFWDDVRRYRATAFQYIGELCRYLLNQPPKP-----TDRDHRLRL--MIGNGLRP 326 (600)
T ss_pred HHHHHHhcCcEEEEcCC--C--CHHHHHHHHHHhcceEEeehHHHHHHHHhCCCCc-----cccCcceeE--EecCCCCH
Confidence 88888999998888653 2 7889999999999999999999988876532211 123456775 35788999
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCC----C---------ceEEE
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDP----D---------VDIRI 840 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~p----g---------~~v~I 840 (2280)
++.++|.+.+ +...++|.||+||++..++... .. .+++|.+.+ + ....|
T Consensus 327 ~~~~~~~~~~-----~~~~l~~~YG~tE~~~~~~~~~--~~-----------~~~~g~~~~~~~~~~~~~~~~~~~~~~i 388 (600)
T PRK08279 327 DIWDEFQQRF-----GIPRILEFYAASEGNVGFINVF--NF-----------DGTVGRVPLWLAHPYAIVKYDVDTGEPV 388 (600)
T ss_pred HHHHHHHHHh-----CcceeeeeecccccceeecccC--CC-----------CcccccccccccccceeeeeccCcCcee
Confidence 9999999875 2346999999999886433211 11 123333333 2 23334
Q ss_pred EcCCCCcccCCCCCeeEEE--EcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEE
Q 037878 841 VNPETSEEIGEPGKEGEVW--ISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLII 917 (2280)
Q Consensus 841 vd~~~~~~~~p~G~~GEL~--i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IK 917 (2280)
.|.++....++.|+.|||+ |+|++++.|| ++++.|+++|..+.. ..+++||+|||+|+++ ||.++|+||+||+||
T Consensus 389 ~~~~~~~~~~~~g~~Gel~~~i~~~~~~~GY-~~~~~t~~~~~~~~~-~~~~~~~~TGDlg~~~~dG~l~~~GR~~d~ik 466 (600)
T PRK08279 389 RDADGRCIKVKPGEVGLLIGRITDRGPFDGY-TDPEASEKKILRDVF-KKGDAWFNTGDLMRDDGFGHAQFVDRLGDTFR 466 (600)
T ss_pred eCCCCccccCCCCCceeEEEEecCccccccc-CCchhhHHHHhhccc-CCCCceEeecceEEEcCCccEEEecccCCeEE
Confidence 4444433445789999998 7899999999 899999999875432 2356899999999997 999999999999999
Q ss_pred ECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHh
Q 037878 918 VAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEE 997 (2280)
Q Consensus 918 i~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~ 997 (2280)
++|+||+|.|||++|.++|+|.+ |+|++++++... +...++++++.+ ......+++.+.++++|+.
T Consensus 467 ~~G~~i~p~eIE~~l~~~p~V~~---a~v~gv~~~~~~--------~~~~~~~vv~~~--~~~~~~~~l~~~l~~~L~~- 532 (600)
T PRK08279 467 WKGENVATTEVENALSGFPGVEE---AVVYGVEVPGTD--------GRAGMAAIVLAD--GAEFDLAALAAHLYERLPA- 532 (600)
T ss_pred ECCcccCHHHHHHHHhcCCCcce---EEEEEeecCCCC--------CccceeEEEecC--CccCCHHHHHHHHHhhCcc-
Confidence 99999999999999999999875 888887654211 122233333321 1122235666666666654
Q ss_pred cCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 998 HGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 998 ~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+++| ..++.+++||+|.|||+||++|+++..+
T Consensus 533 ~~~P---~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 564 (600)
T PRK08279 533 YAVP---LFVRLVPELETTGTFKYRKVDLRKEGFD 564 (600)
T ss_pred ccCC---eEEEeecCCCCCcchhhhHHHHhhcCCC
Confidence 4444 4455569999999999999999887543
No 78
>PRK12583 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.2e-51 Score=551.90 Aligned_cols=500 Identities=20% Similarity=0.311 Sum_probs=385.4
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++.+++. |+++|+.+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+++++++++
T Consensus 18 ~~l~~~l~~~~~~~--p~~~a~~~~~~~----~~~Ty~~l~~~~~~~a~~L~~~---gi~~g~~V~i~~~~~~~~~~~~~ 88 (558)
T PRK12583 18 QTIGDAFDATVARF--PDREALVVRHQA----LRYTWRQLADAVDRLARGLLAL---GVQPGDRVGIWAPNCAEWLLTQF 88 (558)
T ss_pred CcHHHHHHHHHHHC--CCCeEEEecCCC----cEecHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCChHHHHHHH
Confidence 47899999888774 899998765432 5799999999999999999988 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh-----hc----c-----------CCCCCCCc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA-----VR----V-----------GSWPNLPW 608 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~-----~~----~-----------~~~~~~~~ 608 (2280)
||+++|++++|+++..+.++ +..+++++++++++++...... +. . ...+....
T Consensus 89 a~~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (558)
T PRK12583 89 ATARIGAILVNINPAYRASE-------LEYALGQSGVRWVICADAFKTSDYHAMLQELLPGLAEGQPGALACERLPELRG 161 (558)
T ss_pred HHHhhCCEEEecCCCCCHHH-------HHHHHHhcCCcEEEEeccccccchhHHHHHHhhhhccccccccccccCCcceE
Confidence 99999999999999998888 8899999999999987543210 00 0 00000000
Q ss_pred -ccccc--------ccccc--cccc-c-ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCC
Q 037878 609 -LHTDS--------WVKNS--KNLL-A-ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTS 675 (2280)
Q Consensus 609 -~~~~~--------~~~~~--~~~~-~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~ 675 (2280)
+.... +.... .... . ..........++++++++|||||||.||||.++|+++.+.+......+++.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGsTG~PK~v~~s~~~l~~~~~~~~~~~~~~~ 241 (558)
T PRK12583 162 VVSLAPAPPPGFLAWHELQARGETVSREALAERQASLDRDDPINIQYTSGTTGFPKGATLSHHNILNNGYFVAESLGLTE 241 (558)
T ss_pred EEEecCCCCccccchHhhhhcccccccccccccccccCCCCcEEEEECCCCCCCCceEEeeHHHHHHHHHHHHHHhCCCC
Confidence 00000 00000 0000 0 0000112345789999999999999999999999999998888888889999
Q ss_pred CcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccc
Q 037878 676 KTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRS 755 (2280)
Q Consensus 676 ~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~ 755 (2280)
+|+++..+|++|.++.+..++.++..|+++++... . .++..+++.++++++|++.++|.++..++..... ..
T Consensus 242 ~d~~~~~~p~~~~~g~~~~~~~~l~~g~~v~~~~~-~--~~~~~~~~~i~~~~~t~l~~~P~~~~~l~~~~~~-----~~ 313 (558)
T PRK12583 242 HDRLCVPVPLYHCFGMVLANLGCMTVGACLVYPNE-A--FDPLATLQAVEEERCTALYGVPTMFIAELDHPQR-----GN 313 (558)
T ss_pred CCeEEEecCchhhhhHHHHHHHHHhcCceEEeecC-C--CCHHHHHHHHHHcCCeEEeccHHHHHHHHccccc-----cC
Confidence 99999999999999998899999999998886543 2 3889999999999999999999988766543221 12
Q ss_pred cCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCC
Q 037878 756 FDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPD 835 (2280)
Q Consensus 756 ~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg 835 (2280)
.+++++|.+++||+++++++.+++.+.+ +...+++.||+||++.+++...... .. ....+++|+|+|+
T Consensus 314 ~~~~~lr~i~~~G~~~~~~~~~~~~~~~-----~~~~i~~~YG~tE~~~~~~~~~~~~-~~------~~~~~~vG~p~~~ 381 (558)
T PRK12583 314 FDLSSLRTGIMAGAPCPIEVMRRVMDEM-----HMAEVQIAYGMTETSPVSLQTTAAD-DL------ERRVETVGRTQPH 381 (558)
T ss_pred CCchhheEEEecCCCCCHHHHHHHHHHc-----CCcceeccccccccccceeccCccc-cc------ccccCCCCccCCC
Confidence 5678999999999999999999998875 3457999999999997765432211 10 1224678999999
Q ss_pred ceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCC
Q 037878 836 VDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKD 914 (2280)
Q Consensus 836 ~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd 914 (2280)
+.++|+|+++ ..++.|+.|||+|+|+.++.||+|+++.+.+.|.. ++||+|||+++++ ||.+++.||+||
T Consensus 382 ~~~~i~d~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-------~~~~~TGDl~~~~~dg~l~i~GR~~~ 452 (558)
T PRK12583 382 LEVKVVDPDG--ATVPRGEIGELCTRGYSVMKGYWNNPEATAESIDE-------DGWMHTGDLATMDEQGYVRIVGRSKD 452 (558)
T ss_pred CeEEEECCCC--CCCCCCCeeEEEEEeCccchhhcCChHHHHhhcCC-------CCCeeccceEEECCCccEEEEecccc
Confidence 9999999884 44579999999999999999999999998887742 4899999999996 999999999999
Q ss_pred eEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHH
Q 037878 915 LIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTR 993 (2280)
Q Consensus 915 ~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~ 993 (2280)
+||++|++|+|.|||++|.++++|.+ ++|++++++..+ .... ++++..++. ....++.+.++++
T Consensus 453 ~i~~~G~~v~~~~IE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~--~~v~~~~~~~~~~~~i~~~~~~~ 517 (558)
T PRK12583 453 MIIRGGENIYPREIEEFLFTHPAVAD---VQVFGVPDEKYG----------EEIV--AWVRLHPGHAASEEELREFCKAR 517 (558)
T ss_pred eeEECCEEeCHHHHHHHHHhCCCeeE---EEEEeeecCCCC----------cEEE--EEEEECCCCCCCHHHHHHHHHhh
Confidence 99999999999999999999999865 888887765321 1222 222222222 2234566666666
Q ss_pred HHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 994 VVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 994 l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
|+. +++ |..++.+++||+|.+||++|++|++++.+
T Consensus 518 L~~-~~~---P~~i~~v~~lP~t~sGK~~r~~L~~~~~~ 552 (558)
T PRK12583 518 IAH-FKV---PRYFRFVDEFPMTVTGKVQKFRMREISIE 552 (558)
T ss_pred ccc-CcC---CcEEEEeccCCCCCCCCccHHHHHHHHHh
Confidence 654 343 44455569999999999999999988654
No 79
>PRK07470 acyl-CoA synthetase; Validated
Probab=100.00 E-value=4.8e-51 Score=548.59 Aligned_cols=504 Identities=21% Similarity=0.343 Sum_probs=380.3
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.++++..+++ +|+++|+.+.+ +++||+||.++++++|+.|++. |+++||+|+++++|++++++++
T Consensus 6 ~~~~~~~~~~~a~~--~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~---g~~~g~~v~i~~~~~~~~~~~~ 74 (528)
T PRK07470 6 VMNLAHFLRQAARR--FPDRIALVWGD------RSWTWREIDARVDALAAALAAR---GVRKGDRILVHSRNCNQMFESM 74 (528)
T ss_pred CCCHHHHHHHHHHH--CCCceEEEECC------ccccHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCCHHHHHHH
Confidence 45688889888876 48999987532 5799999999999999999998 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-ccccccc--cccccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTDSW--VKNSKNLL 622 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~~~--~~~~~~~~ 622 (2280)
+||+++|++++|+++..+.++ +..++++++++.++++.+........ ..+... .+..... ........
T Consensus 75 lA~~~~G~~~v~l~~~~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (528)
T PRK07470 75 FAAFRLGAVWVPTNFRQTPDE-------VAYLAEASGARAMICHADFPEHAAAVRAASPDLTHVVAIGGARAGLDYEALV 147 (528)
T ss_pred HHHHhCCeEEEecCccCCHHH-------HHHHHHhcCceEEEEcchhHHHHHHHHhhCCcCceEEEeCCCcccccHHHHH
Confidence 999999999999999999888 88999999999999987643222100 000000 0000000 00000000
Q ss_pred c---ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH-c-CCCCCcEEEEEcCchhhhhHHHHHHH
Q 037878 623 A---ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR-Y-KSTSKTVLVSWLPQYHDMGLIGGLFT 697 (2280)
Q Consensus 623 ~---~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~-~-~~~~~d~~l~~~pl~h~~gl~~~i~~ 697 (2280)
. ..........++++++|+|||||||.||||+++|+++...+...... + +...+|+.+.++|++|++++. .++
T Consensus 148 ~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~- 225 (528)
T PRK07470 148 ARHLGARVANAAVDHDDPCWFFFTSGTTGRPKAAVLTHGQMAFVITNHLADLMPGTTEQDASLVVAPLSHGAGIH-QLC- 225 (528)
T ss_pred hcCCCCCCCcccCCCCCeEEEEeCCCCCCCCcEEEEehhhHHHHHHHHHHHhccCCCcccEEEEeccchhHHHHH-HHH-
Confidence 0 00111233567899999999999999999999999987655443222 2 467889999999999999974 344
Q ss_pred HHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHH
Q 037878 698 AMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVK 777 (2280)
Q Consensus 698 ~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~ 777 (2280)
.++.|+++++.+...+ ++..+++.++++++|++.++|++++.+.+.... ...+++++|.+++||+++++++.+
T Consensus 226 ~~~~g~~~~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~lr~~~~gG~~l~~~~~~ 298 (528)
T PRK07470 226 QVARGAATVLLPSERF--DPAEVWALVERHRVTNLFTVPTILKMLVEHPAV-----DRYDHSSLRYVIYAGAPMYRADQK 298 (528)
T ss_pred HHhcCceEEEecccCc--CHHHHHHHHHhcCCeEEechHHHHHHHHhCcCc-----CCCCCcceEEEEEcCCCCCHHHHH
Confidence 5677777777655444 889999999999999999999999888654321 125678999999999999999999
Q ss_pred HHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeE
Q 037878 778 RFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGE 857 (2280)
Q Consensus 778 ~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GE 857 (2280)
++.+.+ +..+++.||+||++..++......... +.......+++|.|+++++++|+|+++ ..++.|+.||
T Consensus 299 ~~~~~~------g~~~~~~YG~TE~~~~~~~~~~~~~~~--~~~~~~~~~~~G~~~~g~~~~i~d~~~--~~~~~g~~Ge 368 (528)
T PRK07470 299 RALAKL------GKVLVQYFGLGEVTGNITVLPPALHDA--EDGPDARIGTCGFERTGMEVQIQDDEG--RELPPGETGE 368 (528)
T ss_pred HHHHHh------CcHHHHhCCCcccCCceeecchhhccc--cccccceeeccCcccCCcEEEEECCCC--CCCCCCCceE
Confidence 887764 356999999999987655322110000 000123457899999999999999875 3457999999
Q ss_pred EEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhcc
Q 037878 858 VWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESST 936 (2280)
Q Consensus 858 L~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p 936 (2280)
|+|+|+.++.||+++|+.+++.|. ++||+|||+++++ ||.++++||+||+||++|+||+|.|||++|.+++
T Consensus 369 l~i~~~~~~~gy~~~~~~~~~~~~--------~~~~~TGDl~~~~~~g~l~~~GR~dd~i~~~G~~v~~~~IE~~l~~~~ 440 (528)
T PRK07470 369 ICVIGPAVFAGYYNNPEANAKAFR--------DGWFRTGDLGHLDARGFLYITGRASDMYISGGSNVYPREIEEKLLTHP 440 (528)
T ss_pred EEEeCCccchhhcCCHHHHHhhhc--------CCcEecceeEEEccCCeEEEeCCccceEEeCCEEECHHHHHHHHHhCC
Confidence 999999999999999999998874 3899999999997 9999999999999999999999999999999999
Q ss_pred CCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccC
Q 037878 937 EHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSK 1015 (2280)
Q Consensus 937 ~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~ 1015 (2280)
.|.+ |+|++.+++..+ ....++++ ..++. ....++.+.+++.|+. +++|. .++.+++||+
T Consensus 441 ~v~~---~~v~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~~~~~l~~~l~~-~~~P~---~~~~~~~iP~ 501 (528)
T PRK07470 441 AVSE---VAVLGVPDPVWG----------EVGVAVCV--ARDGAPVDEAELLAWLDGKVAR-YKLPK---RFFFWDALPK 501 (528)
T ss_pred CceE---EEEEeccCcccC----------ceeEEEEE--ECCCCCCCHHHHHHHHHHhhhc-CCCCc---EEEEeccCCC
Confidence 8865 888888775432 11222222 22232 2335677777777754 55554 3445589999
Q ss_pred CCCcccchHHHHHHhhcCCC
Q 037878 1016 TTSGKIKRFECLKQFVDGTL 1035 (2280)
Q Consensus 1016 t~sGKvdR~~L~~~~~~~~~ 1035 (2280)
|++||++|++|++++.+.-+
T Consensus 502 t~~GKi~r~~l~~~~~~~~~ 521 (528)
T PRK07470 502 SGYGKITKKMVREELEERGL 521 (528)
T ss_pred CCcccccHHHHHHHHHhccc
Confidence 99999999999998766543
No 80
>TIGR02275 DHB_AMP_lig 2,3-dihydroxybenzoate-AMP ligase. Proteins in this family belong to the AMP-binding enzyme family (pfam00501). Members activate 2,3-dihydroxybenzoate (DHB) by ligation of AMP from ATP with the release of pyrophosphate; many are involved in synthesis of siderophores such as enterobactin, vibriobactin, vulnibactin, etc. The most closely related proteine believed to differ in function activates salicylate rather than DHB.
Probab=100.00 E-value=4.4e-51 Score=548.24 Aligned_cols=489 Identities=21% Similarity=0.276 Sum_probs=375.9
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++++++ +|+++|+...+ +++||+||.++++++|..|.+. |+++||+|+++++|+.++++++
T Consensus 22 ~~~l~~~~~~~a~~--~p~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~~~---g~~~g~~V~i~~~~~~~~~~~~ 90 (527)
T TIGR02275 22 DKPLTDILRDQAAR--YPDAIAIICGN------RQWSYRELDQRADNLAAGLTKL---GIGQGDTAVVQLPNIAEFYIVF 90 (527)
T ss_pred CCcHHHHHHHHHHH--CCCceEEEeCC------ceecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCcHHHHHHH
Confidence 34688899888876 48999986421 5899999999999999999998 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh-----hc--cCCCCCCCcccccc-c--ccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA-----VR--VGSWPNLPWLHTDS-W--VKN 617 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~-----~~--~~~~~~~~~~~~~~-~--~~~ 617 (2280)
|||+++|++++++++..+.++ +.+++++++++.++++...... .. ....+....+.... . ...
T Consensus 91 la~~~~G~~~v~~~~~~~~~~-------~~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (527)
T TIGR02275 91 FALLKLGIAPVLALFSHRKSE-------LTAYAQQIEPALYIIDRAHSLFDYDAFARQLQSKLPTLRNIIVAGQTRVEAE 163 (527)
T ss_pred HHHHHcCeEEeccccccCHHH-------HHHHHHhcCCcEEEEcCcccccchHHHHHHHHhhCCcceEEEEecCCCCcch
Confidence 999999999999999888777 8899999999999987543210 00 00011111000000 0 000
Q ss_pred ccc--cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH-H
Q 037878 618 SKN--LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG-G 694 (2280)
Q Consensus 618 ~~~--~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~-~ 694 (2280)
... .............++|+|+|+|||||||.||||++||+++...+......+.++.++++++++|++|.+++.. .
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~d~~l~~~P~~h~~~~~~~~ 243 (527)
T TIGR02275 164 LFLWLESPAEPVKFPPTKSDEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICWLTQQTRYLCALPAAHNYPLSSPG 243 (527)
T ss_pred hhHHhhCcCccccCCCCCCCccEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCCEEEECCChHhhhhhhHHH
Confidence 000 0000111123456789999999999999999999999999999888888888999999999999999998765 5
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHH
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQT 774 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~ 774 (2280)
++.++..|+++++.++ .+|..+++.++++++|++..+|.++..+.+..... ..+++++|.+++||++++++
T Consensus 244 ~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-----~~~~~~lr~~~~gG~~l~~~ 314 (527)
T TIGR02275 244 ALGVFYAGGCVVLAPD----PSPTDCFPLIERHKVTVTALVPPAVALWMQAASKS-----RYDLSSLKLLQVGGAKFSEA 314 (527)
T ss_pred HHHHHhcCCeEEECCC----CCHHHHHHHHHHhCCeEEEecHHHHHHHHhCcccc-----CCCccceEEEEEcCCCCCHH
Confidence 7888999999887543 27899999999999999999999998877654322 24678999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCC-CCceEEEEcCCCCcccCCCC
Q 037878 775 TVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQND-PDVDIRIVNPETSEEIGEPG 853 (2280)
Q Consensus 775 l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~-pg~~v~Ivd~~~~~~~~p~G 853 (2280)
+.+++.+.+ +..+++.||+||+++..+.. .. + .....+++|+|+ ++.+++|+|+++ ..++.|
T Consensus 315 ~~~~~~~~~------g~~~~~~YG~tE~~~~~~~~-~~--~------~~~~~~~~G~~~~~~~~v~i~d~~g--~~~~~g 377 (527)
T TIGR02275 315 AARRVPAVF------GCQLQQVFGMAEGLVNYTRL-DD--P------AEIIFTTQGRPMSPDDEVRVVDDHG--NPVAPG 377 (527)
T ss_pred HHHHHHHHh------CCeEEeeeccCccCccccCC-CC--c------cccccccCCCCCCCCceEEEECCCC--CCCCCC
Confidence 999998864 46799999999976433221 11 0 112346789999 589999999775 345799
Q ss_pred CeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHH
Q 037878 854 KEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTV 932 (2280)
Q Consensus 854 ~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L 932 (2280)
+.|||+++|+.++.||+++|+.|++.|.. ++||+|||+++++ ||.++++||.||+||++|++|+|.|||++|
T Consensus 378 ~~Gei~v~g~~~~~gY~~~~~~~~~~~~~-------dg~~~TGDl~~~~~~g~l~~~gR~~d~i~~~G~~v~~~eiE~~l 450 (527)
T TIGR02275 378 ETGMLLTRGPYTFRGYYKAPEHNAAAFDA-------EGFYYTGDLVRLTPEGYIVVVGRAKDQINRGGEKIAAEEIENLL 450 (527)
T ss_pred CceEEEecCCccchhhcCChhHhHhhcCc-------CCCEEcCceEEEcCCccEEEEecccceeecCCEEECHHHHHHHH
Confidence 99999999999999999999999988854 4899999999996 999999999999999999999999999999
Q ss_pred HhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHH-HHHhcCcceeEEEEecCC
Q 037878 933 ESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTR-VVEEHGVTVASVKLIKPR 1011 (2280)
Q Consensus 933 ~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~-l~~~~~~~~~~~~lv~~~ 1011 (2280)
.++|+|.+ ++|++.+++..+ +...++++ ..++.....++.+.++++ ++. ++.| ..+..++
T Consensus 451 ~~~~~v~~---~~v~~~~~~~~~----------~~~~a~vv--~~~~~~~~~~l~~~l~~~~l~~-~~~P---~~i~~v~ 511 (527)
T TIGR02275 451 LAHPAVHD---AALVSMPDELLG----------EKSCAFIV--VRDPALKAAQLRRFLRERGLAE-YKLP---DRVEFID 511 (527)
T ss_pred HhCCCceE---EEEEecCCcccc----------cEEEEEEE--ECCCCCCHHHHHHHHHhCCCcc-ccCC---CEEEEec
Confidence 99999975 888988765332 22223332 223323334555555553 332 4444 4455558
Q ss_pred CccCCCCcccchHHH
Q 037878 1012 TMSKTTSGKIKRFEC 1026 (2280)
Q Consensus 1012 ~lP~t~sGKvdR~~L 1026 (2280)
+||+|++||++|++|
T Consensus 512 ~iP~t~sGKv~r~~L 526 (527)
T TIGR02275 512 SLPLTAVGKIDKKAL 526 (527)
T ss_pred cCCCCCccceeHHhc
Confidence 999999999999875
No 81
>PRK07656 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.8e-51 Score=545.56 Aligned_cols=493 Identities=24% Similarity=0.329 Sum_probs=383.7
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.|+..+.. .|+++|+.+.+ +++||+||.+++.++|+.|.+. |+++||+|+++++|++++++++
T Consensus 4 ~~~i~~~l~~~~~~--~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~---gv~~g~~V~l~~~~~~~~~~~~ 72 (513)
T PRK07656 4 WMTLPELLARAARR--FGDKEAYVFGD------QRLTYAELNARVRRAAAALAAL---GIGKGDRVAIWAPNSPHWVIAA 72 (513)
T ss_pred cccHHHHHHHHHHH--CCCCeEEEeCC------CceeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCChHHHHHH
Confidence 35788888888876 48999987632 5799999999999999999988 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCcccc-c--cccc------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLHT-D--SWVK------ 616 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~~-~--~~~~------ 616 (2280)
+||+++|++++|+++..+.++ +..+++++++++++++.......... ..+....+.. . ....
T Consensus 73 la~~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (513)
T PRK07656 73 LGALKAGAVVVPLNTRYTADE-------AAYILARGDAKALFVLGLFLGVDYSATTRLPALEHVVICETEEDDPHTEKMK 145 (513)
T ss_pred HHHHhcCeEEEecCcccCHHH-------HHHHHhhcCceEEEEchhhHHHHHHHHhccCCccEEEEEcCcccccCccccc
Confidence 999999999999999998877 78999999999999976543322110 0111110000 0 0000
Q ss_pred cccccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHH
Q 037878 617 NSKNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 617 ~~~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
...... ...........++++++|+|||||||.||+|.++|+++.+.+......++..+++++++++|++|++++...
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (513)
T PRK07656 146 TFTDFLAAGDPAERAPEVDPDDVADILFTSGTTGRPKGAMLTHRQLLSNAADWAEYLGLTEGDRYLAANPFFHVFGYKAG 225 (513)
T ss_pred cHHHHHhcCCCCCCcCCCCCCceEEEEeCCCCCCCCCEEEEecHHHHHHHHHHHHhhCCCCCCeEEEccchHHHHHHHHH
Confidence 000000 000112334577899999999999999999999999999999888888899999999999999999999888
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHH
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQT 774 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~ 774 (2280)
++.++..|+++++.+. .++..+++.++++++|++.++|.++..+.+..... ..+++++|.+++||++++++
T Consensus 226 ~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~-----~~~~~~l~~v~~~g~~~~~~ 296 (513)
T PRK07656 226 VNAPLMRGATILPLPV----FDPDEVFRLIETERITVLPGPPTMYNSLLQHPDRS-----AEDLSSLRLAVTGAASMPVA 296 (513)
T ss_pred HHHHHHcCceEEecCc----CCHHHHHHHHHHhCCeEEechHHHHHHHHcCCCcC-----CCCccceeeEEecCCCCCHH
Confidence 9999999999887542 38999999999999999999999998887653322 24678999999999999999
Q ss_pred HHHHHHHHhcCCCCCCc-ccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCC
Q 037878 775 TVKRFVELTRPFGLSQG-VMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPG 853 (2280)
Q Consensus 775 l~~~~~~~~~~~g~~~~-~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G 853 (2280)
+.++|.+.+ +. .++|.||+||++.+++........ ....+++|.|+++++++|+|+++ ..++.|
T Consensus 297 ~~~~~~~~~------~~~~~~~~YG~tE~~~~~~~~~~~~~~-------~~~~~~vG~~~~~~~~~i~d~~~--~~~~~g 361 (513)
T PRK07656 297 LLERFESEL------GVDIVLTGYGLSEASGVTTFNRLDDDR-------KTVAGTIGTAIAGVENKIVNELG--EEVPVG 361 (513)
T ss_pred HHHHHHHHc------CCCceEeEEccccCCCceeecCccccc-------cccCCCccccCCCcEEEEECCCC--CCCCCC
Confidence 999998874 34 799999999998766543321110 11146789999999999999774 445799
Q ss_pred CeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHH
Q 037878 854 KEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTV 932 (2280)
Q Consensus 854 ~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L 932 (2280)
+.|||+++|+.++.||+++++.+...|.. ++||+|||+|+++ ||.++++||+||+||++|+||+|.|||++|
T Consensus 362 ~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~~~~~tGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l 434 (513)
T PRK07656 362 EVGELLVRGPNVMKGYYDDPEATAAAIDA-------DGWLHTGDLGRLDEEGYLYIVDRKKDMFIVGGFNVYPAEVEEVL 434 (513)
T ss_pred CceEEEEEcchhhhhhcCCHHHHhhhhcc-------CCceeccceEEEcCCeeEEEEecccceEEeCCEEeCHHHHHHHH
Confidence 99999999999999999999998877742 4899999999996 999999999999999999999999999999
Q ss_pred HhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCC
Q 037878 933 ESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPR 1011 (2280)
Q Consensus 933 ~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~ 1011 (2280)
.+++++.+ ++|++.+++..+ ....+++. ..++. ....++.+.++++++. +++| ..++.++
T Consensus 435 ~~~~~i~~---~~v~~~~~~~~g----------~~~~~~v~--~~~~~~~~~~~l~~~~~~~l~~-~~~p---~~i~~v~ 495 (513)
T PRK07656 435 YEHPAVAE---AAVIGVPDERLG----------EVGKAYVV--LKPGAELTEEELIAYCREHLAK-YKVP---RSIEFLD 495 (513)
T ss_pred HhCCCeeE---EEEEecCCcccC----------ceEEEEEE--ECCCCCCCHHHHHHHHHhhccc-ccCC---CEEEEec
Confidence 99999865 788887664322 12222222 22222 2224566666666654 3433 4455568
Q ss_pred CccCCCCcccchHHHHH
Q 037878 1012 TMSKTTSGKIKRFECLK 1028 (2280)
Q Consensus 1012 ~lP~t~sGKvdR~~L~~ 1028 (2280)
+||+|++||++|++|++
T Consensus 496 ~iP~t~~gK~~r~~l~~ 512 (513)
T PRK07656 496 ELPKNATGKVLKRALRE 512 (513)
T ss_pred CCCCCCccceeHHHHhc
Confidence 99999999999998754
No 82
>PRK05620 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=7.6e-51 Score=551.32 Aligned_cols=519 Identities=18% Similarity=0.229 Sum_probs=383.5
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLT-SRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~-~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
.++.+++++++... |++.|+.+.++. .+.+||+||.++++++|++|++ . |+++||+|+++++|+.++++++
T Consensus 10 ~~~~~~l~~~a~~~--~~~~a~~~~~~~---~~~~Ty~el~~~~~~la~~L~~~~---g~~~gd~V~~~~~n~~e~~~~~ 81 (576)
T PRK05620 10 LSLTRILEYGSTVH--GDTTVTTWGGAE---QEQTTFAAIGARAAALAHALHDEL---GITGDQRVGSMMYNCAEHLEVL 81 (576)
T ss_pred CcHHHHHHHHHHhC--CCceEEEEcCCc---eEEEeHHHHHHHHHHHHHHHHHhc---CCCCCCEEEEEeCCCHHHHHHH
Confidence 47889999998764 889998864322 3689999999999999999986 6 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCcc-cccc-cccc------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWL-HTDS-WVKN------ 617 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~-~~~~-~~~~------ 617 (2280)
+||+++|++++|+++..+.++ +.++++.++++.++++......+... ..+....+ ..+. ....
T Consensus 82 lA~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ 154 (576)
T PRK05620 82 FAVACMGAVFNPLNKQLMNDQ-------IVHIINHAEDEVIVADPRLAEQLGEILKECPCVRAVVFIGPSDADSAAAHMP 154 (576)
T ss_pred HHHHhcCCEEeecccccCHHH-------HHHHHhccCCcEEEEChhhHHHHHHHHhhCccccEEEEecCcccccchhccc
Confidence 999999999999999998877 88999999999999986544322110 00111100 0000 0000
Q ss_pred -------cccc--ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHH--HHHcCCCCCcEEEEEcCch
Q 037878 618 -------SKNL--LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLM--RKRYKSTSKTVLVSWLPQY 686 (2280)
Q Consensus 618 -------~~~~--~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~--~~~~~~~~~d~~l~~~pl~ 686 (2280)
.... ............++++++++|||||||.||||+++|+++....... ...+++..++++++++|++
T Consensus 155 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~~~~~~l~~~pl~ 234 (576)
T PRK05620 155 EGIKVYSYEALLDGRSTVYDWPELDETTAAAICYSTGTTGAPKGVVYSHRSLYLQSLSLRTTDSLAVTHGESFLCCVPIY 234 (576)
T ss_pred cccccccHHHHhhcCCCcCCCCCCCccceeEEEECCCCCCCCceEEEEcHHHHHHHHHhhhhhhcCCCCCCeEEEeCChH
Confidence 0000 0000111233567899999999999999999999999986554432 3356788999999999999
Q ss_pred hhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEE
Q 037878 687 HDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMV 766 (2280)
Q Consensus 687 h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~ 766 (2280)
|++++. ..+.++..|+++++..+ .+ +|..+++.++++++|++..+|.++..++....... .+..++|.+++
T Consensus 235 h~~g~~-~~~~~l~~g~~~~~~~~-~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-----~~~~~l~~~~~ 305 (576)
T PRK05620 235 HVLSWG-VPLAAFMSGTPLVFPGP-DL--SAPTLAKIIATAMPRVAHGVPTLWIQLMVHYLKNP-----PERMSLQEIYV 305 (576)
T ss_pred HhhhhH-HHHHHHhcCceEEecCC-CC--CHHHHHHHHHHhcCceeeecCHHHHHHHHHhhccC-----cccCceeEEEE
Confidence 999974 56788889999887653 33 89999999999999999999999887765432221 23457999999
Q ss_pred ecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCC
Q 037878 767 AAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETS 846 (2280)
Q Consensus 767 gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~ 846 (2280)
||+++++++.++|.+.+ ++++++.||+||++..++....... ..... ......++|++.++++++|+|+ +.
T Consensus 306 gG~~~~~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~~-~~~~~-~~~~~~~~G~~~~~~~~~i~~~-g~ 376 (576)
T PRK05620 306 GGSAVPPILIKAWEERY------GVDVVHVWGMTETSPVGTVARPPSG-VSGEA-RWAYRVSQGRFPASLEYRIVND-GQ 376 (576)
T ss_pred cCCCCCHHHHHHHHHHh------CCceeeeccccccccceeeeccCCc-ccccc-ccccccccCCcCCceeEEEecC-Cc
Confidence 99999999999998764 4679999999999876554321110 00000 0011236789999999999996 32
Q ss_pred cccCCCCCeeEEEEcCCCcccccCCCchhh----HHHHhhhccC-----CCCCceeecCcEEEEE-CCeEEEEecCCCeE
Q 037878 847 EEIGEPGKEGEVWISSPSAGIGYWGREELS----QITFRNELQN-----NRGRKYTRTGDLGRII-DGKFFITGRIKDLI 916 (2280)
Q Consensus 847 ~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t----~~~f~~~~~~-----~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~I 916 (2280)
....+.|+.|||+++|+.++.||+++|+.| +..|..+++. ...++||+|||+++++ ||.++|+||+||+|
T Consensus 377 ~~~~~~~~~Gel~v~g~~~~~gY~~~~~~t~~~~~~~f~~~~~~~~~~~~~~~g~~~TGD~~~~~~dg~l~~~GR~~d~i 456 (576)
T PRK05620 377 VMESTDRNEGEIQVRGNWVTASYYHSPTEEGGGAASTFRGEDVEDANDRFTADGWLRTGDVGSVTRDGFLTIHDRARDVI 456 (576)
T ss_pred cccCCCCCceEEEEEcCcccccccCCccccccccccccccccchhhhcccccCCcEecCceEEEcCCceEEEEechhhhh
Confidence 221235789999999999999999999988 6666543321 1235899999999996 99999999999999
Q ss_pred EECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC----CHHHHHHHHH
Q 037878 917 IVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV----DKDVIENIKT 992 (2280)
Q Consensus 917 Ki~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~----~~~l~~~l~~ 992 (2280)
|++|+||+|.|||++|.+||.|.+ |+|++.+++..++ ...++++. .++... ..++++.+++
T Consensus 457 ~~~G~~i~~~eIE~~l~~~p~v~~---~~vv~~~~~~~g~---------~~~a~v~~---~~~~~~~~~~~~~l~~~l~~ 521 (576)
T PRK05620 457 RSGGEWIYSAQLENYIMAAPEVVE---CAVIGYPDDKWGE---------RPLAVTVL---APGIEPTRETAERLRDQLRD 521 (576)
T ss_pred hcCCEEEcHHHHHHHHhcCCCceE---EEEEeccCCCcCc---------eeEEEEEe---cCCCCcccccHHHHHHHHHh
Confidence 999999999999999999999875 8899887764321 22223322 222211 2455555555
Q ss_pred HHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCCCCCCC
Q 037878 993 RVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLNTVP 1039 (2280)
Q Consensus 993 ~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~~lp 1039 (2280)
+|+. .+.|..++.+++||+|.+||+||++|++++.++.+..++
T Consensus 522 ~L~~----~~~P~~i~~v~~~P~t~~GKv~r~~L~~~~~~~~~~~~~ 564 (576)
T PRK05620 522 RLPN----WMLPEYWTFVDEIDKTSVGKFDKKDLRQHLADGDFEIIK 564 (576)
T ss_pred hCcc----ccCCeEEEEeccCCCCCcccCcHHHHHHHHhcCCccEEE
Confidence 5554 344455566699999999999999999999887665443
No 83
>PRK07768 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.7e-50 Score=543.26 Aligned_cols=522 Identities=27% Similarity=0.408 Sum_probs=388.9
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
++.+.+..++... |+..++...+ + .+.+||.||+++++++|++|.+. |+++||+|+++++|+++++++++|
T Consensus 3 ~~~~~~~~~~~~~--~~~~~~~~~~--~--~~~~ty~el~~~v~~~a~~L~~~---g~~~gd~V~l~~~~~~~~~~~~la 73 (545)
T PRK07768 3 RFTEKMYANARTS--PRGMVTGEPD--A--PVRHTWGEVHERARRIAGGLAAA---GVGPGDAVAVLAGAPVEIAPTAQG 73 (545)
T ss_pred hHHHHHHHHhhCC--CcceEEecCC--C--ceEecHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCchHHHHHHHH
Confidence 4566666777663 6777764433 2 25799999999999999999998 999999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccccccccc
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCF 629 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (2280)
|+++|++++|+++..+.++....+.++..+++.++++.++++.................+..+++... .....
T Consensus 74 ~~~~g~v~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~l~~~-------~~~~~ 146 (545)
T PRK07768 74 LWMRGASLTMLHQPTPRTDLAVWAEDTLRVIGMIGAKAVVVGEPFLAAAPVLEEKGIRVLTVADLLAA-------DPIDP 146 (545)
T ss_pred HHHcCccccccCCCCCcchhHHHHHHHHHHHHhCCCCEEEecchhhhhhhhhcccCCceeehhhhccc-------CCCCc
Confidence 99999999999998888776666667788899999999998765433221111011112222222111 01112
Q ss_pred CCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCC-cEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 630 TESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSK-TVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 630 ~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~-d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
....++++++|+|||||||+||||+++|+++...+......+++..+ |++++++|++|+++++..+..++..|+++++.
T Consensus 147 ~~~~~~~~a~i~~TSGtTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~v~~ 226 (545)
T PRK07768 147 VETGEDDLALMQLTSGSTGSPKAVQITHGNLYANAEAMFVAAEFDVETDVMVSWLPLFHDMGMVGFLTVPMYFGAELVKV 226 (545)
T ss_pred CCCCCCCEEEEEeCCCCCCCCceEEEcHHHHHHHHHHHHHhcCCCCCCceeEEeCCCccchHHHHHHHHHHHCCceEEEe
Confidence 24567999999999999999999999999999988888788888776 89999999999999987788899999999988
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
.+..+..+|..+.+.+++++++++..+|..+..+......... ....+++++|.+++||+++++++.+++.+....+|.
T Consensus 227 ~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~~~~~lr~~~~~g~~~~~~~~~~~~~~~~~~g~ 305 (545)
T PRK07768 227 TPMDFLRDPLLWAELISKYRGTMTAAPNFAYALLARRLRRQAK-PGAFDLSSLRFALNGAEPIDPADVEDLLDAGARFGL 305 (545)
T ss_pred CHHHHHHhHHHHHHHHHHhCCEEEECchHHHHHHHHHHhcccc-ccCCCchheeeEEeccCCCCHHHHHHHHHHHHhcCC
Confidence 7766666899999999999999998888888777654422211 112568899999999999999999999886555666
Q ss_pred CCcccccccCccccccceecccCCCCce--e-------------e-cCCCceeeccccCCCCCceEEEEcCCCCcccCCC
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPI--I-------------L-DWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEP 852 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~--~-------------~-~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~ 852 (2280)
+...+++.||+||++..++......... . . ........+++|+|+++++++|+|+++ ..++.
T Consensus 306 ~~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~~~i~~~~~--~~~~~ 383 (545)
T PRK07768 306 RPEAILPAYGMAEATLAVSFSPCGAGLVVDEVDADLLAALRRAVPATKGNTRRLATLGPPLPGLEVRVVDEDG--QVLPP 383 (545)
T ss_pred CcccccccccccccceEEEccCCCCCcceeeechhHhhccCceeccCCCCcceEEeccCCCCCCEEEEECCCC--CCCCC
Confidence 6667999999999987654432210000 0 0 000112346799999999999999765 34579
Q ss_pred CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 853 GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 853 G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
|+.|||+++|+.+++||+++++..... ..++||+|||+++++ ||.++|+||+||+||++|++|+|.|||++
T Consensus 384 g~~Gel~v~~~~~~~gy~~~~~~~~~~--------~~~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~ 455 (545)
T PRK07768 384 RGVGVIELRGESVTPGYLTMDGFIPAQ--------DADGWLDTGDLGYLTEEGEVVVCGRVKDVIIMAGRNIYPTDIERA 455 (545)
T ss_pred CCEEEEEEccCcccccccCCCCCcccc--------cCCCeeeccceEEEecCCEEEEEccccceEEECCEecCHHHHHHH
Confidence 999999999999999999865433211 235799999999997 89999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC--CHHHHHHHHHHHHHhcCcceeEEEEec
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV--DKDVIENIKTRVVEEHGVTVASVKLIK 1009 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~--~~~l~~~l~~~l~~~~~~~~~~~~lv~ 1009 (2280)
|.++|+|.+ ++|++++.+. ......++++++....... ..++.+.+++.+.+.+......+.++.
T Consensus 456 l~~~~~v~~---~~vv~~~~~~----------~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~~~l~~~~~~~p~~v~~v~ 522 (545)
T PRK07768 456 AARVEGVRP---GNAVAVRLDA----------GHSREGFAVAVESNAFEDPAEVRRIRHQVAHEVVAEVGVRPRNVVVLG 522 (545)
T ss_pred HHhCccccc---ceEEEEEecC----------CCCceEEEEEEEecccccHHHHHHHHHHHHHHHHHHhCCCccEEEEeC
Confidence 999999975 4555432210 0111122333333222111 134566777777766543334566666
Q ss_pred CCCccCCCCcccchHHHHHHhh
Q 037878 1010 PRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 1010 ~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.++||+|++||++|++|+++|.
T Consensus 523 ~~~lP~t~~GKi~r~~l~~~~~ 544 (545)
T PRK07768 523 PGSIPKTPSGKLRRANAAELVT 544 (545)
T ss_pred CCcCCCCCchhHHHHHHHHhcC
Confidence 6799999999999999988753
No 84
>PRK08316 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.7e-50 Score=543.71 Aligned_cols=497 Identities=24% Similarity=0.296 Sum_probs=389.6
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++...+++. |+++|+.+.+ +.+||+||.++++++|..|.+. |+++||+|+++++|+.++++++
T Consensus 10 ~~~l~~~l~~~a~~~--~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~---gi~~~~~V~l~~~~~~~~~~~~ 78 (523)
T PRK08316 10 RQTIGDILRRSARRY--PDKTALVFGD------RSWTYAELDAAVNRVAAALLDL---GLKKGDRVAALGHNSDAYALLW 78 (523)
T ss_pred CCCHHHHHHHHHHHC--CCCeEEEECC------ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHH
Confidence 457899998888764 7899987643 5899999999999999999988 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCccccc----------cccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHTD----------SWVK 616 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~~----------~~~~ 616 (2280)
+||+++|++++|+++..+.++ +..+++.+++++++++......+.... .......... .+..
T Consensus 79 ~a~~~~G~~~v~l~~~~~~~~-------i~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (523)
T PRK08316 79 LACARAGAVHVPVNFMLTGEE-------LAYILDHSGARAFLVDPALAPTAEAALALLPVDTLILSLVLGGREAPGGWLD 151 (523)
T ss_pred HHHHhcCcEEEecccccCHHH-------HHHHHHhCCCCEEEEccchHHHHHHHhhhcCccceeeeecccccccccchhh
Confidence 999999999999999998877 788999999999999876544332100 0000000000 0000
Q ss_pred cc-cccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHH
Q 037878 617 NS-KNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGL 695 (2280)
Q Consensus 617 ~~-~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i 695 (2280)
.. ................+++++|+|||||||.||+|.+||++++..+......+++.++++++..+|++|.+++...+
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~ 231 (523)
T PRK08316 152 FADWAEAGSVAEPDVELADDDLAQILYTSGTESLPKGAMLTHRALIAEYVSCIVAGDMSADDIPLHALPLYHCAQLDVFL 231 (523)
T ss_pred HHHHHhcCCCccCccCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCCceEEEccCCchhhhHHHHH
Confidence 00 00000011122345678999999999999999999999999998888888888899999999999999999987667
Q ss_pred HHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHH
Q 037878 696 FTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTT 775 (2280)
Q Consensus 696 ~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l 775 (2280)
+.++..|+++++.+. .++..+++.++++++|++.++|.++..+.+.... ...+++++|.+++||++++.++
T Consensus 232 ~~~~~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~l~~~~~gg~~~~~~~ 302 (523)
T PRK08316 232 GPYLYVGATNVILDA----PDPELILRTIEAERITSFFAPPTVWISLLRHPDF-----DTRDLSSLRKGYYGASIMPVEV 302 (523)
T ss_pred HHHHhcCceEEEecC----CCHHHHHHHHHHhCCeEEEeCHHHHHHHHcCccc-----ccCCcccceEEEEcCCcCCHHH
Confidence 778899999998753 2799999999999999999999998887654322 2256789999999999999999
Q ss_pred HHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCe
Q 037878 776 VKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKE 855 (2280)
Q Consensus 776 ~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~ 855 (2280)
.+++.+.+ +++.+++.||+||++.+++....... ....+++|+|+++++++|+|+++ ..++.|+.
T Consensus 303 ~~~~~~~~-----~~~~~~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~i~~~~~--~~~~~g~~ 367 (523)
T PRK08316 303 LKELRERL-----PGLRFYNCYGQTEIAPLATVLGPEEH--------LRRPGSAGRPVLNVETRVVDDDG--NDVAPGEV 367 (523)
T ss_pred HHHHHHHc-----CCCceeeeecccccCccccccCcccc--------ccccCCcccCCCCcEEEEEcCCC--CCCCCCCc
Confidence 99999875 46789999999999876654321111 12347889999999999999775 34578999
Q ss_pred eEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHh
Q 037878 856 GEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVES 934 (2280)
Q Consensus 856 GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~ 934 (2280)
|||+++|+.++.||+++++.+++.|. ++||+|||+|+++ ||.++++||+||+||++|++|+|.|||+.|.+
T Consensus 368 Gei~v~~~~~~~~y~~~~~~~~~~~~--------~~~~~TGDl~~~~~~g~l~i~gR~~~~i~~~G~~i~~~~iE~~l~~ 439 (523)
T PRK08316 368 GEIVHRSPQLMLGYWDDPEKTAEAFR--------GGWFHSGDLGVMDEEGYITVVDRKKDMIKTGGENVASREVEEALYT 439 (523)
T ss_pred ceEEEECCchhhhhcCCHHHHHHHhh--------CCCeeccceEEEcCCceEEEecccccEEEeCCeEECHHHHHHHHHh
Confidence 99999999999999999999999884 3899999999996 99999999999999999999999999999999
Q ss_pred ccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCc
Q 037878 935 STEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTM 1013 (2280)
Q Consensus 935 ~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~l 1013 (2280)
+++|.+ ++|++.+++..+ +...+++ +..++.. ..+++.+.+++++.. ++.| ..++.++++
T Consensus 440 ~~~v~~---~~v~~~~~~~~~----------~~~~~~v--~~~~~~~~~~~~l~~~~~~~l~~-~~~p---~~i~~v~~~ 500 (523)
T PRK08316 440 HPAVAE---VAVIGLPDPKWI----------EAVTAVV--VPKAGATVTEDELIAHCRARLAG-FKVP---KRVIFVDEL 500 (523)
T ss_pred CCChhe---EeEecccCcccC----------CeEEEEE--EECCCCCCCHHHHHHHHHHhccc-CCCC---cEEEEecCC
Confidence 999865 888887765322 2222222 2232222 224566666666653 4444 445555999
Q ss_pred cCCCCcccchHHHHHHhhcC
Q 037878 1014 SKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1014 P~t~sGKvdR~~L~~~~~~~ 1033 (2280)
|+|++||++|++|+++|.+.
T Consensus 501 p~t~~gKi~r~~l~~~~~~~ 520 (523)
T PRK08316 501 PRNPSGKILKRELRERYAGA 520 (523)
T ss_pred CCCCccceeHHHHHHHHHhh
Confidence 99999999999999998643
No 85
>PRK07867 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.8e-50 Score=540.56 Aligned_cols=492 Identities=19% Similarity=0.229 Sum_probs=372.6
Q ss_pred CCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 467 ELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 467 ~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
...++.++++..+. ++++++.+.+ +.+||+||.++++++|+.|+++. |++++++|+++++|+++++++
T Consensus 3 ~~~~~~~~l~~~a~----~~~~a~~~~~------~~~Ty~el~~~v~~lA~~L~~~~--~~~~~~~V~i~~~n~~~~~~~ 70 (529)
T PRK07867 3 SAPTVAELLLPLAE----DDDRGLYFED------SFTSWREHIRGSAARAAALRARL--DPTRPPHVGVLLDNTPEFSLL 70 (529)
T ss_pred ccccHHHHHHHhcc----cCCceEEECC------cEEeHHHHHHHHHHHHHHHHHhh--CCCCCCEEEEECCCCHHHHHH
Confidence 34567888877664 4778876532 57999999999999999999863 689999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccc-ccccccccccc
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSW-VKNSKNLLAEN 625 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 625 (2280)
++||+++|++++|+++..+.++ +.++++++++++++++......+.... +....+..+.. ...........
T Consensus 71 ~lA~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~~~~~ 142 (529)
T PRK07867 71 LGAAALSGIVPVGLNPTRRGAA-------LARDIAHADCQLVLTESAHAELLDGLD-PGVRVINVDSPAWADELAAHRDA 142 (529)
T ss_pred HHHHHhcCCEEEEecCCCChHH-------HHHHHHhCCCeEEEECHhHHHHHHhhc-cCceEEEeccccHHHHhcccCCC
Confidence 9999999999999999999888 889999999999999876544322111 11111111110 00000000011
Q ss_pred ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceE
Q 037878 626 VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTA 705 (2280)
Q Consensus 626 ~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~ 705 (2280)
........++++++|+|||||||.||||+++|+++...+......+++.++|+++..+|++|..+++..++.++..|+++
T Consensus 143 ~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~~~~~~~~~~l~~G~~~ 222 (529)
T PRK07867 143 EPPFRVADPDDLFMLIFTSGTSGDPKAVRCTHRKVASAGVMLAQRFGLGPDDVCYVSMPLFHSNAVMAGWAVALAAGASI 222 (529)
T ss_pred CCCcccCCccceEEEEECCCCCCCCcEEEecHHHHHHHHHHHHHhhCCCcccEEEEecchhHHHHHHHHHHHHHhcCceE
Confidence 11223456799999999999999999999999999988888888889999999999999999999988888899999998
Q ss_pred EEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcC
Q 037878 706 ILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRP 785 (2280)
Q Consensus 706 vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~ 785 (2280)
++.+. .++..+++.++++++|++..+|+.+..++....... ...+++| +++||+++++. ..+|.+.+
T Consensus 223 ~~~~~----~~~~~~~~~i~~~~vt~~~~~p~~~~~ll~~~~~~~-----~~~~~lr-~~~gg~~~~~~-~~~~~~~~-- 289 (529)
T PRK07867 223 ALRRK----FSASGFLPDVRRYGATYANYVGKPLSYVLATPERPD-----DADNPLR-IVYGNEGAPGD-IARFARRF-- 289 (529)
T ss_pred EecCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCCccc-----ccccceE-EEecCCCChHH-HHHHHHHh--
Confidence 88652 278999999999999999999998887765322111 2235678 45688888776 56777653
Q ss_pred CCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCC-----------
Q 037878 786 FGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGK----------- 854 (2280)
Q Consensus 786 ~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~----------- 854 (2280)
++.+++.||+||+++.++.... ...+++|.|+++ ++|+|++++.. ++.|+
T Consensus 290 ----g~~l~~~YG~TE~~~~~~~~~~------------~~~~~~g~~~~~--~~i~~~~~~~~-~~~g~~~~~~~~~~~~ 350 (529)
T PRK07867 290 ----GCVVVDGFGSTEGGVAITRTPD------------TPPGALGPLPPG--VAIVDPDTGTE-CPPAEDADGRLLNADE 350 (529)
T ss_pred ----CCcEEEeecccccccccccCCC------------CCCCCcCCCCCC--EEEEECCCCCC-CCCCccccccccccCC
Confidence 4679999999999865442210 113568999998 77888665433 46787
Q ss_pred -eeEEEE-cCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 855 -EGEVWI-SSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 855 -~GEL~i-~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
.|||++ +|++++.||+|+|+.|++.|. ++||+|||+++++ ||.++|+||+||+||++|+||+|.|||++
T Consensus 351 ~~Gel~i~~g~~~~~gy~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~p~eIE~~ 422 (529)
T PRK07867 351 AIGELVNTAGPGGFEGYYNDPEADAERMR--------GGVYWSGDLAYRDADGYAYFAGRLGDWMRVDGENLGTAPIERI 422 (529)
T ss_pred cceEEEEecCCcccccccCChHhhhhhhc--------CCeEeeccEEEEeCCCcEEEeccccCeEEECCEEeCHHHHHHH
Confidence 999999 999999999999999998884 3899999999996 99999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC-HHHHHHHHHHHHHhcCcceeEEEEecC
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-KDVIENIKTRVVEEHGVTVASVKLIKP 1010 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~~~~~~lv~~ 1010 (2280)
|.++|+|.+ |+|++++++..+ +...++++. .++...+ .++.+.++++ ..++..+.|..+..+
T Consensus 423 l~~~p~V~~---~~V~g~~~~~~g----------~~~~a~vv~--~~~~~~~~~~l~~~~~~~--~~l~~~~~P~~i~~~ 485 (529)
T PRK07867 423 LLRYPDATE---VAVYAVPDPVVG----------DQVMAALVL--APGAKFDPDAFAEFLAAQ--PDLGPKQWPSYVRVC 485 (529)
T ss_pred HHhCCCeeE---EEEEeccCCCCC----------eeEEEEEEE--CCCCCCCHHHHHHHHHhh--ccCCcccCCeEEEEe
Confidence 999999875 899998876433 222222322 2332222 4555555442 012223344455556
Q ss_pred CCccCCCCcccchHHHHHHhhcCCC
Q 037878 1011 RTMSKTTSGKIKRFECLKQFVDGTL 1035 (2280)
Q Consensus 1011 ~~lP~t~sGKvdR~~L~~~~~~~~~ 1035 (2280)
++||+|++||++|++|+++..+...
T Consensus 486 ~~iP~t~~GKv~r~~L~~~~~~~~~ 510 (529)
T PRK07867 486 AELPRTATFKVLKRQLSAEGVDCAD 510 (529)
T ss_pred eccCCCCCcceeHHHHHHhcCCCCC
Confidence 9999999999999999998765543
No 86
>PRK07514 malonyl-CoA synthase; Validated
Probab=100.00 E-value=1.8e-50 Score=540.43 Aligned_cols=492 Identities=25% Similarity=0.370 Sum_probs=380.0
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++...+ . .|++.|+...+ + +.+||+||.++++++|+.|++. |+++||+|+++++|+.+++++++
T Consensus 3 ~~l~~~~~~~~-~--~~~~~a~~~~~--~---~~~Ty~eL~~~~~~la~~L~~~---g~~~gd~v~i~~~~~~e~~v~~l 71 (504)
T PRK07514 3 NNLFDALRAAF-A--DRDAPFIETPD--G---LRYTYGDLDAASARLANLLVAL---GVKPGDRVAVQVEKSPEALALYL 71 (504)
T ss_pred ccHHHHHHHHh-h--CCCCeEEEeCC--C---CEEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHH
Confidence 35677777766 4 37888886532 2 5899999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCC-cccccccccc-cccc--cc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLP-WLHTDSWVKN-SKNL--LA 623 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~-~~~~~~~~~~-~~~~--~~ 623 (2280)
||+++|++++|+++..+.++ +..+++.+++++++++........... ..... ....+..... ..+. ..
T Consensus 72 a~~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (504)
T PRK07514 72 ATLRAGAVFLPLNTAYTLAE-------LDYFIGDAEPALVVCDPANFAWLSKIAAAAGAPHVETLDADGTGSLLEAAAAA 144 (504)
T ss_pred HHHHcCcEEEECCCCCCHHH-------HHHHHHhCCCcEEEEccchhHHHHHhhhccCCceEEEecCCCcccHHHhhhhc
Confidence 99999999999999998887 889999999999999865443221110 00000 1111110000 0000 00
Q ss_pred ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccc
Q 037878 624 ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGS 703 (2280)
Q Consensus 624 ~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~ 703 (2280)
..........+++++||+|||||||.||||++||+++...+......++..++|++++.+|++|..+++..++.++..|+
T Consensus 145 ~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~ 224 (504)
T PRK07514 145 PDDFETVPRGADDLAAILYTSGTTGRSKGAMLSHGNLLSNALTLVDYWRFTPDDVLIHALPIFHTHGLFVATNVALLAGA 224 (504)
T ss_pred CcccCcccCCCCCeEEEEECCCCCCCCcEEEEecHHHHHHHHHHHHHhCCCCccEEEEecchHHHHHHHHHHHHHHhcCc
Confidence 00111234567899999999999999999999999999998888888889999999999999999998888889999999
Q ss_pred eEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHh
Q 037878 704 TAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELT 783 (2280)
Q Consensus 704 ~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~ 783 (2280)
++++.+. .++..+++.+ .++|++..+|.++..++.... ....+++++|.+++||+++++++.++|.+.+
T Consensus 225 ~~~~~~~----~~~~~~~~~i--~~~t~~~~~P~~~~~l~~~~~-----~~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~ 293 (504)
T PRK07514 225 SMIFLPK----FDPDAVLALM--PRATVMMGVPTFYTRLLQEPR-----LTREAAAHMRLFISGSAPLLAETHREFQERT 293 (504)
T ss_pred EEEECCC----CCHHHHHHHH--HhheeeecHHHHHHHHHcCCC-----CCcccccceeeEEecCCCCCHHHHHHHHHHh
Confidence 9988753 3788899988 479999999998877764321 1224578999999999999999999998874
Q ss_pred cCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCC
Q 037878 784 RPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSP 863 (2280)
Q Consensus 784 ~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp 863 (2280)
+.++++.||+||++..++..... ....+++|.|+++++++|+|++++ .++|.|+.|||+|+|+
T Consensus 294 ------~~~~~~~YG~tE~~~~~~~~~~~----------~~~~~~~G~~~~~~~v~i~d~~~~-~~~~~g~~Gel~i~~~ 356 (504)
T PRK07514 294 ------GHAILERYGMTETNMNTSNPYDG----------ERRAGTVGFPLPGVSLRVTDPETG-AELPPGEIGMIEVKGP 356 (504)
T ss_pred ------CCcceeecccccccccccCCccc----------cccCcccccCCCCcEEEEEECCCC-CCCCCCCceEEEEecC
Confidence 45799999999988654422111 112367899999999999996655 4457999999999999
Q ss_pred CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCc
Q 037878 864 SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPG 942 (2280)
Q Consensus 864 ~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~ 942 (2280)
+++.||+++|+.+++.|.. ++||+|||+++++ +|.++++||+||+||++|++|+|.|||++|.++++|.+
T Consensus 357 ~~~~gy~~~~~~~~~~~~~-------~~~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v~~-- 427 (504)
T PRK07514 357 NVFKGYWRMPEKTAEEFRA-------DGFFITGDLGKIDERGYVHIVGRGKDLIISGGYNVYPKEVEGEIDELPGVVE-- 427 (504)
T ss_pred CccccccCCchhhhhhccc-------CCCeeecceEEEcCCccEEEeccccceEEeCCeEECHHHHHHHHHhCCCeeE--
Confidence 9999999999999998863 4799999999996 99999999999999999999999999999999999865
Q ss_pred eeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCccc
Q 037878 943 CCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKI 1021 (2280)
Q Consensus 943 ~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKv 1021 (2280)
++|++++++..+ ....+++. ..++.. ...++.+.+++++.. +++|. .++.++++|+|++||+
T Consensus 428 -~~v~~~~~~~~~----------~~~~~~~~--~~~~~~~~~~~l~~~~~~~l~~-~~~p~---~i~~v~~~p~t~~gK~ 490 (504)
T PRK07514 428 -SAVIGVPHPDFG----------EGVTAVVV--PKPGAALDEAAILAALKGRLAR-FKQPK---RVFFVDELPRNTMGKV 490 (504)
T ss_pred -EEEEeCCCCCcC----------ceEEEEEE--ECCCCCCCHHHHHHHHHhhccc-CCCCc---EEEEeccCCCCCCcce
Confidence 788887664321 22222222 222222 335666777766654 44443 4455589999999999
Q ss_pred chHHHHHHhhc
Q 037878 1022 KRFECLKQFVD 1032 (2280)
Q Consensus 1022 dR~~L~~~~~~ 1032 (2280)
+|++|++++.+
T Consensus 491 ~r~~l~~~~~~ 501 (504)
T PRK07514 491 QKNLLREQYAD 501 (504)
T ss_pred eHHHHHHHHHh
Confidence 99999888654
No 87
>PLN03102 acyl-activating enzyme; Provisional
Probab=100.00 E-value=9.2e-51 Score=548.99 Aligned_cols=499 Identities=20% Similarity=0.224 Sum_probs=359.7
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
+..+++++.++. +|+++|+.+.+ +++||+||+++++++|+.|.+. |+++||+|+|+++|++++++++||
T Consensus 15 ~~~~~l~~~~~~--~p~~~Al~~~~------~~~Ty~eL~~~~~~~a~~L~~~---Gl~~gd~Vai~~~n~~e~~~~~la 83 (579)
T PLN03102 15 TPITFLKRASEC--YPNRTSIIYGK------TRFTWPQTYDRCCRLAASLISL---NITKNDVVSVLAPNTPAMYEMHFA 83 (579)
T ss_pred cHHHHHHHHHHh--CCCCeEEEECC------cEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCcHHHHHHHHH
Confidence 567788888876 48999987532 4799999999999999999998 999999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CC------CCCCcccccccccc----
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SW------PNLPWLHTDSWVKN---- 617 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~------~~~~~~~~~~~~~~---- 617 (2280)
|+++|++++|+++..+.++ +.++++.+++++++++.+........ .. .....+..+.....
T Consensus 84 ~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (579)
T PLN03102 84 VPMAGAVLNPINTRLDATS-------IAAILRHAKPKILFVDRSFEPLAREVLHLLSSEDSNLNLPVIFIHEIDFPKRPS 156 (579)
T ss_pred HHhcCcEEeeccccCCHHH-------HHHHHhccCCeEEEEChhhHHHHHHHHhhccccccccCceEEEecccccccCCc
Confidence 9999999999999998888 88999999999999976544322110 00 00111111110000
Q ss_pred -----cccccccc-c------cccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCc
Q 037878 618 -----SKNLLAEN-V------VCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQ 685 (2280)
Q Consensus 618 -----~~~~~~~~-~------~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl 685 (2280)
........ . .......++|+++|+|||||||.||||+++|+++..........+.....++++..+|+
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~pl 236 (579)
T PLN03102 157 SEELDYECLIQRGEPTPSLVARMFRIQDEHDPISLNYTSGTTADPKGVVISHRGAYLSTLSAIIGWEMGTCPVYLWTLPM 236 (579)
T ss_pred ccccCHHHHHhccCCCCcccccccccCCCCCcEEEEeCCcCCCCCCEEEEecHHHHHHHHHHHhhcCCCCCCeEEecCCh
Confidence 00000000 0 00112456899999999999999999999999975544444444556677889999999
Q ss_pred hhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEE
Q 037878 686 YHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLM 765 (2280)
Q Consensus 686 ~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~ 765 (2280)
+|..++. ..+.++..|+++++... .++..+++.++++++|++.++|+++..+.+..... ..+.++++.++
T Consensus 237 ~h~~g~~-~~~~~~~~g~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-----~~~~~~~~~~~ 306 (579)
T PLN03102 237 FHCNGWT-FTWGTAARGGTSVCMRH----VTAPEIYKNIEMHNVTHMCCVPTVFNILLKGNSLD-----LSPRSGPVHVL 306 (579)
T ss_pred hhhcchh-HHHHHHHhcCcEEeecc----CChHHHHHHHHHcCCeEEEeChHHHHHHHhCcccc-----cCCcccceEEE
Confidence 9999875 45667788888877653 26778999999999999999999998887542211 12345788899
Q ss_pred EecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCC----CceeecCCCceeeccccCCCCCceEEEE
Q 037878 766 VAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQG----KPIILDWQGRVCCGYVDQNDPDVDIRIV 841 (2280)
Q Consensus 766 ~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~----~~~~~~~~g~~~~g~vG~p~pg~~v~Iv 841 (2280)
+||+++++++.+++.+. ++.+++.||+||++..++...... .+...........|..+.|++ .+.++
T Consensus 307 ~gg~~~~~~~~~~~~~~-------g~~i~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~--~v~i~ 377 (579)
T PLN03102 307 TGGSPPPAALVKKVQRL-------GFQVMHAYGLTEATGPVLFCEWQDEWNRLPENQQMELKARQGVSILGLA--DVDVK 377 (579)
T ss_pred ECCCCCCHHHHHHHHHc-------CCeEEeecCccccCccccccccccccccCCcccccccccCCCccccccc--ceEEe
Confidence 99999999998887652 457999999999986443221100 000000000111233444444 45566
Q ss_pred cCCCCcccCCC-CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEEC
Q 037878 842 NPETSEEIGEP-GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVA 919 (2280)
Q Consensus 842 d~~~~~~~~p~-G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~ 919 (2280)
|++.+..+... ++.|||+|+|+++++||||+|+.|++.|. ++||||||+|+++ ||.++|+||+||+||++
T Consensus 378 ~~~~~~~v~~~~~~~GEl~v~g~~~~~GY~~~~~~t~~~f~--------~gw~~TGDlg~~d~dG~l~i~GR~~d~i~~~ 449 (579)
T PLN03102 378 NKETQESVPRDGKTMGEIVIKGSSIMKGYLKNPKATSEAFK--------HGWLNTGDVGVIHPDGHVEIKDRSKDIIISG 449 (579)
T ss_pred ccccccccCCCCCCceEEEEECcchhhhhcCChhhhHhhhc--------cCceecCceEEEcCCCeEEEEeccCcEEEEC
Confidence 75544333222 36899999999999999999999999885 3799999999997 99999999999999999
Q ss_pred CeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-----------CHHHHH
Q 037878 920 GRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-----------DKDVIE 988 (2280)
Q Consensus 920 G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-----------~~~l~~ 988 (2280)
|+||+|.|||++|.+||.|.+ ++|++++++..+ +...++++. .++... ..++++
T Consensus 450 G~~v~p~eIE~~l~~~p~V~~---a~vv~~~~~~~~----------~~~~a~v~~--~~~~~~~~~~~~~~~~~~~~l~~ 514 (579)
T PLN03102 450 GENISSVEVENVLYKYPKVLE---TAVVAMPHPTWG----------ETPCAFVVL--EKGETTKEDRVDKLVTRERDLIE 514 (579)
T ss_pred CEEECHHHHHHHHHhCCCcce---eEEEeccCcccc----------ceeEEEEEe--cCcccccccccccccccHHHHHH
Confidence 999999999999999999876 889998876432 222233322 222111 134555
Q ss_pred HHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 989 NIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 989 ~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
.++++|+. ++ .|..++.+++||+|++||++|++|+++..+
T Consensus 515 ~~~~~L~~-~~---~P~~i~~~~~~P~t~~gKi~r~~L~~~~~~ 554 (579)
T PLN03102 515 YCRENLPH-FM---CPRKVVFLQELPKNGNGKILKPKLRDIAKG 554 (579)
T ss_pred HHHhhccc-cc---CCeEEEEcccCCCCCcccccHHHHHHHHHH
Confidence 55555543 44 444555669999999999999999887543
No 88
>PRK12492 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=1.3e-50 Score=547.22 Aligned_cols=494 Identities=25% Similarity=0.349 Sum_probs=371.8
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++.+++. |+++|+...+ +.+||.||.++++++|+.|.+.. |+++||+|+++++|++++++++
T Consensus 23 ~~~~~~~l~~~~~~~--p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~~--gi~~gd~V~i~~~n~~e~~~~~ 92 (562)
T PRK12492 23 YKSVVEVFERSCKKF--ADRPAFSNLG------VTLSYAELERHSAAFAAYLQQHT--DLVPGDRIAVQMPNVLQYPIAV 92 (562)
T ss_pred cCcHHHHHHHHHHhC--CCCeeEecCC------ceeeHHHHHHHHHHHHHHHHHhc--CCCCCCEEEEECCCCHHHHHHH
Confidence 357888998888764 8888886421 47999999999999999998731 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--C--------------CCCCCcccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--S--------------WPNLPWLHT 611 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~--------------~~~~~~~~~ 611 (2280)
|||+++|++++|+++.++.++ +.++++++++++++++.......... . .+....+..
T Consensus 93 la~~~~G~v~v~~~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (562)
T PRK12492 93 FGALRAGLIVVNTNPLYTARE-------MRHQFKDSGARALVYLNMFGKLVQEVLPDTGIEYLIEAKMGDLLPAAKGWLV 165 (562)
T ss_pred HHHHHcCeEEeccCccCCHHH-------HHHHHhccCceEEEeccccchHHHHhhhccCceEEEeechhhccccccchhc
Confidence 999999999999999998887 88999999999999865332111000 0 000000000
Q ss_pred cc----c------------c--ccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC-
Q 037878 612 DS----W------------V--KNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK- 672 (2280)
Q Consensus 612 ~~----~------------~--~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~- 672 (2280)
.. . . ...................+++++|+|||||||.||||+++|+++...+......+.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~~~ 245 (562)
T PRK12492 166 NTVVDKVKKMVPAYHLPQAVPFKQALRQGRGLSLKPVPVGLDDIAVLQYTGGTTGLAKGAMLTHGNLVANMLQVRACLSQ 245 (562)
T ss_pred ccccccccccccccCCcccccHHHHHhccCCCCCCCCCCCcCCeEEEEeCCCCCCCCceEEEechhHHHHHHHHHHHHhc
Confidence 00 0 0 000000000001122356789999999999999999999999999887766555443
Q ss_pred --------CCC-CcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHH
Q 037878 673 --------STS-KTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMV 743 (2280)
Q Consensus 673 --------~~~-~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~ 743 (2280)
+.. +++++..+|++|.+++...++..+..|+.+++... ..++..+++.++++++|++..+|.++..+.
T Consensus 246 ~~~~~~~~~~~~~~~~~~~~pl~~~~g~~~~~~~~~~~g~~~~~~~~---~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~ 322 (562)
T PRK12492 246 LGPDGQPLMKEGQEVMIAPLPLYHIYAFTANCMCMMVSGNHNVLITN---PRDIPGFIKELGKWRFSALLGLNTLFVALM 322 (562)
T ss_pred ccccccccccCCCeEEEEecchHHHHHHHHHHHHHhhcCceEEEecC---CcCHHHHHHHHHHhCCceeeCcHHHHHHHH
Confidence 222 45778899999999987777888888988776543 137889999999999999999999998876
Q ss_pred HHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCc
Q 037878 744 RRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGR 823 (2280)
Q Consensus 744 ~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~ 823 (2280)
+.... ...+++++|.+++||+++++++.++|.+.+ ++++++.||+||++.+++...... .
T Consensus 323 ~~~~~-----~~~~~~~lr~~~~gG~~~~~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~---------~ 382 (562)
T PRK12492 323 DHPGF-----KDLDFSALKLTNSGGTALVKATAERWEQLT------GCTIVEGYGLTETSPVASTNPYGE---------L 382 (562)
T ss_pred hCcCc-----ccccccceeEEEeccccCCHHHHHHHHHHh------CCceeeccCccccCceeeecCCcc---------c
Confidence 54221 225678999999999999999999998763 578999999999987655432110 1
Q ss_pred eeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-
Q 037878 824 VCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII- 902 (2280)
Q Consensus 824 ~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~- 902 (2280)
...+++|+|+++++++|+|+++ ..++.|+.|||+|+|+.++.||+++|+.|.+.|.. ++||+|||+|+++
T Consensus 383 ~~~~~~G~p~~~~~v~ivd~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~-------~g~~~TGD~g~~~~ 453 (562)
T PRK12492 383 ARLGTVGIPVPGTALKVIDDDG--NELPLGERGELCIKGPQVMKGYWQQPEATAEALDA-------EGWFKTGDIAVIDP 453 (562)
T ss_pred ccCCccceecCCCEEEEECCCC--CCCCCCCceEEEEeCCccccccccCchhhhhcccC-------CCceecCcEEEECC
Confidence 1236789999999999999865 34579999999999999999999999999988742 4899999999997
Q ss_pred CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC
Q 037878 903 DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV 982 (2280)
Q Consensus 903 dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~ 982 (2280)
+|.++|+||+||+||++|++|+|.|||++|.+||.|.+ ++|++.+++..+ ....++++ ..++...
T Consensus 454 ~G~l~i~GR~~~~i~~~G~~i~~~eIE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v~--~~~~~~~ 518 (562)
T PRK12492 454 DGFVRIVDRKKDLIIVSGFNVYPNEIEDVVMAHPKVAN---CAAIGVPDERSG----------EAVKLFVV--ARDPGLS 518 (562)
T ss_pred CCeEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeE---EEEEeccCCCCC----------ceEEEEEE--eCCCCCC
Confidence 99999999999999999999999999999999999865 888887764322 12222222 2222222
Q ss_pred CHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 983 DKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 983 ~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
.+++.+.+++++.. ++ .|..+..+++||+|.+||++|++|+++
T Consensus 519 ~~~i~~~~~~~l~~-~~---~P~~i~~~~~~P~t~~GK~~r~~L~~~ 561 (562)
T PRK12492 519 VEELKAYCKENFTG-YK---VPKHIVLRDSLPMTPVGKILRRELRDI 561 (562)
T ss_pred HHHHHHHHHHhccc-cc---CCcEEEEeccCCCCCCCceeHHHHHhh
Confidence 34556666666554 44 444555669999999999999998764
No 89
>PRK09088 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.2e-50 Score=536.94 Aligned_cols=475 Identities=21% Similarity=0.318 Sum_probs=368.1
Q ss_pred cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCC
Q 037878 484 TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPP 563 (2280)
Q Consensus 484 ~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~ 563 (2280)
.|+++|+....+ + +.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 8 ~p~~~a~~~~~~-~---~~~ty~~l~~~v~~~a~~l~~~---g~~~~~~v~i~~~~~~~~~~~~la~~~~G~~~v~~~~~ 80 (488)
T PRK09088 8 QPQRLAAVDLAL-G---RRWTYAELDALVGRLAAVLRRR---GCVDGERLAVLARNSVWLVALHFACARVGAIYVPLNWR 80 (488)
T ss_pred CCCceEEEecCC-C---cEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHHHHHcCeEEEeeCcc
Confidence 488998865322 2 4799999999999999999988 89999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccCCCCCCCeEEEEec
Q 037878 564 DPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFT 643 (2280)
Q Consensus 564 ~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyT 643 (2280)
.+.++ +..+++++++++++++....... ......+.+...... ..........++++++++||
T Consensus 81 ~~~~~-------~~~~~~~~~~~~ii~~~~~~~~~-------~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~i~~T 143 (488)
T PRK09088 81 LSASE-------LDALLQDAEPRLLLGDDAVAAGR-------TDVEDLAAFIASADA---LEPADTPSIPPERVSLILFT 143 (488)
T ss_pred CCHHH-------HHHHHHhCCCCEEEEcchhhccc-------ccccchhhhhhhccc---cccccCCCCCCCCceEEEeC
Confidence 98887 88999999999999875432210 011111111110000 00111223456899999999
Q ss_pred cCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHH
Q 037878 644 SGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLET 723 (2280)
Q Consensus 644 SGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~ 723 (2280)
|||||.||+|.++|+++...+...........++++++.+|++|.++++..+..++..|+++++.+. + ++..++..
T Consensus 144 SGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~~~~g~~~~~~~~l~~g~~~~~~~~--~--~~~~~~~~ 219 (488)
T PRK09088 144 SGTSGQPKGVMLSERNLQQTAHNFGVLGRVDAHSSFLCDAPMFHIIGLITSVRPVLAVGGSILVSNG--F--EPKRTLGR 219 (488)
T ss_pred CCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEecchHHHHHHHHHHHHHHhcCCEEEEcCC--C--CHHHHHHH
Confidence 9999999999999999988888777777788999999999999999998888899999999887653 2 67777777
Q ss_pred Hh--hcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccc
Q 037878 724 MS--KYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAE 801 (2280)
Q Consensus 724 i~--~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE 801 (2280)
+. ++++|++..+|.++..+.+.... ...+++++|.+++||++++.+.++++.+. ++.+++.||+||
T Consensus 220 ~~~~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~l~~~~~gG~~~~~~~~~~~~~~-------g~~v~~~YG~TE 287 (488)
T PRK09088 220 LGDPALGITHYFCVPQMAQAFRAQPGF-----DAAALRHLTALFTGGAPHAAEDILGWLDD-------GIPMVDGFGMSE 287 (488)
T ss_pred HHhhccCCcEEeeHHHHHHHHHhCcCc-----CccccccceEEEecCCCCCHHHHHHHHHh-------CCceeeeecccc
Confidence 75 48899999999988877643211 12457899999999999999988887753 467999999999
Q ss_pred cccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHh
Q 037878 802 NCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFR 881 (2280)
Q Consensus 802 ~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~ 881 (2280)
++.+.......... ....+++|.|.|+++++|+|+++ ..++.|+.|||+|+|++++.||+|+++.|++.|.
T Consensus 288 ~~~~~~~~~~~~~~-------~~~~~~vG~~~~~~~~~i~d~~~--~~~~~g~~Gel~v~~~~~~~gY~~~~~~~~~~~~ 358 (488)
T PRK09088 288 AGTVFGMSVDCDVI-------RAKAGAAGIPTPTVQTRVVDDQG--NDCPAGVPGELLLRGPNLSPGYWRRPQATARAFT 358 (488)
T ss_pred cccccccCCCcccc-------cccCCccccCCCCcEEEEECCCC--CCCcCCCceEEEEECCccchhhcCChhhhhhhhc
Confidence 98654322111000 11246799999999999999764 3457899999999999999999999999988875
Q ss_pred hhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEecccccccccccc
Q 037878 882 NELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGIS 960 (2280)
Q Consensus 882 ~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~ 960 (2280)
. ++||+|||+|+++ ||.++|+||+||+||++|++|+|.|||++|.++|+|.+ ++|++++++..+
T Consensus 359 ~-------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~i~~~~iE~~l~~~~~v~~---~~v~~~~~~~~g----- 423 (488)
T PRK09088 359 G-------DGWFRTGDIARRDADGFFWVVDRKKDMFISGGENVYPAEIEAVLADHPGIRE---CAVVGMADAQWG----- 423 (488)
T ss_pred C-------CCCeeecceEEEcCCCcEEEeccccceEEeCCEEECHHHHHHHHHhCCCcce---EEEEeCCCccCC-----
Confidence 3 4899999999996 99999999999999999999999999999999999875 888887765322
Q ss_pred ccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcC
Q 037878 961 VSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 961 ~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
+...+++. ..++.. ...++.+.+++++.. +++| ..+..+++||+|++||++|++|++++.+.
T Consensus 424 -----~~~~~~v~--~~~~~~~~~~~l~~~~~~~l~~-~~~p---~~i~~~~~iP~t~~gKi~r~~l~~~~~~~ 486 (488)
T PRK09088 424 -----EVGYLAIV--PADGAPLDLERIRSHLSTRLAK-YKVP---KHLRLVDALPRTASGKLQKARLRDALAAG 486 (488)
T ss_pred -----ceeEEEEE--ECCCCCCCHHHHHHHHHhhCcC-CCCC---CEEEEcccCCCCCCCceeHHHHHHHHHhc
Confidence 11222222 222222 235566666666653 4444 34455699999999999999999987653
No 90
>PRK12582 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=3.4e-51 Score=558.21 Aligned_cols=527 Identities=16% Similarity=0.212 Sum_probs=372.6
Q ss_pred CCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHH
Q 037878 466 PELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVD 545 (2280)
Q Consensus 466 ~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~v 545 (2280)
+...++.++++.++++. |+++|+.+.+.+....+++||+||.++++++|++|++. |+++||+|+++++|++++++
T Consensus 46 ~~~~~l~~~l~~~a~~~--pd~~a~~~~~~~~~~~~~~Ty~el~~~v~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~~~ 120 (624)
T PRK12582 46 PYPRSIPHLLAKWAAEA--PDRPWLAQREPGHGQWRKVTYGEAKRAVDALAQALLDL---GLDPGRPVMILSGNSIEHAL 120 (624)
T ss_pred CcccCHHHHHHHHHHHC--CCchheecccCCCCceEEeEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEecCCCHHHHH
Confidence 34667899999888764 88999876542122347899999999999999999988 99999999999999999999
Q ss_pred HHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccc--hhhccCCCCCCCcccccccc--------
Q 037878 546 AFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYH--SAVRVGSWPNLPWLHTDSWV-------- 615 (2280)
Q Consensus 546 a~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~--~~~~~~~~~~~~~~~~~~~~-------- 615 (2280)
++|||+++|++++|+++.++.... ...++.++++++++++++++.... .............+..+...
T Consensus 121 ~~lA~~~~G~v~vpl~p~~~~~~~--~~~~l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~ 198 (624)
T PRK12582 121 MTLAAMQAGVPAAPVSPAYSLMSH--DHAKLKHLFDLVKPRVVFAQSGAPFARALAALDLLDVTVVHVTGPGEGIASIAF 198 (624)
T ss_pred HHHHHHHcCCeEeeccCccccccC--CHHHHHHHHHhcCCcEEEecCHHHHHHHHHhhhhcCceEEEEcCCCcccccccH
Confidence 999999999999999998875110 011288999999999999875311 11110000011111111000
Q ss_pred cccccccccc--ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCC---CcEEEEEcCchhhhh
Q 037878 616 KNSKNLLAEN--VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTS---KTVLVSWLPQYHDMG 690 (2280)
Q Consensus 616 ~~~~~~~~~~--~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~---~d~~l~~~pl~h~~g 690 (2280)
.......... ........++|+++|+|||||||.||||++||+++++.+......+.... +++++.++|++|.++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~l~~lPl~h~~g 278 (624)
T PRK12582 199 ADLAATPPTAAVAAAIAAITPDTVAKYLFTSGSTGMPKAVINTQRMMCANIAMQEQLRPREPDPPPPVSLDWMPWNHTMG 278 (624)
T ss_pred HHHhhcCCcchhhhhhccCCCCceEEEEEcCCCCCCCceEEeeHHHHHHHHHHHHHhccccCCCCCceEEEechHHHHHh
Confidence 0000000000 00112346789999999999999999999999999988776655555444 579999999999999
Q ss_pred HHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCC
Q 037878 691 LIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEP 770 (2280)
Q Consensus 691 l~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~ 770 (2280)
+...++.++..|+++++.++.........+++.++++++|++.++|.++..+.+....... ....++++||.+++||++
T Consensus 279 ~~~~~~~~l~~G~tvvl~~~~~~~~~~~~~~~~i~~~~~t~~~~vP~~~~~l~~~~~~~~~-~~~~~~~slr~i~~gGa~ 357 (624)
T PRK12582 279 GNANFNGLLWGGGTLYIDDGKPLPGMFEETIRNLREISPTVYGNVPAGYAMLAEAMEKDDA-LRRSFFKNLRLMAYGGAT 357 (624)
T ss_pred HHHHHHHHHhCceEEEEcCCCcccchHHHHHHHHHhcCCeEEeccCHHHHHHHHHHhhCHH-HHHHHhhheeEEEecCCC
Confidence 8878888999999998865321111223456778899999999999999888765432211 112357899999999999
Q ss_pred CCHHHHHHHHHHhc-CCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCccc
Q 037878 771 VRQTTVKRFVELTR-PFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEI 849 (2280)
Q Consensus 771 l~~~l~~~~~~~~~-~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~ 849 (2280)
+++++.++|.+... .+| .++.++|+||+||++.+++..... ....+++|+|+||++++|+
T Consensus 358 l~~~~~~~~~~~~~~~~g-~~~~l~~~YG~TE~~~~~~~~~~~----------~~~~~svG~p~pg~~v~i~-------- 418 (624)
T PRK12582 358 LSDDLYERMQALAVRTTG-HRIPFYTGYGATETAPTTTGTHWD----------TERVGLIGLPLPGVELKLA-------- 418 (624)
T ss_pred CCHHHHHHHHHHHHhhcC-CCceEEeccccccccceeecccCC----------CCCCCCCCcCCCCcEEEEc--------
Confidence 99999999987531 111 235799999999998765432111 1124689999999999985
Q ss_pred CCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEE-E----CCeEEEEecCCCeEEE-CCeee
Q 037878 850 GEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRI-I----DGKFFITGRIKDLIIV-AGRNV 923 (2280)
Q Consensus 850 ~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~-~----dG~l~~~GR~dd~IKi-~G~rI 923 (2280)
+.|+.|||+|+|++++.||||+|+.|++.|.. +|||+|||+|++ + ||+|+|+||+||+||+ +|++|
T Consensus 419 -~~G~~GEl~vrg~~v~~GY~~~p~~t~~~f~~-------dgw~~TGDlg~~~d~~~~~g~l~i~GR~~d~i~~~~G~~i 490 (624)
T PRK12582 419 -PVGDKYEVRVKGPNVTPGYHKDPELTAAAFDE-------EGFYRLGDAARFVDPDDPEKGLIFDGRVAEDFKLSTGTWV 490 (624)
T ss_pred -cCCCceEEEEECCcccccccCCccchhhhcCc-------cCCccccceEEecCCcCCCCceEEeccchhhEecCCCcEe
Confidence 35788999999999999999999999998853 489999999998 3 4899999999999997 79999
Q ss_pred chHHHH--HHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-----CCCHHHHHHHHHHHHH
Q 037878 924 YSADVE--KTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-----PVDKDVIENIKTRVVE 996 (2280)
Q Consensus 924 ~~~EIE--~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-----~~~~~l~~~l~~~l~~ 996 (2280)
+|.||| .++.+||.|.+ |+|++.+++.+++... ++. .++..+. ..++. ...+++.+.++++|.+
T Consensus 491 ~p~~iE~e~~l~~~p~V~~---a~VvG~~~~~~g~lv~--p~~---~~~~~~~-~~~~~~~~~~~~~~~l~~~~~~~l~~ 561 (624)
T PRK12582 491 SVGTLRPDAVAACSPVIHD---AVVAGQDRAFIGLLAW--PNP---AACRQLA-GDPDAAPEDVVKHPAVLAILREGLSA 561 (624)
T ss_pred chHHHHHHHHHhcCcchhe---EEEEcCCCCcEEEEEe--cCH---HHHHHHH-hcCCCCHHHHhcCHHHHHHHHHHHHH
Confidence 999885 68889999976 8999987665432100 000 0000000 01110 1235677888887776
Q ss_pred hc---Ccce-eEEEEecCCCcc------CCCCcccchHHHHHHhhcCCCC
Q 037878 997 EH---GVTV-ASVKLIKPRTMS------KTTSGKIKRFECLKQFVDGTLN 1036 (2280)
Q Consensus 997 ~~---~~~~-~~~~lv~~~~lP------~t~sGKvdR~~L~~~~~~~~~~ 1036 (2280)
.. +... .+..+..++++| +|++||+.|+++++.|.+.+.+
T Consensus 562 ~~~~~~~~~~~~~~~~~~~~~~~~~~g~~t~~~~~~R~~~~~~y~~~i~~ 611 (624)
T PRK12582 562 HNAEAGGSSSRIARALLMTEPPSIDAGEITDKGYINQRAVLERRAALVER 611 (624)
T ss_pred HHhhcCCChhheEEEEEeCCCCCccCCcCCccccccHHHHHHHHHHHHHH
Confidence 32 1111 233333335554 6778889999999999876544
No 91
>cd08153 srpA_like Catalase-like heme-binding proteins similar to the uncharacterized srpA. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to the Synechococcus elongatus PCC 7942 periplasmic protein srpA, of mostly bacterial origin. The plasmid-encoded srpA is regulated by sulfate, but does not seem to function in its uptake or metabolism.
Probab=100.00 E-value=1e-52 Score=506.58 Aligned_cols=270 Identities=21% Similarity=0.251 Sum_probs=236.5
Q ss_pred eecccccccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCC--CcccccccccEEEeeccCCCCCCcce
Q 037878 1711 KVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSAD--DDARIDARGAAIRIFSDLNGNTSSLL 1788 (2280)
Q Consensus 1711 ~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~--~D~~~~~rG~Aik~~~~~~~~~~~~~ 1788 (2280)
..+.|.+||||+|++|+|+|++++++++++++|+ |++|||++||||++|++ +|+.+|+|||||||+.+ ++++|
T Consensus 11 ~~~~R~~HaKG~~~~G~f~v~~~~~~~~~~~~f~-~~~~pv~vRfS~~~g~p~~~D~~~d~rG~AiK~~l~----d~~~~ 85 (295)
T cd08153 11 HPGFRRNHAKGICVSGTFTPSGAAASLSRAPLFS-GGSVPVTGRFSLGGGNPKAPDDAANPRGMALKFRLP----DGEQW 85 (295)
T ss_pred CCccccccCceeeEEEEEEECCCcchhhhccccC-CCceEEEEEeccCCCCCCCCCCCCCCCeEEEEEEcC----CCCeE
Confidence 3379999999999999999999999999999999 89999999999999975 39999999999999854 24579
Q ss_pred eeecccccccccCChhhHHHHHhhccch---------hhhhhccCcchhhhhhhc--ccCCCccccceeeeeeeEEEEEe
Q 037878 1789 DLTLKTGNAFYARTIGDFATWLVCGLAA---------REEHVKRVPHIRDAVWKS--LRLSDSYAEMHYYSNICRLFRFT 1857 (2280)
Q Consensus 1789 D~~~~n~p~f~~~~~~~f~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~--~~~p~s~~~~~y~s~~~~~~~~~ 1857 (2280)
||+|+|+|+||++|+++|++|+++..++ -..++..||.....+... .+.|.||++++|||+|+|+|+|+
T Consensus 86 D~v~~n~pvF~~~~~~~f~~~~~a~~~~~~~~~~~~~~~~f~~~~P~~~~~~~~~~~~~~p~s~~~~~y~s~~~f~f~~~ 165 (295)
T cd08153 86 RMVMNSFPVFPVRTPEEFLALLKAIAPDATGKPDPAKLKAFLAAHPEAAAFLAWIKTAPPPASFANTTYYGVNAFYFTNA 165 (295)
T ss_pred eEeEecCcccccCCHHHHHHHHHhhCcCcCCCCCHHHHHHHHhhCHHHHHHHHHHcCCCCCCCcccCCccceeeEEEECC
Confidence 9999999999999999999999987632 135666777554433322 25899999999999999999999
Q ss_pred CCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCCCcc
Q 037878 1858 DGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIPQDE 1937 (2280)
Q Consensus 1858 ~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~d~~ 1937 (2280)
+|+.+||||+++|.+|+.+++.+++ +.+++|||++||.+||+++ +++|+|+||+++++|
T Consensus 166 ~G~~~~vk~~~~P~~g~~~l~~~~~------------------~~~~~d~l~~~l~~~l~~g-~~~f~l~vQl~~~~d-- 224 (295)
T cd08153 166 NGKRQPVRWRFVPEDGVKYLSDEEA------------------AKLGPDFLFDELAQRLAQG-PVRWDLVLQLAEPGD-- 224 (295)
T ss_pred CCCEEEEEEEEEECCCCCCCCHHHh------------------ccCCcchhHHHHHHHHHhC-CceEEEEEEEcCCCC--
Confidence 9999999999999877766654432 3347899999999999997 599999999998877
Q ss_pred ccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHHhhhH
Q 037878 1938 AMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEICQH 2015 (2280)
Q Consensus 1938 ~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~s~~ 2015 (2280)
+++|+|++|||+ +|+++||+|+|+++.++ ++||+++|||||+++||++++ |||+|+|+.+|.+|++
T Consensus 225 ----~i~D~t~~Wpe~-~p~~~vg~l~l~~~~~~~~~~~e~l~F~P~~~~~gi~~~~-------Dpi~~~R~~aY~~s~~ 292 (295)
T cd08153 225 ----PTDDPTKPWPAD-RKEVDAGTLTITKVAPDQGGACRDINFDPLVLPDGIEPSD-------DPLLAARSAAYAVSFS 292 (295)
T ss_pred ----cCCCCCccCCCC-CceeEEEEEEECCCCccchhhhhheeeCCccCCCCCCCCC-------ChHHhhhhhHHHHHHh
Confidence 566999999999 89999999999988444 689999999999999999999 9999999999999999
Q ss_pred hhc
Q 037878 2016 LRN 2018 (2280)
Q Consensus 2016 ~R~ 2018 (2280)
+|.
T Consensus 293 ~R~ 295 (295)
T cd08153 293 RRQ 295 (295)
T ss_pred hcC
Confidence 995
No 92
>PRK06087 short chain acyl-CoA synthetase; Reviewed
Probab=100.00 E-value=2.1e-50 Score=544.57 Aligned_cols=499 Identities=23% Similarity=0.331 Sum_probs=375.7
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++.++. +|+++|+... ++ +++||+||+++++++|+.|++. |+++||+|+++++|++++++++|
T Consensus 23 ~~l~~~~~~~~~~--~pd~~a~~~~--~~---~~~Ty~~l~~~v~~la~~l~~~---G~~~gd~V~i~~~n~~~~~~~~l 92 (547)
T PRK06087 23 ASLADYWQQTARA--MPDKIAVVDN--HG---ASYTYSALDHAASRLANWLLAK---GIEPGDRVAFQLPGWCEFTIIYL 92 (547)
T ss_pred CCHHHHHHHHHHH--CCCceEEEcC--CC---CEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHH
Confidence 4688899888876 4889988642 33 4799999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch-----hhcc--CCCCCCC-ccccccccc----
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS-----AVRV--GSWPNLP-WLHTDSWVK---- 616 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~-----~~~~--~~~~~~~-~~~~~~~~~---- 616 (2280)
||+++|++++|+++..+.++ +..++++++++.++++..... .+.. ...+... .+..+....
T Consensus 93 A~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (547)
T PRK06087 93 ACLKVGAVSVPLLPSWREAE-------LVWVLNKCQAKMFFAPTLFKQTRPVDLILPLQNQLPQLQQIVGVDKLAPATSS 165 (547)
T ss_pred HHHHcCcEEeccchhcCHHH-------HHHHHHhcCCeEEEEecccccccHHHHHHHHHhhCCCCcEEEEeCCcCCCcCc
Confidence 99999999999999998877 889999999999998753211 0000 0001000 000000000
Q ss_pred -ccccccc--ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH
Q 037878 617 -NSKNLLA--ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 617 -~~~~~~~--~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
....... ..........++|+++|+|||||||.||||++||+++..........+++.+++++++++|++|.++++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~ 245 (547)
T PRK06087 166 LSLSQIIADYEPLTTAITTHGDELAAVLFTSGTEGLPKGVMLTHNNILASERAYCARLNLTWQDVFMMPAPLGHATGFLH 245 (547)
T ss_pred cCHHHHhccCCcccCCCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeEEEecchHHHHHHHH
Confidence 0000000 0001122346789999999999999999999999999888888888888899999999999999999888
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
.++.++..|+++++.+. .++..+++.++++++|++..+|..+..++...... ..+++++|.+++||+++++
T Consensus 246 ~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~-----~~~~~~lr~i~~gG~~~~~ 316 (547)
T PRK06087 246 GVTAPFLIGARSVLLDI----FTPDACLALLEQQRCTCMLGATPFIYDLLNLLEKQ-----PADLSALRFFLCGGTTIPK 316 (547)
T ss_pred HHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCCEEeccHHHHHHHHhccccC-----CCCCCCeEEEEEcCCCCCH
Confidence 89999999999988753 37899999999999999876655554444432221 2467899999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCC
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPG 853 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G 853 (2280)
++.+.+.+. ++++++.||+||++..++....... ....+++|.|++++.++++|+++ ..++.|
T Consensus 317 ~~~~~~~~~-------~~~l~~~YG~TE~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~i~d~~~--~~~~~g 379 (547)
T PRK06087 317 KVARECQQR-------GIKLLSVYGSTESSPHAVVNLDDPL--------SRFMHTDGYAAAGVEIKVVDEAR--KTLPPG 379 (547)
T ss_pred HHHHHHHHc-------CCcEEEEecccccCCccccCCCcch--------hhcCCcCCccCCCceEEEEcCCC--CCCcCC
Confidence 998887652 5679999999999876543321110 11235689999999999999765 345799
Q ss_pred CeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHH
Q 037878 854 KEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTV 932 (2280)
Q Consensus 854 ~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L 932 (2280)
+.|||+++|+.++.||+++++.+.+.|.. ++||+|||+++++ +|.++++||.||+||++|++|+|.|||++|
T Consensus 380 ~~Gel~v~g~~~~~gy~~~~~~~~~~~~~-------~g~~~TGDl~~~~~~g~l~i~GR~~d~i~~~G~~v~p~~iE~~l 452 (547)
T PRK06087 380 CEGEEASRGPNVFMGYLDEPELTARALDE-------EGWYYSGDLCRMDEAGYIKITGRKKDIIVRGGENISSREVEDIL 452 (547)
T ss_pred CcceEEEecccccccccCCHHHHHHHhCC-------CCCcCcCceEEECCCCCEEEEecchhhhhcCCEEECHHHHHHHH
Confidence 99999999999999999999999888753 4899999999997 999999999999999999999999999999
Q ss_pred HhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCC
Q 037878 933 ESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRT 1012 (2280)
Q Consensus 933 ~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~ 1012 (2280)
.++|+|.+ ++|++.+++..+ ....+++............++.+.+++. .++..+.|..+..+++
T Consensus 453 ~~~~~v~~---~~v~~~~~~~~g----------~~~~~~v~~~~~~~~~~~~~~~~~~~~~---~l~~~~~P~~i~~v~~ 516 (547)
T PRK06087 453 LQHPKIHD---ACVVAMPDERLG----------ERSCAYVVLKAPHHSLTLEEVVAFFSRK---RVAKYKYPEHIVVIDK 516 (547)
T ss_pred HhCCCeeE---EEEEecCCCCcC----------ceEEEEEEECCCCCCCCHHHHHHHHHhc---cccccCCCeEEEEecc
Confidence 99999875 888887765332 2222222221111112223444444332 2223334455555699
Q ss_pred ccCCCCcccchHHHHHHhhcC
Q 037878 1013 MSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1013 lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
||+|.|||++|++|++++.+.
T Consensus 517 iP~t~sGK~~r~~l~~~~~~~ 537 (547)
T PRK06087 517 LPRTASGKIQKFLLRKDIMRR 537 (547)
T ss_pred CCCCCCCcCcHHHHHHHHHHH
Confidence 999999999999998886543
No 93
>PRK07786 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.2e-50 Score=543.08 Aligned_cols=500 Identities=20% Similarity=0.301 Sum_probs=383.4
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.++.++... |+++|+.+.+ +.+||.||.++++++|+.|.+. |+++||+|+++++|++++++++
T Consensus 16 ~~n~~~~~~~~a~~~--~~~~a~~~~~------~~~ty~~l~~~~~~~a~~L~~~---g~~~g~~V~i~~~~~~~~~~~~ 84 (542)
T PRK07786 16 RQNWVNQLARHALMQ--PDAPALRFLG------NTTTWRELDDRVAALAGALSRR---GVGFGDRVLILMLNRTEFVESV 84 (542)
T ss_pred ccCHHHHHHHHHHHC--CCCeEEEeCC------CcccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHH
Confidence 456888888888764 8999987543 4799999999999999999988 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCc-ccccccc-c---cccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPW-LHTDSWV-K---NSKN 620 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~-~~~~~~~-~---~~~~ 620 (2280)
+||+++|++++|+++..+.++ +..++++++++.++++.......... ..+.... +...+.. . ...+
T Consensus 85 ~a~~~~G~~~vpl~~~~~~~~-------~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (542)
T PRK07786 85 LAANMLGAIAVPVNFRLTPPE-------IAFLVSDCGAHVVVTEAALAPVATAVRDIVPLLSTVVVAGGSSDDSVLGYED 157 (542)
T ss_pred HHHHHcCeEEEEcCccCCHHH-------HHHHHHhCCCcEEEEccchHHHHHHhhhccCccceEEEecCCCcccccCHHH
Confidence 999999999999999988877 88999999999999986543322110 0011110 0000000 0 0000
Q ss_pred c--ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCC-CCCcEEEEEcCchhhhhHHHHHHH
Q 037878 621 L--LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKS-TSKTVLVSWLPQYHDMGLIGGLFT 697 (2280)
Q Consensus 621 ~--~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~-~~~d~~l~~~pl~h~~gl~~~i~~ 697 (2280)
. .............+++++++|||||||.||||+++|+++...+......++. ..++++++.+|++|.+++ ..++.
T Consensus 158 ~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~-~~~~~ 236 (542)
T PRK07786 158 LLAEAGPAHAPVDIPNDSPALIMYTSGTTGRPKGAVLTHANLTGQAMTCLRTNGADINSDVGFVGVPLFHIAGI-GSMLP 236 (542)
T ss_pred HhhccCCCCCCCCCCCCCeEEEEeCCCCCccchhhhhhHHHHHHHHHHHHHhcCCCCCCceEEEecchHHHHHH-HHHHH
Confidence 0 0001111223456789999999999999999999999999888877777776 678899999999999887 57888
Q ss_pred HHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHH
Q 037878 698 AMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVK 777 (2280)
Q Consensus 698 ~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~ 777 (2280)
++..|+++++.+...+ +|..+++.++++++|++.++|+++..+........ .+ .++|.+++||+++++++.+
T Consensus 237 ~l~~G~~~v~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~~-----~~-~~lr~i~~gg~~~~~~~~~ 308 (542)
T PRK07786 237 GLLLGAPTVIYPLGAF--DPGQLLDVLEAEKVTGIFLVPAQWQAVCAEQQARP-----RD-LALRVLSWGAAPASDTLLR 308 (542)
T ss_pred HHHccCEEEEccCCCc--CHHHHHHHHHHcCCeEEEehHHHHHHHHhCcccCc-----cC-cceEEEEECCCCCCHHHHH
Confidence 9999999998754433 89999999999999999999999988876433221 22 3699999999999999999
Q ss_pred HHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeE
Q 037878 778 RFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGE 857 (2280)
Q Consensus 778 ~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GE 857 (2280)
++.+.+ ++..+++.||+||++.+++....... ....+++|+|+|++.++|+|+++ ..++.|+.||
T Consensus 309 ~~~~~~-----~~~~l~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~i~d~~~--~~~~~g~~Ge 373 (542)
T PRK07786 309 QMAATF-----PEAQILAAFGQTEMSPVTCMLLGEDA--------IRKLGSVGKVIPTVAARVVDENM--NDVPVGEVGE 373 (542)
T ss_pred HHHHHc-----CCCeEEeeecccccccceEecCcccc--------cccCCCccccCCCceEEEECCCC--CCCcCCCceE
Confidence 999875 46789999999999876553321111 11236789999999999999765 3457899999
Q ss_pred EEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhcc
Q 037878 858 VWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESST 936 (2280)
Q Consensus 858 L~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p 936 (2280)
|+++|+.+++||+++|+.|++.|. ++||+|||+++++ ||.++++||.||+||++|++|+|.|||++|.++|
T Consensus 374 l~v~g~~~~~gy~~~~~~~~~~f~--------~~~~~TGDl~~~~~~g~~~i~GR~~d~i~~~G~~v~~~eiE~~l~~~~ 445 (542)
T PRK07786 374 IVYRAPTLMSGYWNNPEATAEAFA--------GGWFHSGDLVRQDEEGYVWVVDRKKDMIISGGENIYCAEVENVLASHP 445 (542)
T ss_pred EEEEChhhhhhhcCCHHHHHHHhh--------CCcccccceEEEcCCceEEEEecccceEEeCCEEECHHHHHHHHHhCC
Confidence 999999999999999999999885 3799999999996 9999999999999999999999999999999999
Q ss_pred CCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCC
Q 037878 937 EHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKT 1016 (2280)
Q Consensus 937 ~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t 1016 (2280)
+|.+ |+|++.+++..+ .....+++...........++.+.+++++.. ++ .|..++.+++||+|
T Consensus 446 ~v~~---~~v~~~~~~~~~----------~~~~~~v~~~~~~~~~~~~~l~~~l~~~l~~-~~---~P~~i~~v~~iP~t 508 (542)
T PRK07786 446 DIVE---VAVIGRADEKWG----------EVPVAVAAVRNDDAALTLEDLAEFLTDRLAR-YK---HPKALEIVDALPRN 508 (542)
T ss_pred CccE---EEEEeccCcccC----------ceEEEEEEECCCCCCCCHHHHHHHHHhhccC-CC---CCCEEEEeccCCCC
Confidence 9865 888887654321 2222222221111111224555555555543 33 44445556999999
Q ss_pred CCcccchHHHHHHhhcCC
Q 037878 1017 TSGKIKRFECLKQFVDGT 1034 (2280)
Q Consensus 1017 ~sGKvdR~~L~~~~~~~~ 1034 (2280)
++||++|++|++++.+..
T Consensus 509 ~~GKv~r~~L~~~~~~~~ 526 (542)
T PRK07786 509 PAGKVLKTELRERYGACV 526 (542)
T ss_pred CcccccHHHHHHHHHhhh
Confidence 999999999999987654
No 94
>PRK10946 entE enterobactin synthase subunit E; Provisional
Probab=100.00 E-value=2.5e-50 Score=541.32 Aligned_cols=492 Identities=18% Similarity=0.242 Sum_probs=374.2
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.++++.+++ |+++|++..+ +.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++|
T Consensus 25 ~~~~~~~~~~a~----p~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~---g~~~g~~V~v~~~n~~~~~~~~l 91 (536)
T PRK10946 25 LPLTDILTRHAA----SDAIAVICGE------RQFSYRELNQASDNLACSLRRQ---GIKPGDTALVQLGNVAEFYITFF 91 (536)
T ss_pred ccHHHHHHHhhC----CCCeEEEeCC------CcccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCChHHHHHHHH
Confidence 368889988775 7899987532 5799999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccc--------hhhccCCCCCCCccccccc--cccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYH--------SAVRVGSWPNLPWLHTDSW--VKNS 618 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~--------~~~~~~~~~~~~~~~~~~~--~~~~ 618 (2280)
||+++|++++++++..+..+ +..++++++++.++++.... ..+.. ..+....+..... ....
T Consensus 92 a~~~~G~v~v~~~~~~~~~~-------~~~~~~~~~~~~li~~~~~~~~~~~~~~~~l~~-~~~~~~~~~~~~~~~~~~~ 163 (536)
T PRK10946 92 ALLKLGVAPVNALFSHQRSE-------LNAYASQIEPALLIADRQHALFSDDDFLNTLVA-EHSSLRVVLLLNDDGEHSL 163 (536)
T ss_pred HHHHcCeEEecCCccccHHH-------HHHHHhhcCCCEEEEeccccccchHHHHHHHHh-hCCCceEEEEecCCCCccH
Confidence 99999997776655544444 67888999999999875321 11110 0011111110000 0000
Q ss_pred ccc--ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH-HH
Q 037878 619 KNL--LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG-GL 695 (2280)
Q Consensus 619 ~~~--~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~-~i 695 (2280)
... ............++++++|+|||||||.||||++||+++...+......+++.+++++++.+|++|.+++.. .+
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~~~~~ 243 (536)
T PRK10946 164 DDAINHPAEDFTATPSPADEVAFFQLSGGSTGTPKLIPRTHNDYYYSVRRSVEICGFTPQTRYLCALPAAHNYPMSSPGA 243 (536)
T ss_pred HHHhhCcccccccCCCCCCCeEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCceEEEecCccccccchhhhH
Confidence 000 000111123446789999999999999999999999999999998888899999999999999999888653 57
Q ss_pred HHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHH
Q 037878 696 FTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTT 775 (2280)
Q Consensus 696 ~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l 775 (2280)
+.++..|+++++.+. .++..+++.++++++|++..+|.++..+++...... ...+++++|.+++||+++++++
T Consensus 244 ~~~l~~g~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~---~~~~~~~l~~v~~gg~~l~~~~ 316 (536)
T PRK10946 244 LGVFLAGGTVVLAPD----PSATLCFPLIEKHQVNVTALVPPAVSLWLQAIAEGG---SRAQLASLKLLQVGGARLSETL 316 (536)
T ss_pred HHHhhcCcEEEECCC----CCHHHHHHHHHHhCCcEEEeChHHHHHHHhhhcccC---ccccccceeEEEECCCCCCHHH
Confidence 888999999887643 278889999999999999999999988876542221 1245789999999999999999
Q ss_pred HHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCC-CCceEEEEcCCCCcccCCCCC
Q 037878 776 VKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQND-PDVDIRIVNPETSEEIGEPGK 854 (2280)
Q Consensus 776 ~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~-pg~~v~Ivd~~~~~~~~p~G~ 854 (2280)
.++|.+.+ ++++++.||+||+++..+... .+ .....+++|+|+ |+.+++|+|+++ +.++.|+
T Consensus 317 ~~~~~~~~------g~~~~~~YG~tE~~~~~~~~~---~~------~~~~~~~~G~p~~~~~~v~i~d~~~--~~~~~g~ 379 (536)
T PRK10946 317 ARRIPAEL------GCQLQQVFGMAEGLVNYTRLD---DS------DERIFTTQGRPMSPDDEVWVADADG--NPLPQGE 379 (536)
T ss_pred HHHHHHhc------CCeEEEeecccccceeeecCC---Cc------cccccccCCcccCCCceEEEECCCC--CCCCCCC
Confidence 99998764 568999999999764433211 11 012246789998 899999999765 4457999
Q ss_pred eeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHH
Q 037878 855 EGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVE 933 (2280)
Q Consensus 855 ~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~ 933 (2280)
.|||+++|+.++.||+++|+.|++.|.. ++||+|||+|+++ ||.++++||.||+||++|++|+|.|||++|.
T Consensus 380 ~Gel~v~g~~~~~GY~~~~~~t~~~~~~-------d~~~~TGDl~~~d~~G~l~~~gR~~d~i~~~G~~v~~~eiE~~l~ 452 (536)
T PRK10946 380 VGRLMTRGPYTFRGYYKSPQHNASAFDA-------NGFYCSGDLVSIDPDGYITVVGREKDQINRGGEKIAAEEIENLLL 452 (536)
T ss_pred ccEEEEecCccchhhcCCcccchhhccc-------CCceecCceEEECCCCcEEEeccccceeecCCEEEcHHHHHHHHH
Confidence 9999999999999999999999998864 4899999999997 9999999999999999999999999999999
Q ss_pred hccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHH-HHHhcCcceeEEEEecCCC
Q 037878 934 SSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTR-VVEEHGVTVASVKLIKPRT 1012 (2280)
Q Consensus 934 ~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~-l~~~~~~~~~~~~lv~~~~ 1012 (2280)
++|+|.+ ++|++.+++..+ ...+++++ ..++ ....++.+.+++. ++. ++.| ..+..+++
T Consensus 453 ~~~~v~~---~~v~~~~~~~~g---------~~~~a~vv---~~~~-~~~~~l~~~~~~~~l~~-~~~P---~~~~~~~~ 512 (536)
T PRK10946 453 RHPAVIH---AALVSMEDELMG---------EKSCAFLV---VKEP-LKAVQLRRFLREQGIAE-FKLP---DRVECVDS 512 (536)
T ss_pred hCCCcce---EEEEcCCCcccC---------ceEEEEEE---eCCC-CCHHHHHHHHHhCCccc-cccC---cEEEEecc
Confidence 9999975 888887765332 11222222 2222 3335566666554 443 4444 44455599
Q ss_pred ccCCCCcccchHHHHHHhhc
Q 037878 1013 MSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1013 lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+|+|++||++|++|++++.+
T Consensus 513 iP~t~~GKv~r~~L~~~~~~ 532 (536)
T PRK10946 513 LPLTAVGKVDKKQLRQWLAS 532 (536)
T ss_pred CCCCCCCcccHHHHHHHHHh
Confidence 99999999999999887644
No 95
>KOG1256 consensus Long-chain acyl-CoA synthetases (AMP-forming) [Lipid transport and metabolism]
Probab=100.00 E-value=7.5e-51 Score=507.82 Aligned_cols=437 Identities=19% Similarity=0.243 Sum_probs=339.6
Q ss_pred CCCCCHHHHHHhhccccccCCceEEEEEcC--CCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhH
Q 037878 466 PELSSLDGYLKHWGTHRITQKKTLFTWINE--EGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDF 543 (2280)
Q Consensus 466 ~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~--~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~ 543 (2280)
.+..|+.+.+++.+... ++.+++-+... ....++.+||.|..+++.+++..|+.. |+++++.|||+.-|++||
T Consensus 72 ~~~~T~~~~f~~~~~~~--~~~p~LG~r~~~~~~~~~~~~tY~q~~e~~~~~~~~l~~l---G~~~~~~VGIy~~N~pEW 146 (691)
T KOG1256|consen 72 DGPLTLYEGFRRSVEKS--GNGPMLGTRVIVDGKGPYEWLTYKQVYERAENLGSGLRKL---GVKEDSKVGIYAFNRPEW 146 (691)
T ss_pred CCcccHHHHhhcchhcc--CCCCceeEEecccCCCCcEEEEHHHHHHHHHHHHHHHHHh---CCCCCceEEEeccCChhh
Confidence 45678999998888774 67777776642 334578999999999999999999988 899999999999999999
Q ss_pred HHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccc-cchhhccCC----CCCCCcc-cccccc--
Q 037878 544 VDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIG-YHSAVRVGS----WPNLPWL-HTDSWV-- 615 (2280)
Q Consensus 544 ~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~-~~~~~~~~~----~~~~~~~-~~~~~~-- 615 (2280)
+++.+||..+|++.|||-...+.+. +.+|++++.+.+++++.+ ....+.... .+.+..+ .++...
T Consensus 147 iis~~a~~~~~~v~VplYdTlg~ea-------~~~Ii~~~e~~iv~vd~~~k~~~ll~~~~~~~~~~LK~iI~~~~~~~~ 219 (691)
T KOG1256|consen 147 IISEMACYAYSLVNVPLYDTLGAEA-------VHYIINHAEISIVFVDNAKKAEKLLEIKENDSLPSLKAIIQLDEPSDE 219 (691)
T ss_pred HHhHHHHHhcCCEEeecccCCCHHH-------HHHHHHhcceeEEEEeCHHHHHHHHhhcccccCccceeEEEecCCchh
Confidence 9999999999999999999998888 889999999999999843 222221110 1111110 011000
Q ss_pred ---------------cccccccccccccc-CCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH------cCC
Q 037878 616 ---------------KNSKNLLAENVVCF-TESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR------YKS 673 (2280)
Q Consensus 616 ---------------~~~~~~~~~~~~~~-~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~------~~~ 673 (2280)
.+..+........+ .++.|+|.|.|+|||||||+|||||+||+|+++.+...... ...
T Consensus 220 ~~~~~~~~gv~v~S~~e~~~lG~~~~~~~~~~p~p~d~atI~yTSGTTG~PKGVMLTH~Niv~~v~~~~~~~~~~~~~~~ 299 (691)
T KOG1256|consen 220 LKEKAENNGVEVYSWDEFEELGKKNQRKPRVPPKPDDLATICYTSGTTGNPKGVMLTHRNIVSDVAGIFFLSAAENAKAT 299 (691)
T ss_pred hhhhhhcCCeEEEEHHHHHhhcccccCCCCCCCCccceEEEEEcCCCCCCCceEEEeccceeehhhhhhhhhhccccccc
Confidence 00011111122223 47899999999999999999999999999999866532111 122
Q ss_pred CCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccc
Q 037878 674 TSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKV 753 (2280)
Q Consensus 674 ~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~ 753 (2280)
..+|++++++|++|++..+.+.+.. ..|+.+.++.+ |+..+.+.+++.++|.+.++|.+++.+.+.+.......
T Consensus 300 ~~~dv~lSyLPLAHi~er~~~~~~~-~~G~~IgF~~g-----D~~~l~~dlk~lkPT~f~~VPRVl~riye~I~~~~~~s 373 (691)
T KOG1256|consen 300 VGDDVYLSYLPLAHIFERVVELYTF-YIGAKIGFARG-----DILKLTDDLKELKPTVFPGVPRVLERIYEGIQKQVQKS 373 (691)
T ss_pred ccCceEEEeCcHHHHHHHHHHHhHh-hcccEEEEecC-----ChHHHHHHHHHhCCcEEeccHhHHHHHHHHHHHHHhcc
Confidence 3479999999999999998777665 66777776654 88889999999999999999999988765443221100
Q ss_pred ------------------------cc-cC-C--------------CCccEEEEecCCCCHHHHHHHHHHhcCCCCCCccc
Q 037878 754 ------------------------RS-FD-L--------------SSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVM 793 (2280)
Q Consensus 754 ------------------------~~-~~-l--------------~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v 793 (2280)
.. .+ + +++|.+++|++|+++++...++.. .++++
T Consensus 374 gflkr~l~~~A~~~k~~~~~~~G~~~~~~~~~D~lVf~KI~~~LGg~vr~~~sGaAPls~ev~~F~r~~------~g~~v 447 (691)
T KOG1256|consen 374 GFLKRKLFNFAMAYKLEHRLMKGKSRSRDRFADKLVFHKIKQSLGGNVRLIISGAAPLSPEVLTFFRAA------LGCRV 447 (691)
T ss_pred hHHHHHHHHHHHHHHHHHHhhCCCCcccchHHHHHHHHHHHHHhcCceeEEEecCCCCCHHHHHHHHHh------cCcee
Confidence 00 00 0 589999999999999988888765 37899
Q ss_pred ccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEc-CCCCcccCCCCCeeEEEEcCCCcccccCCC
Q 037878 794 APGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVN-PETSEEIGEPGKEGEVWISSPSAGIGYWGR 872 (2280)
Q Consensus 794 ~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd-~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~ 872 (2280)
.++||+|||+..++.....+ ...|++|.|+|+++++++| ||.+. . +.|..|||||+|++|+.|||+|
T Consensus 448 ~eGYGlTEts~g~~~~~~~d----------~~lgsvG~p~p~~~vKL~dvpe~ny-~-a~~~~GEIcirG~~Vf~GYyK~ 515 (691)
T KOG1256|consen 448 LEGYGLTETSAGTTLTLPGD----------NVLGSVGPPVPGNEVKLVDVPEMNY-D-ADGSKGEICVRGPNVFMGYYKD 515 (691)
T ss_pred eecccccccCCceEeccCCC----------CCCCCcCCcccCceEEEechHHhCc-C-cCCCcceEEEecchhceeccCC
Confidence 99999999996655543322 2468999999999999999 44432 2 4677899999999999999999
Q ss_pred chhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCcCCceeEEEe
Q 037878 873 EELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHIRPGCCAVIG 948 (2280)
Q Consensus 873 p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~ 948 (2280)
|++|+++|+. +||+||||+|+++ +|.|.++||+|+++|+ .|++|.|..||++..+.+-|.+ .+|.+
T Consensus 516 p~~T~e~ide-------DGWLhTGDiG~~~p~G~l~IidRkK~ifklaqGEyVaPe~IEniy~~~~~V~q---i~V~g 583 (691)
T KOG1256|consen 516 PEKTAEAIDE-------DGWLHTGDIGEWDPNGTLKIIDRKKNIFKLAQGEYVAPEKIENIYKRSLPVQQ---IFVLG 583 (691)
T ss_pred hHHHhhhhcc-------ccccccccceeECCCccEEEEecccceEEcCCCCccChHHHHHHHhcCCceEE---EEEEC
Confidence 9999999975 5999999999997 9999999999999999 7999999999999998776653 55655
No 96
>PRK13390 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=1.8e-50 Score=539.36 Aligned_cols=480 Identities=18% Similarity=0.218 Sum_probs=352.3
Q ss_pred cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCC
Q 037878 484 TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPP 563 (2280)
Q Consensus 484 ~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~ 563 (2280)
.|+++|+.+.+ ++ +++||+||.++++++|+.|.++ |+++||+|+++++|++++++++|||+++|++++|+++.
T Consensus 10 ~p~~~a~~~~~-~~---~~lTy~el~~~~~~la~~L~~~---gv~~gd~V~i~~~n~~~~~~~~la~~~~Ga~~~~l~~~ 82 (501)
T PRK13390 10 APDRPAVIVAE-TG---EQVSYRQLDDDSAALARVLYDA---GLRTGDVVALLSDNSPEALVVLWAALRSGLYITAINHH 82 (501)
T ss_pred CCCCcEEEecC-CC---eEeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEeccccC
Confidence 48899987642 22 5799999999999999999998 99999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCc-cccccccc---cccccccccccccCCCCCCCeEE
Q 037878 564 DPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPW-LHTDSWVK---NSKNLLAENVVCFTESQPDDLCF 639 (2280)
Q Consensus 564 ~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~d~a~ 639 (2280)
.+.++ +.+++++++++.++++........... ..... +....... ......... .......++.++
T Consensus 83 ~~~~~-------~~~~~~~~~~~~~i~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~a~ 152 (501)
T PRK13390 83 LTAPE-------ADYIVGDSGARVLVASAALDGLAAKVG-ADLPLRLSFGGEIDGFGSFEAALAGA--GPRLTEQPCGAV 152 (501)
T ss_pred CCHHH-------HHHHHHhcCCcEEEEcchhhhHHHHhh-hccceEEEecCcccccccHHHHhccc--CCCCCCCcccEE
Confidence 99888 889999999999998764322111100 00000 00000000 000000000 001112235799
Q ss_pred EEeccCCCCCceEEEE--chHHHHHHH----HHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCcccc
Q 037878 640 LQFTSGSTGDAKGVMI--THGGLIHNV----KLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTF 713 (2280)
Q Consensus 640 IiyTSGSTG~PKgV~~--tH~~l~~~~----~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~ 713 (2280)
|+|||||||.||||++ +|+++.... ......+.+..+++++.++|++|++++... +..+..|+++++.+.
T Consensus 153 i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~h~~~~~~~-~~~~~~g~~~~~~~~--- 228 (501)
T PRK13390 153 MLYSSGTTGFPKGIQPDLPGRDVDAPGDPIVAIARAFYDISESDIYYSSAPIYHAAPLRWC-SMVHALGGTVVLAKR--- 228 (501)
T ss_pred EEeCCCCCCCCCEEEeeccccccccchhhhHhhHHHHhCCCCCCeEEecccchhhhHHHHH-HHHHhcCceEEEcCC---
Confidence 9999999999999995 566654422 222345678899999999999999987543 445678888887653
Q ss_pred ccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCccc
Q 037878 714 IKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVM 793 (2280)
Q Consensus 714 ~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v 793 (2280)
.++..+++.++++++|++..+|+++..+.+..... ....+++++|.+++||+++++++.+.+.+.+ +..+
T Consensus 229 -~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~---~~~~~~~~l~~v~~~g~~~~~~~~~~~~~~~------~~~~ 298 (501)
T PRK13390 229 -FDAQATLGHVERYRITVTQMVPTMFVRLLKLDADV---RTRYDVSSLRAVIHAAAPCPVDVKHAMIDWL------GPIV 298 (501)
T ss_pred -cCHHHHHHHHHHcCCeEEEecHHHHHHHHhccchh---cccCChhhhheEEEcCCCCCHHHHHHHHHhc------CCce
Confidence 27899999999999999999999988776432111 1224578999999999999999999988764 4569
Q ss_pred ccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCc
Q 037878 794 APGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGRE 873 (2280)
Q Consensus 794 ~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p 873 (2280)
++.||+||++.++...... . ....+++|+|+++ .++|+|+++ .++++|+.|||+|+|++++.||+++|
T Consensus 299 ~~~YG~tE~~~~~~~~~~~-~--------~~~~~~~G~~~~g-~~~i~d~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~ 366 (501)
T PRK13390 299 YEYYSSTEAHGMTFIDSPD-W--------LAHPGSVGRSVLG-DLHICDDDG--NELPAGRIGTVYFERDRLPFRYLNDP 366 (501)
T ss_pred eeeecccccCceEEecchh-h--------ccCCCCcCCcccc-eEEEECCCC--CCCCCCCceEEEEecCCccccccCCh
Confidence 9999999998654332110 0 1123678999999 799999765 45589999999999999999999999
Q ss_pred hhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEecccc
Q 037878 874 ELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEE 952 (2280)
Q Consensus 874 ~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~ 952 (2280)
+.|+++|.. .+++||+|||+|+++ ||.++|.||.||+||++|+||+|.|||++|.++|+|.+ ++|++++++
T Consensus 367 ~~t~~~~~~-----~~~~w~~tGDl~~~~~dg~l~~~gR~~~~i~~~G~~v~p~eIE~~l~~~~~v~~---~~v~~~~~~ 438 (501)
T PRK13390 367 EKTAAAQHP-----AHPFWTTVGDLGSVDEDGYLYLADRKSFMIISGGVNIYPQETENALTMHPAVHD---VAVIGVPDP 438 (501)
T ss_pred hhhHHhhcc-----CCCceEEcCceEEECCCCeEEEeeccccceeECCeeeCHHHHHHHHHhCCCeeE---EEEEeccCc
Confidence 999998853 234799999999996 99999999999999999999999999999999999865 889988775
Q ss_pred ccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHH
Q 037878 953 VLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFEC 1026 (2280)
Q Consensus 953 ~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L 1026 (2280)
..+ +....++.. ..+.....++.+.+++.+..+++..+.|..++.+++||+|++||++|++|
T Consensus 439 ~~~----------e~~~~~v~~--~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~~~~~~~iP~t~~GKi~r~~L 500 (501)
T PRK13390 439 EMG----------EQVKAVIQL--VEGIRGSDELARELIDYTRSRIAHYKAPRSVEFVDELPRTPTGKLVKGLL 500 (501)
T ss_pred ccC----------ceeEEEEEe--cCCCCcchhhHHHHHHHHHHhcccCCCCcEEEEeccCCCCCccceehhhc
Confidence 432 222223222 22222222223334444444334444555566669999999999999875
No 97
>PRK07008 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-50 Score=539.80 Aligned_cols=506 Identities=18% Similarity=0.249 Sum_probs=373.0
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
++.+++++++.+. +++.++.+. .++. .+.+||.||.++++++|+.|.+. |+++||+|+++++|+++++++++|
T Consensus 11 ~~~~~l~~~~~~~--~~~~~~~~~-~~~~-~~~~Ty~el~~~~~~~a~~L~~~---g~~~~d~v~i~~~~~~~~~~~~la 83 (539)
T PRK07008 11 LISSLIAHAARHA--GDTEIVSRR-VEGD-IHRYTYRDCERRAKQLAQALAAL---GVEPGDRVGTLAWNGYRHLEAYYG 83 (539)
T ss_pred CHHHHHHHHHhhC--CCceEEEee-ccCc-ceEeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCcHHHHHHHHH
Confidence 6788999988874 667666542 1222 35799999999999999999998 999999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCc-ccccc----------ccc
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPW-LHTDS----------WVK 616 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~-~~~~~----------~~~ 616 (2280)
|+++|++++|+++..+.++ +..+++.+++++++++.+....+... ..+.... +...+ ...
T Consensus 84 ~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (539)
T PRK07008 84 VSGSGAVCHTINPRLFPEQ-------IAYIVNHAEDRYVLFDLTFLPLVDALAPQCPNVKGWVAMTDAAHLPAGSTPLLC 156 (539)
T ss_pred HHhcCcEEeecccccCHHH-------HHHHHhccCCcEEEEcchhHHHHHHHHhhCCCceEEEEEccCCccccCCccccc
Confidence 9999999999999998887 88999999999999886543322110 0011000 00000 000
Q ss_pred ccc-ccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHH--HHHHHcCCCCCcEEEEEcCchhhhhHHH
Q 037878 617 NSK-NLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVK--LMRKRYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 617 ~~~-~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~--~~~~~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
... ..............++++++++|||||||.||||++||++++.+.. .....++...+|+++.++|++|.+++ .
T Consensus 157 ~~~l~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~-~ 235 (539)
T PRK07008 157 YETLVGAQDGDYDWPRFDENQASSLCYTSGTTGNPKGALYSHRSTVLHAYGAALPDAMGLSARDAVLPVVPMFHVNAW-G 235 (539)
T ss_pred HHHHhcccCCCcCcccCCcccceEEEECCCCCCCCcEEEEecHHHHHHHHHhhcccccCCCCCceEEecCchHHhhhH-H
Confidence 000 0000011112234678899999999999999999999999865432 22345778889999999999998775 4
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
.++.++..|+++++.++ . .++..+++.++++++|++.++|+++..+.+..... ..+++++|.+++||+++++
T Consensus 236 ~~~~~l~~G~~~~~~~~-~--~~~~~~~~~l~~~~vt~~~~~P~~~~~l~~~~~~~-----~~~~~~l~~~~~~G~~l~~ 307 (539)
T PRK07008 236 LPYSAPLTGAKLVLPGP-D--LDGKSLYELIEAERVTFSAGVPTVWLGLLNHMREA-----GLRFSTLRRTVIGGSACPP 307 (539)
T ss_pred HHHHHHhcCceEEEecC-C--cCHHHHHHHHHHcCCEEEEechHHHHHHHhccccc-----CCCcccceEEEEcCCCCCH
Confidence 45778889999888654 2 38899999999999999999999998887654332 2467899999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCC-ceeeccccCCCCCceEEEEcCCCCcccCCC
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQG-RVCCGYVDQNDPDVDIRIVNPETSEEIGEP 852 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g-~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~ 852 (2280)
++.++|.+.+ ++.+++.||+||++..++............... ....+++|+|+|+++++|+|+++. .+...
T Consensus 308 ~~~~~~~~~~------~~~l~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~pg~~~~i~d~~~~-~~~~~ 380 (539)
T PRK07008 308 AMIRTFEDEY------GVEVIHAWGMTEMSPLGTLCKLKWKHSQLPLDEQRKLLEKQGRVIYGVDMKIVGDDGR-ELPWD 380 (539)
T ss_pred HHHHHHHHHh------CCceecccccccccccceecccccccccCCchhhhhhcccCCccccceEEEEECCCCC-ccCCC
Confidence 9999998764 467999999999986554322110000000000 012357899999999999997653 33222
Q ss_pred -CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHH
Q 037878 853 -GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEK 930 (2280)
Q Consensus 853 -G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~ 930 (2280)
++.|||+++|+.++.||+++|+ +.|. ++||+|||+++++ ||.++++||+||+||++|++|+|.|||+
T Consensus 381 ~~~~Gei~v~g~~~~~gy~~~~~---~~~~--------~g~~~TGD~~~~~~dg~l~~~GR~~d~i~~~G~~v~p~eIE~ 449 (539)
T PRK07008 381 GKAFGDLQVRGPWVIDRYFRGDA---SPLV--------DGWFPTGDVATIDADGFMQITDRSKDVIKSGGEWISSIDIEN 449 (539)
T ss_pred CCcceEEEEeCCccchhhcCChh---hhhc--------CCCcccCceEEEcCCCcEEEeecccCEEEeCCeEEcHHHHHH
Confidence 3579999999999999999983 2332 3799999999997 9999999999999999999999999999
Q ss_pred HHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEec
Q 037878 931 TVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIK 1009 (2280)
Q Consensus 931 ~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~ 1009 (2280)
+|.++|.|.+ ++|++++++..+ +...++++. .++.. ..+++.+++++++.. ++.| ..++.
T Consensus 450 ~l~~~p~v~~---~~v~~~~~~~~~----------~~~~~~v~~--~~~~~~~~~~l~~~~~~~l~~-~~~P---~~i~~ 510 (539)
T PRK07008 450 VAVAHPAVAE---AACIACAHPKWD----------ERPLLVVVK--RPGAEVTREELLAFYEGKVAK-WWIP---DDVVF 510 (539)
T ss_pred HHHhCCceeE---EEEEecCCchhc----------cceEEEEEe--CCCCccCHHHHHHHHHhhccc-ccCC---eEEEE
Confidence 9999999975 888888765322 222222222 22222 235677777777664 4444 44555
Q ss_pred CCCccCCCCcccchHHHHHHhhcCCC
Q 037878 1010 PRTMSKTTSGKIKRFECLKQFVDGTL 1035 (2280)
Q Consensus 1010 ~~~lP~t~sGKvdR~~L~~~~~~~~~ 1035 (2280)
+++||+|.+||++|++|++++.+..+
T Consensus 511 v~~lP~t~sgKi~r~~l~~~~~~~~~ 536 (539)
T PRK07008 511 VDAIPHTATGKLQKLKLREQFRDYVL 536 (539)
T ss_pred ecCCCCCCccceeHHHHHHHHHhhcc
Confidence 69999999999999999998876543
No 98
>PRK08008 caiC putative crotonobetaine/carnitine-CoA ligase; Validated
Probab=100.00 E-value=4.1e-50 Score=538.36 Aligned_cols=494 Identities=18% Similarity=0.222 Sum_probs=375.4
Q ss_pred CCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 467 ELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 467 ~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
...++.+++++++++ +|+++|+.+.+.++ ..+.+||+||.++++++|+.|.++ |+++||+|+++++|+.+++++
T Consensus 5 ~~~~l~~~~~~~a~~--~p~~~a~~~~~~~~-~~~~~ty~~l~~~v~~la~~L~~~---g~~~~~~v~i~~~n~~~~~~~ 78 (517)
T PRK08008 5 GGQHLRQMWDDLADV--YGHKTALIFESSGG-VVRRYSYLELNEEINRTANLFYSL---GIRKGDKVALHLDNCPEFIFC 78 (517)
T ss_pred ccccHHHHHHHHHHH--CCCceEEEcccCCC-ccceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHH
Confidence 345789999999877 48999998765332 247899999999999999999988 899999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC---CCCCCCcccc--------cccc
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG---SWPNLPWLHT--------DSWV 615 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~---~~~~~~~~~~--------~~~~ 615 (2280)
+|||+++|++++|+++..+.++ +..++++++++.++++.......... .......+.. ....
T Consensus 79 ~la~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (517)
T PRK08008 79 WFGLAKIGAIMVPINARLLREE-------SAWILQNSQASLLVTSAQFYPMYRQIQQEDATPLRHICLTRVALPADDGVS 151 (517)
T ss_pred HHHHHHcCeEEEEcCcccCHHH-------HHHHHHhcCceEEEEecchhHHHHHHHhhccccCcEEEEecCCCccccccc
Confidence 9999999999999999999887 88999999999999987644322110 0000000000 0000
Q ss_pred c--cccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH
Q 037878 616 K--NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 616 ~--~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
. .................++++++|+|||||||.||||++||+|+............+..++++++++|++|..+...
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~ 231 (517)
T PRK08008 152 SFTQLKAQQPATLCYAPPLSTDDTAEILFTSGTTSRPKGVVITHYNLRFAGYYSAWQCALRDDDVYLTVMPAFHIDCQCT 231 (517)
T ss_pred CHHHHhccCCccccccCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHhhhcCCCCCCeEEEecCcHHHHHHHH
Confidence 0 00000000011122345689999999999999999999999999865544444456788999999999999988888
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
.++.++..|+++++.+. .++..+++.++++++|++..+|.+++.+....... .....++|.+.++ .++++
T Consensus 232 ~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-----~~~~~~l~~~~~~-~~~~~ 301 (517)
T PRK08008 232 AAMAAFSAGATFVLLEK----YSARAFWGQVCKYRATITECIPMMIRTLMVQPPSA-----NDRQHCLREVMFY-LNLSD 301 (517)
T ss_pred HHHHHHhcCcEEEEccc----cCHHHHHHHHHHcCCcEEechHHHHHHHHhCCCcc-----ccccccceeeEEe-cCCCH
Confidence 88999999999988753 27899999999999999999999988776432111 1224567877775 48899
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCC
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPG 853 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G 853 (2280)
+...+|.+.+ ++++++.||+||++..++...... ....+++|.|+++++++|+|+++ ..++.|
T Consensus 302 ~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~G~~~~g~~~~i~d~~~--~~~~~g 364 (517)
T PRK08008 302 QEKDAFEERF------GVRLLTSYGMTETIVGIIGDRPGD---------KRRWPSIGRPGFCYEAEIRDDHN--RPLPAG 364 (517)
T ss_pred HHHHHHHHHh------CCeEEeeccccccccccccCCccc---------cccCCccccCCCCcEEEEECCCC--CCCCCC
Confidence 9898888864 578999999999986554322111 11246789999999999999765 345789
Q ss_pred CeeEEEEcC---CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHH
Q 037878 854 KEGEVWISS---PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVE 929 (2280)
Q Consensus 854 ~~GEL~i~G---p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE 929 (2280)
+.|||+++| +++++||+++|+.|++.|.. ++||+|||+++++ ||.++|+||+||+||++|+||+|.|||
T Consensus 365 ~~Gel~v~g~~~~~~~~gy~~~~~~~~~~~~~-------~g~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~i~p~~iE 437 (517)
T PRK08008 365 EIGEICIKGVPGKTIFKEYYLDPKATAKVLEA-------DGWLHTGDTGYVDEEGFFYFVDRRCNMIKRGGENVSCVELE 437 (517)
T ss_pred CcceEEEeCCCCcchhhhHhCChHHHhhcccC-------CCCeeccceEEECCCCcEEEeecccceEEeCCEEECHHHHH
Confidence 999999998 68999999999999998864 4799999999997 999999999999999999999999999
Q ss_pred HHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcceeEEEEe
Q 037878 930 KTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTVASVKLI 1008 (2280)
Q Consensus 930 ~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~lv 1008 (2280)
+++.+++.|.+ ++|++++++..+ ..+.+++.. ..+... ..+++++++++++. +++| ..++
T Consensus 438 ~~l~~~~~v~~---~~v~g~~~~~~~----------~~~~~~v~~--~~~~~~~~~~l~~~~~~~l~~-~~~P---~~~~ 498 (517)
T PRK08008 438 NIIATHPKIQD---IVVVGIKDSIRD----------EAIKAFVVL--NEGETLSEEEFFAFCEQNMAK-FKVP---SYLE 498 (517)
T ss_pred HHHHhCCceee---EEEEccCCCCCC----------ceEEEEEEE--CCCCCCCHHHHHHHHHhhccc-ccCC---cEEE
Confidence 99999999865 889988765321 223333322 333222 25666777766654 4444 4455
Q ss_pred cCCCccCCCCcccchHHH
Q 037878 1009 KPRTMSKTTSGKIKRFEC 1026 (2280)
Q Consensus 1009 ~~~~lP~t~sGKvdR~~L 1026 (2280)
.++++|+|++||++|+.|
T Consensus 499 ~v~~iP~t~~gK~~r~~l 516 (517)
T PRK08008 499 IRKDLPRNCSGKIIKKNL 516 (517)
T ss_pred EeccCCCCCccceehhhc
Confidence 568999999999999864
No 99
>PRK06164 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.4e-49 Score=535.98 Aligned_cols=497 Identities=20% Similarity=0.256 Sum_probs=376.7
Q ss_pred CCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhH
Q 037878 464 EFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDF 543 (2280)
Q Consensus 464 ~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~ 543 (2280)
+.+...++.++++..+++. |+++|+.. ++ +++||+||.++++++|+.|.+. |+++||+|+++++|+.++
T Consensus 5 ~~~~~~~l~~~l~~~a~~~--p~~~a~~~--~~----~~~Ty~~L~~~~~~~a~~L~~~---g~~~g~~V~i~~~n~~~~ 73 (540)
T PRK06164 5 AAPRADTLASLLDAHARAR--PDAVALID--ED----RPLSRAELRALVDRLAAWLAAQ---GVRRGDRVAVWLPNCIEW 73 (540)
T ss_pred cccCCCCHHHHHHHHHHhC--CCCeEEec--CC----CcccHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCcHHH
Confidence 3556678999999888774 88999872 11 5899999999999999999988 899999999999999999
Q ss_pred HHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch-----hhccCC---CCCCCcc-ccccc
Q 037878 544 VDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS-----AVRVGS---WPNLPWL-HTDSW 614 (2280)
Q Consensus 544 ~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~-----~~~~~~---~~~~~~~-~~~~~ 614 (2280)
+++++||+++|++++|+++..+.++ +.++++++++++++++.+... .+.... .+....+ ..+..
T Consensus 74 ~~~~la~~~~G~~~v~l~~~~~~~~-------l~~~i~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (540)
T PRK06164 74 VVLFLACARLGATVIAVNTRYRSHE-------VAHILGRGRARWLVVWPGFKGIDFAAILAAVPPDALPPLRAIAVVDDA 146 (540)
T ss_pred HHHHHHHHHhCcEEEecCCCCCcHH-------HHHHHHhcCccEEEEccccccccHHHHhhcccccccCCcceEEEeccC
Confidence 9999999999999999999998887 889999999999998765321 000000 0011100 00000
Q ss_pred ccccc--------ccc--c--c--cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEE
Q 037878 615 VKNSK--------NLL--A--E--NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLV 680 (2280)
Q Consensus 615 ~~~~~--------~~~--~--~--~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l 680 (2280)
..... ... . . .........++++++++|||||||+||||+++|+++.+.+......+++..+++++
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~pK~v~~s~~~l~~~~~~~~~~~~~~~~~~~l 226 (540)
T PRK06164 147 ADATPAPAPGARVQLFALPDPAPPAAAGERAADPDAGALLFTTSGTTSGPKLVLHRQATLLRHARAIARAYGYDPGAVLL 226 (540)
T ss_pred cccCCCCCcccccccccccccCCcccccccCCCCCceEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEE
Confidence 00000 000 0 0 00001123468999999999999999999999999999999888899999999999
Q ss_pred EEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCC
Q 037878 681 SWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSS 760 (2280)
Q Consensus 681 ~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~ 760 (2280)
+++|++|.+++. .++.++..|+++++.+. .++..+++.++++++|++..+|.++..+.+.. . ...++++
T Consensus 227 ~~~p~~~~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~p~~l~~l~~~~-~-----~~~~~~~ 295 (540)
T PRK06164 227 AALPFCGVFGFS-TLLGALAGGAPLVCEPV----FDAARTARALRRHRVTHTFGNDEMLRRILDTA-G-----ERADFPS 295 (540)
T ss_pred EcCCchhHHHHH-HHHHHHhcCceEEecCC----CCHHHHHHHHHHhCCeeecCCHHHHHHHHHhh-c-----ccCCCcc
Confidence 999999999984 68899999999988653 37899999999999999999999998887651 1 1256889
Q ss_pred ccEEEEec-CCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCC-CCceE
Q 037878 761 MKFLMVAA-EPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQND-PDVDI 838 (2280)
Q Consensus 761 Lr~l~~gG-e~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~-pg~~v 838 (2280)
+|.+..+| .+...++.+++.+. ++++++.||+||++.+++....... .......+|.|. +++++
T Consensus 296 l~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~YG~tE~~~~~~~~~~~~~-------~~~~~~~~g~~~~~~~~~ 361 (540)
T PRK06164 296 ARLFGFASFAPALGELAALARAR-------GVPLTGLYGSSEVQALVALQPATDP-------VSVRIEGGGRPASPEARV 361 (540)
T ss_pred eeeeeeccCCcchHHHHHHHhhc-------CCceecceeeccccceeeccCCCCC-------CcceeccCccccCCCeEE
Confidence 99887776 45555555554432 5679999999999876654322111 012234456665 89999
Q ss_pred EEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEE
Q 037878 839 RIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLII 917 (2280)
Q Consensus 839 ~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IK 917 (2280)
+|+|++++. .++.|+.|||||+|++++.||+++|+.|++.|.. ++||+|||+|+++ ||.++|.||.||+||
T Consensus 362 ~i~d~~~~~-~~~~g~~Gel~v~g~~~~~gY~~~~~~t~~~~~~-------~~~~~TGDl~~~~~~g~l~~~GR~~~~i~ 433 (540)
T PRK06164 362 RARDPQDGA-LLPDGESGEIEIRAPSLMRGYLDNPDATARALTD-------DGYFRTGDLGYTRGDGQFVYQTRMGDSLR 433 (540)
T ss_pred EEecCCCCc-CCCCCCeeEEEEecccccccccCCchhhhhcccC-------CCceecCCeEEEcCCceEEEEeecCCeEE
Confidence 999987654 4579999999999999999999999999998864 4899999999997 999999999999999
Q ss_pred ECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHH
Q 037878 918 VAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVE 996 (2280)
Q Consensus 918 i~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~ 996 (2280)
++|++|+|.|||++|.++++|.+ ++|+++++. + ......++ ...++. ...+++.+.+++++++
T Consensus 434 ~~G~~i~p~eIE~~l~~~~~v~~---~~v~~~~~~----------~-~~~~~~~v--v~~~~~~~~~~~l~~~~~~~l~~ 497 (540)
T PRK06164 434 LGGFLVNPAEIEHALEALPGVAA---AQVVGATRD----------G-KTVPVAFV--IPTDGASPDEAGLMAACREALAG 497 (540)
T ss_pred ECCEEcCHHHHHHHHHhCCCcee---EEEEecCCC----------C-ceeEEEEE--EeCCCCCCCHHHHHHHHHhhccc
Confidence 99999999999999999999875 777776531 1 11222222 222222 2235677777777664
Q ss_pred hcCcceeEEEEecCCCccCCCCc---ccchHHHHHHhh
Q 037878 997 EHGVTVASVKLIKPRTMSKTTSG---KIKRFECLKQFV 1031 (2280)
Q Consensus 997 ~~~~~~~~~~lv~~~~lP~t~sG---KvdR~~L~~~~~ 1031 (2280)
+++|. .++.++++|+|++| |++|++|++++.
T Consensus 498 -~~~P~---~i~~~~~~P~t~~g~~~Ki~r~~L~~~~~ 531 (540)
T PRK06164 498 -FKVPA---RVQVVEAFPVTESANGAKIQKHRLREMAQ 531 (540)
T ss_pred -CcCCc---EEEEecCCCCCCCCccccccHHHHHHHHH
Confidence 44453 34555999999999 999999988754
No 100
>KOG1175 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.4e-50 Score=505.94 Aligned_cols=501 Identities=21% Similarity=0.257 Sum_probs=398.7
Q ss_pred cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCC
Q 037878 484 TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPP 563 (2280)
Q Consensus 484 ~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~ 563 (2280)
-++.+++.+.+.++.....+||.||.+++.++|..|... |+++||+|++++|+.+|+++++|||.++|++..++...
T Consensus 78 ~~~~~a~~~~~~~~~~~~~~t~~el~~~v~~~a~~l~~~---g~~kGD~V~~~mPm~~e~~ia~lA~~r~Gai~~~v~~~ 154 (626)
T KOG1175|consen 78 GGDKVAIIFEGNEGGDTEVWTYKELLDQVVRLANVLRKC---GLKKGDTVAIYMPMIPEAVIAMLACARIGAIHSSVFAG 154 (626)
T ss_pred CCCCcEEEEEecCCCceEEEEHHHHHHHHHHHHHHHHhc---CCCCCcEEEEeccCChHHHHHHHHHhhcCeEEEEeecc
Confidence 368888888866655545599999999999999999976 99999999999999999999999999999999999988
Q ss_pred CccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC-----------CCCCC--Cccc---cc----ccccccccccc
Q 037878 564 DPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG-----------SWPNL--PWLH---TD----SWVKNSKNLLA 623 (2280)
Q Consensus 564 ~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~-----------~~~~~--~~~~---~~----~~~~~~~~~~~ 623 (2280)
.+... +..-+++++++++++.+......+.. ..+.. .... .. +..........
T Consensus 155 fs~~~-------l~~Rl~~~~~k~i~t~d~~~~~~k~i~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~a 227 (626)
T KOG1175|consen 155 FSAKE-------LLDRLQDSKAKVIITQDVVARGGKSINLKCIVLEALLLVSDKSRPVWLDLIVSRRNRDLFWSLELKKA 227 (626)
T ss_pred CCHHH-------HHHHHHhcCCCEEEEEeeeccCCCccchhhhHHHHhhcccccccccceeeEEecccccccHHHHhhhc
Confidence 88776 77888999999999986543321111 00000 0000 00 00000000111
Q ss_pred ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHH-HHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHcc
Q 037878 624 ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGG-LIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGG 702 (2280)
Q Consensus 624 ~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~-l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G 702 (2280)
....+....+.+|+.+|+|||||||.|||+.+++.+ ++..+......++..++|++++...+.++++-+..++.+|++|
T Consensus 228 ~~~~~~~~~~~edpl~IlfTSGtTg~PK~v~ht~~g~ll~~~~~~~~~~d~q~~dv~~~~~d~GWi~g~~~~~~gpl~~G 307 (626)
T KOG1175|consen 228 SPEHPCVPVKAEDPLFILFTSGTTGKPKGVIHTTGGYLLGAALTSRYHFDLQPSDVLWCASDLGWITGHSYVLYGPLLNG 307 (626)
T ss_pred CCCCCceecCccCceEEEecCCCCCCCCceeeccCcchHHHhhhcceeccCCCcceEEEecccCeeeccchhhhhhhhcC
Confidence 122235567789999999999999999999999888 5566666677789999999999999999999988889999999
Q ss_pred ceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHH
Q 037878 703 STAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVEL 782 (2280)
Q Consensus 703 ~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~ 782 (2280)
+++++++...+ +|..+++.++++++|++.+.|++++.+.+...... ..+++++||.+.+.|||+.++..++|.+.
T Consensus 308 a~~vl~~g~p~--~~~~~~~~v~k~~it~l~t~pt~~r~l~~~~~~~~---~~~~~~sLk~~~S~Gepi~~~~~ew~~~~ 382 (626)
T KOG1175|consen 308 ATVVLYEGPPF--DPGRIWKILDKYKVTVLYTAPTAYRLLRRLGQEDV---TSYSLKSLRTCGSVGEPINPEAWEWWKRV 382 (626)
T ss_pred cEEEEEcCCCC--ChhhhhhhHhhcceEEEEeccHHHHHHHHhccccc---cccccceEEEEeecCccCCcchHHHHHHh
Confidence 99999988776 99999999999999999999999998765433322 23555789999999999999999999988
Q ss_pred hcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcC
Q 037878 783 TRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISS 862 (2280)
Q Consensus 783 ~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~G 862 (2280)
++ . ..|.+.||.||++..+........ ...+|+.+.|.+|+.+.|+|+++. .+.+.++.|||++..
T Consensus 383 ~~---~--~pv~e~~~qtEtG~~~i~~~~g~~--------p~~pg~~~~p~~g~~v~i~de~g~-~~~~~~~~G~l~~~~ 448 (626)
T KOG1175|consen 383 TG---L--DPIYETYGQTETGGICITPKPGKL--------PIKPGSAGKPFPGYDVQILDENGN-ELPPSTGNGELRLKP 448 (626)
T ss_pred cC---c--cchhhceeeeccCceeeeccCCCC--------CcCccccCCCCCCcceEEECCCCC-CcCCCCceeEEEEeC
Confidence 63 1 269999999999987765432221 234688999999999999999653 443333899999987
Q ss_pred C---CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCC
Q 037878 863 P---SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 863 p---~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
+ +.+++||||++.-..++.. +-.|+|.|||.+++| ||+++++||.||+|+++|+|+.+.|||+++.+||.|
T Consensus 449 ~~P~~~~r~~~~n~erf~~~yf~-----k~pg~y~tGD~~~rd~dGY~~i~GR~DDviNvsGhRigtaEIE~al~~hp~V 523 (626)
T KOG1175|consen 449 PWPPGMFRTLWGNHERFRAAYFK-----KFPGYYFTGDGGRRDEDGYYWILGRVDDVINVSGHRIGTAEIESALVEHPAV 523 (626)
T ss_pred CCCccccccccCCHHHhhhhhcc-----cCCceEEecCceEEcCCceEEEEecccccccccceeecHHHHHHHHhhCcch
Confidence 3 7899999999844444332 234899999999998 999999999999999999999999999999999999
Q ss_pred cCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCC
Q 037878 939 IRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTS 1018 (2280)
Q Consensus 939 ~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~s 1018 (2280)
.+ +|||+.+++..++ ++++++.+.++....++|.++|+.+++........|..++.++.||+|.|
T Consensus 524 aE---sAvVg~p~~~~ge------------~v~aFvvl~~g~~~~~~L~kel~~~VR~~igp~a~P~~I~~v~~LPkTrS 588 (626)
T KOG1175|consen 524 AE---SAVVGSPDPIKGE------------VVLAFVVLKSGSHDPEQLTKELVKHVRSVIGPYAVPRLIVFVPGLPKTRS 588 (626)
T ss_pred hh---eeeecCCCCCCCe------------EEEEEEEEcCCCCChHHHHHHHHHHHHhhcCcccccceeEecCCCCcccc
Confidence 86 9999999986432 23333445667777789999999999988877788888888899999999
Q ss_pred cccchHHHHHHhhcC
Q 037878 1019 GKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1019 GKvdR~~L~~~~~~~ 1033 (2280)
||+-|+.|++....+
T Consensus 589 GKimRr~lrki~~g~ 603 (626)
T KOG1175|consen 589 GKIMRRALRKIASGK 603 (626)
T ss_pred chhHHHHHHHHhccC
Confidence 999999999886544
No 101
>PRK04813 D-alanine--poly(phosphoribitol) ligase subunit 1; Provisional
Probab=100.00 E-value=1.3e-49 Score=532.22 Aligned_cols=500 Identities=19% Similarity=0.252 Sum_probs=385.5
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
+++.++|++++.+ .|+++++...+ +.+||+||.++++++|..|.++ |+++||+|+++++|+.+++++++
T Consensus 2 ~~~~~~l~~~a~~--~p~~~~~~~~~------~~~t~~~l~~~~~~~a~~l~~~---g~~~~~~v~~~~~~~~~~~~~~~ 70 (503)
T PRK04813 2 MDIIETIEEFAQT--QPDFPAYDYLG------EKLTYGQLKEDSDALAAFIDSL---KLPDKSPIIVFGHMSPEMLATFL 70 (503)
T ss_pred chHHHHHHHHHHh--CCCceEEEeCC------cEEeHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCCHHHHHHHH
Confidence 3567888888876 48898876432 4799999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+++|++++|+++.++.++ +..+++.+++++++++....... .....+..++...... .......
T Consensus 71 a~~~~G~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~--~~~~~~~ 136 (503)
T PRK04813 71 GAVKAGHAYIPVDVSSPAER-------IEMIIEVAKPSLIIATEELPLEI-----LGIPVITLDELKDIFA--TGNPYDF 136 (503)
T ss_pred HHHHcCCEEecCCCCChHHH-------HHHHHHhcCCCEEEecccccccc-----cCCcEEehHHhhhhhh--ccccccc
Confidence 99999999999999998887 88899999999999976542110 1111111111111000 0001111
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++++++++|||||||.||||.++|+++...+.+....+....+++++.+.|++|+.++ ..++.++..|+++++.
T Consensus 137 ~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~v~~ 215 (503)
T PRK04813 137 DHAVKGDDNYYIIFTSGTTGKPKGVQISHDNLVSFTNWMLEDFALPEGPQFLNQAPYSFDLSV-MDLYPTLASGGTLVAL 215 (503)
T ss_pred cccCCCCCcEEEEECCCCCCCCcEEEeehHHHHHHHHHHHHHcCCCcCceeeecCCcchhHhH-HHHHHHHhcCCEEEEc
Confidence 223467899999999999999999999999999998888888899999999999999999987 5677899999999887
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
+. .+..++..+++.++++++|++..+|++++.+....... ..+++++|.++++|+++++++.+++.+.+
T Consensus 216 ~~-~~~~~~~~~~~~~~~~~~t~~~~~p~~~~~~~~~~~~~-----~~~~~~l~~i~~~G~~l~~~~~~~~~~~~----- 284 (503)
T PRK04813 216 PK-DMTANFKQLFETLPQLPINVWVSTPSFADMCLLDPSFN-----EEHLPNLTHFLFCGEELPHKTAKKLLERF----- 284 (503)
T ss_pred Ch-hhhcCHHHHHHHHHHcCCeEEEeChHHHHHHHHhhccC-----cccCCCceEEEEecCcCCHHHHHHHHHHC-----
Confidence 64 33458999999999999999999999887765432211 24678999999999999999999999875
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
+++.+++.||+||++..++........ .......++|.|.++++++|+|+++ ..++.|+.|||+++|++++.|
T Consensus 285 ~~~~~~~~yG~tE~~~~~~~~~~~~~~-----~~~~~~~~~g~~~~~~~~~i~d~~~--~~~~~g~~Gel~v~~~~~~~g 357 (503)
T PRK04813 285 PSATIYNTYGPTEATVAVTSIEITDEM-----LDQYKRLPIGYAKPDSPLLIIDEEG--TKLPDGEQGEIVISGPSVSKG 357 (503)
T ss_pred CCceEEeCcccchheeEEEEEEecccc-----cccCCCCcccccCCCCEEEEECCCC--CCCCCCCceEEEEeccccccc
Confidence 467899999999997654432211110 0112235689999999999999765 344789999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEe
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIG 948 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~ 948 (2280)
|+++++.|.+.|..+ .+.+||+|||++++.||.+++.||.||+||++|++|+|.|||+++.++|+|.+ ++|++
T Consensus 358 y~~~~~~~~~~~~~~----~g~~~~~tGD~~~~~~g~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~---~~v~~ 430 (503)
T PRK04813 358 YLNNPEKTAEAFFTF----DGQPAYHTGDAGYLEDGLLFYQGRIDFQIKLNGYRIELEEIEQNLRQSSYVES---AVVVP 430 (503)
T ss_pred cCCChhHhHHhhccC----CCceeEECCceEEeeCCeEEEeccccceEEECcEEeCHHHHHHHHHhCCCcce---EEEEE
Confidence 999999999888542 45679999999999999999999999999999999999999999999999865 77777
Q ss_pred ccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 949 VPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
.+++.. .+...+++. ..++. ....++.+.+++.+.+.++....|..++.++++|+|+|||++|++|+
T Consensus 431 ~~~~~~----------~~~~~~~v~--~~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~ 498 (503)
T PRK04813 431 YNKDHK----------VQYLIAYVV--PKEEDFEREFELTKAIKKELKERLMEYMIPRKFIYRDSLPLTPNGKIDRKALI 498 (503)
T ss_pred eeCCCC----------ccEEEEEEE--eccccccccchhHHHHHHHHHhhCccccCCeEEEEeccCCCCCCCCCcHHHHH
Confidence 544311 122222222 22221 11223444555555554444445556666799999999999999998
Q ss_pred HHhh
Q 037878 1028 KQFV 1031 (2280)
Q Consensus 1028 ~~~~ 1031 (2280)
+++.
T Consensus 499 ~~~~ 502 (503)
T PRK04813 499 EEVN 502 (503)
T ss_pred HHhc
Confidence 8764
No 102
>PRK06187 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.6e-49 Score=534.22 Aligned_cols=499 Identities=22% Similarity=0.346 Sum_probs=388.6
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++.++.. |+++|+.+.+ +.+||+||+++++++|+.|.+. |+++|++|+++++|+.++++++
T Consensus 5 ~~~l~~~l~~~~~~~--p~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~---g~~~~~~V~l~~~~~~~~~~~~ 73 (521)
T PRK06187 5 PLTIGRILRHGARKH--PDKEAVYFDG------RRTTYAELDERVNRLANALRAL---GVKKGDRVAVFDWNSHEYLEAY 73 (521)
T ss_pred cCCHHHHHHHHHHHC--CCceEEEeCC------ceEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHH
Confidence 457889998888874 7899987654 3599999999999999999988 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-cccccccc--------c
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTDSWV--------K 616 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~~~~--------~ 616 (2280)
|||+++|++++|+++..+.++ +..+++.++++.++++......+... ..+... .+..++.. .
T Consensus 74 la~~~~G~~~v~~~~~~~~~~-------~~~~i~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (521)
T PRK06187 74 FAVPKIGAVLHPINIRLKPEE-------IAYILNDAEDRVVLVDSEFVPLLAAILPQLPTVRTVIVEGDGPAAPLAPEVG 146 (521)
T ss_pred HHHHHcCeEEEecccCCCHHH-------HHHHHHhcCCeEEEEcchHHHHHHHHhhccCCccEEEEecCccccccccccc
Confidence 999999999999999998887 88999999999999987654332211 011110 00000000 0
Q ss_pred ccccccc--ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHH
Q 037878 617 NSKNLLA--ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 617 ~~~~~~~--~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
...+... ..........++++++++|||||||.||+|.+||+++.+........+++..++++++.+|++|..++...
T Consensus 147 ~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 226 (521)
T PRK06187 147 EYEELLAAASDTFDFPDIDENDAAAMLYTSGTTGHPKGVVLSHRNLFLHSLAVCAWLKLSRDDVYLVIVPMFHVHAWGLP 226 (521)
T ss_pred cHHHHhhcCCccCCCCCCCccceEEEEECCCCCCCCceEEeehHHHHHHHHHHHHhhCCCCCCEEEEeCCchHHhhHHHH
Confidence 0000000 01111234567899999999999999999999999999988888888999999999999999999988554
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHH
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQT 774 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~ 774 (2280)
+. ++..|+++++.+. + ++..+++.++++++|++.++|+++..+.+..... ..+++++|.+++|||+++++
T Consensus 227 ~~-~l~~G~~~v~~~~--~--~~~~~~~~l~~~~~t~l~~~p~~~~~l~~~~~~~-----~~~~~~l~~v~~~Ge~l~~~ 296 (521)
T PRK06187 227 YL-ALMAGAKQVIPRR--F--DPENLLDLIETERVTFFFAVPTIWQMLLKAPRAY-----FVDFSSLRLVIYGGAALPPA 296 (521)
T ss_pred HH-HHHhCCEEEecCC--C--CHHHHHHHHHHhCCeEEEchHHHHHHHHcCcCCC-----ccCcchhhEEEEcCcCCCHH
Confidence 44 8999999988764 2 8999999999999999999999999887654432 25678999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCC--
Q 037878 775 TVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEP-- 852 (2280)
Q Consensus 775 l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~-- 852 (2280)
+.+.|.+.+ +++++|.||+||++.+++......... . .....+++|.|+++++++|+|+++. .++.
T Consensus 297 ~~~~~~~~~------~~~v~~~YG~tE~~~~~~~~~~~~~~~--~--~~~~~~~~G~~~~~~~~~i~~~~~~--~~~~~~ 364 (521)
T PRK06187 297 LLREFKEKF------GIDLVQGYGMTETSPVVSVLPPEDQLP--G--QWTKRRSAGRPLPGVEARIVDDDGD--ELPPDG 364 (521)
T ss_pred HHHHHHHHh------CcchheeeccCccCcccccCCcccccc--c--ccccCCccccccCCeEEEEECCCCC--CCCCCC
Confidence 999999874 567999999999987655432211100 0 0113467899999999999998763 4467
Q ss_pred CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 853 GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 853 G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
|+.|||+++|+.++.||+++++.+.+.|.+ +||+|||+++++ ||.+++.||.||+||++|++|+|.|||++
T Consensus 365 g~~Gel~v~~~~~~~~y~~~~~~~~~~~~~--------~~~~tGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~IE~~ 436 (521)
T PRK06187 365 GEVGEIIVRGPWLMQGYWNRPEATAETIDG--------GWLHTGDVGYIDEDGYLYITDRIKDVIISGGENIYPRELEDA 436 (521)
T ss_pred CCeeEEEEECcchhhhhcCCHHHHHHHhhC--------CceeccceEEEcCCCCEEEeecccceEEcCCeEECHHHHHHH
Confidence 999999999999999999999999988853 599999999996 99999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecC
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKP 1010 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~ 1010 (2280)
|.++++|.+ ++|++.+++..+ +... ++++..++. ....++.+.+++++.. + ..|..++.+
T Consensus 437 l~~~~~v~~---~~v~~~~~~~~~----------~~~~--~~v~~~~~~~~~~~~l~~~l~~~l~~-~---~~p~~i~~v 497 (521)
T PRK06187 437 LYGHPAVAE---VAVIGVPDEKWG----------ERPV--AVVVLKPGATLDAKELRAFLRGRLAK-F---KLPKRIAFV 497 (521)
T ss_pred HHhCCCceE---EEEEeccCCCcC----------ceEE--EEEEECCCCCCCHHHHHHHHHHhccC-C---CCceEEEEc
Confidence 999999865 888876654321 2222 222233332 2234556666655543 3 344555666
Q ss_pred CCccCCCCcccchHHHHHHhhcC
Q 037878 1011 RTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1011 ~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
+++|+|++||++|++|+++|.++
T Consensus 498 ~~~P~t~~gK~~r~~l~~~~~~~ 520 (521)
T PRK06187 498 DELPRTSVGKILKRVLREQYAEG 520 (521)
T ss_pred cCCCCCCCCCeeHHHHHHHHhcC
Confidence 99999999999999999998765
No 103
>TIGR03098 ligase_PEP_1 acyl-CoA ligase (AMP-forming), exosortase system type 1 associated. This group of proteins contains an AMP-binding domain (pfam00501) associated with acyl CoA-ligases. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present next to a decarboxylase enzyme. A number of sequences from Burkholderia species also hit this model, but the genomic context is obviously different. The hypothesis of a constant substrate for this family is only strong where the exosortase context is present.
Probab=100.00 E-value=1.5e-49 Score=533.35 Aligned_cols=494 Identities=20% Similarity=0.253 Sum_probs=378.7
Q ss_pred HHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHH
Q 037878 471 LDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGC 550 (2280)
Q Consensus 471 l~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~ 550 (2280)
+.++++..+.+ +|+++|+.+.+ +.+||+||.++++++|+.|++. |+++||+|+++++|+.++++++|||
T Consensus 2 ~~~~~~~~~~~--~p~~~a~~~~~------~~~ty~~l~~~v~~~a~~l~~~---g~~~~~~V~i~~~n~~~~~~~~lA~ 70 (515)
T TIGR03098 2 LHHLLEDAAAR--LPDATALVHHD------RTLTYAALSERVLALASGLRGL---GLARGERVAIYLDKRLETVTAMFGA 70 (515)
T ss_pred HHHHHHHHHHH--CCCCeEEEECC------ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHHH
Confidence 56778887776 48899887643 4799999999999999999988 8999999999999999999999999
Q ss_pred HHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-ccccccccc---------cc
Q 037878 551 MRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTDSWVK---------NS 618 (2280)
Q Consensus 551 l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~~~~~---------~~ 618 (2280)
+++|++++|+++..+.++ +..+++++++++++++......+... ..+... .+...+... ..
T Consensus 71 ~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (515)
T TIGR03098 71 ALAGGVFVPINPLLKAEQ-------VAHILADCNVRLLVTSSERLDLLHPALPGCHDLRTLILVGEPAHASEGGGESPSW 143 (515)
T ss_pred HhcCEEEEeCCCCCCHHH-------HHHHHHcCCCeEEEEccchhhhhHhhhhcccccceEEEecCcccccCCccccccH
Confidence 999999999999998877 88999999999999976543322110 000000 000010000 00
Q ss_pred cccc-cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHH
Q 037878 619 KNLL-AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFT 697 (2280)
Q Consensus 619 ~~~~-~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~ 697 (2280)
.... ............+++++|+|||||||.||||++||+++...+......+.+..+|++++++|++|++++. .++.
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~ 222 (515)
T TIGR03098 144 PKLLALGDADPPHPVIDSDMAAILYTSGSTGRPKGVVLSHRNLVAGAQSVATYLENRPDDRLLAVLPLSFDYGFN-QLTT 222 (515)
T ss_pred HHhhccccccccCCCCcCCeEEEEECCCCCCCCceEEEecHHHHHHHHHHHHHhCCCcccEEEEECchhhHhHHH-HHHH
Confidence 0000 0000112233567999999999999999999999999999888888888889999999999999999974 6889
Q ss_pred HHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHH
Q 037878 698 AMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVK 777 (2280)
Q Consensus 698 ~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~ 777 (2280)
++..|+++++.+. .++..+.+.++++++|++.++|+++..+.+... ...+++++|.+++||+++++++.+
T Consensus 223 ~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~------~~~~~~~l~~~~~~g~~l~~~~~~ 292 (515)
T TIGR03098 223 AFYVGATVVLHDY----LLPRDVLKALEKHGITGLAAVPPLWAQLAQLDW------PESAAPSLRYLTNSGGAMPRATLS 292 (515)
T ss_pred HHHcCCEEEEcCC----CCHHHHHHHHHHcCCceEecChHHHHHHHhccc------CCCCccceEEEEecCCcCCHHHHH
Confidence 9999999988753 279999999999999999999999887764211 113578999999999999999999
Q ss_pred HHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeE
Q 037878 778 RFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGE 857 (2280)
Q Consensus 778 ~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GE 857 (2280)
++.+.+ ++..+++.||+||++..+...... . ....+++|+|+|+++++|+|+++ ..++.|+.||
T Consensus 293 ~~~~~~-----~~~~~~~~YG~tE~~~~~~~~~~~--~-------~~~~~~vG~~~~~~~~~i~~~~~--~~~~~~~~Ge 356 (515)
T TIGR03098 293 RLRSFL-----PNARLFLMYGLTEAFRSTYLPPEE--V-------DRRPDSIGKAIPNAEVLVLREDG--SECAPGEEGE 356 (515)
T ss_pred HHHHHC-----CCCeEeeeeccccccceEeccccc--c-------cCCCCCcceecCCCEEEEECCCC--CCCCCCCceE
Confidence 998875 467899999999987544332110 0 11246799999999999999764 3346899999
Q ss_pred EEEcCCCcccccCCCchhhHHHHhhhcc----CCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHH
Q 037878 858 VWISSPSAGIGYWGREELSQITFRNELQ----NNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTV 932 (2280)
Q Consensus 858 L~i~Gp~v~~GY~~~p~~t~~~f~~~~~----~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L 932 (2280)
|+++|+.++.||+++++.|++.|.+.+. ...+.+||+|||+|+++ ||.+++.||+||+||++|++|+|.|||++|
T Consensus 357 l~v~g~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~TGD~~~~~~~g~l~~~GR~~d~i~~~G~~v~~~eiE~~l 436 (515)
T TIGR03098 357 LVHRGALVAMGYWNDPEKTAERFRPLPPRPGELHLPELAVWSGDTVRRDEEGFLYFVGRRDEMIKTSGYRVSPTEVEEVA 436 (515)
T ss_pred EEEcCchhhccccCCchhhhhhhhccCCccccccccccceeccceEEEcCCceEEEEeccccceecCCEEeCHHHHHHHH
Confidence 9999999999999999999999875321 11235799999999996 999999999999999999999999999999
Q ss_pred HhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCC
Q 037878 933 ESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPR 1011 (2280)
Q Consensus 933 ~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~ 1011 (2280)
.++|.|.+ |+|++++++..+ +...+++. ...+. ....++.+.+++++.+ ++.| ..++.++
T Consensus 437 ~~~~~v~~---~~v~~~~~~~~g----------~~~~~~~~--~~~~~~~~~~~l~~~l~~~l~~-~~~p---~~i~~v~ 497 (515)
T TIGR03098 437 YATGLVAE---AVAFGVPDPTLG----------QAIVLVVT--PPGGEELDRAALLAECRARLPN-YMVP---ALIHVRQ 497 (515)
T ss_pred hcCCCeeE---EEEEeccCcccC----------ceEEEEEE--eCCCCCCCHHHHHHHHHhhCcc-ccCC---CEEEEec
Confidence 99999865 889988776432 22222222 12222 2224566666666654 3434 4455568
Q ss_pred CccCCCCcccchHHHHH
Q 037878 1012 TMSKTTSGKIKRFECLK 1028 (2280)
Q Consensus 1012 ~lP~t~sGKvdR~~L~~ 1028 (2280)
+||+|.+||++|++|++
T Consensus 498 ~iP~t~~GK~~r~~L~~ 514 (515)
T TIGR03098 498 ALPRNANGKIDRKALAA 514 (515)
T ss_pred cCCCCCCCCCcHHHhcc
Confidence 99999999999998753
No 104
>PRK07787 acyl-CoA synthetase; Validated
Probab=100.00 E-value=9.8e-50 Score=527.38 Aligned_cols=454 Identities=22% Similarity=0.329 Sum_probs=358.2
Q ss_pred cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCC
Q 037878 484 TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPP 563 (2280)
Q Consensus 484 ~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~ 563 (2280)
.++++|+...+ +++||+||.++++++|..|+ ++|+|+++++|+++++++++||+++|++++|+++.
T Consensus 13 ~~~~~a~~~~~------~~~Ty~el~~~~~~~a~~L~--------~~~~V~l~~~~~~~~~~~~la~~~~G~~~v~l~~~ 78 (471)
T PRK07787 13 ADIADAVRIGG------RVLSRSDLAGAATAVAERVA--------GARRVAVLATPTLATVLAVVGALIAGVPVVPVPPD 78 (471)
T ss_pred cCCceEEEeCC------cEEEHHHHHHHHHHHHHHhc--------cCCEEEEECCCCHHHHHHHHHHHhcCcEEeecCCC
Confidence 47889887632 58999999999999999984 35999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccCCCCCCCeEEEEec
Q 037878 564 DPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFT 643 (2280)
Q Consensus 564 ~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyT 643 (2280)
.+.++ +..++++++++.++++..... ...+...... .... ........++|+++|+||
T Consensus 79 ~~~~~-------l~~~l~~~~~~~il~~~~~~~-------~~~~~~~~~~---~~~~-----~~~~~~~~~~~~a~i~~T 136 (471)
T PRK07787 79 SGVAE-------RRHILADSGAQAWLGPAPDDP-------AGLPHVPVRL---HARS-----WHRYPEPDPDAPALIVYT 136 (471)
T ss_pred CChHH-------HHHHHHhcCCCEEEecCCccc-------ccccceeeec---cccc-----cccCCCCCCCceEEEEEC
Confidence 98887 889999999999999753110 0111111000 0000 001123467899999999
Q ss_pred cCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHH
Q 037878 644 SGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLET 723 (2280)
Q Consensus 644 SGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~ 723 (2280)
|||||.||||+++|+++..++......++..+++++++.+|++|.++++..++.++..|+++++.+. .++..+++.
T Consensus 137 SGTTG~PK~v~~t~~~l~~~~~~~~~~~~~~~~~~~~~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~ 212 (471)
T PRK07787 137 SGTTGPPKGVVLSRRAIAADLDALAEAWQWTADDVLVHGLPLFHVHGLVLGVLGPLRIGNRFVHTGR----PTPEAYAQA 212 (471)
T ss_pred CCCCCCCCEEEEeHHHHHHHHHHHHHhcCCCccceeEeccCCeeechhHHHHHHHHhcCCEEEecCC----CCHHHHHHH
Confidence 9999999999999999999998888888999999999999999999998899999999999987653 389999999
Q ss_pred HhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccc
Q 037878 724 MSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENC 803 (2280)
Q Consensus 724 i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~ 803 (2280)
++ +++|++..+|.++..+.+.... ..+++++|.+++||+++++++.++|.+.+ +..++|.||+||++
T Consensus 213 i~-~~~t~~~~~P~~~~~l~~~~~~------~~~l~~l~~~~~gg~~~~~~~~~~~~~~~------~~~~~~~YG~tE~~ 279 (471)
T PRK07787 213 LS-EGGTLYFGVPTVWSRIAADPEA------ARALRGARLLVSGSAALPVPVFDRLAALT------GHRPVERYGMTETL 279 (471)
T ss_pred Hh-hCceEEEcchHHHHHHHhCccc------cccccceeEEEECCCCCCHHHHHHHHHHc------CCCeecccCccccC
Confidence 99 9999999999998887653211 13578899999999999999999998764 46799999999998
Q ss_pred cceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCC-eeEEEEcCCCcccccCCCchhhHHHHhh
Q 037878 804 VFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGK-EGEVWISSPSAGIGYWGREELSQITFRN 882 (2280)
Q Consensus 804 ~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~-~GEL~i~Gp~v~~GY~~~p~~t~~~f~~ 882 (2280)
..++.... .....+++|+|+++++++|+|+++. .+.+.|+ +|||+++|++++.||+++|+.|++.|..
T Consensus 280 ~~~~~~~~----------~~~~~~~vG~~~~g~~~~i~d~~~~-~~~~~~~~~Gei~v~g~~~~~gy~~~~~~t~~~~~~ 348 (471)
T PRK07787 280 ITLSTRAD----------GERRPGWVGLPLAGVETRLVDEDGG-PVPHDGETVGELQVRGPTLFDGYLNRPDATAAAFTA 348 (471)
T ss_pred cceecCCC----------CcccCCcccccCCCcEEEEECCCCC-CCCCCCCCceEEEEECcccchhhcCChhhchhcccC
Confidence 65443211 0112467899999999999998753 3322454 8999999999999999999999988853
Q ss_pred hccCCCCCceeecCcEEEEE-CCeEEEEecC-CCeEEECCeeechHHHHHHHHhccCCcCCceeEEEecccccccccccc
Q 037878 883 ELQNNRGRKYTRTGDLGRII-DGKFFITGRI-KDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGIS 960 (2280)
Q Consensus 883 ~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~-dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~ 960 (2280)
++||+|||+|+++ ||.++++||+ |+++|++|+||+|.|||++|.+++.|.+ ++|++.+++..+
T Consensus 349 -------~~~~~TGDlg~~~~dg~l~~~GR~~d~~i~~~G~~v~~~eIE~~l~~~~~v~~---~~v~~~~~~~~~----- 413 (471)
T PRK07787 349 -------DGWFRTGDVAVVDPDGMHRIVGRESTDLIKSGGYRIGAGEIETALLGHPGVRE---AAVVGVPDDDLG----- 413 (471)
T ss_pred -------CCceecCceEEEcCCCCEEEeCCCCceeEeeCCEEECHHHHHHHHHhCCCcce---EEEEcccccccC-----
Confidence 4799999999997 9999999996 8999999999999999999999998865 888887664322
Q ss_pred ccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHH
Q 037878 961 VSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLK 1028 (2280)
Q Consensus 961 ~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~ 1028 (2280)
....++++ .. ......++.+.+++++.+ ++.| ..++.+++||+|.+||+||++|++
T Consensus 414 -----~~~~a~v~--~~-~~~~~~~l~~~l~~~l~~-~~~P---~~i~~~~~iP~~~~GKi~r~~L~~ 469 (471)
T PRK07787 414 -----QRIVAYVV--GA-DDVAADELIDFVAQQLSV-HKRP---REVRFVDALPRNAMGKVLKKQLLS 469 (471)
T ss_pred -----eEEEEEEE--eC-CCCCHHHHHHHHHhhccc-ccCC---cEEEEeccCCCCCCccccHHHhcc
Confidence 12222222 22 222335666777766664 3433 445556999999999999998754
No 105
>PRK06188 acyl-CoA synthetase; Validated
Probab=100.00 E-value=2.3e-49 Score=531.87 Aligned_cols=500 Identities=20% Similarity=0.265 Sum_probs=384.2
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++.+++++ +|+++|+.+.+ +.+||.||.++++++|+.|.+. |+++||+|+++++|++++++++
T Consensus 11 ~~~~~~~~~~~~~~--~~~~~a~~~~~------~~~Ty~~l~~~~~~~a~~L~~~---gv~~~~~V~i~~~~~~~~~~~~ 79 (524)
T PRK06188 11 GATYGHLLVSALKR--YPDRPALVLGD------TRLTYGQLADRISRYIQAFEAL---GLGTGDAVALLSLNRPEVLMAI 79 (524)
T ss_pred CccHHHHHHHHHHH--CCCCeEEEECC------CcccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHH
Confidence 45788999888876 48899987532 5799999999999999999988 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccc-cchhhcc--CCCCCCC-cccccccc--cccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIG-YHSAVRV--GSWPNLP-WLHTDSWV--KNSKNL 621 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~-~~~~~~~--~~~~~~~-~~~~~~~~--~~~~~~ 621 (2280)
+||+++|++++|+++..+.++ +..+++++++..++++.. ....... ...+... .+...... ......
T Consensus 80 la~~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 152 (524)
T PRK06188 80 GAAQLAGLRRTALHPLGSLDD-------HAYVLEDAGISTLIVDPAPFVERALALLARVPSLKHVLTLGPVPDGVDLLAA 152 (524)
T ss_pred HHHHHhCCEEEecccCCCHHH-------HHHHHHhcCceEEEEecchhhHHHHHHhhhcCCceEEEEeCCccchhhHHHh
Confidence 999999999999999988887 788999999999998765 2111110 0011111 11111000 000000
Q ss_pred c--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHH
Q 037878 622 L--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAM 699 (2280)
Q Consensus 622 ~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L 699 (2280)
. ...........++|+++|+|||||||.||+|+++|+++...+......+++..++++++.+|++|..++ .++.++
T Consensus 153 ~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~pk~v~~s~~~l~~~~~~~~~~~~~~~~~~~l~~~pl~~~~g~--~~~~~l 230 (524)
T PRK06188 153 AAKFGPAPLVAAALPPDIAGLAYTGGTTGKPKGVMGTHRSIATMAQIQLAEWEWPADPRFLMCTPLSHAGGA--FFLPTL 230 (524)
T ss_pred hhccCcccccccCCCCCeEEEEeCCCCCCCCceeeeehHHHHHHHHHHHhhcCCCcCcEEEEecCchhhhhH--HHHHHH
Confidence 0 000011122345679999999999999999999999999999988888999999999999999999886 367889
Q ss_pred HccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHH
Q 037878 700 VGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRF 779 (2280)
Q Consensus 700 ~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~ 779 (2280)
+.|+++++.++ .+|..+++.++++++|++.++|+++..+++..... ..+++++|.+++||++++++...++
T Consensus 231 ~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~l~~l~~~~~~~-----~~~l~~lr~~~~gg~~~~~~~~~~~ 301 (524)
T PRK06188 231 LRGGTVIVLAK----FDPAEVLRAIEEQRITATFLVPTMIYALLDHPDLR-----TRDLSSLETVYYGASPMSPVRLAEA 301 (524)
T ss_pred HcCCEEEEcCC----CCHHHHHHHHHHhCCEEEEehHHHHHHHHhCcCcc-----CCCCcceeEEEEcCCCCCHHHHHHH
Confidence 99999998764 37999999999999999999999998887543222 2468899999999999999999988
Q ss_pred HHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEE
Q 037878 780 VELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVW 859 (2280)
Q Consensus 780 ~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~ 859 (2280)
.+.+ +..+++.||+||++..++....... +.......+++|+|+|+++++|+|+++ ..++.|+.|||+
T Consensus 302 ~~~~------~~~~~~~YG~tE~~~~~~~~~~~~~----~~~~~~~~~~~G~p~~g~~v~i~~~~~--~~~~~g~~Gel~ 369 (524)
T PRK06188 302 IERF------GPIFAQYYGQTEAPMVITYLRKRDH----DPDDPKRLTSCGRPTPGLRVALLDEDG--REVAQGEVGEIC 369 (524)
T ss_pred HHHh------CchhhheeCccccCCceeecCchhc----cccccccCCccccccCCcEEEEEcCCC--CCCCCCCeeEEE
Confidence 8764 3569999999999765543321111 000112346789999999999999874 345799999999
Q ss_pred EcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCC
Q 037878 860 ISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 860 i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
|+|+.++.||+++++.+.+.|. ++||+|||+++++ ||.++|+||.||+||++|++|+|.|||++|+++++|
T Consensus 370 v~~~~~~~gy~~~~~~~~~~~~--------~g~~~TGDl~~~~~~g~~~~~GR~~~~i~~~G~~i~~~~IE~~l~~~~~v 441 (524)
T PRK06188 370 VRGPLVMDGYWNRPEETAEAFR--------DGWLHTGDVAREDEDGFYYIVDRKKDMIVTGGFNVFPREVEDVLAEHPAV 441 (524)
T ss_pred EECcchhhhhcCChHHhhhhhc--------CCceeecceEEEcCCccEEEEeccccceecCCEEECHHHHHHHHHhCCCe
Confidence 9999999999999999988874 3799999999996 999999999999999999999999999999999998
Q ss_pred cCCceeEEEeccccccccccccccCCCCceEEEEEEEecCC-CCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCC
Q 037878 939 IRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDG-KPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTT 1017 (2280)
Q Consensus 939 ~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~-~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~ 1017 (2280)
.+ ++|++.+++..+ +....+++. .++ .....++.+.+++.+.. ++ .|..++.+++||+|+
T Consensus 442 ~~---~~v~~~~~~~~~----------~~~~~~v~~--~~~~~~~~~~l~~~~~~~l~~-~~---~p~~i~~v~~~P~t~ 502 (524)
T PRK06188 442 AQ---VAVIGVPDEKWG----------EAVTAVVVL--RPGAAVDAAELQAHVKERKGS-VH---APKQVDFVDSLPLTA 502 (524)
T ss_pred eE---EEEEeccCCCcC----------ceEEEEEEE--CCCCCCCHHHHHHHHHHhccc-CC---CCcEEEEecCCCCCc
Confidence 65 788887664322 222233322 222 22224566666665543 33 444555668999999
Q ss_pred CcccchHHHHHHhhcCCC
Q 037878 1018 SGKIKRFECLKQFVDGTL 1035 (2280)
Q Consensus 1018 sGKvdR~~L~~~~~~~~~ 1035 (2280)
+||+||++|+++|.++.+
T Consensus 503 ~gKi~r~~L~~~~~~~~~ 520 (524)
T PRK06188 503 LGKPDKKALRARYWEGRG 520 (524)
T ss_pred cccccHHHHHHHHHhhcc
Confidence 999999999999877654
No 106
>PRK06710 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=1.9e-49 Score=536.97 Aligned_cols=494 Identities=23% Similarity=0.362 Sum_probs=372.3
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.++++..+.. .|+++|+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+.++++++|
T Consensus 24 ~~~~~~~~~~a~~--~p~~~a~~~~~------~~~ty~eL~~~~~~la~~L~~~---gv~~gd~V~i~~~~~~~~~~~~l 92 (563)
T PRK06710 24 QPLHKYVEQMASR--YPEKKALHFLG------KDITFSVFHDKVKRFANYLQKL---GVEKGDRVAIMLPNCPQAVIGYY 92 (563)
T ss_pred ccHHHHHHHHHHH--CCCceEEEecC------eeecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCChHHHHHHH
Confidence 5788888887776 48999987642 5799999999999999999988 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC----CCCCCcccccccc---------
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS----WPNLPWLHTDSWV--------- 615 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~----~~~~~~~~~~~~~--------- 615 (2280)
||+++|++++|++|..+.++ +..+++.++++.+++++.......... .............
T Consensus 93 A~~~~G~~~vpi~p~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (563)
T PRK06710 93 GTLLAGGIVVQTNPLYTERE-------LEYQLHDSGAKVILCLDLVFPRVTNVQSATKIEHVIVTRIADFLPFPKNLLYP 165 (563)
T ss_pred HHHHcCeEEeccCcccCHHH-------HHHHHhccCCeEEEEeccchhhhhccchhhccceeEEeccccccccccccccc
Confidence 99999999999999999887 889999999999999764332111000 0000000000000
Q ss_pred -------------ccc------ccc--ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH-HcCC
Q 037878 616 -------------KNS------KNL--LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK-RYKS 673 (2280)
Q Consensus 616 -------------~~~------~~~--~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~-~~~~ 673 (2280)
... ... ............++++++|+|||||||.||||+++|+++......... .++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 245 (563)
T PRK06710 166 FVQKKQSNLVVKVSESETIHLWNSVEKEVNTGVEVPCDPENDLALLQYTGGTTGFPKGVMLTHKNLVSNTLMGVQWLYNC 245 (563)
T ss_pred hhhcccccccccccccchhhhhhhhhhccccccccccCCCCCEEEEEcCCCCCCCCceEEEehHHHHHHHHHHHhhccCC
Confidence 000 000 000000111123578999999999999999999999998765433322 2343
Q ss_pred C-CCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccccc
Q 037878 674 T-SKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDK 752 (2280)
Q Consensus 674 ~-~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~ 752 (2280)
. .++++++++|++|.+++...++.++..|+++++.++ + ++..+++.++++++|++.++|+.+..++.....
T Consensus 246 ~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~~~--~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~---- 317 (563)
T PRK06710 246 KEGEEVVLGVLPFFHVYGMTAVMNLSIMQGYKMVLIPK--F--DMKMVFEAIKKHKVTLFPGAPTIYIALLNSPLL---- 317 (563)
T ss_pred CCCCceEEEeCchHHHHHHHHHHHHHHHcCCeEEEcCC--C--CHHHHHHHHHHcCCeEEeccHHHHHHHHcCCcc----
Confidence 3 456889999999999987777888999999988653 2 789999999999999999999998877643211
Q ss_pred ccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCC
Q 037878 753 VRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQN 832 (2280)
Q Consensus 753 ~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p 832 (2280)
...+++++|.+++||+++++++.+++.+.+ ++.++|.||+||++.+++...... ....+++|.|
T Consensus 318 -~~~~~~~lr~v~~gg~~~~~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~G~~ 381 (563)
T PRK06710 318 -KEYDISSIRACISGSAPLPVEVQEKFETVT------GGKLVEGYGLTESSPVTHSNFLWE---------KRVPGSIGVP 381 (563)
T ss_pred -ccCChhhhhheeeCCCcCCHHHHHHHHHhh------CCCEecccccccCccccccCcccc---------cccCCccCCC
Confidence 124578999999999999999999988764 467999999999987544321110 1123678999
Q ss_pred CCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEec
Q 037878 833 DPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGR 911 (2280)
Q Consensus 833 ~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR 911 (2280)
.+++.++++|++++ ..++.|+.|||+++|+.+++||+++|+.|++.|. ++||+|||+++++ ||.++++||
T Consensus 382 ~~~~~~~i~~~~~~-~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~--------~g~~~TGD~~~~~~~g~~~~~GR 452 (563)
T PRK06710 382 WPDTEAMIMSLETG-EALPPGEIGEIVVKGPQIMKGYWNKPEETAAVLQ--------DGWLHTGDVGYMDEDGFFYVKDR 452 (563)
T ss_pred CCCCeEEEEECCCC-ccCCCCCceEEEEecCccchhhhCChHHHhhhcc--------cCcccccceEEEcCCCcEEEeec
Confidence 99999999997655 4457999999999999999999999999988774 3799999999996 999999999
Q ss_pred CCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHH
Q 037878 912 IKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENI 990 (2280)
Q Consensus 912 ~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l 990 (2280)
+||+||++|+||+|.|||++|.++++|.+ ++|++++++..+ +....+++ ..++.. ...++.+.+
T Consensus 453 ~dd~i~~~G~~v~p~eiE~~l~~~~~v~~---~~v~~~~~~~~g----------~~~~~~v~--~~~~~~~~~~~l~~~~ 517 (563)
T PRK06710 453 KKDMIVASGFNVYPREVEEVLYEHEKVQE---VVTIGVPDPYRG----------ETVKAFVV--LKEGTECSEEELNQFA 517 (563)
T ss_pred cccEEEECCEEECHHHHHHHHHhCcceee---EEEEccccCCcC----------ceeEEEEE--ECCCCCCCHHHHHHHH
Confidence 99999999999999999999999999875 888887765322 22222222 223322 234555666
Q ss_pred HHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 991 KTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 991 ~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+++++. +++| ..+..+++||+|++||++|++|++++..
T Consensus 518 ~~~l~~-~~~P---~~~~~v~~iP~t~~GKi~r~~L~~~~~~ 555 (563)
T PRK06710 518 RKYLAA-YKVP---KVYEFRDELPKTTVGKILRRVLIEEEKR 555 (563)
T ss_pred HHhccc-ccCC---cEEEEcccCCCCccchhhHHHHHHHHhh
Confidence 655553 4444 4455569999999999999999887644
No 107
>PLN03051 acyl-activating enzyme; Provisional
Probab=100.00 E-value=3.3e-50 Score=534.38 Aligned_cols=453 Identities=13% Similarity=0.077 Sum_probs=323.4
Q ss_pred eCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccc------hhhccC-CCCCCCcc
Q 037878 537 YVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYH------SAVRVG-SWPNLPWL 609 (2280)
Q Consensus 537 ~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~------~~~~~~-~~~~~~~~ 609 (2280)
++|++|+++++|||+++|+++||+++.++.++ +.++++++++++++++.... ..+... .......+
T Consensus 1 ~~n~~e~~~~~lA~~~~Gav~vpl~~~~~~~e-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~i 73 (499)
T PLN03051 1 MPMTVDAVIIYLAIVLAGCVVVSVADSFSAKE-------IATRLDISGAKGVFTQDVVLRGGRALPLYSKVVEAAPAKAI 73 (499)
T ss_pred CCCcHHHHHHHHHHHHcCCEEEeeCCCCCHHH-------HHHHHHhcCceEEEecCceeeCCeeecchhhhhhcccceEE
Confidence 58999999999999999999999999999888 89999999999999975421 111000 00000000
Q ss_pred c------------------cccccccccccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH
Q 037878 610 H------------------TDSWVKNSKNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK 669 (2280)
Q Consensus 610 ~------------------~~~~~~~~~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~ 669 (2280)
. +.++........ ...........++|+++|+|||||||.||||++||+|++........
T Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~ 153 (499)
T PLN03051 74 VLPAAGEPVAVPLREQDLSWCDFLGVAAAQGSVGGNEYSPVYAPVESVTNILFSSGTTGEPKAIPWTHLSPLRCASDGWA 153 (499)
T ss_pred EEeccCcccCCccccCcccHHHHHhhhccccccccccCCcccCCccceEEEEeCCCCCCCCceEEEccchHHHHHHHHHH
Confidence 0 000000000000 00000111235689999999999999999999999998877666666
Q ss_pred HcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcc
Q 037878 670 RYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESS 749 (2280)
Q Consensus 670 ~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~ 749 (2280)
.++++++|++++.+|++|++++. .++.+++.|+++++.+.. .++..+++.++++++|++.++|+++..+.+....
T Consensus 154 ~~~~~~~d~~l~~~pl~h~~g~~-~~~~~l~~G~t~v~~~~~---~~~~~~~~~i~~~~vt~~~~vP~~~~~l~~~~~~- 228 (499)
T PLN03051 154 HMDIQPGDVVCWPTNLGWMMGPW-LLYSAFLNGATLALYGGA---PLGRGFGKFVQDAGVTVLGLVPSIVKAWRHTGAF- 228 (499)
T ss_pred hcCCCCCCEEEEccCcceeeehH-HHHHHHHcCCEEEecCCC---CCcHHHHHHHHHhCCcEEEeCHHHHHHHHhcCcc-
Confidence 67888999999999999999974 688899999999887531 2678899999999999999999999887653210
Q ss_pred cccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccc
Q 037878 750 KDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYV 829 (2280)
Q Consensus 750 ~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~v 829 (2280)
.....++++||.+++|||++++++.+++.+.. . .++.++|.||+||++..++..... . ....+++
T Consensus 229 --~~~~~~~~~Lr~i~~gG~~~~~~~~~~~~~~~-~---~~~~~~~~YG~TE~~~~~~~~~~~-~--------~~~~~~~ 293 (499)
T PLN03051 229 --AMEGLDWSKLRVFASTGEASAVDDVLWLSSVR-G---YYKPVIEYCGGTELASGYISSTLL-Q--------PQAPGAF 293 (499)
T ss_pred --ccccCCchhheEEEecCCCCCHHHHHHHHHhc-c---ccceeEeeeccccccceeeccccc-C--------CCCCccc
Confidence 01125688999999999999999988766532 1 135699999999987543322110 0 1123678
Q ss_pred cCCCCCceEEEEcCCCCcccCCCC--CeeEEEEcCCCc--ccccCCCchhhHHHHhhhc--cCCCCCceeecCcEEEEE-
Q 037878 830 DQNDPDVDIRIVNPETSEEIGEPG--KEGEVWISSPSA--GIGYWGREELSQITFRNEL--QNNRGRKYTRTGDLGRII- 902 (2280)
Q Consensus 830 G~p~pg~~v~Ivd~~~~~~~~p~G--~~GEL~i~Gp~v--~~GY~~~p~~t~~~f~~~~--~~~~~~~~yrTGDlgr~~- 902 (2280)
|+|.++++++|+|+++. .++.| ++|||+|+||.+ +.||||++ .++ .|.+.. ....+.+||||||+|+++
T Consensus 294 G~p~~~~~~~ivd~~g~--~~~~g~~~~Gel~v~g~~~~~~~gy~~~~-~~~-~~~~g~~~~~~~~~~~~~TGDlg~~d~ 369 (499)
T PLN03051 294 STASLGTRFVLLNDNGV--PYPDDQPCVGEVALAPPMLGASDRLLNAD-HDK-VYYKGMPMYGSKGMPLRRHGDIMKRTP 369 (499)
T ss_pred cCCCCCceEEEECCCCC--CCCCCCCcceEEEEecCcCCCCccccCCc-ccc-eeeecCCccccCCcceeecCCeEEECC
Confidence 99999999999997753 34677 589999999977 57999865 333 343211 111345799999999997
Q ss_pred CCeEEEEecCCCeEEECCeeechHHHHHHHHh-ccCCcCCceeEEEeccccccccccccccCCCCceEEEEEE-EecCCC
Q 037878 903 DGKFFITGRIKDLIIVAGRNVYSADVEKTVES-STEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIA-EVRDGK 980 (2280)
Q Consensus 903 dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~-~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~-~~~~~~ 980 (2280)
||+|+|+||+|||||++|+||+|.|||++|.+ ||+|.+ |+|++++++..+ .+.+.+++.. ...++.
T Consensus 370 dG~l~~~gR~~d~ik~~G~~v~p~EIE~~l~~~~p~V~~---aavvg~~d~~~g---------~~~~~a~v~~~v~~~~~ 437 (499)
T PLN03051 370 GGYFCVQGRADDTMNLGGIKTSSVEIERACDRAVAGIAE---TAAVGVAPPDGG---------PELLVIFLVLGEEKKGF 437 (499)
T ss_pred CCcEEEEeccCCEEeeCCEECCHHHHHHHHHhcCCCcce---EEEEEecCCCCC---------ceEEEEEEEcceecccc
Confidence 99999999999999999999999999999996 999976 899999886533 1223333310 122232
Q ss_pred --CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 981 --PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 981 --~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
...+++++++++++.+++.....+-.+..+++||+|++|||||++|++.+.+
T Consensus 438 ~~~~~~~l~~~~~~~l~~~l~~~~~~~~i~~v~~lP~t~~GKi~r~~L~~~~~~ 491 (499)
T PLN03051 438 DQARPEALQKKFQEAIQTNLNPLFKVSRVKIVPELPRNASNKLLRRVLRDQLKK 491 (499)
T ss_pred cccchHHHHHHHHHHHHhhcCCccCCceEEEcCCCCCCCCccHHHHHHHHHHHH
Confidence 2336777788777766443211122344569999999999999999887543
No 108
>PRK07059 Long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.4e-49 Score=535.10 Aligned_cols=493 Identities=25% Similarity=0.347 Sum_probs=372.1
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++.+.+++ .|+++|+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++
T Consensus 22 ~~~i~~~l~~~a~~--~p~~~a~~~~~------~~lTy~~l~~~~~~~a~~L~~~---gi~~gd~V~i~~~n~~~~~~~~ 90 (557)
T PRK07059 22 YPSLADLLEESFRQ--YADRPAFICMG------KAITYGELDELSRALAAWLQSR---GLAKGARVAIMMPNVLQYPVAI 90 (557)
T ss_pred CCCHHHHHHHHHHH--cCCCceEEEcC------ceeeHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCHHHHHHH
Confidence 45789999888876 48999987643 4799999999999999999998 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC-CCCCCCcccc---c-----------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG-SWPNLPWLHT---D----------- 612 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~-~~~~~~~~~~---~----------- 612 (2280)
+||+++|++++|+++..+.++ +.+++++++++.+++++.....+... .......+.. .
T Consensus 91 la~~~~G~~~v~v~~~~~~~~-------~~~~~~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (557)
T PRK07059 91 AAVLRAGYVVVNVNPLYTPRE-------LEHQLKDSGAEAIVVLENFATTVQQVLAKTAVKHVVVASMGDLLGFKGHIVN 163 (557)
T ss_pred HHHHhcCeEEeccCcccCHHH-------HHHHHHccCceEEEEchhhHHHHHHhhcccCCceeEEecccccccccccccc
Confidence 999999999999999988877 88999999999999876543222110 0000000000 0
Q ss_pred -----------cccc-------cccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC--
Q 037878 613 -----------SWVK-------NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK-- 672 (2280)
Q Consensus 613 -----------~~~~-------~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~-- 672 (2280)
.+.. .................++++|+|+|||||||.||||+++|++++..+........
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~il~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~ 243 (557)
T PRK07059 164 FVVRRVKKMVPAWSLPGHVRFNDALAEGARQTFKPVKLGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQMEAWLQPA 243 (557)
T ss_pred cccccccccccccCCCCcccHHHHhhccCCCCCCCCCCCcCceEEEEeCCCCCCCCcEEEeecHHHHHHHHHHhhhhccc
Confidence 0000 00000000011123456789999999999999999999999998876544332221
Q ss_pred --C---CCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHh
Q 037878 673 --S---TSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLE 747 (2280)
Q Consensus 673 --~---~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~ 747 (2280)
. .....++..+|++|.+++....+.++..|++.++.+.. .++..+++.++++++|.+..+|.++..+.....
T Consensus 244 ~~~~~~~~~~~~~~~~pl~~~~~~~~~~~~~~~~g~~~~~~~~~---~~~~~~~~~i~~~~vt~~~~~p~~~~~l~~~~~ 320 (557)
T PRK07059 244 FEKKPRPDQLNFVCALPLYHIFALTVCGLLGMRTGGRNILIPNP---RDIPGFIKELKKYQVHIFPAVNTLYNALLNNPD 320 (557)
T ss_pred ccccCCCCCcEEEEeCCcHHHHHHHHHHHHHHhhcceEEEecCC---cCHHHHHHHHHHhCCeeeecCHHHHHHHHcCcC
Confidence 1 12457788899999998776777888888887766532 378889999999999999999999988765322
Q ss_pred cccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeec
Q 037878 748 SSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCG 827 (2280)
Q Consensus 748 ~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g 827 (2280)
. ...+++++|.++.||+++++.+.++|.+.+ ++++++.||+||++.+++...... ....+
T Consensus 321 ~-----~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~ 380 (557)
T PRK07059 321 F-----DKLDFSKLIVANGGGMAVQRPVAERWLEMT------GCPITEGYGLSETSPVATCNPVDA---------TEFSG 380 (557)
T ss_pred c-----CcCCchhheEEEeccccCCHHHHHHHHHHh------CCCeeeccccccccchhhcCCCCC---------CCcCC
Confidence 1 224678999999999999999999998864 467999999999987765432211 11236
Q ss_pred cccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeE
Q 037878 828 YVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKF 906 (2280)
Q Consensus 828 ~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l 906 (2280)
++|.|+++++++|+|+++ ..+|.|+.|||+++|+.++.||+++++.|++.|.. ++||+|||+++++ ||.+
T Consensus 381 ~vG~p~~g~~v~i~d~~~--~~~~~g~~Gel~v~g~~~~~gY~~~~~~~~~~~~~-------~g~~~TGDl~~~~~~g~~ 451 (557)
T PRK07059 381 TIGLPLPSTEVSIRDDDG--NDLPLGEPGEICIRGPQVMAGYWNRPDETAKVMTA-------DGFFRTGDVGVMDERGYT 451 (557)
T ss_pred cccCccCCcEEEEECCCC--CCCCCCCceEEEEeCCccchhhhcCHHHHhhhccc-------CCceecCcEEEEcCCCcE
Confidence 789999999999999775 34579999999999999999999999999887753 4899999999996 9999
Q ss_pred EEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHH
Q 037878 907 FITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDV 986 (2280)
Q Consensus 907 ~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l 986 (2280)
+++||+||+||++|++|+|.|||++|.++++|.+ ++|++++++..+ +...+++. ..+.....+++
T Consensus 452 ~~~GR~~~~i~~~G~~i~p~~iE~~l~~~~~V~~---~~v~~~~~~~~g----------e~~~~~v~--~~~~~~~~~~l 516 (557)
T PRK07059 452 KIVDRKKDMILVSGFNVYPNEIEEVVASHPGVLE---VAAVGVPDEHSG----------EAVKLFVV--KKDPALTEEDV 516 (557)
T ss_pred EEecccccceEECCEEEcHHHHHHHHHhCCceeE---EEEEecccCCCC----------eeEEEEEE--eCCCCCCHHHH
Confidence 9999999999999999999999999999999875 788887665322 22223322 22222233456
Q ss_pred HHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 987 IENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 987 ~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
.+.+++++.. + ..|..+..++++|+|.+||++|+.|+++
T Consensus 517 ~~~~~~~l~~-~---~~P~~i~~v~~~P~t~~GK~~r~~L~~~ 555 (557)
T PRK07059 517 KAFCKERLTN-Y---KRPKFVEFRTELPKTNVGKILRRELRDG 555 (557)
T ss_pred HHHHHHhccc-c---cCCcEEEEeccCCCCcccceeHHHHHhh
Confidence 6666666554 3 3444555669999999999999987654
No 109
>PRK08751 putative long-chain fatty acyl CoA ligase; Provisional
Probab=100.00 E-value=2.5e-49 Score=535.66 Aligned_cols=492 Identities=24% Similarity=0.340 Sum_probs=371.4
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHH-hcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLL-TSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~-~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
.++.+++++.+++ .|+++|+...+ +.+||+||.++++++|+.|. +. |+++||+|+++++|++++++++
T Consensus 25 ~~~~~~l~~~~~~--~~~~~a~~~~~------~~~Ty~el~~~~~~la~~L~~~~---g~~~g~~V~i~~~~~~~~~~~~ 93 (560)
T PRK08751 25 RTVAEVFATSVAK--FADRPAYHSFG------KTITYREADQLVEQFAAYLLGEL---QLKKGDRVALMMPNCLQYPIAT 93 (560)
T ss_pred CcHHHHHHHHHHh--CCCCceEEECC------ceeeHHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCHHHHHHH
Confidence 4678888887776 48899987532 57999999999999999996 46 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCccccc--c----------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLHTD--S---------- 613 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~~~--~---------- 613 (2280)
|||+++|++++|++|..+.++ +..++++++++.++++......+... ..+....+... .
T Consensus 94 lA~~~~G~~~v~l~p~~~~~~-------~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 166 (560)
T PRK08751 94 FGVLRAGLTVVNVNPLYTPRE-------LKHQLIDSGASVLVVIDNFGTTVQQVIADTPVKQVITTGLGDMLGFPKAALV 166 (560)
T ss_pred HHHHHhCeEEeccCccCCHHH-------HHHHHHhcCCeEEEEcchhHHHHHHHhhCCCccEEEEechhhhcccccchhh
Confidence 999999999999999998887 78899999999999876543221110 00000000000 0
Q ss_pred -------------cc-------ccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC-
Q 037878 614 -------------WV-------KNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK- 672 (2280)
Q Consensus 614 -------------~~-------~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~- 672 (2280)
.. ..................++++++|+|||||||.||||+++|+++...+......+.
T Consensus 167 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~ 246 (560)
T PRK08751 167 NFVVKYVKKLVPEYRINGAIRFREALALGRKHSMPTLQIEPDDIAFLQYTGGTTGVAKGAMLTHRNLVANMQQAHQWLAG 246 (560)
T ss_pred hhhhhhhhccccccCCCccccHHHHHhccCCCCCCCCCCCcccEEEEEcCCCCCCCCCEEEEccHHHHHHHHHHHHhhcc
Confidence 00 000000000011122346789999999999999999999999999888776655543
Q ss_pred ---CCC-CcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhc
Q 037878 673 ---STS-KTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLES 748 (2280)
Q Consensus 673 ---~~~-~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~ 748 (2280)
+.. +++++.++|++|.+++....+.++..|++.++... . .++..+++.++++++|++..+|..+..+.+...
T Consensus 247 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~-~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~- 322 (560)
T PRK08751 247 TGKLEEGCEVVITALPLYHIFALTANGLVFMKIGGCNHLISN-P--RDMPGFVKELKKTRFTAFTGVNTLFNGLLNTPG- 322 (560)
T ss_pred ccccCCCCceEEEecChHHHHHHHHhhhhHhhccceEEEecC-c--CCHHHHHHHHHhcceeEecChHHHHHHHHcCcC-
Confidence 223 46778889999999987666777777777666543 2 378899999999999999999999988765321
Q ss_pred ccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeecc
Q 037878 749 SKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGY 828 (2280)
Q Consensus 749 ~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~ 828 (2280)
....+++++|.+++||+++++++.++|.+.+ ++.+++.||+||++..++...... ....++
T Consensus 323 ----~~~~~l~~lr~v~~gG~~~~~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~ 383 (560)
T PRK08751 323 ----FDQIDFSSLKMTLGGGMAVQRSVAERWKQVT------GLTLVEAYGLTETSPAACINPLTL---------KEYNGS 383 (560)
T ss_pred ----cCCcchhhheeeeeCCCCCCHHHHHHHHHHh------CCeEEEeeccccCCCceecccccc---------cccCCC
Confidence 1235678999999999999999999998864 467999999999987654332110 112367
Q ss_pred ccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEE
Q 037878 829 VDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFF 907 (2280)
Q Consensus 829 vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~ 907 (2280)
+|.|+++++++|+|+++ ..++.|+.|||+|+|+.+++||+++|+.|++.|.. ++||+|||+|+++ +|.++
T Consensus 384 vG~~~~~~~v~i~d~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~-------~g~~~TGD~~~~~~~g~l~ 454 (560)
T PRK08751 384 IGLPIPSTDACIKDDAG--TVLAIGEIGELCIKGPQVMKGYWKRPEETAKVMDA-------DGWLHTGDIARMDEQGFVY 454 (560)
T ss_pred cCccCCCceEEEECCCC--CCCCCCCceEEEEecCccchhhcCChhhhhhcccc-------CCCccccceEEEcCCceEE
Confidence 89999999999999765 34579999999999999999999999999887743 4899999999997 99999
Q ss_pred EEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHH
Q 037878 908 ITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVI 987 (2280)
Q Consensus 908 ~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~ 987 (2280)
++||.||+||++|++|+|.|||++|.++++|.+ |+|++++++..+ +.+.++++. .......+++.
T Consensus 455 i~GR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~---~~v~~~~~~~~g----------e~~~~~v~~--~~~~~~~~~l~ 519 (560)
T PRK08751 455 IVDRKKDMILVSGFNVYPNEIEDVIAMMPGVLE---VAAVGVPDEKSG----------EIVKVVIVK--KDPALTAEDVK 519 (560)
T ss_pred EEeechhheeECCEEEcHHHHHHHHHhCcCeee---eEEEecCCCCCC----------ceEEEEEEc--CCCCCCHHHHH
Confidence 999999999999999999999999999999865 788887765322 222233221 22222235666
Q ss_pred HHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 988 ENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 988 ~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
+.+++++.. ++.| ..++.+++||+|.+||++|++|++.
T Consensus 520 ~~~~~~l~~-~~~P---~~v~~v~~lP~t~~gKv~r~~L~~~ 557 (560)
T PRK08751 520 AHARANLTG-YKQP---RIIEFRKELPKTNVGKILRRELRDA 557 (560)
T ss_pred HHHHHhhhh-ccCC---eEEEEhhhCCCCccccccHHHHHHh
Confidence 777777664 4444 4455669999999999999998765
No 110
>PRK07445 O-succinylbenzoic acid--CoA ligase; Reviewed
Probab=100.00 E-value=1.6e-49 Score=518.69 Aligned_cols=428 Identities=18% Similarity=0.209 Sum_probs=331.5
Q ss_pred eccHHHHHHHHHHHHHHHHhcCCCCC-CCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHH
Q 037878 502 QSTYEELDANASRIAHKLLTSRKPVI-KPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENIS 580 (2280)
Q Consensus 502 ~lTY~eL~~~a~~lA~~L~~~~~~Gv-~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il 580 (2280)
-+.|+||.++++++|+.|++. |+ ++|++|+++++|+++++++++||+++|++++|+++..+.++ +.+++
T Consensus 19 ~~~~~el~~~~~~~a~~L~~~---g~~~~~~~V~i~~~n~~e~~~~~~A~~~~G~~~vpl~~~~~~~~-------~~~~~ 88 (452)
T PRK07445 19 GYNSQRFYQLAQQLYLQLQQL---ATPRTPPKILLAESDPLQFLAAFLAAVAAGCPVFLANPHWGQQE-------WQQVL 88 (452)
T ss_pred ecChHHHHHHHHHHHHHHHHh---cCCCCCCeEEEecCCCHHHHHHHHHHHHhCcEEEeeccCCCHHH-------HHHHH
Confidence 357999999999999999998 77 57999999999999999999999999999999999999888 88999
Q ss_pred hhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHH
Q 037878 581 KSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGL 660 (2280)
Q Consensus 581 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l 660 (2280)
+++++++++++.+..... .... .. ......++++++++|||||||.||||++||+++
T Consensus 89 ~~~~~~~~i~~~~~~~~~------------~~~~--------~~---~~~~~~~~~~~~i~~TSGTTG~PKgV~~t~~~l 145 (452)
T PRK07445 89 NLVQPDQIWGLDQLKLSH------------PPPL--------PS---QGILPNLETGWIMIPTGGSSGQIRFAIHTWETL 145 (452)
T ss_pred HhcCCCEEEecCcccccc------------CCCC--------Cc---cccCCCCCCcEEEEeCCCCCCCCcEEEechHHH
Confidence 999999999865422100 0000 00 011235689999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHH
Q 037878 661 IHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFE 740 (2280)
Q Consensus 661 ~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~ 740 (2280)
.+.+......++..+ ++.++++|++|.+|+. .++.++..|+++++.+...+ +.. .....++++|++..+|++++
T Consensus 146 ~~~~~~~~~~~~~~~-~~~~~~~Pl~h~~g~~-~~~~~l~~G~t~v~~~~~~~--~~~--~~~~~~~~~t~~~~vP~~l~ 219 (452)
T PRK07445 146 TASVQGFQRYFQLQQ-VNSFCVLPLYHVSGLM-QFMRSFLTGGKLVILPYKRL--KSG--QELPPNPSDFFLSLVPTQLQ 219 (452)
T ss_pred HHHHHHHHHHhcCCC-CceEeccCchhhhhHH-HHHHHHHcCCeEEEcChHhc--cch--hhhhhhcCceEEEehHHHHH
Confidence 988888777777655 4678899999999984 67788999999988753222 211 23334788899999999998
Q ss_pred HHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecC
Q 037878 741 LMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDW 820 (2280)
Q Consensus 741 ~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~ 820 (2280)
.+.+. . ..+++++|.+++||+++++++.+++.+. ++.++|.||+||++..++..... ..
T Consensus 220 ~l~~~---~-----~~~l~~l~~i~~gG~~l~~~~~~~~~~~-------~~~l~~~YG~TE~~~~~~~~~~~-~~----- 278 (452)
T PRK07445 220 RLLQL---R-----PQWLAQFRTILLGGAPAWPSLLEQARQL-------QLRLAPTYGMTETASQIATLKPD-DF----- 278 (452)
T ss_pred HHHhh---C-----hhhhhcceEEEECCccCCHHHHHHHHhc-------CCeEecCcchhhhcccccccCch-hh-----
Confidence 87652 1 1347899999999999999999887642 46799999999987554322111 00
Q ss_pred CCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEE
Q 037878 821 QGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGR 900 (2280)
Q Consensus 821 ~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr 900 (2280)
....+++|+|+|+++++|+ .|+.|||+|+||+++.||++++. ..++||+|||+|+
T Consensus 279 --~~~~~~~G~~~p~~~v~i~----------~g~~Gel~v~g~~~~~gY~~~~~-------------~~~g~~~TGDl~~ 333 (452)
T PRK07445 279 --LAGNNSSGQVLPHAQITIP----------ANQTGNITIQAQSLALGYYPQIL-------------DSQGIFETDDLGY 333 (452)
T ss_pred --ccCCCcCCccCCCCeEEEc----------CCCcceEEEeCCccchhhcCCcc-------------CCCCEEECCCEEE
Confidence 1123568999999999987 35689999999999999997542 1248999999999
Q ss_pred EE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCC
Q 037878 901 II-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDG 979 (2280)
Q Consensus 901 ~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~ 979 (2280)
++ ||+++|.||+||+||++|+||+|.|||++|.+||+|.+ |+|++++++..+ +.+.++++. .++
T Consensus 334 ~d~dG~l~~~GR~dd~I~~~G~~V~p~eIE~~l~~~p~V~~---a~V~g~~~~~~g----------~~~~a~vv~--~~~ 398 (452)
T PRK07445 334 LDAQGYLHILGRNSQKIITGGENVYPAEVEAAILATGLVQD---VCVLGLPDPHWG----------EVVTAIYVP--KDP 398 (452)
T ss_pred EcCCCCEEEEeecCCEEEECCEEECHHHHHHHHHhCCCcce---EEEEeccCcCCC----------cEEEEEEEe--CCC
Confidence 96 99999999999999999999999999999999999975 899998876443 222333322 222
Q ss_pred CCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcC
Q 037878 980 KPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 980 ~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
....+++.+.++++++. +++ |..++.+++||+|++||++|++|++++.+.
T Consensus 399 ~~~~~~l~~~~~~~L~~-~~~---P~~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 448 (452)
T PRK07445 399 SISLEELKTAIKDQLSP-FKQ---PKHWIPVPQLPRNPQGKINRQQLQQIAVQR 448 (452)
T ss_pred CCCHHHHHHHHHHhCCc-ccC---CeEEEEecCCCCCCCcccCHHHHHHHHHHh
Confidence 22235666666666553 444 444555699999999999999999887653
No 111
>TIGR02353 NRPS_term_dom non-ribosomal peptide synthetase terminal domain of unknown function. This domain is found exclusively in non-ribosomal peptide synthetases and always as the final domain in the polypeptide. This domain is roughly 700 amino acids in size and is found in polypeptides roughly twice that size.
Probab=100.00 E-value=4.5e-49 Score=522.85 Aligned_cols=383 Identities=17% Similarity=0.226 Sum_probs=294.8
Q ss_pred HHHHHHhccccCCcccCCC-ccccchhhHHHHHHHHHHHHHHHHhhhhcccCchHHHHHHHHcCCEECCCcEECccccCC
Q 037878 1255 ISITIFGNSFLRPNYTLNP-EVSIWSADFVKWWALYKVHEVSCKVLAVYLRGTVFLNWWFEMLGAKLGSSVLLDTVDITD 1333 (2280)
Q Consensus 1255 ~~~~~~~~~~l~~~~~~~p-~yp~~~~~~~r~w~~~~~~~~~~~~~~~~~~~~~~~~~~~R~lGa~Ig~~v~i~~~~~~~ 1333 (2280)
+++.++.||++.++ +|| +||+||++|+|||+++|+++.+...+ ..+.++++++.|||+|||||||+|+|++....+
T Consensus 293 ~~~~~~~krll~~~--~kpG~yp~~~~~~~r~W~~~~l~~~~~~~~-~~l~~s~~~~~ylRlLGAkIGk~v~i~t~~~~~ 369 (695)
T TIGR02353 293 VLLLAAVRLLLNLV--LKPGRYYVHSGFYYQAWTVQQLMDNSRVLL-FPLYASSYIPHWYRALGAKIGKVAEISSAQHEV 369 (695)
T ss_pred HHHHHHHHHHhcCC--CCCccccchhHHHHHHHHHHHHHHHHHHHH-HHhcccHHHHHHHHHhCCeeCCCeEeccccCCC
Confidence 33366679999999 899 99999999999999999998886543 346889999999999999999999999888777
Q ss_pred CCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCccCC------CCccccC
Q 037878 1334 PSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKSEG------GKPILKS 1407 (2280)
Q Consensus 1334 ~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v~~------~~~~~~g 1407 (2280)
|||++||||++|++++.+.++++++|.+++++|+||+||+||+++++.||++||||+.||++|+++. |+.| .|
T Consensus 370 pdLltIG~g~~iad~v~~~~~~~~~g~l~~~~i~IG~~afVGn~~vv~pG~~ig~~~llg~~S~~p~~~~~~~g~~w-~G 448 (695)
T TIGR02353 370 PDLTDIGEETFIADGLLMGNARLSGGWFRLGRTRIGRRSFLGNSGYYPPGAKTGDNVLLGVLSMTPKDGKVREGVGW-LG 448 (695)
T ss_pred CcceEECCCcEeccCcEEeeeEEeCCeEEEeeEEECCCcEEcCceeECCCCEeCCCCEEeecccCCCCccCCCCCEE-eC
Confidence 9999999999999999999999999999999999999999999999999999999999999998844 5677 68
Q ss_pred CCceeeccCCCcc---ccccccchhHHHHHhhhhhhHHHHHHHHH--HHH-HHHHHHhccCCCCchhhHHHHhhccccch
Q 037878 1408 TNANYVQKGGAVS---KISTHRTQDEAIHQFIGIYIVSFLSTLSA--AIT-YFLYIWLSQKPASPRHFAFLCISGAFHWL 1481 (2280)
Q Consensus 1408 ~p~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1481 (2280)
||+.......... ...+..++.+....+...+...++..... .+. +.+...... . +.....|
T Consensus 449 SPa~~l~~~~~~~~~~~~~~~~p~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-------~----~~~~~~~- 516 (695)
T TIGR02353 449 SPPFELPRRVNRDDELEALTFEPDPRRRLARKNVENLRIILPFLLVQWAMLFALVVLDLQ-------A----LDDYTEW- 516 (695)
T ss_pred CCCeeCCcccccccccccccCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH-------H----HhhhhHH-
Confidence 9987653211111 11112221111222222333322211111 111 111000000 0 0000000
Q ss_pred hHHHhhhhhhccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccc------cccchhhHHHHHHHHHhh-hhh
Q 037878 1482 PFTIIAYATMFASVPANPAYFAISTAVAYLFHGLVLSYLTCILTHFLAGKKE------EKQTHLKAWLCHRITIAC-HLR 1554 (2280)
Q Consensus 1482 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~------~~~~~~~~w~~~~~~~~~-~~~ 1554 (2280)
...++......++.+++..++++++||++.+|.+ .+.+.||.|..++++... .+.
T Consensus 517 ------------------~~~~~~~~~~~~~~~~~~~~~~v~~kwll~gr~~pg~~plws~~~wr~~~~~~~~~~~~~~~ 578 (695)
T TIGR02353 517 ------------------GAVALLAALILMAVGVGAFLILVERKWLVFGRLKPQEHPLWSPFVWLHELHWKLYESVAVPN 578 (695)
T ss_pred ------------------HHHHHHHHHHHHHHHHHHHHHHHhhhheeeCCCCCccccccccceeehhHHHHHHHHHHhhh
Confidence 0111122223344455556778889999988543 344678888888887553 567
Q ss_pred hhhhccCCchHHHHHHHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccC
Q 037878 1555 FAKLLSGTEAFCIYLRLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQ 1634 (2280)
Q Consensus 1555 ~~~~l~gt~~~~~~lR~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~ 1634 (2280)
++..+.||++++.|+|++|+|||++|+|++. .+.++++++|||+|+|+++|.|++|.++++.++.++++||++|+||++
T Consensus 579 ~l~~l~Gt~~~~~~lr~lGa~IG~~v~i~~~-~~~~~dlv~IGd~~~I~~~~~i~~h~~~~~~~~~~~v~IG~~~~IG~~ 657 (695)
T TIGR02353 579 FLRPFRGTPFLPAILRLLGVKIGRGVYIDGT-DLTERDLVTIGDDSTLNEGSVIQTHLFEDRVMKSDTVTIGDGATLGPG 657 (695)
T ss_pred hhhccCCcHHHHHHHHHCCCEECCCeEECCe-eccCCCCeEECCCCEECCCCEEEeccccccccccCCeEECCCCEECCC
Confidence 7899999999999999999999999999985 367789999999999999999999999999999999999999999999
Q ss_pred CeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1635 SLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1635 ~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
|+|++|++|||||+||++|+|++++++|+|++|.||||
T Consensus 658 a~V~~g~~IGd~a~Ig~~SvV~~g~~vp~~s~~~G~Pa 695 (695)
T TIGR02353 658 AIVLYGVVMGEGSVLGPDSLVMKGEEVPAHTRWRGNPA 695 (695)
T ss_pred CEECCCCEECCCCEECCCCEEcCCcccCCCCEEEeccC
Confidence 99999999999999999999999888999999999995
No 112
>PRK06178 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.2e-48 Score=529.46 Aligned_cols=499 Identities=21% Similarity=0.312 Sum_probs=374.4
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.++++++++. .|+++|+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|+++++++++
T Consensus 33 ~~l~~~l~~~a~~--~p~~~al~~~~------~~~Ty~~l~~~~~~la~~L~~~---g~~~g~~V~i~~~n~~~~~~~~l 101 (567)
T PRK06178 33 RPLTEYLRAWARE--RPQRPAIIFYG------HVITYAELDELSDRFAALLRQR---GVGAGDRVAVFLPNCPQFHIVFF 101 (567)
T ss_pred ccHHHHHHHHHHH--CCCceEEEECC------ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCcHHHHHHH
Confidence 5788999988876 48999987543 4799999999999999999988 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCcccc---ccccc--------
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHT---DSWVK-------- 616 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~---~~~~~-------- 616 (2280)
||+++|++++|++|..+.++ +.++++++++++++++....+.+.... ......+.. .+...
T Consensus 102 A~~~~G~~~v~l~p~~~~~~-------~~~~l~~~~~~~ii~~~~~~~~l~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 174 (567)
T PRK06178 102 GILKLGAVHVPVSPLFREHE-------LSYELNDAGAEVLLALDQLAPVVEQVRAETSLRHVIVTSLADVLPAEPTLPLP 174 (567)
T ss_pred HHHHhCeEEeecCCCCCHHH-------HHHHHHhcCCcEEEEccchHHHHHHhhccCCcceEEEeccccccccccccccc
Confidence 99999999999999998777 889999999999999876543222100 000000000 00000
Q ss_pred ---------------cccccc-cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH-HcCCCCCcEE
Q 037878 617 ---------------NSKNLL-AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK-RYKSTSKTVL 679 (2280)
Q Consensus 617 ---------------~~~~~~-~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~-~~~~~~~d~~ 679 (2280)
...... ...........++++|+|+|||||||.||||++||+++...+..... ......++++
T Consensus 175 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~d~~ 254 (567)
T PRK06178 175 DSLRAPRLAAAGAIDLLPALRACTAPVPLPPPALDALAALNYTGGTTGMPKGCEHTQRDMVYTAAAAYAVAVVGGEDSVF 254 (567)
T ss_pred cccccccccccccccHHHHhhccccccccCCCCCCCeEEEEeCCCCCCCCceEEeccHHHHHHHHHHHHHhccCCCCcEE
Confidence 000000 00011122356789999999999999999999999998877655433 3567889999
Q ss_pred EEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCC
Q 037878 680 VSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLS 759 (2280)
Q Consensus 680 l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~ 759 (2280)
+.++|++|.+++...++.++..|+++++.++ .++..++..++++++|....+|..+..+..... ....+++
T Consensus 255 l~~~p~~~~~g~~~~~~~~l~~G~~~~l~~~----~~~~~~~~~i~~~~~t~~~~~~~~~~~l~~~~~-----~~~~~l~ 325 (567)
T PRK06178 255 LSFLPEFWIAGENFGLLFPLFSGATLVLLAR----WDAVAFMAAVERYRVTRTVMLVDNAVELMDHPR-----FAEYDLS 325 (567)
T ss_pred EEecchHHHHHHHHHHHHHHHcCceEEEeCC----CCHHHHHHHHHHhCCeEEeccHHHHHHHHhCCC-----CCCCCcc
Confidence 9999999999987788899999999998763 389999999999999999998888777654321 1224567
Q ss_pred CccEEEEe--cCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccC-CCCceeecCCCceeeccccCCCCCc
Q 037878 760 SMKFLMVA--AEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYG-QGKPIILDWQGRVCCGYVDQNDPDV 836 (2280)
Q Consensus 760 ~Lr~l~~g--Ge~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~-~~~~~~~~~~g~~~~g~vG~p~pg~ 836 (2280)
++|.+..+ |+++++++.++|.+.++ ...+.+.||+||++..++.... ...+. .-....+++|.|+||+
T Consensus 326 ~l~~~~~~~~~~~~~~~~~~~~~~~~g-----~~~~~~~YG~tE~~~~~~~~~~~~~~~~----~~~~~~~~vG~p~~g~ 396 (567)
T PRK06178 326 SLRQVRVVSFVKKLNPDYRQRWRALTG-----SVLAEAAWGMTETHTCDTFTAGFQDDDF----DLLSQPVFVGLPVPGT 396 (567)
T ss_pred hheeeeeccccccCCHHHHHHHHHHhC-----CcccccccccccccccceeccccccCcc----ccccCCcccccccCCc
Confidence 88876544 59999999999988752 2234468999998765443211 10100 0012346789999999
Q ss_pred eEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCe
Q 037878 837 DIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDL 915 (2280)
Q Consensus 837 ~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~ 915 (2280)
+++|+|++.+ ..++.|++|||+|+|++++.||+++++.+++.|. +|||+|||+++++ ||.++|+||+||+
T Consensus 397 ~v~v~d~~~~-~~~~~g~~Gel~v~g~~v~~gY~~~~~~~~~~~~--------dg~~~TGDl~~~~~~g~l~i~GR~~d~ 467 (567)
T PRK06178 397 EFKICDFETG-ELLPLGAEGEIVVRTPSLLKGYWNKPEATAEALR--------DGWLHTGDIGKIDEQGFLHYLGRRKEM 467 (567)
T ss_pred EEEEEcCCCC-CcCCCCCceEEEEECCcccccccCChhhhhhccc--------CCceeecceEEEecCCeEEEEeccccc
Confidence 9999997654 4457999999999999999999999999988774 3799999999996 9999999999999
Q ss_pred EEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHH
Q 037878 916 IIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRV 994 (2280)
Q Consensus 916 IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l 994 (2280)
||++|++|+|.|||+++.++++|.+ ++|++.+++..+ +....++ ...++.. ..+++.+.+++++
T Consensus 468 i~~~G~~i~~~eiE~~l~~~~~v~~---~~v~~~~~~~~g----------~~~~~~v--~~~~~~~~~~~~l~~~~~~~l 532 (567)
T PRK06178 468 LKVNGMSVFPSEVEALLGQHPAVLG---SAVVGRPDPDKG----------QVPVAFV--QLKPGADLTAAALQAWCRENM 532 (567)
T ss_pred EEECCEEECHHHHHHHHHhCCCeeE---EEEEcCcCcccC----------cceEEEE--EeCCCCcCCHHHHHHHHHhcC
Confidence 9999999999999999999999875 788887665322 1222222 2222222 2345666676666
Q ss_pred HHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 995 VEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 995 ~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
.. +++|. +..++++|+|++||++|++|++++.+
T Consensus 533 ~~-~~~p~----i~~v~~iP~t~~GKv~r~~l~~~~~~ 565 (567)
T PRK06178 533 AV-YKVPE----IRIVDALPMTATGKVRKQDLQALAEE 565 (567)
T ss_pred cc-cCCce----EEEeccCCCCCccceeHHHHHHHHHh
Confidence 53 45552 33458999999999999999988754
No 113
>cd08150 catalase_like Catalase-like heme-binding proteins and protein domains. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity.
Probab=100.00 E-value=3.7e-51 Score=490.76 Aligned_cols=273 Identities=24% Similarity=0.339 Sum_probs=238.4
Q ss_pred cccccccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCCcccccccccEEEeeccCCCCCCcceeeec
Q 037878 1713 KSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADDDARIDARGAAIRIFSDLNGNTSSLLDLTL 1792 (2280)
Q Consensus 1713 ~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~D~~~~~rG~Aik~~~~~~~~~~~~~D~~~ 1792 (2280)
++|.+||||.|++|+|+|++++++++++++|++|++|||++||||++| .+|+.+|+|||||||++.+ ++++|||+|
T Consensus 1 g~R~~Hakg~~a~G~F~v~~~~~~~~~~~~f~~~~~~pv~~RfS~~~g-~~D~~~~~RG~AiKf~~~~---~~~~~D~v~ 76 (283)
T cd08150 1 GLRGQHFQGTCAFGTFEVLADLKERLRVGLFAEGKVYPAYIRFSNGAG-IDDTKPDIRGFAIKFTGVA---DAGTLDFVL 76 (283)
T ss_pred CcCcccCCeeeEEEEEEEcCCcchhhhcccccCCCeeEEEEEeCCCCC-CcccCCCCceEEEEEEecC---CCceEeEEE
Confidence 479999999999999999999999999999999999999999999998 7799999999999998752 467899999
Q ss_pred ccccccccCChhhHHHHHhhccchh---------hhhhccCcchhhhhh-hcccCCCccccceeeeeeeEEEEEeCCcEE
Q 037878 1793 KTGNAFYARTIGDFATWLVCGLAAR---------EEHVKRVPHIRDAVW-KSLRLSDSYAEMHYYSNICRLFRFTDGQEM 1862 (2280)
Q Consensus 1793 ~n~p~f~~~~~~~f~~~~~~~~~~~---------~~~~~~~~~~~~~~~-~~~~~p~s~~~~~y~s~~~~~~~~~~g~~~ 1862 (2280)
||+|+|++++.++|.+++++..+.+ +.++..+|.....+. ...+.|.||++++|||+|+|+|+|++|+.+
T Consensus 77 ~n~pvF~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~p~s~~~~~y~s~~~f~f~~~~gk~~ 156 (283)
T cd08150 77 NNTPVFFIRNTSDYEDFVAEFARSARGEPPLDFIAWYVEKRPEDLPNLLGARSQVPDSYAAARYFSQVTFAFINGAGKYR 156 (283)
T ss_pred eCCCcCccCCHHHHHHHHHhccCCccCCCChHHHHHHHHhChhHHHHHHHHhCCCCCCccccceEeeeeEEEeccCCEEE
Confidence 9999999999999999987764322 355666664443322 222789999999999999999999999999
Q ss_pred EEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCCCccccccc
Q 037878 1863 YVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIPQDEAMQDI 1942 (2280)
Q Consensus 1863 ~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~d~~~~~~~ 1942 (2280)
||||+++|.+|...++.++ .+.+++|||+++|.+||+++ +++|+|+||+++++|.||++
T Consensus 157 ~vr~~~~P~~g~~~l~~~~------------------~~~~~~d~L~~~l~~rl~~~-~~~~~l~vQl~~~~d~~~i~-- 215 (283)
T cd08150 157 VVRSKDNPVDGIPSLEDHE------------------LEARPPDYLREELTERLQRG-PVVYDFRIQLNDDTDATTID-- 215 (283)
T ss_pred EEEEEecccCCCcccchhh------------------hcCCCcCHHHHHHHHHHHhC-CceEEEEEEEccccccCCCC--
Confidence 9999999977766554432 23357899999999999997 69999999999999986655
Q ss_pred cccCCCCCCCCCCCceeeEEEEecCCCChhhhccccccCCcCCCccccccCCCcccccccccchhhHHHhhhHhhc
Q 037878 1943 ALDCTKPWDEAEYPYIDVGEISIDQNLSTEESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEICQHLRN 2018 (2280)
Q Consensus 1943 ~~D~t~~W~~~~~p~~~vg~l~i~~~~~~~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~s~~~R~ 2018 (2280)
|+||+|||+ +|+++||+|+|++++.+++||+++|||.+.++||++++ |+.||+|+|+.+|.+|+++|+
T Consensus 216 --D~t~~Wpe~-~p~~~vg~l~i~~~~~~~~~~~~~f~p~~~~~gi~~~~-----d~g~i~~~R~~~Y~~S~~~R~ 283 (283)
T cd08150 216 --NPTILWPTE-HPVEAVAKITIPPPTFTAAQEAFAFNPFTPWHGLLETN-----DLGPILEVRRRVYTSSQGLRH 283 (283)
T ss_pred --CCCcCCCCC-CCceEEEEEEECCCCCcHHHHHHhcCCCCCCCccCCCC-----CchHHHHHHHHHHHHHHHhhC
Confidence 999999999 99999999999998777999999999999999999998 222999999999999999996
No 114
>PLN02479 acetate-CoA ligase
Probab=100.00 E-value=9.5e-49 Score=529.37 Aligned_cols=501 Identities=18% Similarity=0.181 Sum_probs=360.7
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
+....+++.+.. +|+++|+.+.. +.+||+||.++++++|+.|.+. |+++||+|+++++|+++++++++|
T Consensus 21 ~~~~~~~~~~~~--~p~~~a~~~~~------~~~ty~eL~~~~~~lA~~L~~~---g~~~gd~V~i~~~n~~~~~~~~la 89 (567)
T PLN02479 21 TPLWFLERAAVV--HPTRKSVVHGS------VRYTWAQTYQRCRRLASALAKR---SIGPGSTVAVIAPNIPAMYEAHFG 89 (567)
T ss_pred CHHHHHHHHHhh--CCCceEEEECC------ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCcHHHHHHHHH
Confidence 466777777765 48999987521 4799999999999999999998 899999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC-----C---C-CCCC-cccccccc----
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG-----S---W-PNLP-WLHTDSWV---- 615 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~-----~---~-~~~~-~~~~~~~~---- 615 (2280)
|+++|++++|+++..+.++ +.+++++++++.++++....+..... . . ...+ .+......
T Consensus 90 ~~~~G~v~v~l~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (567)
T PLN02479 90 VPMAGAVVNCVNIRLNAPT-------IAFLLEHSKSEVVMVDQEFFTLAEEALKILAEKKKSSFKPPLLIVIGDPTCDPK 162 (567)
T ss_pred HHhCCcEEEEeccccCHHH-------HHHHHhhcCceEEEEchhhhhHHHHHHHHHhhcccccCCCceEEEecCCcCCcc
Confidence 9999999999999998887 88999999999999876543211100 0 0 0000 00000000
Q ss_pred -------cc---ccccccc--cc-cccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEE
Q 037878 616 -------KN---SKNLLAE--NV-VCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSW 682 (2280)
Q Consensus 616 -------~~---~~~~~~~--~~-~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~ 682 (2280)
.. ..+.... .. ........+++++|+|||||||.||||++||+++..........+++..+++.+..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~yTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~~ 242 (567)
T PLN02479 163 SLQYALGKGAIEYEKFLETGDPEFAWKPPADEWQSIALGYTSGTTASPKGVVLHHRGAYLMALSNALIWGMNEGAVYLWT 242 (567)
T ss_pred ccccccccCcccHHHHHhccccccccCCCCCcccceEEEECCCCCCCCcEEEeccHHHHHHHHHHHhhcCCCCCCEEEEe
Confidence 00 0000000 00 00112234577889999999999999999999987766666667788899999999
Q ss_pred cCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCcc
Q 037878 683 LPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMK 762 (2280)
Q Consensus 683 ~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr 762 (2280)
+|++|.+++...+...+..|.++++.. .++..+++.++++++|++..+|.++..+.+...... ..+++++|
T Consensus 243 ~p~~h~~~~~~~~~~~~~~g~~~~~~~-----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~----~~~~~~l~ 313 (567)
T PLN02479 243 LPMFHCNGWCFTWTLAALCGTNICLRQ-----VTAKAIYSAIANYGVTHFCAAPVVLNTIVNAPKSET----ILPLPRVV 313 (567)
T ss_pred cchhhhhhHHHHHHHHhhcCceEeccC-----CCHHHHHHHHHHcCCeEEEecHHHHHHHHhhhhhcc----ccccccee
Confidence 999999997665555667776655432 289999999999999999999999998876533211 12578899
Q ss_pred EEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCC-ceeeccccCCCCCce-EEE
Q 037878 763 FLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQG-RVCCGYVDQNDPDVD-IRI 840 (2280)
Q Consensus 763 ~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g-~~~~g~vG~p~pg~~-v~I 840 (2280)
.++++|+++++++.++|.+. +..+++.||+||++..++............... ....+.+|.+.++++ ++|
T Consensus 314 ~~~~~G~~~~~~~~~~~~~~-------~~~~~~~yG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~i 386 (567)
T PLN02479 314 HVMTAGAAPPPSVLFAMSEK-------GFRVTHTYGLSETYGPSTVCAWKPEWDSLPPEEQARLNARQGVRYIGLEGLDV 386 (567)
T ss_pred EEEEcCCCCCHHHHHHHHhc-------CCceecccccccccccccceeccccccccCcccccccccccCCCcCCcCceeE
Confidence 99999999999999888753 457999999999865433221100000000000 111235677888876 899
Q ss_pred EcCCCCcccCCCC-CeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE
Q 037878 841 VNPETSEEIGEPG-KEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV 918 (2280)
Q Consensus 841 vd~~~~~~~~p~G-~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi 918 (2280)
+|++++..+.+.| ++|||+++|++++.|||++|+.|+++|. ++||||||+++++ ||.++|+||.||+||+
T Consensus 387 ~d~~~~~~~~~~g~~~GEl~v~g~~~~~GY~~~~~~t~~~~~--------~g~~~TGDl~~~~~~g~l~~~GR~~d~i~~ 458 (567)
T PLN02479 387 VDTKTMKPVPADGKTMGEIVMRGNMVMKGYLKNPKANEEAFA--------NGWFHSGDLGVKHPDGYIEIKDRSKDIIIS 458 (567)
T ss_pred EcCCCCcccCCCCCCceEEEEeccchhhhhhcCcccccchhc--------CCceecceeEEEcCCccEEEeccccceEEe
Confidence 9976544442233 6799999999999999999999999985 3799999999997 9999999999999999
Q ss_pred CCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC------CCHHHHHHHHH
Q 037878 919 AGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP------VDKDVIENIKT 992 (2280)
Q Consensus 919 ~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~------~~~~l~~~l~~ 992 (2280)
+|+||+|.|||++|.+||.|.+ ++|++.+++..+ ....+++.. ..+.. ..+++.+.+++
T Consensus 459 ~G~~v~~~eIE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v~~--~~~~~~~~~~~~~~~l~~~~~~ 523 (567)
T PLN02479 459 GGENISSLEVENVVYTHPAVLE---ASVVARPDERWG----------ESPCAFVTL--KPGVDKSDEAALAEDIMKFCRE 523 (567)
T ss_pred CCEEEcHHHHHHHHHhCcccce---eeEEeccchhcC----------ceeEEEEEe--cCcccccchhhhHHHHHHHHHh
Confidence 9999999999999999999875 888887654321 122222222 22211 11344555555
Q ss_pred HHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 993 RVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 993 ~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+|+. ++.| ..+.. ++||+|++||++|++|++++.+
T Consensus 524 ~l~~-~~~P---~~~~~-~~iP~t~~gKv~r~~L~~~~~~ 558 (567)
T PLN02479 524 RLPA-YWVP---KSVVF-GPLPKTATGKIQKHVLRAKAKE 558 (567)
T ss_pred hccc-ccCC---ceEEe-ccCCCCCccCeeHHHHHHHHHh
Confidence 5543 3333 33333 6799999999999999887544
No 115
>TIGR03205 pimA dicarboxylate--CoA ligase PimA. PimA, a member of a large family of acyl-CoA ligases, is found in a characteristic operon pimFABCDE for the metabolism of pimelate and related compounds. It is found, so far, in Bradyrhizobium japonicum and several strains of Rhodopseudomonas palustris. PimA from R. palustris was shown to be active as a CoA ligase for C(7) to C(14) dicarboxylates and fatty acids.
Probab=100.00 E-value=7.9e-49 Score=528.13 Aligned_cols=490 Identities=24% Similarity=0.328 Sum_probs=365.7
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.++++++.. |+++|+.+.+ +.+||.||.++++++|+.|.+. |+++||+|+++++|++++++++
T Consensus 20 ~~~~~~~~~~~~~~~--p~~~a~~~~~------~~~ty~el~~~~~~~a~~L~~~---gi~~g~~V~i~~~~~~~~~~~~ 88 (541)
T TIGR03205 20 RGTLPDLLSKAAADY--GPRPALEFRD------RPITYTELEAMAETAAAALLRA---GYGKDASVALYLGNTPDHPINF 88 (541)
T ss_pred CCCHHHHHHHHHHHc--CCCceEEECC------cEeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCChHHHHHH
Confidence 447888998887764 8899987532 4799999999999999999998 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccc--hhh----ccCCCCCCCccccccc-------
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYH--SAV----RVGSWPNLPWLHTDSW------- 614 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~--~~~----~~~~~~~~~~~~~~~~------- 614 (2280)
|||+++|++++|+++..+.++ +.+++++++++.++++.... ... .............+..
T Consensus 89 la~~~~G~~~v~l~~~~~~~~-------l~~~i~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (541)
T TIGR03205 89 FGALKAGARVVHLSPLDGERA-------LSHKLSDSGARLLITSDLAALLPMALKFLEKGLLDRLIVCEDDNWGKVGTPQ 161 (541)
T ss_pred HHHHhcCeEEEecCCCCCHHH-------HHHHHhhcCceEEEEeCchhhhHHHHHhhhcccceEEEEecccccccccccc
Confidence 999999999999999998887 88999999999999875211 000 0000000000000000
Q ss_pred ---ccc-----cccc--ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH-----cCCCCCcEE
Q 037878 615 ---VKN-----SKNL--LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR-----YKSTSKTVL 679 (2280)
Q Consensus 615 ---~~~-----~~~~--~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~-----~~~~~~d~~ 679 (2280)
... .... ............++++++++|||||||.||||+++|+++.+........ ......+++
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~l~~~~~~~~~~~~~~~~~~~~~~~~ 241 (541)
T TIGR03205 162 APIPADPRIVTYADFVKGAAAPAEWPAVTPDDVALLQYTGGTTGLPKGAMLTHGNLTSAVSIYDVWGKPSRATRGDVERV 241 (541)
T ss_pred cccCCCcccccHHHHHhcCCCCCCCCCCCccCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHhhcccccccCCCCceE
Confidence 000 0000 0000111223567899999999999999999999999987655432111 112345789
Q ss_pred EEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCC
Q 037878 680 VSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLS 759 (2280)
Q Consensus 680 l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~ 759 (2280)
++.+|++|.+++...++.++..|+++++... .++..+++.++++++|++..+|+++..+.+... ....+++
T Consensus 242 l~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~-----~~~~~~~ 312 (541)
T TIGR03205 242 ICVLPLFHIYALTVILLRSLRRGDLISLHQR----FDVAAVFRDIEEKRATVFPGVPTMWIALANDPS-----LEKRDLS 312 (541)
T ss_pred EEeccHHHHHHHHHHHHHHHhcCCEEEecCC----CCHHHHHHHHHHcCCeEeechHHHHHHHHhCcc-----ccccCcc
Confidence 9999999999988888999999998877642 389999999999999999999999887764211 1124578
Q ss_pred CccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEE
Q 037878 760 SMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIR 839 (2280)
Q Consensus 760 ~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~ 839 (2280)
++|.+++||+++++++.+++.+.+ +..+++.||+||++..++...... ....+++|.|+++++++
T Consensus 313 ~l~~i~~gg~~~~~~~~~~~~~~~------~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~G~~~~~~~~~ 377 (541)
T TIGR03205 313 SLATIGSGGAPLPVEVANFFERKT------GLKLKSGWGMTETCSPGTGHPPEG---------PDKPGSIGLMLPGIELD 377 (541)
T ss_pred ccceEEEccccCCHHHHHHHHHHh------CCCeecccccccCCcccccCCCCC---------CCCCCCcceeccCceeE
Confidence 999999999999999998887753 467999999999987655432110 11235789999999999
Q ss_pred EEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE
Q 037878 840 IVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV 918 (2280)
Q Consensus 840 Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi 918 (2280)
|++.+.....++.|+.|||+++|++++.||+|+|+.|++.|.. +||+|||+++++ ||.++++||.||+||+
T Consensus 378 v~~~d~~~~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~--------~~~~TGD~~~~~~~g~l~i~GR~~~~i~~ 449 (541)
T TIGR03205 378 VVSLDDPTKVLPPGEVGELRIRGPNVTRGYWNRPEESAEAFVG--------DRFLTGDIGYMDTDGYFFLVDRKKDMIIS 449 (541)
T ss_pred EEecCCCCccCCCCCeeEEEEecCCccccccCChhhhHhhhcc--------CCcccCceEEEcCCceEEEEccccCeEEE
Confidence 8753222245578999999999999999999999999998853 689999999996 9999999999999999
Q ss_pred CCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC--CCCHHHHHHHHHHHHH
Q 037878 919 AGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK--PVDKDVIENIKTRVVE 996 (2280)
Q Consensus 919 ~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~--~~~~~l~~~l~~~l~~ 996 (2280)
+|+||+|.|||+++.++++|.+ ++|++++++..+ +...+++ ....+. ....++.+.++++|..
T Consensus 450 ~G~~i~~~eIE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v--~~~~~~~~~~~~~l~~~~~~~l~~ 514 (541)
T TIGR03205 450 GGFNVYPQMIEQAIYEHPGVQE---VIVIGIPDQYRG----------EAAKAFV--KLRPGAKPFSLDELRAFLAGKLGK 514 (541)
T ss_pred CCEEECHHHHHHHHHhCCCeee---EEEEecCCcccC----------ceEEEEE--EECCCCCcCCHHHHHHHHHhhccc
Confidence 9999999999999999998865 888888765322 1222222 222221 1224566666666654
Q ss_pred hcCcceeEEEEecCCCccCCCCcccchHHH
Q 037878 997 EHGVTVASVKLIKPRTMSKTTSGKIKRFEC 1026 (2280)
Q Consensus 997 ~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L 1026 (2280)
+++| ..+..+++||+|++||++|++|
T Consensus 515 -~~~P---~~i~~~~~iP~t~~gK~~r~~l 540 (541)
T TIGR03205 515 -HELP---VAVEFVDELPRTPVGKLSRHEL 540 (541)
T ss_pred -ccCC---cEEEEeccCCCCcccceeHhhc
Confidence 3444 4555569999999999999874
No 116
>PRK06018 putative acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.2e-49 Score=527.31 Aligned_cols=506 Identities=17% Similarity=0.231 Sum_probs=372.6
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++.+++ +|+++++.... ++. .+++||+||.++++++|++|.+. |+++||+|+++++|++++++++
T Consensus 9 ~~~~~~~~~~~a~~--~~~~~~~~~~~-~~~-~~~~Ty~el~~~v~~la~~L~~~---g~~~gd~v~i~~~~~~~~~~~~ 81 (542)
T PRK06018 9 PLLCHRIIDHAARI--HGNREVVTRSV-EGP-IVRTTYAQIHDRALKVSQALDRD---GIKLGDRVATIAWNTWRHLEAW 81 (542)
T ss_pred CCCHHHHHHHHHHh--CCCceEEEeec-cCC-ceEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCchHHHHHH
Confidence 34788999999887 48999987432 222 36899999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCccc-ccccc--cc-----
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLH-TDSWV--KN----- 617 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~-~~~~~--~~----- 617 (2280)
|||+++|++++|+++.++.++ +..+++.++++.++++.+....+... ..+....+. ..+.. ..
T Consensus 82 la~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (542)
T PRK06018 82 YGIMGIGAICHTVNPRLFPEQ-------IAWIINHAEDRVVITDLTFVPILEKIADKLPSVERYVVLTDAAHMPQTTLKN 154 (542)
T ss_pred HHHHhcCeEeeccccccCHHH-------HHHHHhccCCCEEEEccccHHHHHHHHhhCCCccEEEEecccccccccCccc
Confidence 999999999999999999888 88999999999999987654332210 011111000 00000 00
Q ss_pred ---ccccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHH-HH-HHHHHHHcCCCCCcEEEEEcCchhhhh
Q 037878 618 ---SKNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLI-HN-VKLMRKRYKSTSKTVLVSWLPQYHDMG 690 (2280)
Q Consensus 618 ---~~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~-~~-~~~~~~~~~~~~~d~~l~~~pl~h~~g 690 (2280)
..+.. ...........++++++|+|||||||.||||++||++.+ +. .......+++..+|+++.++|++|..+
T Consensus 155 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~p~~h~~~ 234 (542)
T PRK06018 155 AVAYEEWIAEADGDFAWKTFDENTAAGMCYTSGTTGDPKGVLYSHRSNVLHALMANNGDALGTSAADTMLPVVPLFHANS 234 (542)
T ss_pred cccHHHHhccCCcccCcccCCccceeeEEecCCCCCCCcEEEEechhHHHHHHHHhhhhhcCCCCCCEEEEecCHHHHhh
Confidence 00000 000011123456889999999999999999999999743 22 233345677889999999999999988
Q ss_pred HHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCC
Q 037878 691 LIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEP 770 (2280)
Q Consensus 691 l~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~ 770 (2280)
+. ..+.++..|+++++... . .++..+++.++++++|++.++|+.+..+.+...... .+++++|.+++|||+
T Consensus 235 ~~-~~~~~~~~g~~~v~~~~-~--~~~~~~~~~l~~~~~t~~~~~p~~~~~l~~~~~~~~-----~~~~~lr~~~~~G~~ 305 (542)
T PRK06018 235 WG-IAFSAPSMGTKLVMPGA-K--LDGASVYELLDTEKVTFTAGVPTVWLMLLQYMEKEG-----LKLPHLKMVVCGGSA 305 (542)
T ss_pred hH-HHHhhhhcCceEEccCc-C--CCHHHHHHHHHhcCCceeecCcHHHHHHHhcccccC-----CCcccceEEEEcCCC
Confidence 74 44677889998887532 2 378899999999999999999999988876543221 457899999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCC-ceeecCCCceeeccccCCCCCceEEEEcCCCCccc
Q 037878 771 VRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGK-PIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEI 849 (2280)
Q Consensus 771 l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~-~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~ 849 (2280)
+++++.++|.+ + ++.+++.||+||++.+++....... ............+++|+|.++++++|+|+++. .+
T Consensus 306 l~~~~~~~~~~-~------~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~g~~i~v~d~~~~-~~ 377 (542)
T PRK06018 306 MPRSMIKAFED-M------GVEVRHAWGMTEMSPLGTLAALKPPFSKLPGDARLDVLQKQGYPPFGVEMKITDDAGK-EL 377 (542)
T ss_pred CCHHHHHHHHH-h------CCCeEeeecccccCcccccccCccccccCCchhhhhccccCCCCCCCcEEEEECCCCC-CC
Confidence 99999999987 4 4579999999999876543221110 00000000112357899999999999998753 33
Q ss_pred CCC-CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHH
Q 037878 850 GEP-GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSAD 927 (2280)
Q Consensus 850 ~p~-G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~E 927 (2280)
... +..|||+++|++++.||+++. .+.+ ..++||+|||+++++ ||.++|+||.||+||++|++|++.|
T Consensus 378 ~~~~~~~Gel~i~g~~~~~gy~~~~---~~~~-------~~~~~~~TGDl~~~~~~g~~~~~GR~~d~i~~~G~~v~~~e 447 (542)
T PRK06018 378 PWDGKTFGRLKVRGPAVAAAYYRVD---GEIL-------DDDGFFDTGDVATIDAYGYMRITDRSKDVIKSGGEWISSID 447 (542)
T ss_pred CCCCCceeEEEEecCCcchhhhcCc---ccEe-------cCCcEEEcCCEEEEcCCccEEEEecCCCeEEECCEEECHHH
Confidence 222 368999999999999999832 2222 235899999999996 9999999999999999999999999
Q ss_pred HHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcceeEEE
Q 037878 928 VEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTVASVK 1006 (2280)
Q Consensus 928 IE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~ 1006 (2280)
||+++.++|+|.+ |+|++.+++..+ +...+++. ..++... .+++.+.+++++.. ++.| ..
T Consensus 448 IE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v~--~~~~~~~~~~~l~~~~~~~l~~-~~~P---~~ 508 (542)
T PRK06018 448 LENLAVGHPKVAE---AAVIGVYHPKWD----------ERPLLIVQ--LKPGETATREEILKYMDGKIAK-WWMP---DD 508 (542)
T ss_pred HHHHHHhCCccee---EEEEeccCCCcC----------ceeEEEEE--eCCCCCCCHHHHHHHHHhhCcc-ccCC---cE
Confidence 9999999999875 889988775432 22222222 2233222 25667777776654 4444 34
Q ss_pred EecCCCccCCCCcccchHHHHHHhhcC
Q 037878 1007 LIKPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1007 lv~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
+..+++||+|++||+||++|++++.+.
T Consensus 509 i~~v~~iP~t~~GKi~r~~L~~~~~~~ 535 (542)
T PRK06018 509 VAFVDAIPHTATGKILKTALREQFKDY 535 (542)
T ss_pred EEEeccCCCCCcchhhHHHHHHHHhcc
Confidence 445599999999999999999998764
No 117
>PRK06814 acylglycerophosphoethanolamine acyltransferase; Provisional
Probab=100.00 E-value=5.5e-49 Score=574.70 Aligned_cols=489 Identities=21% Similarity=0.286 Sum_probs=369.2
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.+++.+++. .+++.++... ++ +++||+||+++++++|+.|+ . |+++||+|+++++|++++++++
T Consensus 630 ~~~~~~~l~~~~~~~-~~~~~ai~~~--~~---~~~Ty~el~~~~~~lA~~L~-~---g~~~gd~V~i~~~n~~~~~~~~ 699 (1140)
T PRK06814 630 DRTLFEALIEAAKIH-GFKKLAVEDP--VN---GPLTYRKLLTGAFVLGRKLK-K---NTPPGENVGVMLPNANGAAVTF 699 (1140)
T ss_pred cCCHHHHHHHHHHHc-CCCCeEeECC--CC---CccCHHHHHHHHHHHHHHHH-h---cCCCCCeEEEEcCCchHHHHHH
Confidence 345666776666553 2466776431 11 57999999999999999996 4 7999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC----CC-CCCCccccccccccc----
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG----SW-PNLPWLHTDSWVKNS---- 618 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~----~~-~~~~~~~~~~~~~~~---- 618 (2280)
+||+++|++++|+|+..+.++ +.+++++++++.++++....+..... .. .....+..++.....
T Consensus 700 la~~~~G~v~v~l~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~ 772 (1140)
T PRK06814 700 FALQSAGRVPAMINFSAGIAN-------ILSACKAAQVKTVLTSRAFIEKARLGPLIEALEFGIRIIYLEDVRAQIGLAD 772 (1140)
T ss_pred HHHHHCCCEEEEcCCCCCHHH-------HHHHHHHcCCCEEEecHHHHhhhcchhHHHHhccCceEEEehHhhccCChHH
Confidence 999999999999999999888 88999999999999986543211100 00 011111111110000
Q ss_pred --cccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHH
Q 037878 619 --KNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 619 --~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
.... ..+....+...++|+++|+|||||||.||||++||+++.+.+......++.+++|++++++|++|.+++...
T Consensus 773 ~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g~~~~ 852 (1140)
T PRK06814 773 KIKGLLAGRFPLVYFCNRDPDDPAVILFTSGSEGTPKGVVLSHRNLLANRAQVAARIDFSPEDKVFNALPVFHSFGLTGG 852 (1140)
T ss_pred HHHHHhhccCCccccCCCCCCCcEEEEECCCccCCCcEEEecHHHHHHHHHHHHHhhCCCCcCEEEEecchHHHHHHHHH
Confidence 0000 000001113578999999999999999999999999999999888888999999999999999999999888
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHH
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQT 774 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~ 774 (2280)
++.++..|+++++.+.. .++..+.+.++++++|++..+|++++.+.+.. ...+++++|.+++|||+++++
T Consensus 853 ~~~~l~~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~-------~~~~~~~lr~v~~gg~~l~~~ 922 (1140)
T PRK06814 853 LVLPLLSGVKVFLYPSP---LHYRIIPELIYDTNATILFGTDTFLNGYARYA-------HPYDFRSLRYVFAGAEKVKEE 922 (1140)
T ss_pred HHHHHHcCCEEEEecCc---ccHHHHHHHHHhcCCEEEEecHHHHHHHHhhc-------ccccccceeEEEEcCCcCCHH
Confidence 89999999999886531 25677889999999999999999988776531 125678999999999999999
Q ss_pred HHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCC
Q 037878 775 TVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGK 854 (2280)
Q Consensus 775 l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~ 854 (2280)
+.++|.+.+ +++++|.||+||++..++..... ....+++|+|+|++++++.|.++ .|+
T Consensus 923 ~~~~~~~~~------~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~vG~p~~g~~~~~~~~~~------~~~ 980 (1140)
T PRK06814 923 TRQTWMEKF------GIRILEGYGVTETAPVIALNTPM----------HNKAGTVGRLLPGIEYRLEPVPG------IDE 980 (1140)
T ss_pred HHHHHHHHh------CCcEEeccccccccceEEecCCC----------CCCCCcCCccCCCCeEEEeecCC------CCC
Confidence 999998864 46799999999998765543211 11246789999999999987432 467
Q ss_pred eeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHH
Q 037878 855 EGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVE 933 (2280)
Q Consensus 855 ~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~ 933 (2280)
.|||+++|++++.||+++++.+. +. ...+|||+|||+++++ ||.++|+||.||+||++|+||+|.|||++|.
T Consensus 981 ~Gel~v~g~~~~~gY~~~~~~~~--~~-----~~~~g~~~TGDl~~~d~dG~l~~~GR~~d~i~~~G~~v~~~eIE~~l~ 1053 (1140)
T PRK06814 981 GGRLFVRGPNVMLGYLRAENPGV--LE-----PPADGWYDTGDIVTIDEEGFITIKGRAKRFAKIAGEMISLAAVEELAA 1053 (1140)
T ss_pred ceEEEEeCCCcchhhcCCCCCCc--cc-----cCCCCeEecCCEEEECCCCeEEEEecccCeeeeCCEEECHHHHHHHHH
Confidence 89999999999999998765321 11 1246899999999997 9999999999999999999999999999999
Q ss_pred hccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCc
Q 037878 934 SSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTM 1013 (2280)
Q Consensus 934 ~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~l 1013 (2280)
+|+++.+ ++|++++++..+ +. ++++.. ......+++.+.++++..+.+++| ..++.++++
T Consensus 1054 ~~~~v~~---~~vv~~~~~~~g----------~~--~~~~~~--~~~~~~~~l~~~~~~~~l~~~~~P---~~i~~v~~l 1113 (1140)
T PRK06814 1054 ELWPDAL---HAAVSIPDARKG----------ER--IILLTT--ASDATRAAFLAHAKAAGASELMVP---AEIITIDEI 1113 (1140)
T ss_pred hcCCccc---EEEEEcccCCCC----------ce--EEEEEc--CCCcCHHHHHHHHHHcCCCcccCC---cEEEEecCc
Confidence 9998865 888888776432 11 222221 122223455666665422235554 344555999
Q ss_pred cCCCCcccchHHHHHHhhc
Q 037878 1014 SKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1014 P~t~sGKvdR~~L~~~~~~ 1032 (2280)
|+|++||+||++|++...+
T Consensus 1114 P~t~~GKi~r~~L~~~~~~ 1132 (1140)
T PRK06814 1114 PLLGTGKIDYVAVTKLAEE 1132 (1140)
T ss_pred CCCCCCCCcHHHHHHHHHH
Confidence 9999999999999887544
No 118
>PRK08974 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=2.5e-48 Score=525.67 Aligned_cols=496 Identities=26% Similarity=0.389 Sum_probs=373.6
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLT-SRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~-~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
..++.++++.++++. |+++|+...+ +.+||.||.++++++|..|.+ + |+++||+|+++++|+++++++
T Consensus 22 ~~~l~~~l~~~a~~~--p~~~a~~~~~------~~lTy~~l~~~~~~la~~L~~~~---g~~~g~~V~i~~~~~~~~~~~ 90 (560)
T PRK08974 22 YQSLVDMFEQAVARY--ADQPAFINMG------EVMTFRKLEERSRAFAAYLQNGL---GLKKGDRVALMMPNLLQYPIA 90 (560)
T ss_pred cccHHHHHHHHHHhC--CCCceEEECC------ccccHHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCCHHHHHH
Confidence 356888998888764 7899987421 489999999999999999984 6 899999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC-CCCCCCcccc----ccc-------
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG-SWPNLPWLHT----DSW------- 614 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~-~~~~~~~~~~----~~~------- 614 (2280)
+|||+++|++++|+++..+.++ +.+++++++++.++++......+... .......+.. ...
T Consensus 91 ~lA~~~~G~~~v~l~~~~~~~~-------~~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (560)
T PRK08974 91 LFGILRAGMIVVNVNPLYTPRE-------LEHQLNDSGAKAIVIVSNFAHTLEKVVFKTPVKHVILTRMGDQLSTAKGTL 163 (560)
T ss_pred HHHHHHcCcEEeccCccCCHHH-------HHHHHHhcCceEEEEeccccHHHHHHhhhcCcceEEEeccccccccccccc
Confidence 9999999999999999999887 88999999999999875433221100 0000000000 000
Q ss_pred ----------------cccc---ccc---ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcC
Q 037878 615 ----------------VKNS---KNL---LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYK 672 (2280)
Q Consensus 615 ----------------~~~~---~~~---~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~ 672 (2280)
.... ... ............++++++|+|||||||.||||.++|+++..++......+.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~~t~~~l~~~~~~~~~~~~ 243 (560)
T PRK08974 164 VNFVVKYIKRLVPKYHLPDAISFRSALHKGRRMQYVKPELVPEDLAFLQYTGGTTGVAKGAMLTHRNMLANLEQAKAAYG 243 (560)
T ss_pred ccchhhhcccccccccCCCcccHHHHhhccCCCCCCCCCCCCCCeEEEEECCCCCCCCcEEEEchHHHHHHHHHHHHhhc
Confidence 0000 000 000001112246789999999999999999999999999887665444332
Q ss_pred ---CCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcc
Q 037878 673 ---STSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESS 749 (2280)
Q Consensus 673 ---~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~ 749 (2280)
...+++++.++|++|.+++....+..+..|+++++..+. .++..+++.++++++|.+..+|+++..+......
T Consensus 244 ~~~~~~~~~~~~~~p~~~~~~~~~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~- 319 (560)
T PRK08974 244 PLLHPGKELVVTALPLYHIFALTVNCLLFIELGGQNLLITNP---RDIPGFVKELKKYPFTAITGVNTLFNALLNNEEF- 319 (560)
T ss_pred cccCCCccEEEEeCcHHHHHHHHHHHHHHhhcCCeEEEecCc---cCHHHHHHHHHhcCcceEcCcHHHHHHHHhCcCc-
Confidence 345678889999999999877777788889887765432 3788899999999999999999999888753221
Q ss_pred cccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccc
Q 037878 750 KDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYV 829 (2280)
Q Consensus 750 ~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~v 829 (2280)
...+++++|.+++||+++++++.++|.+.+ ++.+++.||+||++.+++...... ....+++
T Consensus 320 ----~~~~~~~lr~~~~gg~~~~~~~~~~~~~~~------g~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~ 380 (560)
T PRK08974 320 ----QELDFSSLKLSVGGGMAVQQAVAERWVKLT------GQYLLEGYGLTECSPLVSVNPYDL---------DYYSGSI 380 (560)
T ss_pred ----ccCCccceeEEEecCccCCHHHHHHHHHHh------CCcEEeeecccccCceeeccCCCC---------cccCCcc
Confidence 124578999999999999999999998863 567999999999987665432211 1123578
Q ss_pred cCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEE
Q 037878 830 DQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFI 908 (2280)
Q Consensus 830 G~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~ 908 (2280)
|.|+|+++++|+|+++ ..++.|+.|||+|+|+.++.||+++++.+++.|. ++||+|||+++++ +|.+++
T Consensus 381 G~~~~~~~~~i~~~~~--~~~~~g~~Gel~v~g~~~~~gy~~~~~~~~~~~~--------~g~~~TGDl~~~~~~g~l~i 450 (560)
T PRK08974 381 GLPVPSTEIKLVDDDG--NEVPPGEPGELWVKGPQVMLGYWQRPEATDEVIK--------DGWLATGDIAVMDEEGFLRI 450 (560)
T ss_pred ccCcCCCEEEEECCCC--CCCCCCCceEEEEecCCcchhhcCChhhhhhhhh--------cCCcccCCEEEEcCCceEEE
Confidence 9999999999999864 3457999999999999999999999999998873 3799999999996 999999
Q ss_pred EecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHH
Q 037878 909 TGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIE 988 (2280)
Q Consensus 909 ~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~ 988 (2280)
+||+||+||++|++|+|.|||++|.++|+|.+ ++|++.+++..+ .....++. ..+.....+++.+
T Consensus 451 ~GR~~d~i~~~G~~i~~~~IE~~l~~~~~v~~---~~v~~~~~~~~g----------~~~~~~v~--~~~~~~~~~~l~~ 515 (560)
T PRK08974 451 VDRKKDMILVSGFNVYPNEIEDVVMLHPKVLE---VAAVGVPSEVSG----------EAVKIFVV--KKDPSLTEEELIT 515 (560)
T ss_pred EecccceEEeCCEEECHHHHHHHHHhCCCeeE---EEEEeeecCCcc----------eEEEEEEE--CCCCCCCHHHHHH
Confidence 99999999999999999999999999999865 788887665322 12222222 2222222245555
Q ss_pred HHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcC
Q 037878 989 NIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 989 ~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
.+++++.. + ..|..+..+++||+|.+||++|++|+++..++
T Consensus 516 ~l~~~l~~-~---~~P~~~~~~~~lP~t~~GK~~r~~l~~~~~~~ 556 (560)
T PRK08974 516 HCRRHLTG-Y---KVPKLVEFRDELPKSNVGKILRRELRDEARAK 556 (560)
T ss_pred HHHhhccc-c---cCCcEEEEhhhCCCCCCCcEeHHHHHHHHHhh
Confidence 55555543 3 34455556699999999999999998876543
No 119
>TIGR02262 benz_CoA_lig benzoate-CoA ligase family. Characterized members of this protein family include benzoate-CoA ligase, 4-hydroxybenzoate-CoA ligase, 2-aminobenzoate-CoA ligase, etc. Members are related to fatty acid and acetate CoA ligases.
Probab=100.00 E-value=1.4e-48 Score=521.98 Aligned_cols=491 Identities=23% Similarity=0.290 Sum_probs=367.1
Q ss_pred HHHHHHhh-ccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 471 LDGYLKHW-GTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 471 l~~~l~~~-a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
..++++++ ++. +|+++|+... + +.+||.||.++++++|+.|.+. |+++|++|+++++|+.+++++++|
T Consensus 6 ~~~~~~~~~~~~--~p~~~a~~~~--~----~~~ty~~l~~~~~~~a~~L~~~---g~~~g~~v~l~~~~~~~~~~~~~a 74 (508)
T TIGR02262 6 AEDLLDRNVVEG--RGGKTAFIDD--I----SSLSYGELEAQVRRLGAALRRL---GVKREERVLLLMLDGVDFPIAFLG 74 (508)
T ss_pred HHHHHHHHHhcc--cCCceEEEeC--C----ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHH
Confidence 34566655 443 4889988642 1 5799999999999999999988 899999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-ccccccccc---cccccc-
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTDSWVK---NSKNLL- 622 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~~~~~---~~~~~~- 622 (2280)
|+++|++++|+++..+.++ +.++++.++++.++++......+... ..+... .+....... ...+..
T Consensus 75 ~~~~G~~~v~l~~~~~~~~-------l~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (508)
T TIGR02262 75 AIRAGIVPVALNTLLTADD-------YAYMLEDSRARVVFVSGELLPVIKAALGKSPHLEHRVVVGRPEAGEVQLAELLA 147 (508)
T ss_pred HHHcCcEEeeccCCCCHHH-------HHHHHHhcCCeEEEEchhhHHHHHHHHhcCCCccEEEEeCCCCcccccHHHHhh
Confidence 9999999999999998887 88999999999999986544322110 011111 000000000 000000
Q ss_pred -cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHH-HHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 623 -AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKL-MRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 623 -~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~-~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
...........++++++|+|||||||.||||+++|+++...+.. ....++++.+|+++..+|++|++++...++.++.
T Consensus 148 ~~~~~~~~~~~~~~~~a~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~l~ 227 (508)
T TIGR02262 148 TESEQFKPAATQADDPAFWLYSSGSTGMPKGVVHTHSNPYWTAELYARNTLGIREDDVVFSAAKLFFAYGLGNALTFPMS 227 (508)
T ss_pred cCCCccCCCCCCCCCcEEEEeCCCCCCCCcEEEEechhHHHHHHHHhHHhcCCCCCCEEEEcCchHHHHHHHHHHHHHHH
Confidence 00011122345789999999999999999999999999887765 4566788999999999999999998778888999
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|++.++.++. .++..+++.++++++|++.++|.++..+...... .....+++|.+++||+++++++.+.|.
T Consensus 228 ~G~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~~~~~~~~~~~-----~~~~~~~l~~~~~~G~~l~~~~~~~~~ 299 (508)
T TIGR02262 228 VGATTVLMGER---PTPDAVFDRLRRHQPTIFYGVPTLYAAMLADPNL-----PAEDQVRLRLCTSAGEALPAEVGQRWQ 299 (508)
T ss_pred cCceEEEeCCC---CCHHHHHHHHHHHCCcEEecchHHHHHHhcCccc-----cccccccceeEEEcCCCCCHHHHHHHH
Confidence 99998887642 2789999999999999999999888766542111 113456899999999999999999999
Q ss_pred HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEE
Q 037878 781 ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWI 860 (2280)
Q Consensus 781 ~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i 860 (2280)
+.+ ++++++.||+||++.+++..... ....+++|.|++|++++|+|+++ ..++.|+.|||+|
T Consensus 300 ~~~------~~~v~~~YG~tE~~~~~~~~~~~----------~~~~~~~G~~~~g~~v~i~d~~~--~~~~~g~~Gel~i 361 (508)
T TIGR02262 300 ARF------GVDIVDGIGSTEMLHIFLSNLPG----------DVRYGTSGKPVPGYRLRLVGDGG--QDVAAGEPGELLI 361 (508)
T ss_pred HHh------CCchhhCccccccCceeecCCcc----------CCCCCCcCCCCCCcEEEEECCCC--CCCCCCCeeEEEE
Confidence 875 46799999999998755432111 11246789999999999999554 4457999999999
Q ss_pred cCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCc
Q 037878 861 SSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHI 939 (2280)
Q Consensus 861 ~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~ 939 (2280)
+|++++.||+++|+.+++.|. ++||+|||+++++ ||.++++||+||+||++|.+|+|.|||++|.++++|.
T Consensus 362 ~~~~~~~gY~~~~~~~~~~~~--------~~~~~TGD~~~~~~~g~~~~~gR~~d~i~~~G~~v~~~~ie~~l~~~~~v~ 433 (508)
T TIGR02262 362 SGPSSATMYWNNRAKTRDTFQ--------GEWTRSGDKYVRNDDGSYTYAGRTDDMLKVSGIYVSPFEIESALIQHPAVL 433 (508)
T ss_pred ecCccccccCCCHHHhHhhhh--------cCceeccceEEEcCCccEEEeccccceeeeCCEEECHHHHHHHHHhCCCee
Confidence 999999999999999998874 3899999999996 9999999999999999999999999999999999986
Q ss_pred CCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCc
Q 037878 940 RPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSG 1019 (2280)
Q Consensus 940 ~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sG 1019 (2280)
+ +++++.++... .....+++.. .++......+.+.+++.+...++....+..+..++++|+|++|
T Consensus 434 ~---~~~~~~~~~~~----------~~~~~~~v~~--~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~iP~t~~g 498 (508)
T TIGR02262 434 E---AAVVGVEDEDG----------LIKPKAFIVL--RPGQDIDTALETELKEHVKDRLAPYKYPRWIVFVDDLPKTATG 498 (508)
T ss_pred E---EEEEeccccCC----------CceeEEEEEe--CCCCccccccHHHHHHHHHHhcccCCCCceEEEecCCCCCCCC
Confidence 5 77777654321 1222222222 2221111122333444444333333334445556899999999
Q ss_pred ccchHHHHH
Q 037878 1020 KIKRFECLK 1028 (2280)
Q Consensus 1020 KvdR~~L~~ 1028 (2280)
|++|++|++
T Consensus 499 Ki~r~~l~~ 507 (508)
T TIGR02262 499 KIQRFKLRE 507 (508)
T ss_pred cEehhhccC
Confidence 999987653
No 120
>PRK07868 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.6e-48 Score=550.06 Aligned_cols=479 Identities=15% Similarity=0.117 Sum_probs=349.1
Q ss_pred CCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHH
Q 037878 466 PELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVD 545 (2280)
Q Consensus 466 ~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~v 545 (2280)
+...++.+++++++++ +|+++|+.+.+ +++||+||+++++++|+.|++. |+++||+|+|+++|++++++
T Consensus 444 ~~~~sl~~ll~~~a~~--~pd~~Al~~~~------~~lTY~eL~~ra~rlA~~L~~~---Gv~~Gd~VaI~~~n~~e~v~ 512 (994)
T PRK07868 444 HTRISLGRIIAEQARD--APKGEFLLFDG------RVHTYEAVNRRINNVVRGLIAV---GVRQGDRVGVLMETRPSALV 512 (994)
T ss_pred CCCccHHHHHHHHHHH--CCCCeEEEeCC------ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHH
Confidence 4556889999888876 48999997632 4799999999999999999998 99999999999999999999
Q ss_pred HHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccc------------
Q 037878 546 AFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDS------------ 613 (2280)
Q Consensus 546 a~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~------------ 613 (2280)
++|||+++|++++|++|. ++ +.++++++++++++++........... ...+..+.
T Consensus 513 a~lA~~~aGav~vpl~p~---~~-------l~~il~~s~~~~li~~~~~~~~~~~~~---~~iiv~~~~~~~~~~~~~~~ 579 (994)
T PRK07868 513 AIAALSRLGAVAVLMPPD---TD-------LAAAVRLGGVTEIITDPTNLEAARQLP---GRVLVLGGGESRDLDLPDDA 579 (994)
T ss_pred HHHHHHhcCCEEEEeCCc---hh-------HHHHHhccCCeEEEEChHHHHHHHhcC---ceEEEecCCccccccCCcch
Confidence 999999999999999984 33 778999999999999765433221100 00000000
Q ss_pred -ccccccccccccc-c---ccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhh
Q 037878 614 -WVKNSKNLLAENV-V---CFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHD 688 (2280)
Q Consensus 614 -~~~~~~~~~~~~~-~---~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~ 688 (2280)
............. . ...+..++|+|||+|| ||||+||++.++|.+...........++++++|++++++|++|+
T Consensus 580 ~~~~~~~~~~~~~~~~~~~~~~~~~~dd~a~IiyT-gStgtpKpk~vt~~~~~~~~~~~~~~~~l~~~d~~L~~~Pl~h~ 658 (994)
T PRK07868 580 DVIDMEKIDPDAVELPGWYRPNPGLARDLAFIAFS-TAGGELVAKQITNYRWALSAFGTASAAALDRRDTVYCLTPLHHE 658 (994)
T ss_pred hhhhhhhcCcccccCCcccCCCCCCCCccEEEEEe-CCCCCcCcEEEehHHHHHHHHhhhhhcCCCCCCeEEEecChHHH
Confidence 0000000000000 0 0012236899999999 57888888888887765555555566788999999999999999
Q ss_pred hhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEec
Q 037878 689 MGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAA 768 (2280)
Q Consensus 689 ~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gG 768 (2280)
+++...++.++.+|+++++.+ .+ +|..+++.++++++|++..+|+++..+++... ....+++++|.++ |
T Consensus 659 ~gl~~~l~~~l~gG~~vvl~~--~~--~~~~~~~~I~~~~vT~~~~~Ps~l~~L~~~~~-----~~~~~~~slr~~~--g 727 (994)
T PRK07868 659 SGLLVSLGGAVVGGSRIALSR--GL--DPDRFVQEVRQYGVTVVSYTWAMLREVVDDPA-----FVLHGNHPVRLFI--G 727 (994)
T ss_pred hHHHHHHHHHhccceEEEecC--CC--CHHHHHHHHHHhCCcEEEeHHHHHHHHHhCcC-----CccCCCCceEEEe--c
Confidence 998766667777776666543 23 89999999999999999999999988875321 1124577899876 3
Q ss_pred CCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCc-eEEEE------
Q 037878 769 EPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDV-DIRIV------ 841 (2280)
Q Consensus 769 e~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~-~v~Iv------ 841 (2280)
+.+++++.++|.+.+ +.+.++|.||+||++++++. .. ....+++|+|+||+ +++|.
T Consensus 728 ~gl~~~l~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~-~~-----------~~~~~svG~p~pg~~~v~i~~~d~~~ 790 (994)
T PRK07868 728 SGMPTGLWERVVEAF-----APAHVVEFFATTDGQAVLAN-VS-----------GAKIGSKGRPLPGAGRVELAAYDPEH 790 (994)
T ss_pred CCCCHHHHHHHHHHh-----Cchheeeeeecccccccccc-cC-----------CCCCcccCCccCCCCceeEEEecCcC
Confidence 459999999999875 34779999999998764331 10 01246899999998 66654
Q ss_pred -----cCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHH--HhhhccCCCCCceeecCcEEEEE-CCeEEEEecCC
Q 037878 842 -----NPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQIT--FRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIK 913 (2280)
Q Consensus 842 -----d~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~--f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~d 913 (2280)
|+++....++.|+.|||+++|++ |+ +|+.+..+ |. +++|||||||+|+++ ||+|+|+||+|
T Consensus 791 g~li~d~~G~~~~~~~ge~Gel~~~~~~----~~-~p~~t~~~~~~~------~~dgw~~TGDlg~~d~dG~l~~~GR~d 859 (994)
T PRK07868 791 DLILEDDRGFVRRAEVNEVGVLLARARG----PI-DPTASVKRGVFA------PADTWISTEYLFRRDDDGDYWLVDRRG 859 (994)
T ss_pred CceeecCCceEEEcCCCCceEEEEecCC----CC-ChhhhhHhcccc------cCCEEEeccceEEEcCCCCEEEeccCC
Confidence 33332123478999999999986 44 46554333 31 246999999999997 99999999999
Q ss_pred CeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHH
Q 037878 914 DLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKT 992 (2280)
Q Consensus 914 d~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~ 992 (2280)
||||++|+||+|+|||++|.+||+|.+ |+|++++++. + ...+++++ ..++... .+++.+++++
T Consensus 860 d~Ik~~G~~I~p~EIE~~L~~hp~V~~---aaVvg~~d~~-~---------~~~~a~Vv---~~~~~~~~~~~L~~~l~~ 923 (994)
T PRK07868 860 SVIRTARGPVYTEPVTDALGRIGGVDL---AVTYGVEVGG-R---------QLAVAAVT---LRPGAAITAADLTEALAS 923 (994)
T ss_pred CEEEeCCceEcHHHHHHHHhcCCCeeE---EEEEeecCCC-C---------ceEEEEEE---eCCCCcCCHHHHHHHHHh
Confidence 999999999999999999999999975 8889887642 1 12233332 2333322 2456666653
Q ss_pred HHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 993 RVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 993 ~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
+ +.+++| ..++.+++||+|+|||++|++|+++
T Consensus 924 -l-~~y~vP---~~i~~v~~lP~T~sGKi~r~~L~~~ 955 (994)
T PRK07868 924 -L-PVGLGP---DIVHVVPEIPLSATYRPTVSALRAA 955 (994)
T ss_pred -C-CCCcCC---eEEEEeCCCCCCccccEehHHHHhc
Confidence 4 335544 4555669999999999999998765
No 121
>KOG1180 consensus Acyl-CoA synthetase [Lipid transport and metabolism]
Probab=100.00 E-value=3.9e-49 Score=465.77 Aligned_cols=460 Identities=21% Similarity=0.289 Sum_probs=341.4
Q ss_pred cccccCcccccCCCCCCCCCCCCHHHHHHhhccccccCCceEEEEEc---------CCCc--------eeeeccHHHHHH
Q 037878 448 DNWARNFKELEELPGVEFPELSSLDGYLKHWGTHRITQKKTLFTWIN---------EEGV--------AVNQSTYEELDA 510 (2280)
Q Consensus 448 ~~~~~~~~~~~~~~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~---------~~g~--------~~~~lTY~eL~~ 510 (2280)
...+|+......+...+++.-.|+.+++++..... .++.++-+.+ .+|+ .+..+||.|+.+
T Consensus 20 ~~p~Rnv~~~~~L~~~~~~g~~Tl~~~~~~~~~k~--g~~~~mGtR~li~~h~ek~~dGK~f~k~~Lg~Y~w~sy~ev~~ 97 (678)
T KOG1180|consen 20 TAPYRNVRSFDGLVSPPNPGASTLYELFEECVKKF--GKKDAMGTRELIKEHEEKQVDGKTFEKYELGDYKWMSYNEVYE 97 (678)
T ss_pred CccccccccCCCccCCCCCCcccHHHHHHHHHHhc--CCCccccHHHHHHHHhhccCCCeEEEEEeccceeeecHHHHHH
Confidence 34567776656677778888899999998777653 4444443211 1233 247889999999
Q ss_pred HHHHHHHHHHhcCCCCCCCCCE-EEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEE
Q 037878 511 NASRIAHKLLTSRKPVIKPGDR-VLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAIL 589 (2280)
Q Consensus 511 ~a~~lA~~L~~~~~~Gv~~Gd~-V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl 589 (2280)
++.++|++|... |++++++ ++|+.+.+.+|+++.+||++.+...|-+-.....+. +.+-+.+++++.++
T Consensus 98 ~~~~~gsGL~~l---G~k~~e~k~~iFa~TraeWm~ta~gC~~q~ipvVT~Y~TLGeea-------l~hsl~Et~~~~i~ 167 (678)
T KOG1180|consen 98 RVHNFGSGLVKL---GLKPKETKIAIFAETRAEWMITAQGCFSQNIPVVTAYATLGEEA-------LIHSLNETESTAIF 167 (678)
T ss_pred HHHHHHHHHHHh---CCCCCCCeEEEEecchHHHHHHHHHHHhcCCeEEEEehhcChhh-------hhhhhccccceEEE
Confidence 999999999999 8997776 999999999999999999999999999988887776 77888888999999
Q ss_pred EccccchhhccC--CCCCCC--------------------------ccccccccccccccccccccccCCCCCCCeEEEE
Q 037878 590 STIGYHSAVRVG--SWPNLP--------------------------WLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQ 641 (2280)
Q Consensus 590 ~~~~~~~~~~~~--~~~~~~--------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~Ii 641 (2280)
++.+..+.+... ....+. ...++++ .........++.++.|+|+|+||
T Consensus 168 T~~~LL~kl~~~l~~~~~vk~II~~d~id~~~~~~~v~~i~~p~i~i~Sf~~v----~~lG~~~~~~~~~P~p~Dia~IM 243 (678)
T KOG1180|consen 168 TDSELLPKLKAPLKQAKTVKHIIYFDPIDYDAAKDDVNSIVRPDIKIISFDDV----EKLGKENEIPPHPPKPSDIACIM 243 (678)
T ss_pred eCHHHHHHHHHHHhccCceeEEEEecCCCCccchhhhhhhccCCeEEEEHHHH----HhhCCcCCCCCCCCCCCceEEEE
Confidence 887655432211 001111 1111111 11111222334556889999999
Q ss_pred eccCCCCCceEEEEchHHHHHHHHHHHHHc-CCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHH
Q 037878 642 FTSGSTGDAKGVMITHGGLIHNVKLMRKRY-KSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLW 720 (2280)
Q Consensus 642 yTSGSTG~PKgV~~tH~~l~~~~~~~~~~~-~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l 720 (2280)
|||||||.||||+++|+|+++.+....... .+.+.|+++.++|++|++.+..++ .+++-|+++=..++..+......+
T Consensus 244 YTSGSTG~PKGVml~H~NiVA~~~G~~~~v~~lg~~D~yi~yLPLAHIlEl~aE~-~~ft~G~~iGY~S~~TLtdts~ki 322 (678)
T KOG1180|consen 244 YTSGSTGLPKGVMLTHSNIVAGVTGVGENVPELGPKDRYIAYLPLAHILELTAEL-VCFTWGGRIGYSSPLTLTDTSSKI 322 (678)
T ss_pred EcCCCCCCCceEEEecccHHhhhhhhcccCcccCCCceEEEechHHHHHHHHHHH-HHHhhCCEeecCCcceecccchhh
Confidence 999999999999999999999998887766 678999999999999999997765 456666666554444332111111
Q ss_pred ----HHHHhhcceeeecCcHHHHHHHHHHHhcccccc-------------------c------------------ccCCC
Q 037878 721 ----LETMSKYRATHSAGPNFAFELMVRRLESSKDKV-------------------R------------------SFDLS 759 (2280)
Q Consensus 721 ----~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~-------------------~------------------~~~l~ 759 (2280)
--.+...++|++.++|.+++.+.+......... . ..-=.
T Consensus 323 ~kg~kGD~~~lkPTiM~~VpAV~drVrKgVl~kV~~~~~~~k~lF~~aY~~K~~~~~~~g~~s~~ld~lVFkKIr~~lGG 402 (678)
T KOG1180|consen 323 KKGCKGDLTELKPTIMAAVPAVMDRVRKGVLSKVNAMPGLQKKLFWTAYERKLSLIERNGPGSPLLDALVFKKIRALLGG 402 (678)
T ss_pred ccCCcCccccccchhhhhhHHHHHHHHHHHHHHHhhchHHHHHHHHHHHHHHHHHHhccCCchhhHHHHHHHHHHHHhCC
Confidence 112456789999999998887644322211000 0 00015
Q ss_pred CccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEE
Q 037878 760 SMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIR 839 (2280)
Q Consensus 760 ~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~ 839 (2280)
+||++++||+|++++..+.+.-. -+|++.++||.||+|..++..... ....|.+|.|++.++++
T Consensus 403 ~lR~~LsGGapLS~dtQrF~nic------~C~Pv~qGYGLTEtca~~tv~e~~----------d~~~g~vG~pl~c~eiK 466 (678)
T KOG1180|consen 403 NLRYILSGGAPLSPDTQRFMNIC------FCCPVLQGYGLTETCAAATVLEPE----------DFSTGRVGAPLPCCEIK 466 (678)
T ss_pred ceEEEEeCCCCCCHHHHHHHHHh------ccccccccccccchhcccEecChh----------hcccccccCCccceEEE
Confidence 89999999999999965554443 356899999999999887765322 22357899999999999
Q ss_pred EEc-CCCCcccC-CCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeE
Q 037878 840 IVN-PETSEEIG-EPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLI 916 (2280)
Q Consensus 840 Ivd-~~~~~~~~-p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~I 916 (2280)
++| +|++...- .+ ..|||+|+|+++..||++|||+|++.|.. .+|.+||+|||+|+++ ||.|.+++|++|.|
T Consensus 467 Lvdw~EgGY~~~~~P-PrGEI~i~G~~vt~gY~kn~ekT~e~ft~----~~G~~WF~TGDIGe~~pdG~LkIIDRKKdLV 541 (678)
T KOG1180|consen 467 LVDWEEGGYFAKNKP-PRGEILIGGPNVTMGYYKNEEKTKEDFTV----EDGQRWFRTGDIGEFHPDGCLKIIDRKKDLV 541 (678)
T ss_pred EEEhhhcCccCCCCC-CCceEEecCCccChhhhCChhhhhhhcee----cCCcEEEeccccceecCCCcEEEeechhhhh
Confidence 999 55542211 12 58999999999999999999999999975 3567899999999996 99999999999999
Q ss_pred EE-CCeeechHHHHHHHHhccCCcCCceeEEEe
Q 037878 917 IV-AGRNVYSADVEKTVESSTEHIRPGCCAVIG 948 (2280)
Q Consensus 917 Ki-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~ 948 (2280)
|+ +|+.|.++-||+++...|-|.- .+|.+
T Consensus 542 Klq~GEYIsL~KvEa~l~s~p~V~N---ICvyA 571 (678)
T KOG1180|consen 542 KLQNGEYISLGKVEAALRSSPYVDN---ICVYA 571 (678)
T ss_pred hhcccceeehHHHHHHHhcCcchhh---eEEec
Confidence 99 8999999999999999998854 45554
No 122
>PRK13383 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=6.3e-48 Score=516.28 Aligned_cols=477 Identities=19% Similarity=0.221 Sum_probs=361.4
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.+.+++.+ +|+++|+... + +.+||+||.++++++|+.|++. |+++||+|+++++|++++++++
T Consensus 34 ~~~~~~~~~~~a~~--~p~~~a~~~~--~----~~lTy~el~~~~~~la~~L~~~---gi~~g~~V~i~~~~~~~~~~~~ 102 (516)
T PRK13383 34 GTNPYTLLAVTAAR--WPGRTAIIDD--D----GALSYRELQRATESLARRLTRD---GVAPGRAVGVMCRNGRGFVTAV 102 (516)
T ss_pred CCcHHHHHHHHHHH--CCCCcEEEeC--C----CcEeHHHHHHHHHHHHHHHHhc---CCCCCCEEEEECCCCHHHHHHH
Confidence 45678888877776 4889998642 2 4799999999999999999988 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVV 627 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (2280)
|||+++|++++|+++..+.++ +.+++++++++.++++......+.... .. ....+.. ..... ..
T Consensus 103 la~~~~G~v~vpl~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~-~~--~~~~~~~---~~~~~---~~ 166 (516)
T PRK13383 103 FAVGLLGADVVPISTEFRSDA-------LAAALRAHHISTVVADNEFAERIAGAD-DA--VAVIDPA---TAGAE---ES 166 (516)
T ss_pred HHHHHhCeEEEEcCccCCHHH-------HHHHHhcCCCCEEEEchhHHHHHHhhh-cc--eEEeccc---hhhhh---cC
Confidence 999999999999999999888 889999999999999876544332110 00 0001100 00000 00
Q ss_pred ccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHH--HHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceE
Q 037878 628 CFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHN--VKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTA 705 (2280)
Q Consensus 628 ~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~--~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~ 705 (2280)
...+..+++.++|+|||||||+||||+++|+..... .......+++..+++++..+|++|.+++. .++.++..|+++
T Consensus 167 ~~~p~~~~~~~~il~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~d~~~~~~pl~h~~g~~-~~~~~l~~G~~~ 245 (516)
T PRK13383 167 GGRPAVAAPGRIVLLTSGTTGKPKGVPRAPQLRSAVGVWVTILDRTRLRTGSRISVAMPMFHGLGLG-MLMLTIALGGTV 245 (516)
T ss_pred CCCCCCCCCCcEEEECCCCCCCCCeeeecchhhhhhhhHHhHHhhhccCCCCeEEEecCCcchhhHH-HHHHHHhcCCEE
Confidence 011223467789999999999999999999853221 12223456778899999999999999984 567788999998
Q ss_pred EEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcC
Q 037878 706 ILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRP 785 (2280)
Q Consensus 706 vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~ 785 (2280)
++... .++..+++.++++++|.+..+|.++..+.+...... ...+++++|.+++||+++++++.++|.+.+
T Consensus 246 ~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~~~~~~lr~i~~gG~~l~~~~~~~~~~~~-- 316 (516)
T PRK13383 246 LTHRH----FDAEAALAQASLHRADAFTAVPVVLARILELPPRVR---ARNPLPQLRVVMSSGDRLDPTLGQRFMDTY-- 316 (516)
T ss_pred EECCC----CCHHHHHHHHHHhCCcEEEecHHHHHHHHhcccccc---ccCCCCceEEEEECCCCCCHHHHHHHHHHc--
Confidence 77542 378999999999999999999999988765432211 113578999999999999999999999875
Q ss_pred CCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCc
Q 037878 786 FGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSA 865 (2280)
Q Consensus 786 ~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v 865 (2280)
+..+++.||+||++..+...... . ....+++|+|+|+++++|+|+++ ..+++|+.|||+++|+.+
T Consensus 317 ----g~~v~~~YG~tE~~~~~~~~~~~-~--------~~~~~~~G~~~~~~~~~i~d~~~--~~~~~g~~Gel~v~g~~~ 381 (516)
T PRK13383 317 ----GDILYNGYGSTEVGIGALATPAD-L--------RDAPETVGKPVAGCPVRILDRNN--RPVGPRVTGRIFVGGELA 381 (516)
T ss_pred ----Cchhhhcccccccccceeccccc-c--------ccCCCcccCCCCCcEEEEECCCC--CCCCCCCceEEEEecCcc
Confidence 45699999999998654432211 0 11236789999999999999775 345789999999999999
Q ss_pred ccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCcee
Q 037878 866 GIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCC 944 (2280)
Q Consensus 866 ~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~a 944 (2280)
+.||++++. +.+ .++||+|||+++++ ||+++++||+||+||++|++|+|.|||++|.++|+|.+ +
T Consensus 382 ~~~Y~~~~~---~~~--------~~g~~~TGDl~~~d~~G~l~i~GR~~~~i~~~G~~v~~~eiE~~l~~~~~v~~---~ 447 (516)
T PRK13383 382 GTRYTDGGG---KAV--------VDGMTSTGDMGYLDNAGRLFIVGREDDMIISGGENVYPRAVENALAAHPAVAD---N 447 (516)
T ss_pred cccccCCch---hhe--------ecCceecceeEEEcCCccEEEeccccceEEECCEEECHHHHHHHHHhCCCeeE---E
Confidence 999998753 112 14899999999997 99999999999999999999999999999999999865 8
Q ss_pred EEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccch
Q 037878 945 AVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKR 1023 (2280)
Q Consensus 945 aVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR 1023 (2280)
++++++++..+ +....++.. .++.. ...++.+.+++++.. ++.|. .+..+++||+|.+||++|
T Consensus 448 ~vv~~~~~~~g----------~~~~~~v~~--~~~~~~~~~~l~~~~~~~l~~-~~~p~---~i~~v~~iP~t~~gKi~r 511 (516)
T PRK13383 448 AVIGVPDERFG----------HRLAAFVVL--HPGSGVDAAQLRDYLKDRVSR-FEQPR---DINIVSSIPRNPTGKVLR 511 (516)
T ss_pred EEEeccccccC----------ceEEEEEEE--CCCCCCCHHHHHHHHHHhccc-CCCCc---EEEEeCCCCCCCCCcCcH
Confidence 88887765322 222333322 22222 235667777777643 55443 444458999999999999
Q ss_pred HHH
Q 037878 1024 FEC 1026 (2280)
Q Consensus 1024 ~~L 1026 (2280)
++|
T Consensus 512 ~~L 514 (516)
T PRK13383 512 KEL 514 (516)
T ss_pred HHh
Confidence 874
No 123
>PRK08276 long-chain-fatty-acid--CoA ligase; Validated
Probab=100.00 E-value=4e-48 Score=517.16 Aligned_cols=475 Identities=20% Similarity=0.283 Sum_probs=355.8
Q ss_pred eeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHH
Q 037878 501 NQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENIS 580 (2280)
Q Consensus 501 ~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il 580 (2280)
+.+||+||.++++++|+.|.++ |+++||+|+++++|++++++++|||+++|++++|+++..+.++ +..++
T Consensus 10 ~~~ty~el~~~v~~~a~~L~~~---g~~~~~~V~i~~~~~~~~~~~~la~~~~G~~~~~l~~~~~~~~-------~~~~~ 79 (502)
T PRK08276 10 EVVTYGELEARSNRLAHGLRAL---GLREGDVVAILLENNPEFFEVYWAARRSGLYYTPINWHLTAAE-------IAYIV 79 (502)
T ss_pred cEEEHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEeCCCHHHHHHHHHHHhcCcEEEecccccCHHH-------HHHHH
Confidence 5799999999999999999998 8999999999999999999999999999999999999998887 88999
Q ss_pred hhcCCeEEEEccccchhhccC--CCC-CCCccccc-ccccc--ccccccccccccCCCCCCCeEEEEeccCCCCCceEEE
Q 037878 581 KSCGAVAILSTIGYHSAVRVG--SWP-NLPWLHTD-SWVKN--SKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVM 654 (2280)
Q Consensus 581 ~~~~~~~vl~~~~~~~~~~~~--~~~-~~~~~~~~-~~~~~--~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~ 654 (2280)
++++++.++++.......... ..+ ....+... ..... .................++.++++|||||||.||||+
T Consensus 80 ~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~TSGtTG~PK~v~ 159 (502)
T PRK08276 80 DDSGAKVLIVSAALADTAAELAAELPAGVPLLLVVAGPVPGFRSYEEALAAQPDTPIADETAGADMLYSSGTTGRPKGIK 159 (502)
T ss_pred hcCCCCEEEEccchhhHHHHHhhhccccccEEEEeCCCCCccccHHHHHhcCCCCCCCCCCcceEEEECCCCCCCCceEE
Confidence 999999999986554332110 001 11111000 00000 0000000001112235577899999999999999999
Q ss_pred EchHHHHHHH------HHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcc
Q 037878 655 ITHGGLIHNV------KLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYR 728 (2280)
Q Consensus 655 ~tH~~l~~~~------~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~ 728 (2280)
++|+++.... ...........++++++++|++|.+++... +.++..|+++++.+. .+|..+++.+++++
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~~~~~~~----~~~~~~~~~i~~~~ 234 (502)
T PRK08276 160 RPLPGLDPDEAPGMMLALLGFGMYGGPDSVYLSPAPLYHTAPLRFG-MSALALGGTVVVMEK----FDAEEALALIERYR 234 (502)
T ss_pred EccCCcchhhhhHHhhhhhhhcccCCCCCEEEEcCcHHHHHHHHHH-HHHHhccceEEEcCC----CCHHHHHHHHHHhC
Confidence 9988754322 222222223578899999999999987544 568889999887653 38999999999999
Q ss_pred eeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceec
Q 037878 729 ATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSC 808 (2280)
Q Consensus 729 vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~ 808 (2280)
+|++.++|+++..+.+...... ...+++++|.+++|||+++.++.+++.+.+ +..+++.||+||++.+++.
T Consensus 235 ~t~~~~~P~~~~~l~~~~~~~~---~~~~~~~lr~i~~~g~~~~~~~~~~~~~~~------~~~~~~~yG~tE~~~~~~~ 305 (502)
T PRK08276 235 VTHSQLVPTMFVRMLKLPEEVR---ARYDVSSLRVAIHAAAPCPVEVKRAMIDWW------GPIIHEYYASSEGGGVTVI 305 (502)
T ss_pred CeEEEehHHHHHHHHhCccccC---CCCCcccceEEEecCCCCCHHHHHHHHHHh------CcHhhhhcccccccceeEe
Confidence 9999999999888875432211 235788999999999999999999998864 3568999999999875543
Q ss_pred ccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCC
Q 037878 809 AYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNR 888 (2280)
Q Consensus 809 ~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~ 888 (2280)
..... ....+++|+|+ +.+++|+|+++ .+++.|+.|||+++|+.++.||+++|+.+.+.|.+
T Consensus 306 ~~~~~---------~~~~~~~G~~~-~~~~~i~d~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~------ 367 (502)
T PRK08276 306 TSEDW---------LAHPGSVGKAV-LGEVRILDEDG--NELPPGEIGTVYFEMDGYPFEYHNDPEKTAAARNP------ 367 (502)
T ss_pred cCccc---------cccCCCcceec-ccEEEEECCCC--CCCcCCCceEEEEECCCccchhcCCHHHHHHHhcC------
Confidence 22110 11236789999 88999999764 35579999999999999999999999999998864
Q ss_pred CCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCc
Q 037878 889 GRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQ 967 (2280)
Q Consensus 889 ~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~ 967 (2280)
++||+|||+++++ ||.+++.||+||++|++|++|++.|||.+|+++|+|.+ |+|++..++..+ +.
T Consensus 368 -~~~~~TGD~~~~~~~g~~~~~GR~~~~i~~~G~~v~~~~iE~~i~~~~~v~~---~~v~~~~~~~~~----------~~ 433 (502)
T PRK08276 368 -HGWVTVGDVGYLDEDGYLYLTDRKSDMIISGGVNIYPQEIENLLVTHPKVAD---VAVFGVPDEEMG----------ER 433 (502)
T ss_pred -CCceeecceEEEcCCcCEEEeccCcceEEeCCEEeCHHHHHHHHHhCCCcce---EEEEeCCCcccC----------ce
Confidence 3899999999996 99999999999999999999999999999999999865 888887654322 12
Q ss_pred eEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcC
Q 037878 968 VGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 968 ~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
. +++++..++.....++.+.+++.+.+++...+.|..++.++++|+|+|||++|++|++.+.++
T Consensus 434 ~--~~~v~~~~~~~~~~~~~~~i~~~~~~~l~~~~~p~~i~~~~~lP~t~~GKi~r~~L~~~~~~~ 497 (502)
T PRK08276 434 V--KAVVQPADGADAGDALAAELIAWLRGRLAHYKCPRSIDFEDELPRTPTGKLYKRRLRDRYWEG 497 (502)
T ss_pred E--EEEEEECCCCCCChhhHHHHHHHHHhhccCCCCCcEEEEecCCCCCcccchhHHHHHHHHHhh
Confidence 2 222223333223333344455555544444445556666799999999999999999987544
No 124
>PRK13391 acyl-CoA synthetase; Provisional
Probab=100.00 E-value=9.3e-48 Score=514.28 Aligned_cols=486 Identities=20% Similarity=0.275 Sum_probs=359.1
Q ss_pred cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCC
Q 037878 484 TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPP 563 (2280)
Q Consensus 484 ~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~ 563 (2280)
.|+++|+.+.++ + +.+||.||.++++++|+.|.+. |+++|++|+++++|+++++++++||+++|++++|+++.
T Consensus 10 ~p~~~a~~~~~~-~---~~~ty~~l~~~~~~la~~L~~~---g~~~~~~V~v~~~~~~~~~~~~~a~~~~G~~~~~l~~~ 82 (511)
T PRK13391 10 TPDKPAVIMAST-G---EVVTYRELDERSNRLAHLFRSL---GLKRGDHVAIFMENNLRYLEVCWAAERSGLYYTCVNSH 82 (511)
T ss_pred CCCceEEEecCC-C---CEeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHHHHHhccEEeccccc
Confidence 488999876433 2 4799999999999999999998 89999999999999999999999999999999999999
Q ss_pred CccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-ccccc---cccc--cccccccccccccCCCCCC
Q 037878 564 DPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTD---SWVK--NSKNLLAENVVCFTESQPD 635 (2280)
Q Consensus 564 ~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~---~~~~--~~~~~~~~~~~~~~~~~~~ 635 (2280)
.+.++ +.+++++++++.++++.......... ..+... .+... .... ........ .......+.+
T Consensus 83 ~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 154 (511)
T PRK13391 83 LTPAE-------AAYIVDDSGARALITSAAKLDVARALLKQCPGVRHRLVLDGDGELEGFVGYAEAVAG-LPATPIADES 154 (511)
T ss_pred cCHHH-------HHHHHhccCCcEEEEchhhHHHHHHHHhcCCCceEEEEecCCCCCcccccHHHHhcC-CCCCCCCCcc
Confidence 98887 88999999999999986543322100 001100 00000 0000 00000000 0011112344
Q ss_pred CeEEEEeccCCCCCceEEEE--chHHHHH---HHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCc
Q 037878 636 DLCFLQFTSGSTGDAKGVMI--THGGLIH---NVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSP 710 (2280)
Q Consensus 636 d~a~IiyTSGSTG~PKgV~~--tH~~l~~---~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~ 710 (2280)
+.++|+|||||||.||||++ +|.++.. ........+++.+++++++.+|++|.+++. ..+.++..|+++++.+.
T Consensus 155 ~~a~il~TSGtTG~PKgv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~~~~-~~~~~~~~g~~~~~~~~ 233 (511)
T PRK13391 155 LGTDMLYSSGTTGRPKGIKRPLPEQPPDTPLPLTAFLQRLWGFRSDMVYLSPAPLYHSAPQR-AVMLVIRLGGTVIVMEH 233 (511)
T ss_pred cccEEEECCCCCCCCCEEEEccccchhhhhhHHHHHHHHhcCCCCCCeEEEcCCHHHHHHHH-HHHHHHHcCceEEECCC
Confidence 67999999999999999995 4666533 234445667788899999999999998874 55678888998888753
Q ss_pred cccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCC
Q 037878 711 LTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQ 790 (2280)
Q Consensus 711 ~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~ 790 (2280)
.++..+++.++++++|++..+|+++..+.+...... ...+++++|.+++||+++++++.+++.+.+ +
T Consensus 234 ----~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~---~~~~~~~l~~~~~gg~~~~~~~~~~~~~~~------g 300 (511)
T PRK13391 234 ----FDAEQYLALIEEYGVTHTQLVPTMFSRMLKLPEEVR---DKYDLSSLEVAIHAAAPCPPQVKEQMIDWW------G 300 (511)
T ss_pred ----CCHHHHHHHHHHhCCeEEEehHHHHHHHHhCchhhc---ccCCccceeEEEEccCCCCHHHHHHHHHHc------C
Confidence 389999999999999999999999887764322111 124678999999999999999999998764 4
Q ss_pred cccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccC
Q 037878 791 GVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYW 870 (2280)
Q Consensus 791 ~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~ 870 (2280)
..+++.||+||++.++...... . ....+++|+|+++ .++|+|+++ .+++.|+.|||+++|+ ++.||+
T Consensus 301 ~~v~~~YG~tE~~~~~~~~~~~-~--------~~~~~~vG~~~~g-~~~i~d~~~--~~~~~g~~Gel~~~g~-~~~gy~ 367 (511)
T PRK13391 301 PIIHEYYAATEGLGFTACDSEE-W--------LAHPGTVGRAMFG-DLHILDDDG--AELPPGEPGTIWFEGG-RPFEYL 367 (511)
T ss_pred CceeeeeccccccceEEecCcc-c--------cccCCCcCCcccc-eEEEECCCC--CCCCCCCceEEEEecC-cceEEc
Confidence 5699999999998765432111 0 1124678999999 699999765 4457899999999999 899999
Q ss_pred CCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEec
Q 037878 871 GREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGV 949 (2280)
Q Consensus 871 ~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~ 949 (2280)
++|+.+++.|..+ ++||+|||+|+++ ||.++|.||.||++|++|++|+|.|||++|.+||.|.+ |+|++.
T Consensus 368 ~~~~~~~~~~~~~------~~w~~TGD~g~~~~~g~l~~~gR~~~~i~~~G~~v~~~eie~~l~~~~~v~~---~~v~~~ 438 (511)
T PRK13391 368 NDPAKTAEARHPD------GTWSTVGDIGYVDEDGYLYLTDRAAFMIISGGVNIYPQEAENLLITHPKVAD---AAVFGV 438 (511)
T ss_pred CChhHhHHhhccC------CCEEecCCEEEECCCccEEEeccCCCEEEeCCEEECHHHHHHHHHhCCCcce---EEEEec
Confidence 9999999887532 4899999999997 99999999999999999999999999999999999865 888887
Q ss_pred cccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 950 PEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
+++..+ +....++. ..++....+++.+.+++.+.++++....|..+..++++|+|++||++|+.|++.
T Consensus 439 ~~~~~g----------~~~~~~~~--~~~~~~~~~~~~~~l~~~~~~~l~~~~~P~~i~~~~~~P~t~~gKv~r~~l~~~ 506 (511)
T PRK13391 439 PNEDLG----------EEVKAVVQ--PVDGVDPGPALAAELIAFCRQRLSRQKCPRSIDFEDELPRLPTGKLYKRLLRDR 506 (511)
T ss_pred CCcccC----------ceeEEEEE--ECCCCCcccchHHHHHHHHHhhcccCcCCcEEEEeecCCCCCccceeHHHHHHH
Confidence 765432 22222222 222221222223334444443333334445556669999999999999999988
Q ss_pred hhc
Q 037878 1030 FVD 1032 (2280)
Q Consensus 1030 ~~~ 1032 (2280)
|..
T Consensus 507 ~~~ 509 (511)
T PRK13391 507 YWG 509 (511)
T ss_pred hhc
Confidence 754
No 125
>cd08152 y4iL_like Catalase-like heme-binding proteins similar to the uncharacterized y4iL. Catalase is a ubiquitous enzyme found in both prokaryotes and eukaryotes involved in the protection of cells from the toxic effects of peroxides. It catalyses the conversion of hydrogen peroxide to water and molecular oxygen. Several other related protein families share the catalase fold and bind to heme, but do not necessarily have catalase activity. This family contains uncharacterized proteins similar to Rhizobium sp. NGR234 y4iL, of mostly bacterial origin.
Probab=100.00 E-value=4.6e-50 Score=485.02 Aligned_cols=271 Identities=20% Similarity=0.280 Sum_probs=227.7
Q ss_pred cccccccccc-cceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCC-CCcccccccccEEEeeccCCC------CC
Q 037878 1713 KSRYFHRIGV-SGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSA-DDDARIDARGAAIRIFSDLNG------NT 1784 (2280)
Q Consensus 1713 ~~R~~Hakg~-~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~-~~D~~~~~rG~Aik~~~~~~~------~~ 1784 (2280)
..|.+||||+ |++|+|+|++|+|+++++++|++|++|||++||||++++ .+|..+|+|||||||++. +| .+
T Consensus 3 ~~R~~HaKg~G~v~G~F~v~~~~~~~~~~~~F~~~~~~pv~vRfS~~~~~~~~D~~~~~RG~AiK~~~~-~G~~l~~~~~ 81 (305)
T cd08152 3 ALRDAHAKSHGCLKAEFTVLDDLPPELAQGLFAEPGTYPAVIRFSNAPGDILDDSVPDPRGMAIKVLGV-PGEKLLPEED 81 (305)
T ss_pred ccccccCcccccceEEEEECCCchHHHhhhhcCCCCeEEEEEEecCCCCCCCCcccCCCCeEEEEEEcC-cccccccccC
Confidence 5799999999 589999999999999999999989999999999999887 559999999999999985 33 35
Q ss_pred CcceeeecccccccccCChhhHHHHHhhccchh------hhhhcc-Ccchhhhhhhc----------ccCCCccccceee
Q 037878 1785 SSLLDLTLKTGNAFYARTIGDFATWLVCGLAAR------EEHVKR-VPHIRDAVWKS----------LRLSDSYAEMHYY 1847 (2280)
Q Consensus 1785 ~~~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~------~~~~~~-~~~~~~~~~~~----------~~~p~s~~~~~y~ 1847 (2280)
+++|||+|||+|+||++|+++|++|+++..+.. ..++.. ++.....+... .+.|.||++++||
T Consensus 82 ~~~~D~v~~n~pvF~~~d~~~f~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~s~~~~~y~ 161 (305)
T cd08152 82 ATTQDFVLVNHPVFFARDAKDYLALLKLLARTTSLPDGAKAALSAPLRGALRVLEAAGGESPTLKLGGHPPAHPLGETYW 161 (305)
T ss_pred CcccceeeecCceeecCCHHHHHHHHHHHHhhcCCchHHHHHHHHHHHHHHHHHHhhcccccccccccCCCCCcccccee
Confidence 789999999999999999999999998865321 112222 33333333222 2368999999999
Q ss_pred eeeeEEEEEeCCcEEEEEEEeecCCCCCC-CCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEE
Q 037878 1848 SNICRLFRFTDGQEMYVKFKLRPYDESIG-EDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIF 1926 (2280)
Q Consensus 1848 s~~~~~~~~~~g~~~~vk~~~~P~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l 1926 (2280)
|+|+|+|+|. +|||+++|.++... ++.+++ .+.+++|||+++|.+||+++ +++|+|
T Consensus 162 s~~~fr~g~~-----~vk~~~~P~~~~~~~l~~~~~-----------------~~~~~~d~L~~~L~~~l~~g-~~~f~l 218 (305)
T cd08152 162 SQAPYRFGDY-----VAKYSVVPASPALPALTGKEL-----------------DLTDDPDALREALADFLAEN-DAEFEF 218 (305)
T ss_pred cccceeEcce-----eEEEEEEECCCccccCchhhh-----------------hcCCCccHHHHHHHHHHHhC-CceEEE
Confidence 9999999754 99999999654432 122111 13457899999999999997 699999
Q ss_pred EEEEeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCC----h--hhhccccccCCcCCCccccccCCCccccc
Q 037878 1927 QLQIRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLS----T--EESEKLEFNPYLKCNEIDVIPATTSSQSA 2000 (2280)
Q Consensus 1927 ~vQ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~----~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d 2000 (2280)
+||+++++|.||++ |+||+|||+++|+++||+|+|+++.. + +.||+++|||||+++||+|++
T Consensus 219 ~vQl~~~~d~~pi~----D~tv~W~e~~~p~i~vg~l~i~~~~~~~~~~~~~~~~~l~F~P~~~~~g~~p~g-------- 286 (305)
T cd08152 219 RIQLCTDLEKMPIE----DASVEWPEALSPFVPVATITIPPQDFDSPARQRAFDDNLSFNPWHGLAEHRPLG-------- 286 (305)
T ss_pred EEEecCchhhCCCC----cCCccCCCccCCCeEEEEEEECCCCccCHHHHhhhhhccccCccccccccCcCh--------
Confidence 99999999988877 99999999999999999999998765 2 579999999999999999998
Q ss_pred ccccchhhHHHhhhHhhcC
Q 037878 2001 SIDHGRSLIYEICQHLRNG 2019 (2280)
Q Consensus 2001 ~i~~~R~~~Y~~s~~~R~~ 2019 (2280)
||+++|+.||..|+++|+.
T Consensus 287 ~i~r~R~~vY~~S~~~R~~ 305 (305)
T cd08152 287 SINRARKAVYEASSAFRHE 305 (305)
T ss_pred HHHHHHHHHHHHHHHHhcC
Confidence 9999999999999999974
No 126
>PRK07798 acyl-CoA synthetase; Validated
Probab=100.00 E-value=3.8e-47 Score=512.50 Aligned_cols=496 Identities=21% Similarity=0.268 Sum_probs=366.4
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
++.+++++.+++. |+++|+.+.+ +.+||.||.++++++|+.|.+. |+++||+|+++++|+++++++++|
T Consensus 4 ~l~~~~~~~a~~~--p~~~a~~~~~------~~~ty~el~~~~~~la~~L~~~---g~~~~~~v~v~~~n~~~~~~~~~a 72 (533)
T PRK07798 4 NIADLFEAVADAV--PDRVALVCGD------RRLTYAELEERANRLAHYLIAQ---GLGPGDHVGIYARNRIEYVEAMLG 72 (533)
T ss_pred cHHHHHHHHHHhC--CCceEEEECC------ceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHH
Confidence 6788999999874 8999987632 5899999999999999999988 899999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-cccccccccc--------c
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTDSWVKN--------S 618 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~--------~ 618 (2280)
|+++|++++|+++..+.++ +.+++++++++.++++.......... ..+... .+..++.... .
T Consensus 73 ~~~~G~~~v~l~~~~~~~~-------l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (533)
T PRK07798 73 AFKARAVPVNVNYRYVEDE-------LRYLLDDSDAVALVYEREFAPRVAEVLPRLPKLRTLVVVEDGSGNDLLPGAVDY 145 (533)
T ss_pred HHhcCeEEEecCcCCCHHH-------HHHHHhhcCCCEEEEchhhHHHHHHHhccCCCccEEEEecCCcccccCCccccH
Confidence 9999999999999999887 88999999999999986543322211 001111 1111100000 0
Q ss_pred cccccc-cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHc---------CC------CCCcEEEEE
Q 037878 619 KNLLAE-NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRY---------KS------TSKTVLVSW 682 (2280)
Q Consensus 619 ~~~~~~-~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~---------~~------~~~d~~l~~ 682 (2280)
.+.... ..........+|.++|+|||||||.||||+++|+++...+......+ .+ ..+++++..
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 225 (533)
T PRK07798 146 EDALAAGSPERDFGERSPDDLYLLYTGGTTGMPKGVMWRQEDIFRVLLGGRDFATGEPIEDEEELAKRAAAGPGMRRFPA 225 (533)
T ss_pred HHHHhccCCcCCCCCCCCCceEEEECCCCCCCCcEEEEecHHHHHHHhhhhhhhcccchhhhhhhcccccCCCCceEEEe
Confidence 000000 00011112234567999999999999999999999876554432221 11 567899999
Q ss_pred cCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHH-HHHHHHhcccccccccCCCCc
Q 037878 683 LPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFE-LMVRRLESSKDKVRSFDLSSM 761 (2280)
Q Consensus 683 ~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~-~l~~~~~~~~~~~~~~~l~~L 761 (2280)
+|++|+++++ .++.++..|+++++.+... .+|..+++.++++++|++..+|..+. .+.+.+... ...+++++
T Consensus 226 ~pl~~~~~~~-~~~~~l~~G~~~~~~~~~~--~~~~~~~~~i~~~~~t~~~~~~~~~~~~l~~~~~~~----~~~~~~~l 298 (533)
T PRK07798 226 PPLMHGAGQW-AAFAALFSGQTVVLLPDVR--FDADEVWRTIEREKVNVITIVGDAMARPLLDALEAR----GPYDLSSL 298 (533)
T ss_pred cchhhhhhHH-HHHHHHhcCceEEEecCCC--cCHHHHHHHHHHhCCeEEEechHHHHHHHHHHhccc----ccCCCCce
Confidence 9999999985 7889999999999987443 38999999999999999988776553 344433311 12467899
Q ss_pred cEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEE
Q 037878 762 KFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIV 841 (2280)
Q Consensus 762 r~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Iv 841 (2280)
|.+++||+++++++.++|.+.+ ++..+++.||+||++..++...... ....+. +.+.++..++|+
T Consensus 299 ~~i~~gG~~~~~~~~~~~~~~~-----~~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~g~-~~~~~~~~~~i~ 363 (533)
T PRK07798 299 FAIASGGALFSPSVKEALLELL-----PNVVLTDSIGSSETGFGGSGTVAKG---------AVHTGG-PRFTIGPRTVVL 363 (533)
T ss_pred EEEEECCCCCCHHHHHHHHHHc-----CCCeEEeeecccccccccccCCCCC---------CccCCC-CccCCCceEEEE
Confidence 9999999999999999998864 4678999999999865443221110 111111 267789999999
Q ss_pred cCCCCcccCCCCCe--eEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE
Q 037878 842 NPETSEEIGEPGKE--GEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV 918 (2280)
Q Consensus 842 d~~~~~~~~p~G~~--GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi 918 (2280)
|+++. .++.|+. |||+. ++.++.||+++|+.|+++|.. .++.+||+|||+++++ ||.++++||+||+||+
T Consensus 364 ~~~~~--~~~~g~~~~g~l~~-~~~~~~gy~~~~~~t~~~f~~----~~~~~~~~TGD~~~~~~~g~l~~~GR~~~~i~~ 436 (533)
T PRK07798 364 DEDGN--PVEPGSGEIGWIAR-RGHIPLGYYKDPEKTAETFPT----IDGVRYAIPGDRARVEADGTITLLGRGSVCINT 436 (533)
T ss_pred CCCCC--CCCCCCCCeeEEEe-ecCccccccCChhhhHHhhcc----CCCCceEEcCcEEEEcCCCcEEEEccccceEec
Confidence 98764 4467877 77765 567999999999999999864 2456899999999997 9999999999999999
Q ss_pred CCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHh
Q 037878 919 AGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEE 997 (2280)
Q Consensus 919 ~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~ 997 (2280)
+|++|+|.|||++|.++|+|.+ ++|++.+++..+ .....++. ..++. ....++.+.++++++.
T Consensus 437 ~G~~v~~~eIE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v~--~~~~~~~~~~~l~~~l~~~l~~- 500 (533)
T PRK07798 437 GGEKVFPEEVEEALKAHPDVAD---ALVVGVPDERWG----------QEVVAVVQ--LREGARPDLAELRAHCRSSLAG- 500 (533)
T ss_pred CCEEeCHHHHHHHHHhCcccee---EEEEeccCcccC----------ceEEEEEE--ECCCCCCCHHHHHHHHhhhccc-
Confidence 9999999999999999999865 788887665322 22223332 22332 2235566666666653
Q ss_pred cCcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 998 HGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 998 ~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
+++ |..++.+++||+|.+||+||+.|+++..
T Consensus 501 ~~~---P~~i~~~~~iP~t~~GK~~~~~~~~~~~ 531 (533)
T PRK07798 501 YKV---PRAIWFVDEVQRSPAGKADYRWAKEQAA 531 (533)
T ss_pred CCC---CeEEEEcccCCCCCcchhhHHHHhhhhc
Confidence 444 4455566999999999999999988754
No 127
>PRK12406 long-chain-fatty-acid--CoA ligase; Provisional
Probab=100.00 E-value=2.8e-47 Score=509.74 Aligned_cols=469 Identities=21% Similarity=0.280 Sum_probs=353.4
Q ss_pred eeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHH
Q 037878 501 NQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENIS 580 (2280)
Q Consensus 501 ~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il 580 (2280)
+.+||.||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|++++|+++..+.++ +..++
T Consensus 10 ~~~Ty~el~~~~~~la~~l~~~---g~~~g~~V~v~~~~~~~~~~~~lA~~~~G~~~v~l~~~~~~~~-------~~~~l 79 (509)
T PRK12406 10 RRRSFDELAQRAARAAGGLAAL---GVRPGDCVALLMRNDFAFFEAAYAAMRLGAYAVPVNWHFKPEE-------IAYIL 79 (509)
T ss_pred eeecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHHHHHcCeEEEecCcccCHHH-------HHHHH
Confidence 5899999999999999999998 8999999999999999999999999999999999999999888 88999
Q ss_pred hhcCCeEEEEccccchhhccCCCCCCCccccccc---c------cc-------c--cccccccccccCCCCCCCeEEEEe
Q 037878 581 KSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSW---V------KN-------S--KNLLAENVVCFTESQPDDLCFLQF 642 (2280)
Q Consensus 581 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~---~------~~-------~--~~~~~~~~~~~~~~~~~d~a~Iiy 642 (2280)
++++++.++++......+..........+..... . .. . .+.............++++++++|
T Consensus 80 ~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~i~~ 159 (509)
T PRK12406 80 EDSGARVLIAHADLLHGLASALPAGVTVLSVPTPPEIAAAYRISPALLTPPAGAIDWEGWLAQQEPYDGPPVPQPQSMIY 159 (509)
T ss_pred hccCCcEEEEccchhhhhhhhhhcccceeecccccccccccccccccccCCCCccCHHHHhcccCccCCCCCCCceEEEE
Confidence 9999999998765443321110000000000000 0 00 0 000000001122345789999999
Q ss_pred ccCCCCCceEEEEchHHH---HHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHH
Q 037878 643 TSGSTGDAKGVMITHGGL---IHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLL 719 (2280)
Q Consensus 643 TSGSTG~PKgV~~tH~~l---~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~ 719 (2280)
||||||.||||+++|.+. ..........+++.+++++++.+|++|..+.... +.++..|+++++.+. .+|..
T Consensus 160 TSGtTG~PK~v~~s~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~~-~~~~~~g~~~~~~~~----~~~~~ 234 (509)
T PRK12406 160 TSGTTGHPKGVRRAAPTPEQAAAAEQMRALIYGLKPGIRALLTGPLYHSAPNAYG-LRAGRLGGVLVLQPR----FDPEE 234 (509)
T ss_pred CCCCCCCCceEEEechhHHHHHHHHHhhhhhcCCCCCceEEEEeCCcccchHHHH-HHHHhhheEEEEccC----CCHHH
Confidence 999999999999976653 3434445567788999999999999999886544 446778888887653 38999
Q ss_pred HHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCc
Q 037878 720 WLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGL 799 (2280)
Q Consensus 720 l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~ 799 (2280)
+++.++++++|++..+|+++..+++...... ...+++++|.+++||+++++++.+++.+.+ ++.+++.||+
T Consensus 235 ~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~---~~~~~~~l~~v~~gg~~~~~~~~~~~~~~~------~~~~~~~YG~ 305 (509)
T PRK12406 235 LLQLIERHRITHMHMVPTMFIRLLKLPEEVR---AKYDVSSLRHVIHAAAPCPADVKRAMIEWW------GPVIYEYYGS 305 (509)
T ss_pred HHHHHHHcCCeEEEccHHHHHHHHhCchhhc---ccCCCCceeEEEEcCCCCCHHHHHHHHHHc------CCcEEeeccc
Confidence 9999999999999999999988765332211 225678999999999999999999998864 4569999999
Q ss_pred cccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCccc-ccCCCchhhHH
Q 037878 800 AENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGI-GYWGREELSQI 878 (2280)
Q Consensus 800 TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~-GY~~~p~~t~~ 878 (2280)
||++.+++..... .....+++|.|+++++++|+|+++ ..++.|+.|||+++|++++. ||+++|+.+++
T Consensus 306 tE~~~~~~~~~~~---------~~~~~~~~G~~~~~~~~~i~d~~~--~~~~~g~~Gel~v~~~~~~~~~y~~~~~~~~~ 374 (509)
T PRK12406 306 TESGAVTFATSED---------ALSHPGTVGKAAPGAELRFVDEDG--RPLPQGEIGEIYSRIAGNPDFTYHNKPEKRAE 374 (509)
T ss_pred cccCceEecCccc---------ccccCCCcCccCCCcEEEEECCCC--CCCCCCCceEEEEECCccccccccCCchhccc
Confidence 9998765432111 011236789999999999999764 44579999999999999875 99999998876
Q ss_pred HHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccc
Q 037878 879 TFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTK 957 (2280)
Q Consensus 879 ~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~ 957 (2280)
.+. ++||+|||+++++ ||.++++||.||+||++|+||+|.|||++|+++++|.+ +++++.+++..+
T Consensus 375 ~~~--------~~~~~TGD~~~~~~~g~~~~~GR~~d~ik~~G~~v~~~~IE~~l~~~~~v~~---~~v~~~~~~~~~-- 441 (509)
T PRK12406 375 IDR--------GGFITSGDVGYLDADGYLFLCDRKRDMVISGGVNIYPAEIEAVLHAVPGVHD---CAVFGIPDAEFG-- 441 (509)
T ss_pred ccC--------CCCeEEccEEEEcCCceEEEeecccceEEECCEEECHHHHHHHHHhCCCeeE---EEEEeeeccccC--
Confidence 542 4899999999996 99999999999999999999999999999999999875 788877654321
Q ss_pred cccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhh
Q 037878 958 GISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 958 ~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
.. .+++++..++.. ..+++.+.+++++.+ ++.| ..++.+++||+|.+||++|++|++.+.
T Consensus 442 --------~~--~~~~v~~~~~~~~~~~~l~~~l~~~l~~-~~~P---~~i~~~~~iP~t~~GK~~r~~L~~~~~ 502 (509)
T PRK12406 442 --------EA--LMAVVEPQPGATLDEADIRAQLKARLAG-YKVP---KHIEIMAELPREDSGKIFKRRLRDPYW 502 (509)
T ss_pred --------ce--eEEEEEECCCCCCCHHHHHHHHHHhccc-CCCC---cEEEEeccCCCCCccchhHHHHHHHHH
Confidence 11 222222232222 224566666666554 4444 445556999999999999999988764
No 128
>PRK09029 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=1.9e-47 Score=504.02 Aligned_cols=444 Identities=18% Similarity=0.235 Sum_probs=347.5
Q ss_pred HhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCC
Q 037878 476 KHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKV 555 (2280)
Q Consensus 476 ~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa 555 (2280)
+.++++. |+++|+... + +.+||+||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|+
T Consensus 10 ~~~a~~~--~~~~a~~~~---~---~~~ty~el~~~~~~~a~~L~~~---g~~~~~~v~l~~~~~~~~~~~~la~~~~G~ 78 (458)
T PRK09029 10 RHWAQVR--PQAIALRLN---D---EVLTWQQLCARIDQLAAGFAQQ---GVVEGSGVALRGKNSPETLLAYLALLQCGA 78 (458)
T ss_pred HHHHHhC--CCceeeecC---C---cceeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEecCCCHHHHHHHHHHHHcCC
Confidence 4556553 789998642 1 5799999999999999999998 899999999999999999999999999999
Q ss_pred eEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccCCCCCC
Q 037878 556 LPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFTESQPD 635 (2280)
Q Consensus 556 ~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 635 (2280)
+++|+++..+.++ +..++++++++.++++.+... .. ........ . ..........++
T Consensus 79 ~~v~~~~~~~~~~-------~~~~~~~~~~~~~i~~~~~~~-~~-----~~~~~~~~----~------~~~~~~~~~~~~ 135 (458)
T PRK09029 79 RVLPLNPQLPQPL-------LEELLPSLTLDFALVLEGENT-FS-----ALTSLHLQ----L------VEGAHAVAWQPQ 135 (458)
T ss_pred EEeecCCCCCHHH-------HHHHHHhcCCCEEEEcCcccc-hh-----hccccccc----c------ccccCcccCCCC
Confidence 9999999999888 788999999999998755321 10 00000000 0 000112234678
Q ss_pred CeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCcccccc
Q 037878 636 DLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIK 715 (2280)
Q Consensus 636 d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~ 715 (2280)
++++++|||||||.||||++||++++..+......++..++++++..+|++|.+++ ..++.++..|+++++.+.
T Consensus 136 ~~a~i~~TSGTTG~PKgv~~s~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~h~~g~-~~~~~~l~~G~~v~~~~~----- 209 (458)
T PRK09029 136 RLATMTLTSGSTGLPKAAVHTAQAHLASAEGVLSLMPFTAQDSWLLSLPLFHVSGQ-GIVWRWLYAGATLVVRDK----- 209 (458)
T ss_pred CeEEEEECCCCCCCCCEEEEeHHHHHHHHHHHhhcCCCCccceEEEecCcHhhhhh-HHHHHHHhCCceEEeCCh-----
Confidence 99999999999999999999999999998888888899999999999999999997 456778999999887542
Q ss_pred CHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCccccc
Q 037878 716 NPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAP 795 (2280)
Q Consensus 716 ~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n 795 (2280)
..+++.+ .++|....+|+++..+...... ..++|.+++||+++++++.+++.+. +..+++
T Consensus 210 --~~~~~~i--~~~t~~~~~P~~~~~l~~~~~~---------~~~l~~i~~gG~~~~~~~~~~~~~~-------g~~~~~ 269 (458)
T PRK09029 210 --QPLEQAL--AGCTHASLVPTQLWRLLDNRSE---------PLSLKAVLLGGAAIPVELTEQAEQQ-------GIRCWC 269 (458)
T ss_pred --HHHHHHH--hhceeeecChHHHHHHHhcccc---------CCcceEEEECCCCCCHHHHHHHHHc-------CCcEec
Confidence 3355665 3788888889988777643211 3479999999999999998888652 467999
Q ss_pred ccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchh
Q 037878 796 GYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREEL 875 (2280)
Q Consensus 796 ~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~ 875 (2280)
.||+||++...+..... ...++|+|+++++++|+| |||+|+|+.++.||+++|+.
T Consensus 270 ~YG~tE~~~~~~~~~~~------------~~~~~G~~~~~~~~~i~~-------------gel~v~g~~~~~gY~~~~~~ 324 (458)
T PRK09029 270 GYGLTEMASTVCAKRAD------------GLAGVGSPLPGREVKLVD-------------GEIWLRGASLALGYWRQGQL 324 (458)
T ss_pred cccccccCcceeccCCC------------CCCCCCCCCCCCEEEEeC-------------CEEEEecCceeeeeecCccc
Confidence 99999998654432111 013489999999999875 89999999999999999987
Q ss_pred hHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccc
Q 037878 876 SQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLS 955 (2280)
Q Consensus 876 t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~ 955 (2280)
+... .+++||+|||+|+++||.++|+||+||+||++|+||+|.|||++|.++|+|.+ |+|++.+++..+
T Consensus 325 ~~~~--------~~~~~~~TGD~~~~~~g~l~~~gR~~d~i~~~G~~v~p~eiE~~l~~~~~v~~---~~v~~~~~~~~~ 393 (458)
T PRK09029 325 VPLV--------NDEGWFATRDRGEWQNGELTILGRLDNLFFSGGEGIQPEEIERVINQHPLVQQ---VFVVPVADAEFG 393 (458)
T ss_pred cccc--------cCCCccCCCCcEEEeCCEEEEecccccceeeCCEEeCHHHHHHHHhcCCCcce---EEEEccCCcccC
Confidence 7532 23589999999999999999999999999999999999999999999999865 888888776433
Q ss_pred cccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 956 TKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 956 ~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+...+++.. . ......++.+.++++++. ++.| ..++.++++|+|.+||++|+.|++++.+
T Consensus 394 ----------~~~~a~v~~--~-~~~~~~~l~~~~~~~l~~-~~~P---~~~~~~~~~p~t~~gKi~r~~L~~~~~~ 453 (458)
T PRK09029 394 ----------QRPVAVVES--D-SEAAVVNLAEWLQDKLAR-FQQP---VAYYLLPPELKNGGIKISRQALKEWVAQ 453 (458)
T ss_pred ----------ceEEEEEEc--C-cccCHHHHHHHHHhhchh-ccCC---eEEEEecccccCcCCCcCHHHHHHHHHh
Confidence 222233222 2 122335667777776664 4444 4455568899999999999999887653
No 129
>PRK08162 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.1e-46 Score=508.26 Aligned_cols=500 Identities=20% Similarity=0.231 Sum_probs=359.4
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.+..++++..++. +|+++|+.+.+ +.+||+||.++++++|+.|.+. |+++||+|+++++|++++++++|
T Consensus 18 ~~~~~~~~~~~~~--~~~~~a~~~~~------~~~ty~~L~~~~~~~a~~L~~~---g~~~g~~v~i~~~~~~~~~~~~l 86 (545)
T PRK08162 18 LTPLSFLERAAEV--YPDRPAVIHGD------RRRTWAETYARCRRLASALARR---GIGRGDTVAVLLPNIPAMVEAHF 86 (545)
T ss_pred CCHHHHHHHHHHH--CCCCeEEEECC------eEEEHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCchHHHHHHH
Confidence 3566778777765 48999987632 4799999999999999999988 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCC--CCccccccc-c------c-
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPN--LPWLHTDSW-V------K- 616 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~--~~~~~~~~~-~------~- 616 (2280)
||+++|++++|+++..+.++ +..++++++++.++++.+....+... ..+. ...+..... . .
T Consensus 87 A~~~~G~~~vpl~~~~~~~~-------~~~~l~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (545)
T PRK08162 87 GVPMAGAVLNTLNTRLDAAS-------IAFMLRHGEAKVLIVDTEFAEVAREALALLPGPKPLVIDVDDPEYPGGRFIGA 159 (545)
T ss_pred HHHHhCcEEeccccccChHH-------HHHHHHhCCCeEEEEccchhhHHHHHHhhCCCCceEEEecCccccccCCCccc
Confidence 99999999999999999888 88999999999999987654332210 0000 000000000 0 0
Q ss_pred -cccccccc--cc-cccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHH
Q 037878 617 -NSKNLLAE--NV-VCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLI 692 (2280)
Q Consensus 617 -~~~~~~~~--~~-~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~ 692 (2280)
........ .. ....+.+.+++++|+|||||||.||||+++|+++...+......+.+..++++++.+|++|..++.
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~l~~~pl~h~~~~~ 239 (545)
T PRK08162 160 LDYEAFLASGDPDFAWTLPADEWDAIALNYTSGTTGNPKGVVYHHRGAYLNALSNILAWGMPKHPVYLWTLPMFHCNGWC 239 (545)
T ss_pred ccHHHHhccCCccccccCCCCCCCeEEEEeCCCCCCCCcEEEEecHHHHHHHHHHHHhcCCCCCCeeEeccCcHhhhhHH
Confidence 00000000 00 001122345799999999999999999999999877766666667788889999999999999876
Q ss_pred HHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCC
Q 037878 693 GGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVR 772 (2280)
Q Consensus 693 ~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~ 772 (2280)
..++..+. |+++++... .+|..+++.++++++|++.++|.++..+++...... ..+.+.+.++++|++++
T Consensus 240 ~~~~~~~~-~g~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~~l~~~~~~~~-----~~~~~~~~~~~~g~~~~ 309 (545)
T PRK08162 240 FPWTVAAR-AGTNVCLRK----VDPKLIFDLIREHGVTHYCGAPIVLSALINAPAEWR-----AGIDHPVHAMVAGAAPP 309 (545)
T ss_pred HHHHHHHH-ccEEEEeCC----CCHHHHHHHHHHcCCeEEEechHHHHHHHhCccccc-----cCCccceEEEECCCCCC
Confidence 55555554 445444432 389999999999999999999999998875432211 23445677789999999
Q ss_pred HHHHHHHHHHhcCCCCCCcccccccCccccccceeccc-CCCCceeecCCCceeeccccCCCC-CceEEEEcCCCCcccC
Q 037878 773 QTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAY-GQGKPIILDWQGRVCCGYVDQNDP-DVDIRIVNPETSEEIG 850 (2280)
Q Consensus 773 ~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~-~~~~~~~~~~~g~~~~g~vG~p~p-g~~v~Ivd~~~~~~~~ 850 (2280)
+++.+++.+. ++++++.||+||++..++... ................+.+|.+.+ +..++|+|++++..+.
T Consensus 310 ~~~~~~~~~~-------~~~~~~~YG~tE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~i~d~~~~~~~~ 382 (545)
T PRK08162 310 AAVIAKMEEI-------GFDLTHVYGLTETYGPATVCAWQPEWDALPLDERAQLKARQGVRYPLQEGVTVLDPDTMQPVP 382 (545)
T ss_pred HHHHHHHHHh-------CCceeecccccccCcceeecccccccccCCccchhhccCCCCcccCCcceEEEEcCCCCcccC
Confidence 9998887653 467999999999864433321 110000000000111234555554 3468899976554443
Q ss_pred CCC-CeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHH
Q 037878 851 EPG-KEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADV 928 (2280)
Q Consensus 851 p~G-~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EI 928 (2280)
+.| +.|||+|+|+.++.||+++++.|++.|. ++||+|||+++++ ||.++|+||.||+||++|+||+|.||
T Consensus 383 ~~g~~~Gel~v~g~~~~~gY~~~~~~~~~~~~--------~g~~~TGDl~~~d~dg~l~~~GR~~~~i~~~G~~v~~~eI 454 (545)
T PRK08162 383 ADGETIGEIMFRGNIVMKGYLKNPKATEEAFA--------GGWFHTGDLAVLHPDGYIKIKDRSKDIIISGGENISSIEV 454 (545)
T ss_pred CCCCceeEEEEecCcchhhhcCChhhhHHHhh--------CCCcccCceEEEcCCccEEEEecccceEEeCCEEECHHHH
Confidence 334 4699999999999999999999999985 3799999999997 99999999999999999999999999
Q ss_pred HHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEE
Q 037878 929 EKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKL 1007 (2280)
Q Consensus 929 E~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~l 1007 (2280)
|++|.++|+|.+ ++|++.+++..+ .....++. ..++. ....++.+.+++.++. ++.|.. +
T Consensus 455 E~~l~~~~~v~~---~~vv~~~~~~~~----------~~~~~~v~--~~~~~~~~~~~l~~~~~~~l~~-~~~P~~---~ 515 (545)
T PRK08162 455 EDVLYRHPAVLV---AAVVAKPDPKWG----------EVPCAFVE--LKDGASATEEEIIAHCREHLAG-FKVPKA---V 515 (545)
T ss_pred HHHHHhCCcccE---EEEEeeeccccC----------ceEEEEEE--eCCCCCCCHHHHHHHHHHhccc-ccCCcE---E
Confidence 999999999865 888887654321 12222222 23222 2335667777776643 555533 3
Q ss_pred ecCCCccCCCCcccchHHHHHHhh
Q 037878 1008 IKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 1008 v~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
+ .++||+|+|||++|+.|++++.
T Consensus 516 ~-~~~iP~t~~gK~~r~~l~~~~~ 538 (545)
T PRK08162 516 V-FGELPKTSTGKIQKFVLREQAK 538 (545)
T ss_pred E-ecccCCCCCcCCcHHHHHHHHh
Confidence 2 2579999999999999988754
No 130
>TIGR01923 menE O-succinylbenzoate-CoA ligase. This model represents an enzyme, O-succinylbenzoate-CoA ligase, which is involved in the fourth step of the menaquinone biosynthesis pathway. O-succinylbenzoate-CoA ligase, together with menB - naphtoate synthase, take 2-succinylbenzoate and convert it into 1,4-di-hydroxy-2- naphtoate.
Probab=100.00 E-value=7.1e-46 Score=486.64 Aligned_cols=434 Identities=19% Similarity=0.237 Sum_probs=337.9
Q ss_pred cHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhc
Q 037878 504 TYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSC 583 (2280)
Q Consensus 504 TY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~ 583 (2280)
||+||.++++++|+.|.+. |+++||+|+++++|+++++++++||+++|++++|+++..+.++ +..+++++
T Consensus 1 Ty~~l~~~~~~~a~~l~~~---g~~~gd~v~i~~~~~~~~~~~~la~~~~G~~~~~~~~~~~~~~-------~~~~~~~~ 70 (436)
T TIGR01923 1 TWQDLDCEAAHLAKALKAQ---GIRSGSRVALVGQNSIEMVLLLHACLLLGAEIAMLNTRLTENE-------RTNQLEDL 70 (436)
T ss_pred CHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCCHHHHHHHHHHHhcCcEEEecCcCCCHHH-------HHHHHHhc
Confidence 8999999999999999998 9999999999999999999999999999999999999999887 78899999
Q ss_pred CCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHH
Q 037878 584 GAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHN 663 (2280)
Q Consensus 584 ~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~ 663 (2280)
+++.++++....... .......... ...............+++++++|||||||.||+|+++|+++...
T Consensus 71 ~~~~~i~~~~~~~~~-------~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~i~~TSGtTG~PK~v~~s~~~~~~~ 139 (436)
T TIGR01923 71 DVQLLLTDSLLEEKD-------FQADSLDRIE----AAGRYETSLSASFNMDQIATLMFTSGTTGKPKAVPHTFRNHYAS 139 (436)
T ss_pred CCCEEEEcCcccccc-------eeecchHhhh----hcccccccccccCCcCceEEEEeCCCCCCCCcEEEEehHHHHHH
Confidence 999999976532110 0000000000 00000001122345689999999999999999999999999999
Q ss_pred HHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHH
Q 037878 664 VKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMV 743 (2280)
Q Consensus 664 ~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~ 743 (2280)
+......+++.++|++++.+|++|..++ ..++.++..|+++++.++. ..+++.++++++|++.++|+++..+.
T Consensus 140 ~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~l~~g~~~~~~~~~------~~~~~~l~~~~~t~~~~~P~~l~~l~ 212 (436)
T TIGR01923 140 AVGSKENLGFTEDDNWLLSLPLYHISGL-SILFRWLIEGATLRIVDKF------NQLLEMIANERVTHISLVPTQLNRLL 212 (436)
T ss_pred HHHHHhhcCCCCCceEEEccCcHhHHHH-HHHHHHHhcCceEEecchH------HHHHHHHHHhCCeEEEeHHHHHHHHH
Confidence 9888888999999999999999999887 4688999999999886542 37899999999999999999988776
Q ss_pred HHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCc
Q 037878 744 RRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGR 823 (2280)
Q Consensus 744 ~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~ 823 (2280)
+... ..+++|.+++|||++++++.+++.+. ++.++|.||+||++..++....... .
T Consensus 213 ~~~~---------~~~~l~~~~~~G~~~~~~~~~~~~~~-------~~~~~~~YG~tE~~~~~~~~~~~~~--------~ 268 (436)
T TIGR01923 213 DEGG---------HNENLRKILLGGSAIPAPLIEEAQQY-------GLPIYLSYGMTETCSQVTTATPEML--------H 268 (436)
T ss_pred hCcC---------CCCceEEEEECCCCCCHHHHHHHHHh-------CCceeeEecCCccchhccCcCcccc--------c
Confidence 4311 12679999999999999998887653 5679999999999875543321110 0
Q ss_pred eeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-
Q 037878 824 VCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII- 902 (2280)
Q Consensus 824 ~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~- 902 (2280)
.. ..+|.|+++++++|.+++ .++.|||+++|+.++.||+++++.+...+. ++||+|||+++++
T Consensus 269 ~~-~~~G~~~~~~~~~i~~~~-------~~~~Gel~v~~~~~~~gy~~~~~~~~~~~~--------~~~~~TGD~~~~~~ 332 (436)
T TIGR01923 269 AR-PDVGRPLAGREIKIKVDN-------KEGHGEIMVKGANLMKGYLYQGELTPAFEQ--------QGWFNTGDIGELDG 332 (436)
T ss_pred cc-cCCCccCCCcEEEEEeCC-------CCCceEEEEECCccchhhCCChhhhhhhhc--------CCCeeccceEEEcC
Confidence 11 237899999999994322 126799999999999999998887766542 4899999999997
Q ss_pred CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC
Q 037878 903 DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV 982 (2280)
Q Consensus 903 dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~ 982 (2280)
||.+++.||.||+||++|++|+|.|||++|.+++.|.+ ++|++.+++..+ ....+++.. .+ ...
T Consensus 333 dg~~~~~GR~~d~i~~~G~~v~~~~iE~~l~~~~~v~~---~~v~~~~~~~~~----------~~~~~~v~~--~~-~~~ 396 (436)
T TIGR01923 333 EGFLYVLGRRDDLIISGGENIYPEEIETVLYQHPGIQE---AVVVPKPDAEWG----------QVPVAYIVS--ES-DIS 396 (436)
T ss_pred CCCEEEeccccCeEEeCCEeeCHHHHHHHHHhCCCeeE---EEEeCCcchhcC----------CeeEEEEEE--CC-CCC
Confidence 89999999999999999999999999999999998865 777776543221 222222222 22 223
Q ss_pred CHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHH
Q 037878 983 DKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFE 1025 (2280)
Q Consensus 983 ~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~ 1025 (2280)
..++.+.+++.++. +++| ..++.+++||+|++||++|++
T Consensus 397 ~~~l~~~l~~~l~~-~~~p---~~i~~~~~iP~t~~GK~~r~~ 435 (436)
T TIGR01923 397 QAKLIAYLTEKLAK-YKVP---IAFEKLDELPYNASGKILRNQ 435 (436)
T ss_pred HHHHHHHHHHhhhC-CCCC---eEEEEecCCCCCCCCceeccc
Confidence 35667777777654 4544 344556999999999999975
No 131
>PRK08308 acyl-CoA synthetase; Validated
Probab=100.00 E-value=1.5e-45 Score=478.85 Aligned_cols=399 Identities=18% Similarity=0.226 Sum_probs=323.9
Q ss_pred eeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHH
Q 037878 501 NQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENIS 580 (2280)
Q Consensus 501 ~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il 580 (2280)
+++||+||.++++++|+.|. . |+++|++|+++++|+++++++++||+++|++++|++++.+.++ +..++
T Consensus 7 ~~~ty~el~~~~~~~a~~l~-~---~~~~g~~V~i~~~~~~~~~~~~la~~~~G~~~v~l~~~~~~~~-------~~~~~ 75 (414)
T PRK08308 7 EEYSKSDFDLRLQRYEEMEQ-F---QEAAGNRFAVCLKDPFDIITLVFFLKEKGASVLPIHPDTPKEA-------AIRMA 75 (414)
T ss_pred ceecHHHHHHHHHHHHHHHH-c---CCCCCCEEEEECCCChHHHHHHHHHHHCCeEEEecCCCCCHHH-------HHHHH
Confidence 47999999999999999985 4 7999999999999999999999999999999999999999887 78889
Q ss_pred hhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHH
Q 037878 581 KSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGL 660 (2280)
Q Consensus 581 ~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l 660 (2280)
++++++.++++.... .. . ......++++++|+|||||||.||||++||+++
T Consensus 76 ~~~~~~~~i~~~~~~-----------~~-------~-----------~~~~~~~~~~~~i~~TSGtTG~PKgv~~s~~~l 126 (414)
T PRK08308 76 KRAGCHGLLYGESDF-----------TK-------L-----------EAVNYLAEEPSLLQYSSGTTGEPKLIRRSWTEI 126 (414)
T ss_pred HhCCCCEEEecCccc-----------cc-------c-----------cCCCCCCCCceEEEECCCCCCCCcEEEEehHhH
Confidence 999999999864210 00 0 001235689999999999999999999999999
Q ss_pred HHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHH
Q 037878 661 IHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFE 740 (2280)
Q Consensus 661 ~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~ 740 (2280)
.+.+......+....+++.+..+|++|.++++..++.++..|+++++.+. .+|..+++.++++++|++.++|.++.
T Consensus 127 ~~~~~~~~~~~~~~~~~~~~~~~p~~h~~g~~~~~~~~l~~G~~~~~~~~----~~~~~~~~~l~~~~~t~~~~~P~~~~ 202 (414)
T PRK08308 127 DREIEAYNEALNCEQDETPIVACPVTHSYGLICGVLAALTRGSKPVIITN----KNPKFALNILRNTPQHILYAVPLMLH 202 (414)
T ss_pred HHHHHHHHHhhCCCcccEEEEecCcHHHHHHHHHHHHHHHcCCEEEecCC----CCHHHHHHHHHHhCCeEEEcCHHHHH
Confidence 99998888888889999999999999999998889999999999988753 37899999999999999999999998
Q ss_pred HHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecC
Q 037878 741 LMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDW 820 (2280)
Q Consensus 741 ~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~ 820 (2280)
.+.+.... ..+++.+++||+++++++.++|.+. ..+++|.||+||++.++....
T Consensus 203 ~l~~~~~~---------~~~l~~~~~~G~~l~~~~~~~~~~~-------~~~~~~~YG~tE~~~~~~~~~---------- 256 (414)
T PRK08308 203 ILGRLLPG---------TFQFHAVMTSGTPLPEAWFYKLRER-------TTYMMQQYGCSEAGCVSICPD---------- 256 (414)
T ss_pred HHHhcCCc---------cccccEEEEccCCCCHHHHHHHHHh-------CChhhhccCccccCCeeecCC----------
Confidence 88653211 1368899999999999999999875 247999999999985433111
Q ss_pred CCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEE
Q 037878 821 QGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGR 900 (2280)
Q Consensus 821 ~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr 900 (2280)
....+++|+|+|++++++.++ .|+.|||++++. ++||+|||+|+
T Consensus 257 --~~~~~~~G~p~~~~~~~~~~~--------~~~~gel~v~~~--------------------------~~~~~TGDl~~ 300 (414)
T PRK08308 257 --MKSHLDLGNPLPHVSVSAGSD--------ENAPEEIVVKMG--------------------------DKEIFTKDLGY 300 (414)
T ss_pred --CCCCCccCccCCCeEEEEecC--------CCCCceEEEEcC--------------------------CceEECCceEE
Confidence 012356899999999998763 356799999741 37999999999
Q ss_pred EE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCC
Q 037878 901 II-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDG 979 (2280)
Q Consensus 901 ~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~ 979 (2280)
++ ||.++|+||.||+||++|+||+|.|||++|.++|+|.+ |+|++.+++..+ +.+.++++ ..+
T Consensus 301 ~~~dg~l~~~GR~~~~ik~~G~~v~p~eIE~~l~~~~~v~~---a~v~~~~~~~~~----------~~~~~~v~--~~~- 364 (414)
T PRK08308 301 KSERGTLHFMGRMDDVINVSGLNVYPIEVEDVMLRLPGVQE---AVVYRGKDPVAG----------ERVKAKVI--SHE- 364 (414)
T ss_pred ECCCccEEEecccCCeEEECCEEECHHHHHHHHHhCCCeeE---EEEEeccCCCCC----------ceEEEEEE--eCC-
Confidence 97 99999999999999999999999999999999999865 788887765322 22222222 122
Q ss_pred CCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHH
Q 037878 980 KPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFE 1025 (2280)
Q Consensus 980 ~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~ 1025 (2280)
.....++.++++++++. +++| ..++.+++||+|++||+||+.
T Consensus 365 ~~~~~~l~~~l~~~l~~-~~~P---~~i~~v~~iP~t~~GKi~r~~ 406 (414)
T PRK08308 365 EIDPVQLREWCIQHLAP-YQVP---HEIESVTEIPKNANGKVSRKL 406 (414)
T ss_pred CCCHHHHHHHHHHhCcc-ccCC---cEEEEeccCCCCCCcCeehhh
Confidence 22335666777777664 4444 445556999999999999984
No 132
>PF00501 AMP-binding: AMP-binding enzyme; InterPro: IPR000873 A number of prokaryotic and eukaryotic enzymes, which appear to act via an ATP-dependent covalent binding of AMP to their substrate, share a region of sequence similarity [, , ]. This region is a Ser/Thr/Gly-rich domain that is further characterised by a conserved Pro-Lys-Gly triplet. The family of enzymes includes luciferase, long chain fatty acid Co-A ligase, acetyl-CoA synthetase and various other closely-related synthetases.; GO: 0003824 catalytic activity, 0008152 metabolic process; PDB: 2V7B_A 2Y4O_B 2VSQ_A 3L8C_B 1RY2_A 3KXW_A 3LNV_A 3ETC_B 3A9U_A 3A9V_A ....
Probab=100.00 E-value=1.8e-45 Score=479.89 Aligned_cols=403 Identities=28% Similarity=0.442 Sum_probs=310.5
Q ss_pred HHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcC
Q 037878 475 LKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAK 554 (2280)
Q Consensus 475 l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aG 554 (2280)
|+++|++ .||++|+++ + + .+.+||+||+++++++|..|++. |+++||+|+++++|+++++++++||+++|
T Consensus 1 f~~~a~~--~pd~~a~~~-~-~---~~~~Ty~~l~~~v~~la~~L~~~---g~~~~~~V~i~~~n~~~~~~~~~A~~~~G 70 (417)
T PF00501_consen 1 FERQAQR--YPDRIALID-D-E---GRSLTYKQLYERVRKLAAALRKL---GVKKGDRVAILLPNSIEFVVAFLACLRAG 70 (417)
T ss_dssp HHHHHHH--STTSEEEEE-T-T---TEEEEHHHHHHHHHHHHHHHHHT---TSSTTSEEEEEESSSHHHHHHHHHHHHTT
T ss_pred ChhHHhh--CCCceEEEE-C-C---CEEEEHHHHHHHHHHHhhHHHHh---CCCccccccccCCccceeeeeeccccccc
Confidence 4566666 489999987 2 1 26899999999999999999987 99999999999999999999999999999
Q ss_pred CeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEE----ccccchhhccC-CC--CCCCccccc--ccccccccccccc
Q 037878 555 VLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILS----TIGYHSAVRVG-SW--PNLPWLHTD--SWVKNSKNLLAEN 625 (2280)
Q Consensus 555 a~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~----~~~~~~~~~~~-~~--~~~~~~~~~--~~~~~~~~~~~~~ 625 (2280)
++++|+++..+.+. +.+++++++++++++ +......+... .. .......++ .............
T Consensus 71 ~~~v~l~~~~~~~~-------~~~~l~~~~~~~ii~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 143 (417)
T PF00501_consen 71 AIPVPLDPSLSEDE-------LRHILRQSGPKVIITSEAVDSEPLKKLKSIFKQEDPSSSIIILDRDDLPKKEALKSASL 143 (417)
T ss_dssp -EEEEEETTSSHHH-------HHHHHHHHTESEEEECHHHSCHHHHHHHHHHTTSTTTEEEEEESHSSCTTCHHHHHHHH
T ss_pred cccccccccccccc-------ccccccccceeEEEEeccccccccccchhhhcccccccccccccccccccccccccccc
Confidence 99999999998877 889999999999997 11111101000 00 000011111 1100000000000
Q ss_pred ccccCC--CCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHH--HHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHc
Q 037878 626 VVCFTE--SQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMR--KRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVG 701 (2280)
Q Consensus 626 ~~~~~~--~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~--~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~ 701 (2280)
...... ..++++++|+|||||||.||+|.++|+++++.+.... ..++.+ |++++++|++|.++++..++.++..
T Consensus 144 ~~~~~~~~~~~~~~~~i~~TSGTTG~pK~v~~t~~~~~~~~~~~~~~~~~~~~--d~~l~~~p~~~~~g~~~~~~~~l~~ 221 (417)
T PF00501_consen 144 SDEPQSPEDSPDDPAFILFTSGTTGKPKGVVLTHRNLLAQARALALPEYFGLG--DRILSFLPLSHIFGLISALLAALFS 221 (417)
T ss_dssp CHCSHSTTHTTTSEEEEEEESSSSSSEEEEEEEHHHHHHHHHHHHHHHTTTTT--TEEEESS-TTSHHHHHHHHHHHHHC
T ss_pred ccccccCCCCccceeEeeccccccccccccccccccccccccccccccccccC--ceEEeeccccccccccccccccccc
Confidence 000000 1579999999999999999999999999999887764 223333 5999999999999998899999999
Q ss_pred cceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHH
Q 037878 702 GSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVE 781 (2280)
Q Consensus 702 G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~ 781 (2280)
|+++++++.... .++..+++.++++++|++.++|.++..+++..+.. ......+++++|.+++||+++++++.+++.+
T Consensus 222 G~~~~~~~~~~~-~~~~~~~~~i~~~~~t~~~~~p~~l~~l~~~~~~~-~~~~~~~l~~lr~v~~~G~~l~~~~~~~~~~ 299 (417)
T PF00501_consen 222 GATLVLPSPFDL-FDPESLLELISRYKPTILFAVPSMLEALLQSPEEK-TKISKKDLSSLRTVISGGEPLPPDLLRRLRK 299 (417)
T ss_dssp TSEEEEESSHHH-HHHHHHHHHHHHHTESEEEEEHHHHHHHHHHHHTT-HHGTTTTGTT-SEEEEESST-CHHHHHHHHH
T ss_pred cccccccccccc-cccccchhccccccccccccccccccccccccccc-ccccccccccccccccccccCChhhcccccc
Confidence 999999886543 34778999999999999999999999998733222 1111246889999999999999999999999
Q ss_pred HhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEc
Q 037878 782 LTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWIS 861 (2280)
Q Consensus 782 ~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~ 861 (2280)
.+. ...+.+.||+||++.+++....... ....+++|.|+|+++++|+|++++..+ +.|+.|||+|+
T Consensus 300 ~~~-----~~~i~~~YG~tE~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~ivd~~~~~~~-~~g~~Gei~i~ 365 (417)
T PF00501_consen 300 AFG-----NAPIINLYGSTETGSIATIRPPEDD--------IEKPGSVGKPLPGVEVKIVDPNTGEPL-PPGEPGEIVIR 365 (417)
T ss_dssp HHT-----TSEEEEEEEEGGGSSEEEEEETTTH--------HSSTTSEBEESTTEEEEEECTTTSSBE-STTSEEEEEEE
T ss_pred ccc-----cccceecccccccceeeeccccccc--------ccccccccccccccccccccccccccc-ccccccccccc
Confidence 873 2589999999999988765421110 112467899999999999999865444 79999999999
Q ss_pred CCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEEC
Q 037878 862 SPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVA 919 (2280)
Q Consensus 862 Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~ 919 (2280)
||.++.||+++|+.|+++|.+ +|||||||+|+++ ||.++++||+||+||+|
T Consensus 366 ~~~~~~gy~~~~~~~~~~~~~-------~~~~~TGD~g~~d~~G~~~~~GR~~~~i~~~ 417 (417)
T PF00501_consen 366 GPNVFSGYYNDPELTAEAFID-------DGWYRTGDLGRLDEDGYLYILGRSDDMIKVR 417 (417)
T ss_dssp STTSBSEETTBHHHHHHHEET-------TSEEEEEEEEEEETTSEEEEEEEGSCEEEET
T ss_pred CCccceeeecccccccccccc-------ccceecceEEEECCCCeEEEEEeeCCEEEeC
Confidence 999999999999999999964 4799999999998 99999999999999986
No 133
>TIGR01733 AA-adenyl-dom amino acid adenylation domain. This domain is a subset of the AMP-binding domain found in Pfam (pfam00501) which also hits substrate--CoA ligases and luciferases. Sequences scoring in between trusted and noise for this model may be ambiguous as to whether they activate amino acids or other molecules lacking an alpha amino group.
Probab=100.00 E-value=6.8e-43 Score=454.33 Aligned_cols=402 Identities=22% Similarity=0.319 Sum_probs=325.8
Q ss_pred cHHHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhh
Q 037878 504 TYEELDANASRIAHKLLT-SRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKS 582 (2280)
Q Consensus 504 TY~eL~~~a~~lA~~L~~-~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~ 582 (2280)
||.||.+.++++|+.|.+ . |+++||+|+++++|+++++++++||+++|++++|+++..+.+. +..+++.
T Consensus 1 t~~~l~~~~~~~a~~l~~~~---g~~~gd~v~l~~~n~~~~~~~~~a~~~~G~~~v~~~~~~~~~~-------~~~~l~~ 70 (408)
T TIGR01733 1 TYRELDERANRLARHLRAAG---GVGPGDRVAVLLERSAELVVAILAVLKAGAAYVPLDPAYPAER-------LAFILED 70 (408)
T ss_pred CHHHHHHHHHHHHHHHHHhh---CCCCCCEEEEEeCCCHHHHHHHHHHHHhCCEEEEcCCCCCHHH-------HHHHHHh
Confidence 799999999999999998 6 8999999999999999999999999999999999999998887 8899999
Q ss_pred cCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHH
Q 037878 583 CGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIH 662 (2280)
Q Consensus 583 ~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~ 662 (2280)
++++.++++........... ......... ..... ..............++++++++|||||||.||+|.+||+++..
T Consensus 71 ~~~~~ii~~~~~~~~~~~~~-~~~~~~~~~-~~~~~-~~~~~~~~~~~~~~~~~~~~i~~TSGTtG~pK~v~~s~~~~~~ 147 (408)
T TIGR01733 71 AGARLLLTDSALASRLAGLV-LPIILVDPL-ELAAL-DDAPAPPPPDAPSGPDDLAYVIYTSGSTGRPKGVVVTHRSLVN 147 (408)
T ss_pred cCCCEEEEcCchhhhccccC-CceEEechh-hhhhc-ccccccccccCCCCCCCcEEEEEcCCCCCCCCEEEeccHHHHH
Confidence 99999999876554332211 011000000 00000 0000000011114578999999999999999999999999999
Q ss_pred HHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHH
Q 037878 663 NVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELM 742 (2280)
Q Consensus 663 ~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l 742 (2280)
.+......+...+++++++..|++|.+++ ..++.++..|+++++.++.... .+..+.+.++++++|.+.++|.+++.+
T Consensus 148 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-~~~~~~l~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~t~l~~~p~~~~~l 225 (408)
T TIGR01733 148 LLAWLARRYGLDPDDRVLQFASLSFDASV-EEIFGTLLAGATLVVPPEDEER-DAALLAALIAEHPVTVLNLTPSLLALL 225 (408)
T ss_pred HHHHHHHhcCCCCCceEEEecCCccchhH-HHHHHHHhCCCEEEEcChhhcc-CHHHHHHHHHHcCceEEEeCHHHHHHH
Confidence 99998888899999999999999999987 5789999999999987764432 578999999999999999999999998
Q ss_pred HHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCC
Q 037878 743 VRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQG 822 (2280)
Q Consensus 743 ~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g 822 (2280)
.+... .+++++|.+++||+++++++.++|.+.+ .++.+++.||+||++.+++......... ..
T Consensus 226 ~~~~~--------~~~~~l~~v~~~g~~~~~~~~~~~~~~~-----~~~~i~~~YG~tE~g~~~~~~~~~~~~~----~~ 288 (408)
T TIGR01733 226 AAALP--------PALASLRLVILGGEALTPALVDRWRARG-----PGARLINLYGPTETTVWSTATLVDADDA----PR 288 (408)
T ss_pred HHhhh--------hcccCceEEEEeCccCCHHHHHHHHHhC-----CCcEEEecccCCceEEEEEEEEcCcccc----CC
Confidence 76543 3478999999999999999999999875 2478999999999988775332111110 00
Q ss_pred ceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCC-CCCceeecCcEEEE
Q 037878 823 RVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNN-RGRKYTRTGDLGRI 901 (2280)
Q Consensus 823 ~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~-~~~~~yrTGDlgr~ 901 (2280)
. ..+++|.|+++++++|+|+++ ..++.|+.|||+|+|+.++.||+++|+.|.+.|...++.. ++.+||+|||++++
T Consensus 289 ~-~~~~~G~~~~~~~~~i~~~~~--~~~~~g~~Gel~v~~~~~~~gy~~~~~~~~~~~~~~~~~~~~~~~~~~TGDl~~~ 365 (408)
T TIGR01733 289 E-SPVPIGRPLANTRLYVLDDDL--RPVPVGVVGELYIGGPGVARGYLNRPELTAERFVPDPFAGGDGARLYRTGDLVRY 365 (408)
T ss_pred c-cccccCcccCCceEEEECCCC--CCCCCCCceEEEecCccccccccCChhhhhcceeeCCCCCCCCceEEECCceEEE
Confidence 1 257799999999999999883 4457999999999999999999999999999987643321 23359999999999
Q ss_pred E-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcC
Q 037878 902 I-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIR 940 (2280)
Q Consensus 902 ~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~ 940 (2280)
+ ||.+++.||.||+||++|++|+|.|||++|.++++|.+
T Consensus 366 d~~g~~~~~gR~~~~i~~~G~~v~~~~ie~~l~~~~~v~~ 405 (408)
T TIGR01733 366 LPDGNLEFLGRIDDQVKIRGYRIELGEIEAALLRHPGVRE 405 (408)
T ss_pred cCCCCEEEeeccCCEEEeCeEEechHHHHHHHhcCcchhh
Confidence 7 99999999999999999999999999999999998864
No 134
>COG1020 EntF Non-ribosomal peptide synthetase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=100.00 E-value=1.7e-40 Score=456.43 Aligned_cols=419 Identities=21% Similarity=0.269 Sum_probs=338.5
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
.+...++++.+...+... |++.|+.+.+ .++||+||+.+++++|+.|.+. |++++++|+++++++.+++
T Consensus 223 ~~~~~~i~~~f~~~a~~~--p~~~a~~~~~------~~lty~el~~~a~~la~~l~~~---g~~~~~~V~i~~~rs~~~i 291 (642)
T COG1020 223 IPLRLTIHLLFEEQAATT--PDAVALVRGG------QQLTYAELDARANRLARLLISL---GVGPGETVAILADRSLELV 291 (642)
T ss_pred CCccchHHHHHHHHHHhC--CCceeEecCC------CcccHHHHHHHHHHHHHHHHHc---CCCCCCeEEEEcCCCHHHH
Confidence 344567899998888774 7887776542 5899999999999999999998 8999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccc
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAE 624 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (2280)
++++|++|+|++|||+|+.+|.+| +..+++++++..+++......... ..+.+..+..... ...
T Consensus 292 ~~~l~ilkaG~~yvP~d~~~P~~r-------~~~~l~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~----~~~ 355 (642)
T COG1020 292 VALLAVLKAGAAYVPLDPLYPAER-------LAYILEDSRPTLLLTQAHLRVDDV-----GLPGLALDDALSE----IPD 355 (642)
T ss_pred HHHHHHHhcCCeEecCCCCChHHH-------HHHHHhhcCccEEEeccccccccc-----cCCcccccccccc----CCc
Confidence 999999999999999999999999 889999999999998733221110 0110111111000 000
Q ss_pred cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccce
Q 037878 625 NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGST 704 (2280)
Q Consensus 625 ~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~ 704 (2280)
.........+++.+|++|||||||+||||+++|+++.+.+.+....+..+.+|+++...+++||.+. .+++.++..|++
T Consensus 356 ~~~~~~~~~~~~~ayiiytsgstg~Pkgv~~~h~~~~~~~~~~~~~~~~~~~d~~l~~~s~~fD~~~-~~~f~~l~~G~~ 434 (642)
T COG1020 356 TDPIPQALLGDALAYIIYTSGSTGQPKGVRIEHRALANLLNDAGARFGLDADDRVLALASLSFDASV-FEIFGALLEGAR 434 (642)
T ss_pred cCcccccCCCCCeEEEEEccCCCCCCCCceecCHHHHHHHHHHHHhcCCCcccEEeecCCcccchhH-HHHHHHHhCCCE
Confidence 0001123456899999999999999999999999999999888888999999999999999999986 689999999999
Q ss_pred EEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhc
Q 037878 705 AILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTR 784 (2280)
Q Consensus 705 ~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~ 784 (2280)
+++.++.. ..++..+.+.+.++++|++..+|..+..+........ .....+.+|.+++|||+++.++..++.....
T Consensus 435 l~~~~~~~-~~~~~~l~~~~~~~~vt~~~~~p~~~~~~~~~~~~~~---~~~~~~~lr~~~~gGe~l~~~~~~~~~~~~~ 510 (642)
T COG1020 435 LVLAPALL-QVDPAALLELLEAQGITVLLLVPLLLRLLLLAALAPD---LISPCERLRQLLSGGEALPLALVQRLLQLAA 510 (642)
T ss_pred EEecCccc-cCCHHHHHHHHHHcCCEEEEecHHHHHHHHhchhhcc---ccCCcccccEEEEcCCCCCHHHHHHHHHhcc
Confidence 99987654 5699999999999999999999998888775411111 1122345999999999999999999987642
Q ss_pred CCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCC
Q 037878 785 PFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPS 864 (2280)
Q Consensus 785 ~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~ 864 (2280)
+...+.|.||+||+++.++........ .. .-.+|+|++|++++|+|.. .+.+|.|..|||+|.|.+
T Consensus 511 ----~~~~l~~~ygpTe~~~~~~~~~~~~~~-------~~-~~piG~p~~n~~~~ild~~--~~~~p~gv~gel~i~g~~ 576 (642)
T COG1020 511 ----LARRLLNLYGPTEATLDAPSFPISAEL-------ES-RVPIGRPVANTQLYILDQG--LRPLPLGVPGELYIAGLG 576 (642)
T ss_pred ----ccceEeeccCccHHhhheeeEEccccc-------CC-CCCcceeeCCCeEEEECCC--CCcCCCCCCeeeEECCcc
Confidence 146799999999987766544322111 00 2468999999999999943 356689999999999999
Q ss_pred cccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhcc
Q 037878 865 AGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESST 936 (2280)
Q Consensus 865 v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p 936 (2280)
+++||+++|++|+++|..+ ++|||||++|+. ||.++++||.|+|||++|+|||++|||..+.++|
T Consensus 577 ~a~gy~~~p~lt~~~f~~~-------~~y~tgD~~r~~~dg~~e~lgr~D~qvki~g~Riel~eie~~l~~~~ 642 (642)
T COG1020 577 LALGYLNRPDLTAERFIAL-------RLYRTGDLARPLADGALEYLGRKDSQVKIRGFRIELGEIEAALAEQP 642 (642)
T ss_pred hhhhhcCChhhhHHHhhhc-------cCccCCCeeeECCCCeEEEeccccceeEeceEecCcHHHHHHHhcCC
Confidence 9999999999999999863 499999999985 9999999999999999999999999999998764
No 135
>KOG1179 consensus Very long-chain acyl-CoA synthetase/fatty acid transporter [Lipid transport and metabolism]
Probab=100.00 E-value=7.7e-40 Score=389.95 Aligned_cols=497 Identities=19% Similarity=0.198 Sum_probs=369.8
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+.+...++++ |+++|+++.++. +.+||+|++++++++|+.|... |++.||.|++.|+|++|++..+
T Consensus 76 ~~ti~~~F~~~vrr~--p~k~aii~~~~~----~~~Tf~e~~~~s~~~A~~~~~~---~l~~GD~VAL~men~pefv~lW 146 (649)
T KOG1179|consen 76 RRTIAELFLSQVRRQ--PDKPAIIYEGPF----QSLTFAELDARSNRVANYLHAE---GLKAGDVVALLMENRPEFVALW 146 (649)
T ss_pred CCcHHHHHHHHHHhC--CCccEEEEeCCC----ceeeHHHHHHHHHHHHHHHHHh---hcccCCEEEEecCCChhHHHHH
Confidence 456788888887774 899999988753 5789999999999999999998 8999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCC-----Cccccc---------c
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNL-----PWLHTD---------S 613 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~-----~~~~~~---------~ 613 (2280)
|+..|+|++...|+...-.+. +.+.+..++++.++++.+....+.+. .+.. ...... +
T Consensus 147 lGLaKlGv~tA~iNtNlR~~~-------LlHsi~~s~aralv~~~el~~~~~e~-~~~l~~~~i~~~~~~~~~~~~g~~~ 218 (649)
T KOG1179|consen 147 LGLAKLGVITAFINTNLRGEP-------LLHSITVSGARALVVGPELLNALEEI-LPLLIKNGIHVFSLGPTSVPDGIES 218 (649)
T ss_pred HhHHhhCceeeeeccccccch-------hhhhhhhcCceEEEECHHHHHHHHhc-chhhhhccceEEecCCCCCCchHHH
Confidence 999999999999998776665 88999999999999998876554432 1111 111110 1
Q ss_pred ccccccccccccc---cccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhh
Q 037878 614 WVKNSKNLLAENV---VCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMG 690 (2280)
Q Consensus 614 ~~~~~~~~~~~~~---~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 690 (2280)
+..... .....+ ......+..+++..||||||||.||+.++||.-+..........++++++|+++..+|++|.++
T Consensus 219 L~~~l~-~~~~~~vp~~~~~~~~~~s~~lyIYTSGTTGLPKaAvith~r~~~~a~g~~~~~g~~~~DvvY~~lPLYHsaa 297 (649)
T KOG1179|consen 219 LLAKLS-AAPKHPVPVSTRSGLTFRSPLLYIYTSGTTGLPKAAVITHLRYLQGAAGFYYVFGMTADDVVYTTLPLYHSAA 297 (649)
T ss_pred HHHhhc-ccccCCCCcccCCCccccceeEEEEcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCccceEEEcchhHHHHH
Confidence 111000 011111 1223345678999999999999999999999999888887888899999999999999999999
Q ss_pred HHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCC
Q 037878 691 LIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEP 770 (2280)
Q Consensus 691 l~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~ 770 (2280)
.+..+..++..|+|+|+-. .| +...+|+...++++|+..-.--+.+-+++...... +.-..+|..+ |..
T Consensus 298 ~ilGi~~~l~~GaT~Vlrk--KF--SAS~FW~DC~k~~~Tv~QYIGElcRYLl~~p~~~~-----er~HkVRla~--GNG 366 (649)
T KOG1179|consen 298 GILGIGGCLLHGATVVLRK--KF--SASNFWDDCRKYNVTVIQYIGELCRYLLNQPPSPE-----ERQHKVRLAY--GNG 366 (649)
T ss_pred HHHHHHHHHhcCceEEEec--cc--chhhhHHHHHHhCCeeeehHHHHHHHHHcCCCChh-----hcCceEEEEe--cCC
Confidence 9999999999999999965 23 88899999999999998877666666665433322 2223566554 777
Q ss_pred CCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccC---------CC------CC
Q 037878 771 VRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQ---------ND------PD 835 (2280)
Q Consensus 771 l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~---------p~------pg 835 (2280)
+.++..++|.++|+ ..++.+.||+||...-....... +|.+|. |. +.
T Consensus 367 LR~diW~~Fv~RFg-----~~~IgE~YgaTEgn~~~~N~d~~-------------vGA~G~~~~~~~~l~p~~LIk~D~~ 428 (649)
T KOG1179|consen 367 LRPDIWQQFVKRFG-----IIKIGEFYGATEGNSNLVNYDGR-------------VGACGFMSRLLKLLYPFRLIKVDPE 428 (649)
T ss_pred CCchHHHHHHHHcC-----CCeEEEEeccccCcceeeeecCc-------------cccccchhhhhhhccceEEEEecCC
Confidence 99999999999874 45699999999987543322110 111111 00 11
Q ss_pred ceEEEEcCCCCcccCCCCCeeEEEEc----CC-CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEE
Q 037878 836 VDIRIVNPETSEEIGEPGKEGEVWIS----SP-SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFIT 909 (2280)
Q Consensus 836 ~~v~Ivd~~~~~~~~p~G~~GEL~i~----Gp-~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~ 909 (2280)
+.=-|.|++|....+++||.|.|+-+ -| .-+.||.+.++.|+++...|-+. .|+-||.|||+-.+| .|++||.
T Consensus 429 t~E~iRd~~G~Ci~~~~GEpGlLv~~i~~k~P~~~F~GY~g~~~~t~kKl~rDVFk-kGD~~f~tGDlLv~D~~GylYF~ 507 (649)
T KOG1179|consen 429 TGEPIRDSQGLCIPCPPGEPGLLVGKIVQKNPLRSFLGYAGPKKATEKKLLRDVFK-KGDVYFNTGDLLVADELGYLYFK 507 (649)
T ss_pred CCceeecCCceEEECCCCCCceEEEEeccCCchhhhccccCchhhhhhhhHHhhhc-cCcEEEeeCcEEEEecCCcEEEe
Confidence 11124566666666789999976542 22 23889999889998887766443 578999999999998 8999999
Q ss_pred ecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHH
Q 037878 910 GRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIEN 989 (2280)
Q Consensus 910 GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~ 989 (2280)
+|..|.+.-.|+||+..|||.+|..+..+.+ +.|.|+.. ++.++..+...+. ..+....+ .+.
T Consensus 508 DRtGDTFRWKGENVsTtEVe~~l~~~~~~~d---v~VYGV~V----------P~~EGRaGMAaI~-~~p~~~~d---~~~ 570 (649)
T KOG1179|consen 508 DRTGDTFRWKGENVSTTEVEDVLSALDFLQD---VNVYGVTV----------PGYEGRAGMAAIV-LDPTTEKD---LEK 570 (649)
T ss_pred ccCCCceeecCCcccHHHHHHHHhhhccccc---eeEEEEec----------CCccCccceEEEE-ecCcccch---HHH
Confidence 9999999999999999999999999888765 78887543 3334444444433 23333322 455
Q ss_pred HHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 990 IKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 990 l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
+-.++.+.++.+..|..+-..++|++|.+=|..|.+|.+.
T Consensus 571 l~~~l~~~LP~YA~P~FlRl~~~i~~TgTFKl~K~~L~~e 610 (649)
T KOG1179|consen 571 LYQHLRENLPSYARPRFLRLQDEIEKTGTFKLQKTELQKE 610 (649)
T ss_pred HHHHHHhhCccccchHHHHHHhhhhcccchhhHHHHHHHc
Confidence 5566666666666665554569999999999999988765
No 136
>PRK07824 O-succinylbenzoic acid--CoA ligase; Provisional
Probab=100.00 E-value=2.5e-37 Score=393.71 Aligned_cols=324 Identities=21% Similarity=0.304 Sum_probs=247.5
Q ss_pred CCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCc
Q 037878 631 ESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSP 710 (2280)
Q Consensus 631 ~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~ 710 (2280)
...++|+++|+|||||||.||||+++|+++.+.+......+ ...++.+..+|++|.+++. .++.++..|++++++..
T Consensus 31 ~~~~~d~a~il~TSGTTG~PKgv~~s~~~l~~~~~~~~~~~--~~~~~~~~~~p~~~~~g~~-~~~~~l~~g~~~v~~~~ 107 (358)
T PRK07824 31 EPIDDDVALVVATSGTTGTPKGAMLTAAALTASADATHDRL--GGPGQWLLALPAHHIAGLQ-VLVRSVIAGSEPVELDV 107 (358)
T ss_pred CCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHhcc--CCCCeEEEECChHHHHHHH-HHHHHHHcCCeEEecCc
Confidence 45678999999999999999999999999988887665544 3557888999999999974 57788888988877432
Q ss_pred cccccCHHHHHHHHhhcc--eeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 711 LTFIKNPLLWLETMSKYR--ATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 711 ~~~~~~p~~l~~~i~~~~--vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
.. ..++..+++.+++++ .++...+|..+..++.... ...+++++|.+++||+++++++.+++.+.
T Consensus 108 ~~-~~~~~~~~~~i~~~~~~~~~~~~~p~~l~~~~~~~~------~~~~~~~l~~i~~gG~~l~~~~~~~~~~~------ 174 (358)
T PRK07824 108 SA-GFDPTALPRAVAELGGGRRYTSLVPMQLAKALDDPA------ATAALAELDAVLVGGGPAPAPVLDAAAAA------ 174 (358)
T ss_pred CC-CcCHHHHHHHHHHhCCCceEEEecHHHHHHHHhCcc------ccCCcccceEEEECCCCCCHHHHHHHHhc------
Confidence 21 238899999999998 4555566766655443211 12457899999999999999999888752
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++.+++.||+||++..+. ..|.|+++++++|.| |||+++|+.++.|
T Consensus 175 -~~~v~~~YG~TE~~~~~~--------------------~~G~~~~g~~v~i~~-------------Gei~v~g~~~~~g 220 (358)
T PRK07824 175 -GINVVRTYGMSETSGGCV--------------------YDGVPLDGVRVRVED-------------GRIALGGPTLAKG 220 (358)
T ss_pred -CCcEEecccCCccCCCcC--------------------cCceeCCCCEEEecC-------------CEEEEecCccccc
Confidence 567999999999864321 246788999998832 8999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEe
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIG 948 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~ 948 (2280)
|+|+++.+ .|. .++||+|||+++++||.++|+||+||+||++|+||+|.|||++|.+||+|.+ |+|++
T Consensus 221 Y~~~~~~~--~~~-------~~g~~~TGDl~~~~~g~l~i~GR~~d~i~~~G~~v~p~eIE~~l~~~~~V~~---~~vv~ 288 (358)
T PRK07824 221 YRNPVDPD--PFA-------EPGWFRTDDLGALDDGVLTVLGRADDAISTGGLTVLPQVVEAALATHPAVAD---CAVFG 288 (358)
T ss_pred cCCCcccc--ccc-------CCCceecccEEEEeCCEEEEEeccCCeEEECCEEECHHHHHHHHHhCCCcce---EEEEe
Confidence 99988743 232 2469999999999999999999999999999999999999999999999975 88998
Q ss_pred ccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 949 VPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
.+++..+ ....+++ ....+. ...+++++.++++++. +++| ..++.+++||+|.+||+||++|+
T Consensus 289 ~~~~~~g----------~~~~a~v--~~~~~~~~~~~~i~~~~~~~l~~-~~~P---~~i~~v~~lP~t~~GKi~r~~L~ 352 (358)
T PRK07824 289 LPDDRLG----------QRVVAAV--VGDGGPAPTLEALRAHVARTLDR-TAAP---RELHVVDELPRRGIGKVDRRALV 352 (358)
T ss_pred cCCCCCc----------eEEEEEE--EeCCCCCcCHHHHHHHHHhhCcc-ccCC---CEEEEecCCCCCCCccccHHHHH
Confidence 8775432 1222222 222222 2234566666666654 4444 44555699999999999999999
Q ss_pred HHhhc
Q 037878 1028 KQFVD 1032 (2280)
Q Consensus 1028 ~~~~~ 1032 (2280)
++|.+
T Consensus 353 ~~~~~ 357 (358)
T PRK07824 353 RRFAG 357 (358)
T ss_pred HHhhc
Confidence 98754
No 137
>PTZ00297 pantothenate kinase; Provisional
Probab=100.00 E-value=2e-35 Score=412.06 Aligned_cols=404 Identities=14% Similarity=0.120 Sum_probs=292.2
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
++...++.+++++.+++. |+++|+.+....+ +++.+||+|+.++++++|+.|++. |+++||+|+|+++|++||+
T Consensus 423 ~~~~~Tl~dll~~~a~~~--pd~~al~~~~~~g-~~~~lTY~El~~~V~~lAa~L~~l---GV~~GDrVaIls~N~~Ewv 496 (1452)
T PTZ00297 423 LAGVRSLGEMWERSVTRH--STFRCLGQTSESG-ESEWLTYGTVDARARELGSGLLAL---GVRPGDVIGVDCEASRNIV 496 (1452)
T ss_pred cccCCCHHHHHHHHHHHC--CCCeEEEEeccCC-CceEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHH
Confidence 345668999999888774 7888886431112 236799999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCc-cccccc---c-----
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPW-LHTDSW---V----- 615 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~-~~~~~~---~----- 615 (2280)
++.+||+++|++.||+.+. .+. +.++++++++++++++.+....+.....+.+.. +..+.. .
T Consensus 497 ia~lA~~~~GaV~VPly~t--~~e-------L~yIL~~S~akvVfv~~~~l~kl~~i~~~~Lr~IIv~d~~~~~~~~~~~ 567 (1452)
T PTZ00297 497 ILEVACALYGFTTLPLVGK--GST-------MRTLIDEHKIKVVFADRNSVAAILTCRSRKLETVVYTHSFYDEDDHAVA 567 (1452)
T ss_pred HHHHHHHHcCCEEEeCCCC--HHH-------HHHHHHhcCCcEEEEchhHHHHHHhhcccCCcEEEEECCCccccccccc
Confidence 9999999999999999643 222 889999999999999866544332211111111 111100 0
Q ss_pred ----------ccccccccc-cccccCCCCCCCeEEEEe---ccCCCCCceEEEEchHHHHHHHHHHHHHc---CCCCCcE
Q 037878 616 ----------KNSKNLLAE-NVVCFTESQPDDLCFLQF---TSGSTGDAKGVMITHGGLIHNVKLMRKRY---KSTSKTV 678 (2280)
Q Consensus 616 ----------~~~~~~~~~-~~~~~~~~~~~d~a~Iiy---TSGSTG~PKgV~~tH~~l~~~~~~~~~~~---~~~~~d~ 678 (2280)
......... .........++|++.|+| ||||||.||||++||+|++..+....... ...++|+
T Consensus 568 ~~~~i~~~s~~~ll~~G~~~~~~~~~~~~~dDlatIiYtSyTSGTTG~PKGVmLTH~Nlla~~~~~~~~~~~~~~~~~D~ 647 (1452)
T PTZ00297 568 RDLNITLIPYEFVEQKGRLCPVPLKEHVTTDTVFTYVVDNTTSASGDGLAVVRVTHADVLRDISTLVMTGVLPSSFKKHL 647 (1452)
T ss_pred ccCCcceeeHHHHHhcCcccCccccCCCCcccEEEEEecCCCCCCCcCCcEEEEeHHHHHHHHHHHhhhccccCCCCCCE
Confidence 000000000 011122346889999996 99999999999999999999988765432 3467899
Q ss_pred EEEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccc-----
Q 037878 679 LVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKV----- 753 (2280)
Q Consensus 679 ~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~----- 753 (2280)
+++++|++|.++.+ ..+.++..|+++.. .++..+++.++++++|++.++|.+++.+.+.........
T Consensus 648 ~Ls~LPLaHI~er~-~~~~~l~~G~~I~~-------~d~~~lledL~~~rPTv~~~VPrv~ekI~~~i~~~~~~~~~~~~ 719 (1452)
T PTZ00297 648 MVHFTPFAMLFNRV-FVLGLFAHGSAVAT-------VDAAHLQRAFVKFQPTILVAAPSLFSTSRLQLSRANERYSAVYS 719 (1452)
T ss_pred EEEechHHHHHHHH-HHHHHHHcCCEEEe-------CCHHHHHHHHHHHCCEEEEecHHHHHHHHHHHHHHhhhhhHHHH
Confidence 99999999999964 45667888888752 267889999999999999999999988765442211100
Q ss_pred -----------------cc----cC----------C-CCccEEEEecC--CCCHHHHHHHHHHhcCCCCCCcccccccCc
Q 037878 754 -----------------RS----FD----------L-SSMKFLMVAAE--PVRQTTVKRFVELTRPFGLSQGVMAPGYGL 799 (2280)
Q Consensus 754 -----------------~~----~~----------l-~~Lr~l~~gGe--~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~ 799 (2280)
.. .+ + .++|.+++||. +++..+.. .+.+..+||+
T Consensus 720 ~lf~~A~~~k~~~~~~g~~~~~l~d~LVf~kir~~lGGrlr~~isGga~~~l~~~l~~------------~i~i~~g~gl 787 (1452)
T PTZ00297 720 WLFERAFQLRSRLINIHRRDSSLLRFIFFRATQELLGGCVEKIVLCVSEESTSFSLLE------------HISVCYVPCL 787 (1452)
T ss_pred HHHHHHHHHHHHHHhcCCCCcHHHHHHHHHHHHHHhcCCeEEEEECCCccccChHHhC------------CceEEEecce
Confidence 00 00 0 57999999973 55544322 3557889999
Q ss_pred cccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcC-CCCcccCCCCCeeEEEEcCCCcccccCCCchhhHH
Q 037878 800 AENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNP-ETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQI 878 (2280)
Q Consensus 800 TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~-~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~ 878 (2280)
||+. ++.... .... .|+|+|+++++|.|. +.+. .+..|||+++ |++||+.|++
T Consensus 788 TE~~---~~~~~~----------~~~~--~G~PlpgvEvKI~~~~E~~~----~~~~GEIlvr-------~~kdpe~T~e 841 (1452)
T PTZ00297 788 REVF---FLPSEG----------VFCV--DGTPAPSLQVDLEPFDEPSD----GAGIGQLVLA-------KKGEPRRTLP 841 (1452)
T ss_pred EEee---eecCCC----------Cccc--CCeecCceEEEEcccccccC----CCCCCeEEEE-------ECCChHHHHH
Confidence 9943 222111 1112 389999999999973 3222 1246999995 4589999997
Q ss_pred HHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEE-CCeeechHHHHHHHHhccCCcCCceeEEEec
Q 037878 879 TFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIV-AGRNVYSADVEKTVESSTEHIRPGCCAVIGV 949 (2280)
Q Consensus 879 ~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~ 949 (2280)
.+ ++|+ +||.|.|+||+||+||. +|++|.|+.||+.+.++|-|.+ ++|+|-
T Consensus 842 ~~---------~gW~--------~dG~L~IidRkKdlikls~GEyVaP~~IE~~l~~sp~I~q---i~V~Gd 893 (1452)
T PTZ00297 842 IA---------AQWK--------RDRTLRLLGPPLGILLPVAYEYVIAAELERIFSQSRYVND---IFLYAD 893 (1452)
T ss_pred hh---------CcCc--------cCCeEEEEeccccceECCCCcEEcHHHHHHHHhcCCCccE---EEEEec
Confidence 43 2564 58999999999999999 8999999999999999998864 778773
No 138
>KOG1178 consensus Non-ribosomal peptide synthetase/alpha-aminoadipate reductase and related enzymes [Secondary metabolites biosynthesis, transport and catabolism]
Probab=100.00 E-value=5.7e-35 Score=384.83 Aligned_cols=609 Identities=19% Similarity=0.169 Sum_probs=377.9
Q ss_pred HHHHHHhhccccc-cCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 471 LDGYLKHWGTHRI-TQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 471 l~~~l~~~a~~~~-~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
+++-++..+...+ ......+....+.+. ..+.||++....++.+++.|... |..+|+.|++++..+.++++.+++
T Consensus 38 ~~~~~~~~~~~~~~~~~~~~~p~~~~~~~-i~~~t~r~~~~~~n~~~q~l~~~---~~~~~~~v~i~~~~~~d~~v~v~~ 113 (1032)
T KOG1178|consen 38 LEDSFRRELAEAPENTGHVIIPTASESGI-IDSFTYRLIRLLSNIIAQFLVSL---GSLRGTTVAIYMLPSVDLVVSVFA 113 (1032)
T ss_pred hhhHHHHHHhhcccCCCceEeeccccccc-ccchhhhhhhcccchhHHHhhhc---ccccCceEEEeccCcCCeeeeeee
Confidence 3444444444321 122333333333332 36899999999999999999887 899999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccccccccc
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVCF 629 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 629 (2280)
++++|..++|+||++|..+....+.++.+.+......++.-. ...........+.......++...... ........
T Consensus 114 ~~~~g~~~~~idp~~~~~e~~~~~~~ia~~~~s~~~~i~~~l-~i~~~~~~~~~~~~sv~~~~~~f~~~~--~~~~~r~~ 190 (1032)
T KOG1178|consen 114 VLAAGLTFLPIDPSWPNSELAGYLMRIAHFLTSVELEIVRRL-NIIDILLNSLFPKLSVETIADSFQMVL--HNEDTREI 190 (1032)
T ss_pred hhhcceEEEEecCCCcccccchHHHhhhhhheeccceehhhh-hhHHHHhhccccccchhhccchhhhhh--ccCCCcce
Confidence 999999999999999932222222233333332222211110 000000000111111111111111000 01111122
Q ss_pred CCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeC
Q 037878 630 TESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFS 709 (2280)
Q Consensus 630 ~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~ 709 (2280)
....+|..+++.||||+||.||||.-+|..+++..++....+..+.++++-.....+++...-..+.+.|..|+.+..+.
T Consensus 191 ~~~~~ds~~~l~~tSgs~G~pk~v~~~~~sl~~~fdw~~~~f~~t~s~~~~~~~~~~~~d~i~~~~~~~L~~~~~l~~p~ 270 (1032)
T KOG1178|consen 191 RVGGNDSTALLSFTSGSTGVPKGVAGTHFSLANAFDWMFTTFPPTGSDRFTFKTSVYFDDTIQKFIGALLFNGNNLLVPT 270 (1032)
T ss_pred eeecccccceEeecccccccccccchhHHHHHhhhhhccccCCcCccchhhhhheeecccchHHHHhhHhhcCceeeccc
Confidence 33456789999999999999999999999999999999999998888876444455455544344455556665555443
Q ss_pred ccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcc----ccc-c---cccCCCCccEEEEecCCCCHHHHHHHHH
Q 037878 710 PLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESS----KDK-V---RSFDLSSMKFLMVAAEPVRQTTVKRFVE 781 (2280)
Q Consensus 710 ~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~----~~~-~---~~~~l~~Lr~l~~gGe~l~~~l~~~~~~ 781 (2280)
+ .....|..|.+.+++++++....+|++.+.++...... ... . .....+.|+...++||+...++...+.+
T Consensus 271 ~-~~~~~~~~l~~~le~y~i~~~~~~~a~~~~l~~~~~~~~~~l~~~~~~~dl~~~~~~Lkl~~~~~ep~~v~l~~s~~~ 349 (1032)
T KOG1178|consen 271 A-TIKDTPGQLASTLERYGITVSHLLPAMCQLLLAILTTSLPLLEHAFSLSDLLTKRSCLKLVVLGGEPLLVSLYTSTFD 349 (1032)
T ss_pred c-cCccchhhHHHHHHhhhheeeeechhhhhhhhhhcCcchhhhhhhhhcccccccchhheeeeecCCccchhhhhhhhh
Confidence 3 22334889999999999999999999977776543331 000 0 0122357999999999999988876655
Q ss_pred HhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCC----CceEEEEcCCCCcccCCCCCeeE
Q 037878 782 LTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDP----DVDIRIVNPETSEEIGEPGKEGE 857 (2280)
Q Consensus 782 ~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~p----g~~v~Ivd~~~~~~~~p~G~~GE 857 (2280)
.+. ..-...-|++||.+...+............ ...+..+++-.. ...+.+... .|..||
T Consensus 350 ~~~-----~~~~~~~y~s~~~~~~~s~~~~~~s~~ll~---~~~v~~~p~~~~~~~~~~~~~~~~~--------~~~~~~ 413 (1032)
T KOG1178|consen 350 LLA-----EIFFGLPYLSTDPTGLVSYDDFSPSKVLLT---NENVYSVPKFDSIIGSLTVLESLYR--------AGGEGE 413 (1032)
T ss_pred ccc-----ceeeeecccCCCCccceeHHhhCcccceec---ceeEEeccchhhccCCCcceeeeec--------cCcccC
Confidence 442 222334499999887766543222111111 011111111111 122222221 122233
Q ss_pred EEEcCCCcccccC-----CCchhhHHHHhhhcc--CCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHH
Q 037878 858 VWISSPSAGIGYW-----GREELSQITFRNELQ--NNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVE 929 (2280)
Q Consensus 858 L~i~Gp~v~~GY~-----~~p~~t~~~f~~~~~--~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE 929 (2280)
.++.+.+++.++- .+...+.+.|.+... ....+++|||||+||.- +|.+.|.||.|+|||+||+||+++||+
T Consensus 414 ~~v~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~~~d~~~~r~y~tgD~gr~l~ng~l~~~GR~d~qIK~rG~Ri~L~ei~ 493 (1032)
T KOG1178|consen 414 GGVGKGCLGAEQNLSSWVVDGYSTPENFLPNFLTVDGVKARIYRTGDNGRSLKNGGLEISGRADRQIKDRGVRIELGELN 493 (1032)
T ss_pred CcccceeecccccccceeeccccchhhcCCcccccccchhhcccccccceeecCCCEEEEEeccceEEEccEEEehhhhc
Confidence 3332222222111 111234444433222 23347999999999985 999999999999999999999999999
Q ss_pred HHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEec
Q 037878 930 KTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIK 1009 (2280)
Q Consensus 930 ~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~ 1009 (2280)
+++..||.|.+ +.+..+.+...+ ...+++++ ...+... .++..|+.++..++..++.|..++.
T Consensus 494 t~v~~~p~v~~---~itl~~~~~~~~---------~~l~aFvv---~~~~~~~--~~~~~i~~~l~~~La~y~vPs~~V~ 556 (1032)
T KOG1178|consen 494 TVVEVHPDVKE---AITLARENSTVG---------QTLLAFVV---ERGGSKS--VLIRDIRNYLKKELASYMLPSLVVP 556 (1032)
T ss_pred hhhccCcchhh---hheeeeeccccC---------ceEEEEEe---ccCCCCc--hhHHHHHHhhcccccceecceEEEE
Confidence 99999998875 444544433211 12233332 2222222 3366677777776666777777888
Q ss_pred CCCccCCCCcccchHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHH
Q 037878 1010 PRTMSKTTSGKIKRFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGL 1089 (2280)
Q Consensus 1010 ~~~lP~t~sGKvdR~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~i 1089 (2280)
++++|+|++||||+++|.+ +.......-. .... .......+..+..++..
T Consensus 557 l~~vPl~~~GKvDkkaL~~-~~s~~~~~~~---------------s~~~--------------~~~~~~~~~~~~~v~d~ 606 (1032)
T KOG1178|consen 557 LAKVPLNPNGKVDKKALLE-YNSKLTNVQD---------------SSLS--------------EAKDSILSLPLSTVFDL 606 (1032)
T ss_pred hhhCCcCCCCCcChhhhhh-hhhhhccccc---------------ceee--------------ccccccccccccchhhh
Confidence 8999999999999999877 3221111000 0000 00011223345567788
Q ss_pred HHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1090 VSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1090 w~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
|-++.+. ..++.|+|||++|||||.|+++...+++...+..++.-++..+|+..+...+..
T Consensus 607 ~l~~~~~--~~~s~d~~fF~lGgdSi~av~~~~~lr~~~~v~~~~~l~~~l~ti~~~~~~~~~ 667 (1032)
T KOG1178|consen 607 WLSIGSL--AIVSPDSSFFQLGGDSISAVRLSGLLRKKGYVEGPLGLIFKLLTIVNLESGIIR 667 (1032)
T ss_pred hhhhcCc--cccCCCcchhhhcchhHHHHHHHHhhhhhheeccccccccchhhHHHHHHHHhh
Confidence 8888872 356789999999999999999999999998999999999999999999987654
No 139
>TIGR02372 4_coum_CoA_lig 4-coumarate--CoA ligase, photoactive yellow protein activation family. Ectothiorhodospira halophila. This enzyme is designated 6.2.1.12 and therefore joins a number of plant enzymes linked to lignin biosynthesis and given similar names.
Probab=99.97 E-value=8.8e-30 Score=321.41 Aligned_cols=289 Identities=17% Similarity=0.155 Sum_probs=209.3
Q ss_pred CCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCC--CcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCccc
Q 037878 635 DDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTS--KTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLT 712 (2280)
Q Consensus 635 ~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~--~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~ 712 (2280)
++.++++|||||||.||||++||+++.+.+......++... .+++++++|++|.+++...++.++..|+++++...
T Consensus 95 ~~~~~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~dr~l~~~Pl~h~~g~~~~~l~~l~~G~~vv~~~~-- 172 (386)
T TIGR02372 95 PTARFTFATSGSTGTPKPVTHSWAALLSEAQAIAKILGERPPPVRRVISCVPAHHLYGFLFSCLLPSRRGLEAKQLAA-- 172 (386)
T ss_pred CCceEEEECCCCCCCCceeEeeHHHHHHHHHHHHHHhCcCCCCCCeEEEeCCcHHHHHHHHHHHHHHHCCCeEEecCC--
Confidence 56899999999999999999999999998888777777643 46899999999999987888889999999988653
Q ss_pred cccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCcc
Q 037878 713 FIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGV 792 (2280)
Q Consensus 713 ~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~ 792 (2280)
+ ++..+++.++.+ |++.++|++++.+.+. ..+++++|. ++||+++++++.+++.+. . ...
T Consensus 173 ~--~~~~~l~~i~~~--t~~~~~P~~l~~l~~~---------~~~l~slr~-i~gGa~l~~~l~~~~~~~-g-----~~~ 232 (386)
T TIGR02372 173 A--PASGIMRHARPG--DLIVGTPFIWEQLADL---------DYRLPGVVG-VSSGAPSTAATWRCLLAA-G-----LAR 232 (386)
T ss_pred C--ChHHHHHhhccC--CEEEECcHHHHHHHhh---------CcCCCccee-EecCCCCCHHHHHHHHHh-c-----ccc
Confidence 2 677788877653 7888899999888643 134677886 678999999999998874 1 235
Q ss_pred cccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCC
Q 037878 793 MAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGR 872 (2280)
Q Consensus 793 v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~ 872 (2280)
+++.||+||++.+++... . +..|.|+|++++.+ | ++ . + .|+
T Consensus 233 v~~~YG~TEt~~i~~~~~-~--------------~~~~~~~p~~~~~~-~-~~--------~--~---~g~--------- 273 (386)
T TIGR02372 233 LLEVYGATETGGIGLREA-P--------------DDPFRLLPDLACFA-D-TL--------S--S---AGL--------- 273 (386)
T ss_pred hhheeccccccccccccC-C--------------CCCcccCCCccccC-C-Cc--------c--C---CCc---------
Confidence 899999999986543211 0 12345667665432 1 10 0 0 011
Q ss_pred chhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccc
Q 037878 873 EELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPE 951 (2280)
Q Consensus 873 p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~ 951 (2280)
..|++|||+++++ +|.++|+||+||+||++|+||+|.|||++|.+||+|.+ |+|...
T Consensus 274 -----------------~~~~~tgD~g~~d~~G~l~i~GR~dd~Ik~~G~~V~p~eIE~~l~~~p~V~~---~~v~~~-- 331 (386)
T TIGR02372 274 -----------------ARRLDLQDRLAWDKDGGFTILGRKDEILQVGGVNVSPGHVRDILERNPRVRA---AAVRLD-- 331 (386)
T ss_pred -----------------cceeecCceEEEcCCCcEEEecccCCEEEECCEEEcHHHHHHHHHcCCCceE---EEEEcC--
Confidence 1368999999997 99999999999999999999999999999999999865 555421
Q ss_pred cccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccc
Q 037878 952 EVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIK 1022 (2280)
Q Consensus 952 ~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvd 1022 (2280)
+....++++. .++... ..+.+.+++.+.++++.+..|..+...++||+|++||++
T Consensus 332 ------------g~~~~a~vv~---~~~~~~-~~~~~~l~~~~~~~L~~~~~P~~i~~~~~lP~t~~GKi~ 386 (386)
T TIGR02372 332 ------------GRRLKAFIVV---AEDADE-AELEIELRATAARHLPAPARPDRFRFGTELPRTGAGKLA 386 (386)
T ss_pred ------------CceEEEEEEE---CCCCCh-HHHHHHHHHHHHHhCCCCCCCcEEEEcccCCCCCCCCcC
Confidence 1122233332 222211 222344455455444444455556667999999999985
No 140
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.97 E-value=1.7e-27 Score=299.84 Aligned_cols=538 Identities=25% Similarity=0.388 Sum_probs=399.9
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
-++-++|+..++. +||.+|+...+.+|.+..++||++|..++.+++..|..++ -+++||.|++++++++|++++++
T Consensus 770 ~~ile~Lq~R~a~--tp~~~a~~~~n~~~~~~~~~Tw~~f~krva~i~~~l~~k~--~lk~Gd~V~Lmy~~sie~vaa~~ 845 (1363)
T KOG3628|consen 770 LTILEILQWRAAK--TPDHIAFTTLNARGATKKTLTWAQFHKRVARIAEYLQDKG--HLKAGDHVVLMYPPSIEFVAAIY 845 (1363)
T ss_pred HHHHHHHHHHhhc--CCCceEEEEeccCCcccceeEHHHHHHHHHHHHHHHHhcc--cCCCCCeEEEEcCChHHHHHHHH
Confidence 4567788888877 4899999999999988899999999999999999999875 58999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC---------CCCCCcccccccccc--
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS---------WPNLPWLHTDSWVKN-- 617 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~---------~~~~~~~~~~~~~~~-- 617 (2280)
||+.+|.+++|+.|..... ....+..+..|++..++..++++......++... ++.. +..+++...
T Consensus 846 ~Cly~GliPIpv~p~~~s~-l~~~l~~~~~ii~~~kv~ailv~~~v~~lLrsr~~s~~~~~s~~p~i--~~~~~~~~t~~ 922 (1363)
T KOG3628|consen 846 ACLYLGLIPIPVPPPHASN-LIEDLPTFRMIIKVYKVAAILVDQKVLKLLRSREASAHVDQSAIPLI--LVLPKLPETIR 922 (1363)
T ss_pred HHHhcCeeeeccCCccHHh-hhhhhHHHHHHHHHhhhheEEecHHHHHHHhhhhHHHHhhhhcchhh--hcccccchhhh
Confidence 9999999999998866543 3445667888999999999999876655443221 1110 111111100
Q ss_pred --cccccc-ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHH
Q 037878 618 --SKNLLA-ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGG 694 (2280)
Q Consensus 618 --~~~~~~-~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~ 694 (2280)
...... ....++....++.+||+=|.--++|.--||.++|.++++.++.......+.+..-++.+.+.+...|++.+
T Consensus 923 k~~~~~~k~~~~~~~g~~~k~~~a~v~~~~~~dg~l~~~~msHsslla~Ck~iKe~~~l~~~rpl~~~~~~~sGlgf~~w 1002 (1363)
T KOG3628|consen 923 KRKKNIKKLNTPTPPGLNNKETPALVWFNVSTDGMLIGVKMSHSSLLAFCKIIKETCQLYKSRPLLGCSSPYSGLGFNHW 1002 (1363)
T ss_pred hhhhhhhccCCCCCccccCCCceEEEEEEecCCcceeeeeccHHHHHHHHHHHHHHHccccCCceEEEecCccchhHHHH
Confidence 000000 01112223456889999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccc--cccCCCCccEEEEecCCCC
Q 037878 695 LFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKV--RSFDLSSMKFLMVAAEPVR 772 (2280)
Q Consensus 695 i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~--~~~~l~~Lr~l~~gGe~l~ 772 (2280)
++...++|...++.+|..+..+|..|++.++++++.-.+..=..+..+.+.+....... ...++++ ..++..-|...
T Consensus 1003 cLlgVysGh~T~Li~p~~l~nnpsLll~~i~~~kvkDt~~~~~tln~c~~~l~t~~enl~~~gnn~s~-s~vv~~~~RPr 1081 (1363)
T KOG3628|consen 1003 CLLGVYSGHPTLLISPMDLENNPSLLLQIISQYKVKDTYPTYSTLNLCQKGLETSVENLSKRGNNTSS-SIVVPAEERPR 1081 (1363)
T ss_pred HHHHHHcCCceeecCHHHhhcCHHHHHHHHhcccccccchhHHHHHHHHhccccccchhhhhhccccc-ceeeecCCccH
Confidence 99999999999999999999999999999999998877766555666655444332211 1123333 34444556667
Q ss_pred HHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCcee--ecC----CCceeec-----------cccCCCCC
Q 037878 773 QTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPII--LDW----QGRVCCG-----------YVDQNDPD 835 (2280)
Q Consensus 773 ~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~--~~~----~g~~~~g-----------~vG~p~pg 835 (2280)
..+++-+.+.+...|+....+--.|+.-=...+|........|.. .|. .|..... --|.-.++
T Consensus 1082 ~ali~sf~klfa~igLsp~avStsys~r~Np~Ic~r~~sg~~Pt~~y~D~raLR~grV~~ve~~ap~~l~L~dSG~~~~~ 1161 (1363)
T KOG3628|consen 1082 IALIASFKKLFAAIGLSPRAVSTSYSSRVNPFICLRSYSGPEPTTVYLDARALREGRVRLVEVGAPHSLLLYDSGKLPVY 1161 (1363)
T ss_pred HHHHHHHHHHHHHcCCChhhhcccccccCChHhhhccccCCCCcceeechhhhhccceeeeecCCCCccccccCCccccc
Confidence 788899999988889888888888887666555444332222211 110 1222111 12555689
Q ss_pred ceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCc-hhhHHHHhhhccC--CCCCceeecCcEEEEE-----C----
Q 037878 836 VDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGRE-ELSQITFRNELQN--NRGRKYTRTGDLGRII-----D---- 903 (2280)
Q Consensus 836 ~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p-~~t~~~f~~~~~~--~~~~~~yrTGDlgr~~-----d---- 903 (2280)
+++.|++||+..++ ..|+.||||+.+..-+.+|++-. |...+.|...... ..+.+|-||||+|++. |
T Consensus 1162 ~~i~IvnPEtk~pc-~dge~GEIW~~S~hnA~~~~~~~d~~~~~~fn~rl~~g~~~~~sy~RTG~LGFl~~t~~t~~~~e 1240 (1363)
T KOG3628|consen 1162 TDIAIVNPETKGPC-RDGELGEIWVNSAHNASCSFTIGDELRSNHFNARLSSGDLLGKSYARTGDLGFLRRTSLTDANVE 1240 (1363)
T ss_pred ceeEEeCCcccccc-ccCCcceEEeccccccccccccCchhhhhhhhhhccccccccccceeeeeeeeeeeeecccccce
Confidence 99999999986554 59999999999999998887541 1333444332221 2367899999999983 3
Q ss_pred --CeEEEEecCCCeEEECCeeechHHHHHHHHh-ccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC
Q 037878 904 --GKFFITGRIKDLIIVAGRNVYSADVEKTVES-STEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK 980 (2280)
Q Consensus 904 --G~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~-~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~ 980 (2280)
.-||++|-.++.+.++|-|..|.+||..+.+ ||.|- .|+|+... ++ +|++++.. ++
T Consensus 1241 ~~~~LyVlG~i~EtlEl~GL~h~p~DIE~TV~~vH~~I~---~cavF~~~---------------gl--vVvviE~~-gq 1299 (1363)
T KOG3628|consen 1241 RHDLLYVLGAIDETLELNGLRHFPSDIETTVERVHPSIG---GCAVFQAT---------------GL--VVVVIECH-GQ 1299 (1363)
T ss_pred eeeeEEEeecccceeeecCcccCcchHHHHHHHhccccc---ceeeEeeC---------------Ce--EEEEEEec-Cc
Confidence 2589999999999999999999999998875 66664 48888632 12 33444443 34
Q ss_pred CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCCCC
Q 037878 981 PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLN 1036 (2280)
Q Consensus 981 ~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~ 1036 (2280)
....++...+.+.+.+++.+-...+.++....+|+++.|.-+|..+++.+.++.++
T Consensus 1300 ~~~~~LvPlIv~~vL~eH~iI~dvV~fV~~G~~p~~~~gEK~R~~I~~~w~~~kL~ 1355 (1363)
T KOG3628|consen 1300 QELADLVPLIVNVVLEEHYIILDVVAFVDKGVFPRNSRGEKQRAHILDSWLAGKLD 1355 (1363)
T ss_pred hhHhhhhHHHHHHHHhhcceEEEEEEEecCCccccCCchhhHHHHHHHHHHhcccc
Confidence 44467888888888888887777788888899999999999999999999887754
No 141
>TIGR02155 PA_CoA_ligase phenylacetate-CoA ligase. Phenylacetate-CoA ligase (PA-CoA ligase) catalyzes the first step in aromatic catabolism of phenylacetic acid (PA) into phenylacetyl-CoA (PA-CoA). Often located in a conserved gene cluster with enzymes involved in phenylacetic acid activation (paaG/H/I/J), phenylacetate-CoA ligase has been found among the proteobacteria as well as in gram positive prokaryotes. In the B-subclass proteobacterium Azoarcus evansii, phenylacetate-CoA ligase has been shown to be induced under aerobic and anaerobic growth conditions. It remains unclear however, whether this induction is due to the same enzyme or to another isoenzyme restricted to specific anaerobic growth conditions.
Probab=99.96 E-value=4.5e-28 Score=314.81 Aligned_cols=329 Identities=19% Similarity=0.218 Sum_probs=229.0
Q ss_pred CCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHH---HHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeC
Q 037878 633 QPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLM---RKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFS 709 (2280)
Q Consensus 633 ~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~---~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~ 709 (2280)
+++++++++|||||||.||+|.++|+++....... ...++..++|++++..++.+..+.+...+..+..|++++..+
T Consensus 73 ~~~~~~~~~~TSGTTG~Pk~v~~t~~~~~~~~~~~~~~~~~~g~~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~ 152 (422)
T TIGR02155 73 PREQVVRIHASSGTTGKPTVVGYTQNDIDTWSSVVARSIRAAGGRPGDLIHNAYGYGLFTGGLGAHYGAEKLGCTVVPIS 152 (422)
T ss_pred ChHHcEEEEECCCCCCCCeEeccCHHHHHHHHHHHHHHHHHcCCCCCcEEEEccCccccchhHHHHHHHHHcCcEEEecC
Confidence 45788999999999999999999999987654433 234578889998877665544443334566777888887665
Q ss_pred ccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCC
Q 037878 710 PLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLS 789 (2280)
Q Consensus 710 ~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~ 789 (2280)
+ .++..+++.|+++++|++.++|+.+..+++....... ..+..++|.+++|||++++++.+.+.+.+
T Consensus 153 ~----~~~~~~~~~i~~~~~t~l~~~Ps~l~~L~~~~~~~~~---~~~~~~lr~i~~~ge~l~~~~~~~i~~~~------ 219 (422)
T TIGR02155 153 G----GQTEKQVQLIQDFKPDIIMVTPSYMLNLLEELKRMGI---DPAQTSLQVGIFGAEPWTNAMRKEIEARL------ 219 (422)
T ss_pred C----CCHHHHHHHHHHHCCCEEEEcHHHHHHHHHHHHHcCC---CcccCceEEEEEeCCcCCHHHHHHHHHHh------
Confidence 3 2578899999999999999999999888876543321 12235899999999999999999988875
Q ss_pred CcccccccCcccccc-ceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 790 QGVMAPGYGLAENCV-FVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 790 ~~~v~n~YG~TE~~~-~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++.++|.||+||++. .+........ . |.. .+.++..++|+|++++.+ +++|+.|||++++.
T Consensus 220 g~~v~~~YG~tE~~~~~~~~~~~~~~------~-----g~~-~~~~~~~~eivd~~~g~~-v~~Ge~Gelvvt~~----- 281 (422)
T TIGR02155 220 GMKATDIYGLSEVIGPGVAMECVETQ------D-----GLH-IWEDHFYPEIIDPHTGEV-LPDGEEGELVFTTL----- 281 (422)
T ss_pred CCceEecccchhhcCCceeecccccC------C-----Cce-EecCeeEEEEECCCCCCC-CCCCCeeEEEEecC-----
Confidence 467999999999852 1111100000 0 110 012356778999766544 47999999999873
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-C-C-----eEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCC
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRII-D-G-----KFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRP 941 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-d-G-----~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~ 941 (2280)
++++|. .+||+|||+++++ + | .+++.||.||+||++|.+|+|.|||++|.++|+|...
T Consensus 282 -------~~~~~p--------~~ry~TGDl~~~~~~~Gr~~~~~~~i~GR~~d~i~~~G~~v~p~eie~~l~~~~~v~~~ 346 (422)
T TIGR02155 282 -------TKEALP--------VIRYRTRDLTRLLPGTARTMRRMDRITGRSDDMLIIRGVNVFPTQLEEVILKMDELSPH 346 (422)
T ss_pred -------Cccccc--------eeeEEcCcEEEEECCCCCcccccccccCccCCeEEECCEEECHHHHHHHHHhCcCcCCC
Confidence 233331 2699999999996 3 4 4689999999999999999999999999999998631
Q ss_pred ceeEEEeccccccccccccccCCCCceEEEEEEEecCCC------CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccC
Q 037878 942 GCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK------PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSK 1015 (2280)
Q Consensus 942 ~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~------~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~ 1015 (2280)
+. +..... +..+...+.+ +..++. .....+.+.+++.+.+.+.... .+.++.+++||+
T Consensus 347 --~q-~~~~~~----------~~~~~~~~~v--~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~-~v~~~~~~~lp~ 410 (422)
T TIGR02155 347 --YQ-LELTRN----------GHMDELTLKV--ELKPESYTLRLHEQASLLAGEIQHTIKQEVGVSM-DVHLVEPGSLPR 410 (422)
T ss_pred --EE-EEEEcC----------CCccEEEEEE--EEecCcccccchHHHHHHHHHHHHHHHhccCcEE-EEEEECCCCccC
Confidence 22 221111 1111222222 222111 1113345677777777666654 466777899999
Q ss_pred CCCcccchH
Q 037878 1016 TTSGKIKRF 1024 (2280)
Q Consensus 1016 t~sGKvdR~ 1024 (2280)
|+ ||++|.
T Consensus 411 ~~-GK~~~~ 418 (422)
T TIGR02155 411 SE-GKARRV 418 (422)
T ss_pred CC-CCceEE
Confidence 88 999883
No 142
>TIGR03335 F390_ftsA coenzyme F390 synthetase. This enzyme, characterized in Methanobacterium thermoautotrophicum and found in several other methanogens, modifies coenzyme F420 by ligation of AMP (or GMP) from ATP (or GTP). On F420, it activates an aromatic hydroxyl group, which is unusual chemistry for an adenylyltransferase. This enzyme name has been attached to numbers of uncharacterized genes likely to instead act as phenylacetate CoA ligase, based on proximity to predicted indolepyruvate ferredoxin oxidoreductase (1.2.7.8) genes. The enzyme acts during transient exposure of the organism to oxygen.
Probab=99.92 E-value=2.3e-23 Score=270.47 Aligned_cols=260 Identities=18% Similarity=0.185 Sum_probs=188.2
Q ss_pred CCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 632 SQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR---YKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 632 ~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.+.++++.|.|||||||+||+|.+||+++.......... .++.++|+++...++.++.+.....+.++..|++++..
T Consensus 83 ~~~~~i~~i~~TSGTTG~Pk~v~~T~~dl~~~~~~~~r~~~~~G~~~gD~vl~~~~~~~~~g~~~~~~~~~~~Ga~vi~~ 162 (445)
T TIGR03335 83 ADWKDIYTIHETSGTSGTPKSFFLTWDDWKRYAEKYARSFVSQGFTAGDRMVICASYGMNVGANTMTLAAREVGMSIIPE 162 (445)
T ss_pred CCHHHeEEEEeCCCCCCCcceeeecHHHHHHHHHHHHHHHHHcCCCCCCeEEEEecCCcchhHHHHHHHHHHcCCEEEcC
Confidence 346789999999999999999999999987766555444 47889999999999888777655556667788876532
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
. .....++.++++++|.+.++|+.+..+.+........ .+.+++|.+++|||++++++.+++.+.+
T Consensus 163 ~------~~~~~~~~i~~~~~t~l~~~ps~ll~La~~~~~~g~~---~~~~~lr~ii~gGE~l~~~~r~~ie~~~----- 228 (445)
T TIGR03335 163 G------KCTFPIRIIESYRPTGIVASVFKLLRLARRMKAEGID---PAESSIRRLVVGGESFADESRNYVEELW----- 228 (445)
T ss_pred C------chhHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCC---cccCcceEEEEcCCCCCHHHHHHHHHHh-----
Confidence 2 2234678899999999988888777776654433211 1246899999999999999888887764
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++.++|.||+||+++.+.|.... | .-.+-+...+.|+|++++ +++|+|+.|||++..-.-.
T Consensus 229 -g~~v~~~YG~TE~~~~~~c~~~~--------------g-~h~~~d~~~vEIvDp~~~-~~vp~Ge~GELvvT~L~~~-- 289 (445)
T TIGR03335 229 -GCEVYNTYGSTEGTMCGECQAVA--------------G-LHVPEDLVHLDVYDPRHQ-RFLPDGECGRIVLTTLLKP-- 289 (445)
T ss_pred -CCcEEecCChhhhhheEEecCCC--------------C-ccccCCceEEEEEcCCCC-CCCcCCCceEEEEEecCCC--
Confidence 57899999999986432221110 1 011224578999999875 4458999999999873210
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEE-E-C----C----eEEEEecCCCeEEECCeeechHHHHHHHHhccCC
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRI-I-D----G----KFFITGRIKDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~-~-d----G----~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
. +.+.+ |. -=|||||++++ . + | .+...||.||+++++|.+|+|.+||++|.+++++
T Consensus 290 ----~--~r~~~---Pl-----iRYrtgD~~~~~~~~~C~CGr~~~r~~~~gR~dd~~~~~g~~~~p~~ie~~l~~~~~~ 355 (445)
T TIGR03335 290 ----G--ERCGS---LL-----INYDTEDTTVVISRDRCPCGRTHMRILNPEREAETIWISGVPFNRVDVERAVFQRENM 355 (445)
T ss_pred ----C--ccCCc---eE-----EEeecCceEEEecCCCCCCCCCcceeCCCcccCceEEECCEEeCHHHHHHHHhccCCC
Confidence 0 00001 00 12799999997 3 2 2 2555799999999999999999999999995433
No 143
>COG2907 Predicted NAD/FAD-binding protein [General function prediction only]
Probab=99.92 E-value=6.7e-24 Score=239.63 Aligned_cols=351 Identities=20% Similarity=0.267 Sum_probs=229.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeec--CccceeeeecccceEEecCCC----Cceee
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIE--EAGAELEEMDSHKLALIDGST----GEFQD 93 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~--~~g~~~~~~~~~~~~~~~~~~----~~~~~ 93 (2280)
..++|+|||+|+|||||||.|+++- +||+||+++|+|||.+|+..+ ++| ...+++++.+++... .++..
T Consensus 7 ~r~~IAVIGsGisGLSAA~~Ls~rh--dVTLfEA~~rlGGha~Tv~~~~d~~g---~~vDtGfiVyn~~tYpnl~~Lf~~ 81 (447)
T COG2907 7 PRRKIAVIGSGISGLSAAWLLSRRH--DVTLFEADRRLGGHANTVAGNTDGGG---VFVDTGFIVYNERTYPNLTRLFKT 81 (447)
T ss_pred CCcceEEEcccchhhhhHHhhhccc--ceEEEeccccccCccceeeccccCCc---eeecceeEEecCCCcchHHHHHHH
Confidence 3578999999999999999999883 799999999999999998743 333 345777888877543 23344
Q ss_pred cccccchhhhhccccccchhhhhccc----------------------------cchh-----hHHHhhhhhhhHHHHHc
Q 037878 94 IKVADDYVSVISLTLELQDKAKESGR----------------------------IGVH-----AVSDLASDLTPTYLEDR 140 (2280)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~----------------------------~~~~-----~~~~~~~~~~~~~l~~~ 140 (2280)
+++.. -...|++++......+++.. ++.. ......+....+|+.++
T Consensus 82 iGv~t-~as~Msf~v~~d~gglEy~g~tgl~~L~aqk~n~l~pRf~~mlaeiLrf~r~~~~~~d~~~~~~~tl~~~L~~~ 160 (447)
T COG2907 82 IGVDT-KASFMSFSVSLDMGGLEYSGLTGLAGLLAQKRNLLRPRFPCMLAEILRFYRSDLAPSDNAGQGDTTLAQYLKQR 160 (447)
T ss_pred cCCCC-cccceeEEEEecCCceeeccCCCccchhhccccccchhHHHHHHHHHHHhhhhccchhhhcCCCccHHHHHHhc
Confidence 44443 33445555554443333321 1110 00001112235777777
Q ss_pred CCCC-------cchhhhhhhhcccccccccccHHHHHHHHhhcc------CCeEEEEcCCHHHHHHHHHhHCCCceEeCc
Q 037878 141 GFKS-------VPKSVAYGYTASGYGFVQDMPYAYIHEFTRTSM------AGKIRRFKGGYTSLWQKLSKYLPTEVHCNS 207 (2280)
Q Consensus 141 ~~~~-------l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~gG~~~l~~~la~~lg~~I~l~t 207 (2280)
++.. .|+....|.+.. .+...+|...+..|+.... .+.|+++.||....+++|++.++.+|++++
T Consensus 161 ~f~~af~e~~l~P~~aaiwstp~--~d~~~~pa~~~~~f~~nhGll~l~~rp~wrtV~ggS~~yvq~laa~~~~~i~t~~ 238 (447)
T COG2907 161 NFGRAFVEDFLQPLVAAIWSTPL--ADASRYPACNFLVFTDNHGLLYLPKRPTWRTVAGGSRAYVQRLAADIRGRIETRT 238 (447)
T ss_pred CccHHHHHHhHHHHHHHHhcCcH--hhhhhhhHHHHHHHHhccCceecCCCCceeEcccchHHHHHHHhccccceeecCC
Confidence 7665 344444444332 3467777777766664333 688999999999999999999988999999
Q ss_pred ceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChhhHhhhccCCCChhhHhhhccceeeeeEE
Q 037878 208 EVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQVMDMDELEKELFSKVQTIDYYT 287 (2280)
Q Consensus 208 ~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~ 287 (2280)
+|.+|++-.+|+ .+...+| ++-+||.||+| +. +.+......+.+++|..+++.+.|..+-+
T Consensus 239 ~V~~l~rlPdGv--~l~~~~G--~s~rFD~vViA--------------th-~dqAl~mL~e~sp~e~qll~a~~Ys~n~a 299 (447)
T COG2907 239 PVCRLRRLPDGV--VLVNADG--ESRRFDAVVIA--------------TH-PDQALALLDEPSPEERQLLGALRYSANTA 299 (447)
T ss_pred ceeeeeeCCCce--EEecCCC--Cccccceeeee--------------cC-hHHHHHhcCCCCHHHHHHHHhhhhhhcee
Confidence 999999988866 5666788 45699999997 33 33334334677888999999999999999
Q ss_pred EEEeecCcccCCceeEEEecCCCC---CCCCCCcce---eEEee---cCCCcEEEEecCCCCCCChHHHHHHHHHHHHhh
Q 037878 288 TVLKITGLEHLPVGFYYFGEYMDD---PATIGHPVA---MQKFF---ADTDIFLFWSYGNSVDITGPTVTEVAIKTVENM 358 (2280)
Q Consensus 288 ~i~~~~~l~~~p~~~~~~~~~~~~---~~~~~~~~~---~~~~~---~~~~~~~~~~~g~~~~~s~~e~~~~i~~~L~~~ 358 (2280)
+++.+..+ +|....-+..+... ......+.. +..+. ...+++ ...++....+...
T Consensus 300 Vlhtd~~l--mPrR~~Awaswny~~~~~~e~~~~~lty~mN~lq~l~~~~~~~--vtln~~~~~dpa~------------ 363 (447)
T COG2907 300 VLHTDASL--MPRRLRAWASWNYLGTVQWELCQGSLTYWMNRLQALISVRDYF--VTLNNRPWVDPAH------------ 363 (447)
T ss_pred EEeecccc--cccccccccccceeccccccccCcceeccHHHhhcccCCcceE--EEecCCcccChHH------------
Confidence 99999876 45433222222211 111111110 11111 122221 1122222122221
Q ss_pred cCccceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCceeccccccccccccCchhhHHhh
Q 037878 359 GGVIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTYYVGGLMAFELTERNSSYSMALM 423 (2280)
Q Consensus 359 ~~~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~G~~~~~~~~~~~~~y~~~l~ 423 (2280)
++.+..+.||.+++++++ .++...++||.+++||||+||+-+|+|+..+..+...
T Consensus 364 -------v~~~~ty~HPlf~~~avr---aqq~l~alqg~~~twfcgAy~g~GFHeDg~~aGl~va 418 (447)
T COG2907 364 -------VIAERTYPHPLFDPEAVR---AQQELWALQGARRTWFCGAYFGRGFHEDGLQAGLAVA 418 (447)
T ss_pred -------hhHHhhcCCcCCCHHHHH---HHHHHHhhhcCCCCCcchhhhccccchhhhhhHHHHH
Confidence 222334789999999998 5665588999999999999999999999876665544
No 144
>COG1232 HemY Protoporphyrinogen oxidase [Coenzyme metabolism]
Probab=99.81 E-value=1e-18 Score=217.25 Aligned_cols=205 Identities=17% Similarity=0.206 Sum_probs=139.7
Q ss_pred CeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCCh
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSK 258 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~ 258 (2280)
+.+.+++||+++|++++++++..+|++|++|++|.++.+++ .+.+.+| +.+.||.||+|+|++
T Consensus 205 ~~~~~~~gG~~~l~~al~~~l~~~i~~~~~V~~i~~~~~~~--~~~~~~g--~~~~~D~VI~t~p~~------------- 267 (444)
T COG1232 205 EKFGYLRGGLQSLIEALAEKLEAKIRTGTEVTKIDKKGAGK--TIVDVGG--EKITADGVISTAPLP------------- 267 (444)
T ss_pred ccccccCccHHHHHHHHHHHhhhceeecceeeEEEEcCCcc--EEEEcCC--ceEEcceEEEcCCHH-------------
Confidence 35778999999999999999988899999999999986655 5555677 468999999995544
Q ss_pred hhHhhhccCCCChhhHhhhccceeeeeEEEEEee--cCcccCCceeEEEecCCCCCCCCCCcceeEEeecCC--CcEEEE
Q 037878 259 PTESETQVMDMDELEKELFSKVQTIDYYTTVLKI--TGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFFADT--DIFLFW 334 (2280)
Q Consensus 259 ~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~--~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~ 334 (2280)
....+..- ......+....+....++++.. +..+.+|++++++.+..+.. ..+..+...++.... +..+++
T Consensus 268 -~l~~ll~~---~~~~~~~~~~~~~s~~~vv~~~~~~~~~~~~~~~g~~iad~~~~-~~a~~~~S~~~p~~~p~g~~ll~ 342 (444)
T COG1232 268 -ELARLLGD---EAVSKAAKELQYTSVVTVVVGLDEKDNPALPDGYGLLIADDDPY-ILAITFHSNKWPHEAPEGKTLLR 342 (444)
T ss_pred -HHHHHcCC---cchhhhhhhccccceEEEEEEeccccccCCCCceEEEEecCCCc-ceeEEEecccCCCCCCCCcEEEE
Confidence 33333221 1223344555554444444433 23344688888888887644 555555555554322 443333
Q ss_pred ec--CCC----CCCChHHHHHHHHHHHHhhc---CccceEEEeecCCCCcccchhhhcchhhHHHHHHhc-CcCCceecc
Q 037878 335 SY--GNS----VDITGPTVTEVAIKTVENMG---GVIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQ-GQRNTYYVG 404 (2280)
Q Consensus 335 ~~--g~~----~~~s~~e~~~~i~~~L~~~~---~~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lq-g~~~~~~~G 404 (2280)
.+ +.. ..++|||+.+.++++|++++ ..|.+..+.||...+|+|...+.+. .+.+...++ .+.++..+|
T Consensus 343 ~~~~~~g~~~~~~~~dee~~~~~l~~L~~~~~~~~~~~~~~v~r~~~~~PqY~vG~~~~--~~~ir~~l~~~y~gi~~~G 420 (444)
T COG1232 343 VEFGGPGDESVSTMSDEELVAAVLDDLKKLGGINGDPVFVEVTRWKYAMPQYEVGHLDR--LEPIRAALKGAYPGIKSVG 420 (444)
T ss_pred EEeecCCCcchhccCHHHHHHHHHHHHHHHcCcCcchhheeeeeccccCCccchhHHHH--HHHHHHhhccccCCeEEec
Confidence 22 221 34678999999999999984 3377899999999999999999874 555544565 345666666
Q ss_pred ccc
Q 037878 405 GLM 407 (2280)
Q Consensus 405 ~~~ 407 (2280)
+++
T Consensus 421 ~~~ 423 (444)
T COG1232 421 RYG 423 (444)
T ss_pred cCC
Confidence 654
No 145
>TIGR03089 conserved hypothetical protein TIGR03089. This protein family is found, so far, only in the Actinobacteria (Streptomyces, Mycobacterium, Corynebacterium, Nocardia, Propionibacterium, etc.) and never more than one to a genome. Members show twilight-level sequence similarity to family of AMP-binding enzymes described by Pfam model pfam00501.
Probab=99.81 E-value=7.3e-19 Score=205.95 Aligned_cols=211 Identities=11% Similarity=0.015 Sum_probs=147.9
Q ss_pred HHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHh-cCCCCCCCCCEEEEEeCCCHhHHHHHHHHHHc
Q 037878 475 LKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLT-SRKPVIKPGDRVLLVYVPGLDFVDAFFGCMRA 553 (2280)
Q Consensus 475 l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~-~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~a 553 (2280)
|.+.+++ +|+++|+++.++++.+.+++||+||.++++++|+.|++ . |+++||||+|+++|+++++++++||+++
T Consensus 2 ~~~~~~~--~p~~~al~~~~~~~~~~~~~Ty~~l~~~~~~~a~~L~~~~---Gv~~GdrV~i~~~n~~~~~~~~~a~~~~ 76 (227)
T TIGR03089 2 LSPLLAA--DPASPRLTFYDDATGERVELSAATLANWVAKTANLLQDEL---DAEPGSRVALDLPAHWQTAVWLLAAWST 76 (227)
T ss_pred hhhhhhh--CCCCcEEEEEcCCCCeeEEEEHHHHHHHHHHHHHHHHHHh---CCCCCCEEEEECCCCHHHHHHHHHHHHc
Confidence 3445554 48999998764332123579999999999999999997 7 8999999999999999999999999999
Q ss_pred CCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-C-----------CC-CCccccccccccccc
Q 037878 554 KVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-W-----------PN-LPWLHTDSWVKNSKN 620 (2280)
Q Consensus 554 Ga~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~-----------~~-~~~~~~~~~~~~~~~ 620 (2280)
|++++|++. +++++++++.+......... . .. .......++.....
T Consensus 77 G~v~vp~n~--------------------s~a~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 135 (227)
T TIGR03089 77 GVEVVLAGD--------------------PDADVVVTGPDRLAAAAGSGEVVALSLDPLGRRVAGELPPGVIDFAPEVR- 135 (227)
T ss_pred CCEEEeCCC--------------------CCCCEEEeCcchhhhcccCCceEEEeccccccCCCCCCCCcccchhhhhh-
Confidence 999999953 23344444333222111000 0 00 00000001110000
Q ss_pred cccccccccC-CCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHH
Q 037878 621 LLAENVVCFT-ESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAM 699 (2280)
Q Consensus 621 ~~~~~~~~~~-~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L 699 (2280)
. ........ ...++|++.|+||||+ +|+++.... ...+++++|+++ .+|++|..|+...++.++
T Consensus 136 ~-~~~~~~~~~~~~~~D~a~l~yTsg~---------~~~~~~~~~----~~~~l~~~D~~l-~~Pl~H~~gl~~~~~~~l 200 (227)
T TIGR03089 136 V-HGDQFAPYEPPDATAPALVAGGGEW---------TGAELVAAA----RAAGLPPGDRVL-VLAWTDLEDFLATLLAPL 200 (227)
T ss_pred c-cCCCCCCCCCCCCCcceeeeccccc---------cHHHHHHHH----hhcCCCCCCeEE-ecCCCchHHHHHHHHHHh
Confidence 0 00111111 3456899999999986 677765544 556789999999 999999999988999999
Q ss_pred HccceEEEeCccccccCHHHHHHHHhhccee
Q 037878 700 VGGSTAILFSPLTFIKNPLLWLETMSKYRAT 730 (2280)
Q Consensus 700 ~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt 730 (2280)
..|+++++++ .| +|..+++.++++++|
T Consensus 201 ~~G~t~v~~~--rF--d~~~~l~~i~~~~vT 227 (227)
T TIGR03089 201 AAGGSLVLVT--HP--DPARLDQIAETERVT 227 (227)
T ss_pred ccCceEEEec--CC--CHHHHHHHHHhhcCC
Confidence 9999999984 34 999999999999986
No 146
>COG1541 PaaK Coenzyme F390 synthetase [Coenzyme metabolism]
Probab=99.80 E-value=1.6e-17 Score=202.30 Aligned_cols=325 Identities=23% Similarity=0.237 Sum_probs=216.4
Q ss_pred CCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeC
Q 037878 633 QPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR---YKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFS 709 (2280)
Q Consensus 633 ~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~ 709 (2280)
.-++...|--||||||+|+-+..|+..+.......++. .+...+|++....-+....+-......+--.|++++-..
T Consensus 88 ~~~~i~~ihaSSGTTGkPt~~~~t~~D~~~wa~~~aR~~~~~g~~~gd~v~~~~~yGl~tgg~~~~~ga~rig~~vip~~ 167 (438)
T COG1541 88 PKEEIVRIHASSGTTGKPTVFGYTAKDIERWAELLARSLYSAGVRKGDKVQNAYGYGLFTGGLGLHYGAERIGATVIPIS 167 (438)
T ss_pred cccceEEEEccCCCCCCceeeecCHHHHHHHHHHHHHHHHHccCCCCCEEEEEeeeccccCCchhHHHHHhhCEEEEccC
Confidence 44667779999999999999999999876665555544 456778877655442222221122223333455544222
Q ss_pred ccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCC
Q 037878 710 PLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLS 789 (2280)
Q Consensus 710 ~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~ 789 (2280)
+ .+-+.-.+++..+++|++.++|+.+..+++..+..... .+-.++|.+++|+|+++++..+.+.+.+
T Consensus 168 ~----g~~~~~~~l~~df~~tvI~~tps~~l~lae~~~~~G~~---~~~~~lk~~i~gaE~~see~R~~ie~~~------ 234 (438)
T COG1541 168 G----GNTERQLELMKDFKPTVIAATPSYLLYLAEEAEEEGID---PDKLSLKKGIFGAEPWSEEMRKVIENRF------ 234 (438)
T ss_pred C----ccHHHHHHHHHhcCCcEEEEChHHHHHHHHHHHHcCCC---hhhcceeEEEEecccCCHHHHHHHHHHh------
Confidence 2 25577889999999999999999999999888776411 3345799999999999999999998886
Q ss_pred CcccccccCccccccce--ecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCccc
Q 037878 790 QGVMAPGYGLAENCVFV--SCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGI 867 (2280)
Q Consensus 790 ~~~v~n~YG~TE~~~~~--~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~ 867 (2280)
++..++.||.||..+.. -|....+.. ..-+..-+.|+||++++.+ +.|+.|||++..-. +
T Consensus 235 g~~~~diYGltE~~g~g~~eC~~~~glh---------------i~eD~~~~Ei~dP~t~e~l-~dge~GelV~T~L~--~ 296 (438)
T COG1541 235 GCKAFDIYGLTEGFGPGAGECTERNGLH---------------IWEDHFIFEIVDPETGEQL-PDGERGELVITTLT--K 296 (438)
T ss_pred CCceeeccccccccCCcccccccccCCC---------------cchhhceeeeecCCcCccC-CCCCeeEEEEEecc--c
Confidence 56789999999997652 222211111 1225678899999987555 79999999997622 1
Q ss_pred ccCCCchhhHHHHhhhccCCCCCceeecCcEEEEEC-----Ce-----EEEEecCCCeEEECCeeechHHHHHHHHhccC
Q 037878 868 GYWGREELSQITFRNELQNNRGRKYTRTGDLGRIID-----GK-----FFITGRIKDLIIVAGRNVYSADVEKTVESSTE 937 (2280)
Q Consensus 868 GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~d-----G~-----l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~ 937 (2280)
+.+ |. -=|||||++++.+ |. ..+.||.||+++++|.+|+|..||.+|.+.++
T Consensus 297 ----------~~~---Pl-----IRYrtgDit~i~~~~C~cGr~~~ri~~I~GR~dD~l~~~G~~vfp~~ie~~l~~~~~ 358 (438)
T COG1541 297 ----------EGM---PL-----IRYRTGDITVILSDPCGCGRTHRRIERIEGRSDDMLIVRGVNVFPSQIERVLLQIPE 358 (438)
T ss_pred ----------cCc---ce-----EEEEcCCeeEecccCCCCCCccccccccCcccccEEEECCEEeCHHHHHHHHhcccC
Confidence 111 00 1389999999942 32 46899999999999999999999999999988
Q ss_pred CcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHH---HHHHHHHHHHHhcCcceeEEEEecCCCcc
Q 037878 938 HIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKD---VIENIKTRVVEEHGVTVASVKLIKPRTMS 1014 (2280)
Q Consensus 938 v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~---l~~~l~~~l~~~~~~~~~~~~lv~~~~lP 1014 (2280)
+..-- -+++.. + .....+.+.++..+......+ +.+.+...+....... .-+.++.+.++|
T Consensus 359 ~~~~y-qi~~~~-~-------------~~~d~L~V~vE~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~v~~v~~g~l~ 422 (438)
T COG1541 359 VTPHY-QIILTR-N-------------GGLDELTVRVELENEAEELEDERRLAKKLIKNIKSELGVR-VEVELVEPGELP 422 (438)
T ss_pred CCceE-EEEEec-C-------------CCCceEEEEEEecCcccchHHHHHHHHHHHHHHHhhcCCc-eEEEEEecccee
Confidence 75211 122211 1 112223333444332111111 2235555555544443 345677889999
Q ss_pred CCCCcccch
Q 037878 1015 KTTSGKIKR 1023 (2280)
Q Consensus 1015 ~t~sGKvdR 1023 (2280)
+|.. |..|
T Consensus 423 r~~~-K~kr 430 (438)
T COG1541 423 RTEG-KAKR 430 (438)
T ss_pred cccC-ceeE
Confidence 9875 7655
No 147
>PLN02576 protoporphyrinogen oxidase
Probab=99.80 E-value=7.6e-18 Score=223.84 Aligned_cols=212 Identities=13% Similarity=0.141 Sum_probs=131.9
Q ss_pred CeEEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCc-cEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCC
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTT-VGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPT 256 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~-v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~ 256 (2280)
...+.++||++.|+++|++.++ .+|++|++|++|++++++ +.+.+.+.+|+ ++++||+||+|+|.+....+.+
T Consensus 229 ~~~~~~~gG~~~L~~~la~~l~~~~i~l~~~V~~I~~~~~~~~~v~~~~~~g~-~~~~ad~VI~a~P~~~l~~ll~---- 303 (496)
T PLN02576 229 QTVGSFRGGLQTLPDALAKRLGKDKVKLNWKVLSLSKNDDGGYSLTYDTPEGK-VNVTAKAVVMTAPLYVVSEMLR---- 303 (496)
T ss_pred CeeEeccchHHHHHHHHHHhhCcCcEEcCCEEEEEEECCCCcEEEEEecCCCc-eeEEeCEEEECCCHHHHHHHhc----
Confidence 3467889999999999999997 789999999999998776 76666665663 4689999999976664333322
Q ss_pred ChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC--ccc------CCceeEEEecCCCCCCCCCCcceeEEee--c
Q 037878 257 SKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG--LEH------LPVGFYYFGEYMDDPATIGHPVAMQKFF--A 326 (2280)
Q Consensus 257 ~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~--l~~------~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~ 326 (2280)
+..+..+..+.++.+.+.....+.... ++. ...++++..+..+....++..+....+. .
T Consensus 304 -----------~~~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~lg~~~~s~~~p~~~ 372 (496)
T PLN02576 304 -----------PKSPAAADALPEFYYPPVAAVTTSYPKEAVKRERLIDGPLEGFGQLHPRKQGVKTLGTIYSSSLFPDRA 372 (496)
T ss_pred -----------ccCHHHHHHhccCCCCceEEEEEEEchHHcccccccCCCCCceEEEccCCCCCceEEEEeecCcCCCCC
Confidence 122233445555555555444433221 111 1135666655443322222121111111 1
Q ss_pred CCCcEEEEec-C-CC----CCCChHHHHHHHHHHHHhhcC-----ccceEEEeecCCCCcccchhhhcchhhHHHHHHhc
Q 037878 327 DTDIFLFWSY-G-NS----VDITGPTVTEVAIKTVENMGG-----VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQ 395 (2280)
Q Consensus 327 ~~~~~~~~~~-g-~~----~~~s~~e~~~~i~~~L~~~~~-----~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lq 395 (2280)
+.+...+..| + .. .+++++++.+.++++|+++.+ .|+.....+|....|+|++...+. .+++...++
T Consensus 373 ~~~~~~l~~~~~~~~~~~~~~~s~ee~~~~~~~~L~~~~g~~~~~~p~~~~~~~w~~a~P~~~~g~~~~--~~~~~~~l~ 450 (496)
T PLN02576 373 PEGRVLLLNYIGGSRNTGIASASEEELVEAVDRDLRKLLLKPGAPPPKVVGVRVWPKAIPQYLLGHLDV--LEAAEKMEK 450 (496)
T ss_pred CCCCEEEEEEECCCCCcccccCCHHHHHHHHHHHHHHHhCCCCCCCCcEEEEeEcCcccCCCCcCHHHH--HHHHHHHHH
Confidence 1222222222 2 21 447899999999999999743 356677888888899999876542 445544344
Q ss_pred Cc--CCceecccccc
Q 037878 396 GQ--RNTYYVGGLMA 408 (2280)
Q Consensus 396 g~--~~~~~~G~~~~ 408 (2280)
.. .+++++|.++.
T Consensus 451 ~~~~~~l~~aG~~~~ 465 (496)
T PLN02576 451 DLGLPGLFLGGNYRG 465 (496)
T ss_pred hcCCCCEEEeccccC
Confidence 44 68999998875
No 148
>KOG3628 consensus Predicted AMP-binding protein [General function prediction only]
Probab=99.79 E-value=9.9e-18 Score=212.72 Aligned_cols=526 Identities=22% Similarity=0.328 Sum_probs=337.2
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHH-HHHhcCCCCCCCCCEEEEEeCCC--HhHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAH-KLLTSRKPVIKPGDRVLLVYVPG--LDFVDA 546 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~-~L~~~~~~Gv~~Gd~V~i~~~~s--~e~~va 546 (2280)
.+...+++...+ .+..+|.++.|+.|+ ..++||..+..++.+.|+ .|... |..++|+|.++...+ .|+++.
T Consensus 95 d~~avl~~~~nh--s~~~ta~i~id~kgk-~~~~twdkl~~rA~k~a~~~l~ks---gl~~~~~vvL~Y~~~e~ie~~is 168 (1363)
T KOG3628|consen 95 DIIAVLRYRRNH--SATSTAHICIDKKGK-ATSITWDKLLNRAEKVAHVELNKS---GLKPGDRVVLYYRKCEAIEFLIS 168 (1363)
T ss_pred chHHHHHhhccC--CCCCceEEEEcCCCc-eeeeeHHHHHHHHHhhccHHhhcc---CCCCCcEEEEEEEhhhhhHHhhh
Confidence 344455555544 477889999999998 689999999999999999 55554 999999999999887 999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCC-----CCcccccccccccccc
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPN-----LPWLHTDSWVKNSKNL 621 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~ 621 (2280)
.++|...|.+.+|+.+.+..+. +..+.+....+++++............++. +.+....++. ..
T Consensus 169 l~gc~l~g~~~vp~~e~~s~~e-------l~~i~~~~~~~~~l~t~a~~r~~~~~~~~~s~~k~v~~w~t~~~k----~~ 237 (1363)
T KOG3628|consen 169 LFGCFLLGIVAVPLSELSSSEE-------LKDIVNPTPERVALTTEAGERAFINDNSPVSLAKAVAWWKTNDFK----GN 237 (1363)
T ss_pred hccccccceeeccchhhhhhhh-------hhcccCCCccceEeehhhhHHHhhhccCcccHHHHHHhhhccccc----ce
Confidence 9999999999999977665554 777888888888887765443222111110 0111111111 00
Q ss_pred ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHH--------------------HHHcCCCCCcEEEE
Q 037878 622 LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLM--------------------RKRYKSTSKTVLVS 681 (2280)
Q Consensus 622 ~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~--------------------~~~~~~~~~d~~l~ 681 (2280)
........+..... ..||-||++++|+--|++.+|+ +....+.+ ...++.+..++++.
T Consensus 238 ~~~~k~~~P~~~~~-~~~i~~t~s~l~~~~g~V~~~~-~~~q~r~~~~~~nt~Pa~~~~~~~~~~~~~v~~~~~~~~~l~ 315 (1363)
T KOG3628|consen 238 YTKDKIKKPRMQLP-YGYIEFTRSPLGNLIGVVYKHK-FLPQMRVLTSIPNTNPARFAAAFYGCLHAHVFPVPSEDVLLT 315 (1363)
T ss_pred eehhhccCCceeee-eEEEEEeccchhceeeeEeecc-cccchhhhhhccCcChHHHHHhhhcchhhhccccCcccceee
Confidence 00011111222222 8999999999999999999998 54433322 12234566777887
Q ss_pred EcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhccccc------ccc
Q 037878 682 WLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDK------VRS 755 (2280)
Q Consensus 682 ~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~------~~~ 755 (2280)
....+--.|++.+++.++++|.|.+-++. .+...|..|..++.+++++++..--..+..........+.. ...
T Consensus 316 ~~~~s~~lGlilGV~~alfsg~c~i~~p~-~~l~~pG~~~~l~~k~R~~~~ltd~~~Lkq~~~ny~~~p~a~~s~~k~~t 394 (1363)
T KOG3628|consen 316 NLDPSQQLGLILGVLVALFSGYCTIGCPK-EVLKPPGLIANLITKYRATWSLTDYAGLKQPVYNYQEDPKATLSFKKYKT 394 (1363)
T ss_pred ccCcccccchhhhhhhhhhcCceeecCch-hhcCCCcchhhhhccceeEEEeecccccCcccccccCCcccccchhhccC
Confidence 77777788888889999999999887764 45678899999999999999765533333322221111111 112
Q ss_pred cCCCCccEEEEecCCCCHHHHHHHHHHh-cCCCCCCccccccc-----------------CccccccceecccCCC----
Q 037878 756 FDLSSMKFLMVAAEPVRQTTVKRFVELT-RPFGLSQGVMAPGY-----------------GLAENCVFVSCAYGQG---- 813 (2280)
Q Consensus 756 ~~l~~Lr~l~~gGe~l~~~l~~~~~~~~-~~~g~~~~~v~n~Y-----------------G~TE~~~~~~~~~~~~---- 813 (2280)
.|++++|.+++.-+.+.++.-+-..+++ .+.|-.. .--.| +++|.+...-..+...
T Consensus 395 ~d~sslk~C~Vtc~~vd~~~~~ivs~~wlk~lg~~~--~~~~~~p~l~ll~hGgi~is~k~~~~~~~~~~r~p~~~~~~~ 472 (1363)
T KOG3628|consen 395 PDLSSLKGCMVTCTAVDTEFQEIVSDRWLKPLGETN--VKVVDFPILCLLWHGGIPISFKDWMEIGTVSIRRPEQMADTL 472 (1363)
T ss_pred CCccceeeeEEeeeecchHHHHHHHHhhcccccCcC--cceeechhhhhhhcCceEEEeccchhhhcccccCcccccccC
Confidence 5789999999999999987543322221 1111111 11122 2233332221111100
Q ss_pred -------------CceeecCCCc---eeeccccCCCC-CceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhh
Q 037878 814 -------------KPIILDWQGR---VCCGYVDQNDP-DVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELS 876 (2280)
Q Consensus 814 -------------~~~~~~~~g~---~~~g~vG~p~p-g~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t 876 (2280)
..+.++.... .....+|.-.| +..+.|++++.+ .++.++++|||||.++++..+||.-+..|
T Consensus 473 ~~e~ll~~~~L~~~~V~v~~e~~is~~s~kd~~~i~~g~~t~~vv~~~t~-~LC~~~eVGEIwVsS~~~~~~~~al~~~t 551 (1363)
T KOG3628|consen 473 PGEGLLSKEALKLNEVEVDTEDDISSLSVKDVLCIMPGDATLAVVNPDTN-QLCKTDEVGEIWVSSNSLGKLFYALDKQT 551 (1363)
T ss_pred ccceeeeccccccceEEEcchhhhhhcCccccceecccceEEEEeCCCcc-cccccCcceeEEEecCCcccceeeccccc
Confidence 0000000000 01111222222 466778888764 67789999999999999999999988888
Q ss_pred HHHHhhhccC-----CCCCceeecCcEEEEECCeEEEEecCCCeEEE-CCeeechHHHHHHHHhc-c------CCcCCce
Q 037878 877 QITFRNELQN-----NRGRKYTRTGDLGRIIDGKFFITGRIKDLIIV-AGRNVYSADVEKTVESS-T------EHIRPGC 943 (2280)
Q Consensus 877 ~~~f~~~~~~-----~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi-~G~rI~~~EIE~~L~~~-p------~v~~~~~ 943 (2280)
...|...+.. .....+.|||=+|++.+|.++|+|-++|++-- .|.+.+..+|-+.-..+ + +|..+..
T Consensus 552 ~~~F~~~~~~s~~~~~~n~~FmRtGLlGFv~~gki~vl~~k~d~llq~~~~~h~~d~iv~thya~~~iktV~R~v~~VF~ 631 (1363)
T KOG3628|consen 552 ENTFKATPVESSGKPPSNVPFMRTGLLGFVHNGKIYVLGLKEDGLLQVSGWRHNADDIVATHYAVELIKTVMRGVIAVFD 631 (1363)
T ss_pred cceEEeeeccccCCCCccchhhhhcceeeeeCCeEEEEEechhhhhhhhhhhhhhhhhHhhHHHHHHHHHHHhccceEEE
Confidence 8888654322 23468999999999999999999988877655 88888877665432221 1 2332222
Q ss_pred eEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC--HHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCccc
Q 037878 944 CAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD--KDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKI 1021 (2280)
Q Consensus 944 aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~--~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKv 1021 (2280)
++++- ...++++++.++..... -+....+-+.+..-+++....+.+++...||+|+-|-|
T Consensus 632 ~saf~------------------~E~~~Vv~~esP~a~e~~~~q~~~~v~q~l~~iHqv~vyCilivP~~tLPrt~~~Gi 693 (1363)
T KOG3628|consen 632 VSAFE------------------DEHIVVVVLESPDATEENSFQWMSRVFQALDSIHQVGVYCILIVPANTLPRTPLGGI 693 (1363)
T ss_pred Eeeee------------------cceEEEEEEeCcchhhhhhhhHHHHHHHHHHHHhcccceEEEEeccccCCCcccccc
Confidence 33332 12334444333332111 23344555566666777777777888899999998889
Q ss_pred chHHHHHHhhcCCCC
Q 037878 1022 KRFECLKQFVDGTLN 1036 (2280)
Q Consensus 1022 dR~~L~~~~~~~~~~ 1036 (2280)
.-.+++++|.++.+.
T Consensus 694 ~~~~~k~~F~~G~L~ 708 (1363)
T KOG3628|consen 694 HNNECKQAFLEGSLP 708 (1363)
T ss_pred ccHHHHHHHHcCCCC
Confidence 999999999999864
No 149
>TIGR00562 proto_IX_ox protoporphyrinogen oxidase. This protein is a flavoprotein and has a beta-alpha-beta dinucleotide binding motif near the amino end.
Probab=99.77 E-value=3.5e-17 Score=215.92 Aligned_cols=207 Identities=15% Similarity=0.234 Sum_probs=131.3
Q ss_pred EEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChh
Q 037878 181 IRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKP 259 (2280)
Q Consensus 181 ~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~ 259 (2280)
+.+++||+++|++++++.++ .+|++|++|++|+++++++ .+++.+| ++++||+||+|+|++....+ .|+
T Consensus 217 ~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~--~v~~~~g--~~~~ad~VI~t~P~~~~~~l--l~~---- 286 (462)
T TIGR00562 217 FQTLATGLETLPEEIEKRLKLTKVYKGTKVTKLSHRGSNY--TLELDNG--VTVETDSVVVTAPHKAAAGL--LSE---- 286 (462)
T ss_pred eEecchhHHHHHHHHHHHhccCeEEcCCeEEEEEecCCcE--EEEECCC--cEEEcCEEEECCCHHHHHHH--hcc----
Confidence 67899999999999999996 7899999999999988876 5566777 47899999999776633222 122
Q ss_pred hHhhhccCCCChhhHhhhccceeeeeEEEEEeecC--cccCCceeEEEecCCCCCCCCCCcceeEEee--cCCCcEEEEe
Q 037878 260 TESETQVMDMDELEKELFSKVQTIDYYTTVLKITG--LEHLPVGFYYFGEYMDDPATIGHPVAMQKFF--ADTDIFLFWS 335 (2280)
Q Consensus 260 ~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~--l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~ 335 (2280)
........+.++.+.......+.... ++..+.+++|+.+..+.....+..+....+. .+.+...+..
T Consensus 287 ---------~~~~~~~~l~~l~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~i~~s~~~p~~~p~g~~~l~~ 357 (462)
T TIGR00562 287 ---------LSNSASSHLDKIHSPPVANVNLGFPEGSVDGELEGFGFLISRSSKFAILGCIFTSKLFPNRAPPGKTLLTA 357 (462)
T ss_pred ---------cCHHHHHHHhcCCCCceEEEEEEEchHHcCCCCCceEEEccCCCCCceEEEEEEccccCCcCCCCcEEEEE
Confidence 22223334455555555544443221 2222356777766554322222222211111 1222222222
Q ss_pred c-CCC-----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCCCCcccchhhhcchhhHHHHHHhcC-cCCceeccc
Q 037878 336 Y-GNS-----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQG-QRNTYYVGG 405 (2280)
Q Consensus 336 ~-g~~-----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg-~~~~~~~G~ 405 (2280)
+ +.. .+++++++.+.++++|+++.+ .|....+.+|...+|++++...+. .+++...++. ..+++.+|.
T Consensus 358 ~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~gi~~~p~~~~v~rw~~a~P~~~~g~~~~--~~~i~~~l~~~~~~l~l~G~ 435 (462)
T TIGR00562 358 YIGGATDESIVDLSENEIINIVLRDLKKVLNINNEPEMLCVTRWHRAIPQYHVGHDQR--LKEARELLESAYPGVFLTGN 435 (462)
T ss_pred EeCCCCCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEeEccccCCCCCCChHHH--HHHHHHHHHhhCCCEEEecc
Confidence 2 221 347889999999999999742 267889999999999998876442 4444333443 468999998
Q ss_pred ccc
Q 037878 406 LMA 408 (2280)
Q Consensus 406 ~~~ 408 (2280)
++.
T Consensus 436 ~~~ 438 (462)
T TIGR00562 436 SFE 438 (462)
T ss_pred ccC
Confidence 865
No 150
>PRK12416 protoporphyrinogen oxidase; Provisional
Probab=99.76 E-value=5.5e-17 Score=213.51 Aligned_cols=210 Identities=15% Similarity=0.168 Sum_probs=129.6
Q ss_pred CeEEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCC
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTS 257 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~ 257 (2280)
..+++++||+++|+++|++.++ ++|++|++|++|+.+++++ .+++.+| +++.||+||+|+|......+.+.|+.+
T Consensus 216 ~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~--~v~~~~g--~~~~ad~VI~a~p~~~~~~ll~~~~l~ 291 (463)
T PRK12416 216 KKFVSFKGGLSTIIDRLEEVLTETVVKKGAVTTAVSKQGDRY--EISFANH--ESIQADYVVLAAPHDIAETLLQSNELN 291 (463)
T ss_pred CceEeeCCCHHHHHHHHHHhcccccEEcCCEEEEEEEcCCEE--EEEECCC--CEEEeCEEEECCCHHHHHhhcCCcchh
Confidence 4577899999999999999985 4799999999999988865 5666677 468999999998777555554433221
Q ss_pred hhhHhhhccCCCChhhHhhhccceeeeeEEEEEeec-C-cccCCceeEEEecCCCCCCCCCCcceeEEee--cCCCcEEE
Q 037878 258 KPTESETQVMDMDELEKELFSKVQTIDYYTTVLKIT-G-LEHLPVGFYYFGEYMDDPATIGHPVAMQKFF--ADTDIFLF 333 (2280)
Q Consensus 258 ~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~-~-l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 333 (2280)
..+.++.+.......+..+ . ....+.++++..+..+.....+..+....|. .+....++
T Consensus 292 -----------------~~~~~~~~~~~~~v~l~~~~~~~~~~~~g~G~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~l~ 354 (463)
T PRK12416 292 -----------------EQFHTFKNSSLISIYLGFDILDEQLPADGTGFIVTENSDLHCDACTWTSRKWKHTSGKQKLLV 354 (463)
T ss_pred -----------------HHHhcCCCCceEEEEEEechhhcCCCCCceEEEeeCCCCCeEEEEEeecCCCCCcCCCCeEEE
Confidence 1122233333333322222 1 1111356777766554322111111211121 12222223
Q ss_pred E-ecC---CC----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCCCCcccchhhhcchhhHHHHHHhcC-cCCce
Q 037878 334 W-SYG---NS----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQG-QRNTY 401 (2280)
Q Consensus 334 ~-~~g---~~----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg-~~~~~ 401 (2280)
. +++ .. .+++++|+.+.++++|+++.+ .|....+.+|....|++...+.+ ..+.+...++. .++++
T Consensus 355 ~~~~~~~~~~~~~~~~~~dee~~~~~~~~L~~~lG~~~~p~~~~v~~W~~a~P~y~~~~~~--~~~~~~~~l~~~~~~l~ 432 (463)
T PRK12416 355 RMFYKSTNPVYETIKNYSEEELVRVALYDIEKSLGIKGEPEVVEVTNWKDLMPKYHLEHNQ--AVQSLQEKMMNLYPNIY 432 (463)
T ss_pred EEEeCCCCCCchhhhcCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEccccCCCcCcCHHH--HHHHHHHHHHhhCCCeE
Confidence 3 332 11 346899999999999999743 47788999999999999766544 13333223432 47999
Q ss_pred eccccccccc
Q 037878 402 YVGGLMAFEL 411 (2280)
Q Consensus 402 ~~G~~~~~~~ 411 (2280)
++|+++.-..
T Consensus 433 ~aG~~~~g~~ 442 (463)
T PRK12416 433 LAGASYYGVG 442 (463)
T ss_pred Eecccccccc
Confidence 9998865433
No 151
>COG1231 Monoamine oxidase [Amino acid transport and metabolism]
Probab=99.75 E-value=2.3e-17 Score=198.51 Aligned_cols=203 Identities=13% Similarity=0.081 Sum_probs=126.4
Q ss_pred CeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCCh
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSK 258 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~ 258 (2280)
...+...|||+.|.++++++++..|+++++|.+|.+.+++| +|++.+. .++++|.||+|+|+.++.+|+|.|..++
T Consensus 199 ~~~~~~~GGmd~la~Afa~ql~~~I~~~~~V~rI~q~~~gV--~Vt~~~~--~~~~ad~~i~tiPl~~l~qI~f~P~l~~ 274 (450)
T COG1231 199 TQMLQRLGGMDQLAEAFAKQLGTRILLNEPVRRIDQDGDGV--TVTADDV--GQYVADYVLVTIPLAILGQIDFAPLLPA 274 (450)
T ss_pred chhhccCccHHHHHHHHHHHhhceEEecCceeeEEEcCCeE--EEEeCCc--ceEEecEEEEecCHHHHhhcccCCCCCH
Confidence 33444459999999999999999999999999999999966 6777673 3789999999999999999999999999
Q ss_pred hhHhhhccCCCChhhHhhh---ccceeeee-EE-EEEeecCcccCCceeEEEecCCCCCCCCCCcceeE-EeecCCCcEE
Q 037878 259 PTESETQVMDMDELEKELF---SKVQTIDY-YT-TVLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQ-KFFADTDIFL 332 (2280)
Q Consensus 259 ~~~~~l~~~~l~~~~k~~~---~~~~~~~~-~~-~i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 332 (2280)
+..+.+...++....|... +.|+.... +. ..+.+. +..+..+.++ . ...+..+-+. +..++.. .
T Consensus 275 ~~~~a~~~~~y~~~~K~~v~f~rpFWee~~~l~G~~~tD~-----~~~~i~~~s~-~--~~~G~gVl~g~~~~g~~A--~ 344 (450)
T COG1231 275 EYKQAAKGVPYGSATKIGVAFSRPFWEEAGILGGESLTDL-----GLGFISYPSA-P--FADGPGVLLGSYAFGDDA--L 344 (450)
T ss_pred HHHHHhcCcCcchheeeeeecCchhhhhcccCCceEeecC-----CcceEecCcc-c--cCCCceEEEeeeeccccc--e
Confidence 9999998888877666432 22332222 22 222222 3223322222 1 1111111111 1111111 1
Q ss_pred EEecCCCCCCChHHHHHHHHHHHHhhcCc-----cceEEEeecCC------CCcccchhhhcchhhHHHHHHhcCcCCce
Q 037878 333 FWSYGNSVDITGPTVTEVAIKTVENMGGV-----IENVVLQRRFK------YFPHVNSKDMKDGFYDRLEYELQGQRNTY 401 (2280)
Q Consensus 333 ~~~~g~~~~~s~~e~~~~i~~~L~~~~~~-----p~~~~~~~~~~------~~p~~s~~~~~~g~~~~l~~~lqg~~~~~ 401 (2280)
.+ ..++++|.++.++..++++-++ .+.....+|.. +..-+++...+ -+|..+ ..+...++
T Consensus 345 ~~-----~~~~~~~r~~~vl~~l~~~~g~~a~~~f~~~~~~~W~~dpwt~G~~aa~~~g~~~-~~~~~l---~~p~gRIh 415 (450)
T COG1231 345 VI-----DALPEAERRQKVLARLAKLFGDEAADPFDYGASVDWSKDPWTLGGTAAYPPGQRT-KLYPTL---PAPHGRIH 415 (450)
T ss_pred eE-----ecCCHHHHHHHHHHhHhhhCChhhccccccceeeecccCCcCCccccccCCcccc-cccccc---cCCCCceE
Confidence 11 4578999999999999998542 22223334321 23334444433 123333 46667777
Q ss_pred ecc
Q 037878 402 YVG 404 (2280)
Q Consensus 402 ~~G 404 (2280)
|+|
T Consensus 416 ~Ag 418 (450)
T COG1231 416 FAG 418 (450)
T ss_pred Eee
Confidence 776
No 152
>PRK11883 protoporphyrinogen oxidase; Reviewed
Probab=99.75 E-value=5.4e-17 Score=213.87 Aligned_cols=208 Identities=22% Similarity=0.310 Sum_probs=123.2
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCC-ceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPT-EVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPT 256 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~-~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~ 256 (2280)
...++.+++|++.+++++++.++. +|++|++|++|+.+++++ .+.+.+| ++++||+||+|+|+++...+.+.|
T Consensus 210 ~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~--~v~~~~g--~~~~~d~vI~a~p~~~~~~l~~~~-- 283 (451)
T PRK11883 210 KGVFGTLKGGLQSLIEALEEKLPAGTIHKGTPVTKIDKSGDGY--EIVLSNG--GEIEADAVIVAVPHPVLPSLFVAP-- 283 (451)
T ss_pred CCceEeeccHHHHHHHHHHHhCcCCeEEeCCEEEEEEEcCCeE--EEEECCC--CEEEcCEEEECCCHHHHHHhccCh--
Confidence 346778999999999999999976 899999999999988765 5666677 478999999998887655552211
Q ss_pred ChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeec-CcccCCceeEEEecCCCCCCCCCCcceeEEe--ecCCC-cEE
Q 037878 257 SKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKIT-GLEHLPVGFYYFGEYMDDPATIGHPVAMQKF--FADTD-IFL 332 (2280)
Q Consensus 257 ~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~-~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~-~~~ 332 (2280)
+... .+..+.+.......+... .++..+..++++.+..++....+..+....+ ..+.+ ...
T Consensus 284 --~~~~-------------~~~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~~ 348 (451)
T PRK11883 284 --PAFA-------------LFKTIPSTSVATVALAFPESATNLPDGTGFLVARNSDYTITACTWTSKKWPHTTPEGKVLL 348 (451)
T ss_pred --hHHH-------------HHhCCCCCceEEEEEEeccccCCCCCceEEEecCCCCCcEEEEEeEcCcCCCCCCCCcEEE
Confidence 1111 122233333222222222 1122344455544322211111110111011 11111 222
Q ss_pred EEecCCC-----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCceecc
Q 037878 333 FWSYGNS-----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTYYVG 404 (2280)
Q Consensus 333 ~~~~g~~-----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~G 404 (2280)
...++.. .+++++++.+.+++.|+++.+ .++.....+|...+|.+++...+. .+++...+....++|++|
T Consensus 349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~~~rw~~a~p~~~~~~~~~--~~~l~~~l~~~~~l~~aG 426 (451)
T PRK11883 349 RLYVGRPGDEAVVDATDEELVAFVLADLSKVMGITGDPEFTIVQRWKEAMPQYGVGHIER--VAELRAGLPHYPGLYVAG 426 (451)
T ss_pred EEecCCCCCchhccCCHHHHHHHHHHHHHHHhCCCCCceEEEEeecCccCCCCCccHHHH--HHHHHHhhhhCCCEEEEC
Confidence 2223321 456889999999999999832 366788888998899888765431 333323333346899999
Q ss_pred cccc
Q 037878 405 GLMA 408 (2280)
Q Consensus 405 ~~~~ 408 (2280)
.++.
T Consensus 427 ~~~~ 430 (451)
T PRK11883 427 ASFE 430 (451)
T ss_pred cccC
Confidence 8753
No 153
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=99.75 E-value=2.4e-17 Score=193.95 Aligned_cols=111 Identities=18% Similarity=0.196 Sum_probs=79.7
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.+... ....+.+.||++|.|+.++.+ .++++|||+|+||.++.|.++++||++++|+++|
T Consensus 102 t~IG~~~~i~~~--~~I~hd~~IG~~v~i~~~~~i-----------~g~v~Igd~a~Ig~~a~V~~~~~IG~~a~Vg~gs 168 (255)
T PRK12461 102 TRIGNDNLLMAY--SHVAHDCQIGNNVILVNGALL-----------AGHVTVGDRAIISGNCLVHQFCRIGALAMMAGGS 168 (255)
T ss_pred EEEcccceeccC--cEECCCCEECCCcEECCCCcc-----------CCceEECCCeEEeCCCEECCCCEECCCcEECCCc
Confidence 467777776655 222334455555555554444 3789999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce------eeecccchhhHHHHHhHHHHHHHHHh
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV------MIKNTMHALDDRIEEMDMKYKKIVGN 1700 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~------~~~~~~~~~~~~le~~~p~~~~~v~~ 1700 (2280)
+|++| +||++++.|+||.. -++|.. ...+.++.++..|+.+.++
T Consensus 169 ~V~~d--Vpp~~i~~G~pa~~~~~n~vgl~r~g-~~~~~~~~~~~~~~~~~~~ 218 (255)
T PRK12461 169 RISKD--VPPYCMMAGHPTNVHGLNAVGLRRRG-FSSRAIRALKRAYKIIYRS 218 (255)
T ss_pred eEecc--CCCCeEEecCcceEeccchhhhhhcC-CCHHHHHHHHHHHHHHHhc
Confidence 99999 99999999999742 123332 3444555666667666543
No 154
>COG1044 LpxD UDP-3-O-[3-hydroxymyristoyl]
Probab=99.74 E-value=1.4e-17 Score=192.67 Aligned_cols=97 Identities=22% Similarity=0.196 Sum_probs=77.8
Q ss_pred CeeCCCceeccCCcccCC--------cceEECCCcEeCCCcEEeecccCCCce-EeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1574 AKIGRYCSIRAINPVSCP--------QQVTLGAGVHLGDFSRIIPGFYSSIGF-IFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~--------~~~~iG~~~~i~~~~~i~~~~~~~~~~-~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
+.||++|||+.++.++.. +.+.|++-|.||++|.|+.+....+.. ..|+++||++|.||.++.|..+.+||
T Consensus 203 V~Igd~VeIGanT~Idrga~~dTvIg~~~kIdN~vqIaHnv~IG~~~~I~~~vgIaGs~~IG~~v~igg~vgI~gh~~Ig 282 (338)
T COG1044 203 VIIGDDVEIGANTTIDRGALDDTVIGEGVKIDNLVQIGHNVRIGEHCIIAGQVGIAGSVKIGKYVIIGGQVGIAGHLEIG 282 (338)
T ss_pred EEECCceEEcccceeccccccCceecCCcEEcceeEEccccEECCCcEEeccceeeccceECCeEEECcceeecCceEEc
Confidence 789999999998877643 233333334556666665555544443 77889999999999999999999999
Q ss_pred CCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1645 RDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
|++.|++++.|+++ |+++..|.|.|+
T Consensus 283 D~~~I~~~~~v~~~--i~~~~~~gg~P~ 308 (338)
T COG1044 283 DGVTIGARSGVMAS--ITEPGYSGGIPA 308 (338)
T ss_pred CCCEEecccccccc--cCCCceeccCCC
Confidence 99999999999999 999999999995
No 155
>PRK05289 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=99.73 E-value=4.9e-17 Score=193.78 Aligned_cols=86 Identities=20% Similarity=0.273 Sum_probs=66.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|+.++ ...+.+.||+++.|+.++.+ .++++|||+|+||.++.|.++++||++++||++|
T Consensus 106 t~IG~~~~I~~~~--~I~h~~~IG~~v~i~~~~~i-----------~g~v~Igd~~~Ig~~~~i~~~v~Ig~~~~Ig~gs 172 (262)
T PRK05289 106 TRIGDNNLLMAYV--HVAHDCVVGNHVILANNATL-----------AGHVEVGDYAIIGGLTAVHQFVRIGAHAMVGGMS 172 (262)
T ss_pred eEECCceEECCCC--EECCeEEECCCeEECCcccc-----------ccccccCCcEEEeecceecCCCEECCCCEEeeec
Confidence 4566666666552 22334445555555444444 3788999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
+|++| +|+++++.|+|+..
T Consensus 173 ~V~~d--i~~~~~~~G~pa~~ 191 (262)
T PRK05289 173 GVSQD--VPPYVLAEGNPARL 191 (262)
T ss_pred ceecc--CCCCeEEecccCeE
Confidence 99999 99999999999744
No 156
>KOG0685 consensus Flavin-containing amine oxidase [Coenzyme transport and metabolism]
Probab=99.73 E-value=4.4e-17 Score=194.94 Aligned_cols=329 Identities=20% Similarity=0.220 Sum_probs=173.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEec------CC--CCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALID------GS--TGEF 91 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~------~~--~~~~ 91 (2280)
.+.+|+|||||+|||+||.+|-+.|..+|+|+|++||+|||++|+.+...-++++..+.++..-+. .. ...+
T Consensus 20 ~~~kIvIIGAG~AGLaAA~rLle~gf~~~~IlEa~dRIGGRI~ti~~~d~~ielGAqwihG~~gNpVY~la~~~g~~~~~ 99 (498)
T KOG0685|consen 20 GNAKIVIIGAGIAGLAAATRLLENGFIDVLILEASDRIGGRIHTIPFADGVIELGAQWIHGEEGNPVYELAKEYGDLKLL 99 (498)
T ss_pred CCceEEEECCchHHHHHHHHHHHhCCceEEEEEeccccCceEeeEEcCCCeEeecceeecCCCCChHHHHHHHhCcccee
Confidence 346899999999999999999988887899999999999999999988776777666555511000 00 0000
Q ss_pred eeccccc-chhhhhc----cccccchhhhhc-------ccc-----chhhHHHhhhhhhhHHHHHcCCCCcchhhh---h
Q 037878 92 QDIKVAD-DYVSVIS----LTLELQDKAKES-------GRI-----GVHAVSDLASDLTPTYLEDRGFKSVPKSVA---Y 151 (2280)
Q Consensus 92 ~~~~~~~-~~~~~~~----~~~~~~~~~~~~-------~~~-----~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~---~ 151 (2280)
...+... +...... +.........+. .+. .......+......+.+............. +
T Consensus 100 ~~tg~~~~~~~~~~~~g~~V~~~~~~~~~~~~~~~~~~~r~~~~~~~~~SvG~~ln~~~~~~~~~~e~~~~~k~l~~~~~ 179 (498)
T KOG0685|consen 100 EVTGPAYVDNFHTRSNGEVVPEELLDELNEITVTLSDKLREAEIAHDEGSVGEYLNSEFWDELRGPENPEIDKTLAEEIL 179 (498)
T ss_pred ccCCccccceeEEEecCccCcHHHHHHHHHHHHhhhhhcccccccCccccHHHHHHHHHHHHhccccccchhhHHHHHHH
Confidence 0000000 0000000 000000000000 000 000111111111111111000000011111 1
Q ss_pred hhhccc---ccccccccHHHHHHHHhhccC-C--eEEEEcCCHHHHHHHHHhHCC---------CceEeCcceEEEEEcC
Q 037878 152 GYTASG---YGFVQDMPYAYIHEFTRTSMA-G--KIRRFKGGYTSLWQKLSKYLP---------TEVHCNSEVLAIRRDS 216 (2280)
Q Consensus 152 ~~~~~~---~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~gG~~~l~~~la~~lg---------~~I~l~t~V~~I~~~~ 216 (2280)
..+... ....+.+....+..+...... + .....+.|+..+.+-|++.+. .+++++++|.+|+.++
T Consensus 180 ~~~~k~e~~~~~~d~l~evs~~~~~ey~~~~ge~~~~~~~kGy~~iL~~l~~~~p~~~i~~~~~~~~~~~~rv~~I~~~~ 259 (498)
T KOG0685|consen 180 NVYFKVECSITGADNLSEVSLRALLEYTECPGEELLIWNKKGYKRILKLLMAVIPAQNIELGLWKRIHLNTRVENINWKN 259 (498)
T ss_pred HHHHHHheeeeccCchhhhhhhhccceeecCchhhheechhHHHHHHHHHhccCCCcchhcCchhhhcccccceeeccCC
Confidence 111100 011122222333332222221 2 344567799999999987652 2455669999999875
Q ss_pred CccEEEEEeCCCceEEEEeCEEEEcCCcccccc---cccCCCCChhhHhhhccCCCChhhHhhhccceeeeeEE-----E
Q 037878 217 TTVGVDVKHSNGECEVMEFDKIIISGAFPVKNG---KFYRSPTSKPTESETQVMDMDELEKELFSKVQTIDYYT-----T 288 (2280)
Q Consensus 217 ~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~---i~f~p~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~-----~ 288 (2280)
.+ .|.+++.|| +.+.||+||+|+|++|++. .-|.|++|..++.++..+..+...|- |-.+....+.. .
T Consensus 260 ~~-~v~l~c~dg--~v~~adhVIvTvsLGvLk~~h~~lF~P~LP~~K~~AIe~lgfGtv~Ki-FLE~E~pfwp~~~~~i~ 335 (498)
T KOG0685|consen 260 TG-EVKLRCSDG--EVFHADHVIVTVSLGVLKEQHHKLFVPPLPAEKQRAIERLGFGTVNKI-FLEFEEPFWPSDWNGIQ 335 (498)
T ss_pred CC-cEEEEEeCC--cEEeccEEEEEeechhhhhhhhhhcCCCCCHHHHHHHHhccCCccceE-EEEccCCCCCCCCceeE
Confidence 33 478899999 5899999999999999776 34999999999999999999988774 33333222211 1
Q ss_pred EEee-cCcccCCceeEEEecCCCCCCCCCCcceeEEeecCCCcEEEEecCCC----CCCChHHHHHHHHHHHHhhcCc
Q 037878 289 VLKI-TGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFFADTDIFLFWSYGNS----VDITGPTVTEVAIKTVENMGGV 361 (2280)
Q Consensus 289 i~~~-~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~----~~~s~~e~~~~i~~~L~~~~~~ 361 (2280)
.+.. ..+.++-... . ...-....+......+++..-|..|.. ..++|+|+.+.+..-|+++.+.
T Consensus 336 ~lw~~e~l~e~r~~~----~-----~w~~~~~~f~~v~~~~~vL~gWiaG~~~~~me~lsdEev~e~~~~~lr~fl~n 404 (498)
T KOG0685|consen 336 LLWLDEDLEELRSTL----D-----AWEEDIMGFQPVSWAPNVLLGWIAGREARHMETLSDEEVLEGLTKLLRKFLKN 404 (498)
T ss_pred EEEecCcHHHHhhhh----H-----HHHhhceEEEEcCcchhhhheeccCCcceehhhCCHHHHHHHHHHHHHHhcCC
Confidence 1111 1111100000 0 000011122222223334444444433 5689999999999999998643
No 157
>PLN02529 lysine-specific histone demethylase 1
Probab=99.71 E-value=6.1e-16 Score=204.87 Aligned_cols=91 Identities=15% Similarity=0.184 Sum_probs=77.3
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCccccc--ccccCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKN--GKFYRSP 255 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~--~i~f~p~ 255 (2280)
.+..+.+.||+++|+++|++.+ +|++|++|++|+.++++| .|.+ ++ ++++||+||+|+|+++++ .+.|.|+
T Consensus 346 ~G~~~~i~GG~~~Li~aLA~~L--~IrLnt~V~~I~~~~dGV--tV~t-~~--~~~~AD~VIVTVPlgVLk~~~I~F~Pp 418 (738)
T PLN02529 346 GGDHCFLAGGNWRLINALCEGV--PIFYGKTVDTIKYGNDGV--EVIA-GS--QVFQADMVLCTVPLGVLKKRTIRFEPE 418 (738)
T ss_pred CCceEEECCcHHHHHHHHHhcC--CEEcCCceeEEEEcCCeE--EEEE-CC--EEEEcCEEEECCCHHHHHhccccCCCC
Confidence 4567789999999999999977 599999999999988876 4554 34 478999999999999987 6899999
Q ss_pred CChhhHhhhccCCCChhhHh
Q 037878 256 TSKPTESETQVMDMDELEKE 275 (2280)
Q Consensus 256 ~~~~~~~~l~~~~l~~~~k~ 275 (2280)
+|+.+...+..+.++...|.
T Consensus 419 LP~~K~~AI~rL~yG~v~KV 438 (738)
T PLN02529 419 LPRRKLAAIDRLGFGLLNKV 438 (738)
T ss_pred CCHHHHHHHHcCCCceeEEE
Confidence 99999999888887766654
No 158
>COG0663 PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]
Probab=99.70 E-value=1.9e-16 Score=167.77 Aligned_cols=118 Identities=22% Similarity=0.302 Sum_probs=102.5
Q ss_pred eeCCCceeccCCcccC--CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccC
Q 037878 1575 KIGRYCSIRAINPVSC--PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGAL 1652 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~--~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~ 1652 (2280)
+||++++|++++.++. ...++|||+|+|||+++| ..|+||++||||++++|+.|++||++|+||++
T Consensus 52 ~IG~~tNIQDg~ViH~~~~~p~~IG~~vtIGH~aiv------------HGc~Ig~~~lIGmgA~vldga~IG~~~iVgAg 119 (176)
T COG0663 52 RIGARTNIQDGVVIHADPGYPVTIGDDVTIGHGAVV------------HGCTIGDNVLIGMGATVLDGAVIGDGSIVGAG 119 (176)
T ss_pred EECCCceecCCeEEecCCCCCeEECCCcEEcCccEE------------EEeEECCCcEEecCceEeCCcEECCCcEEccC
Confidence 6888888888766543 468999999999999999 56999999999999999999999999999999
Q ss_pred ccccCCCccCCCcEEecCCCceeeecccchhhHHHHHhHHHHHHHHHhhhhhh
Q 037878 1653 SVAPMHSVLQRGGIYIGSQSPVMIKNTMHALDDRIEEMDMKYKKIVGNLSANL 1705 (2280)
Q Consensus 1653 s~v~~~~~v~~~~~~~G~Pa~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~~ 1705 (2280)
|+|+.++++|++++++|+| .+..|...++....++....+|.++.+++....
T Consensus 120 alV~~~k~~p~~~L~~G~P-ak~~r~l~~~~~~~~~~~a~~Yv~~~~~~~~~~ 171 (176)
T COG0663 120 ALVTPGKEIPGGSLVVGSP-AKVVRPLDDEELAWLRENAENYVKLADRYLAGL 171 (176)
T ss_pred CcccCCcCCCCCeEeecCc-ceeeecCChhHhhhhhHhHHHHHHHHHHHhhhh
Confidence 9999999999999999999 666677776667777777888888888776544
No 159
>PRK07208 hypothetical protein; Provisional
Probab=99.70 E-value=1.6e-15 Score=200.84 Aligned_cols=210 Identities=17% Similarity=0.223 Sum_probs=116.0
Q ss_pred eEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEE--eCCCceEEEEeCEEEEcCCcccccccccCC
Q 037878 180 KIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVK--HSNGECEVMEFDKIIISGAFPVKNGKFYRS 254 (2280)
Q Consensus 180 ~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~--t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p 254 (2280)
.+..++||++.|+++|++.+ |++|++|++|++|..+++++.+.+. ..+|+.+.++||+||+|+|+.....+ +.|
T Consensus 209 ~~~~p~gG~~~l~~~L~~~l~~~g~~i~~~~~V~~I~~~~~~~v~~~~~~~~~g~~~~~~ad~VI~a~p~~~l~~~-l~~ 287 (479)
T PRK07208 209 EFRYPKLGPGQLWETAAEKLEALGGKVVLNAKVVGLHHDGDGRIAVVVVNDTDGTEETVTADQVISSMPLRELVAA-LDP 287 (479)
T ss_pred EEeCCCCCcchHHHHHHHHHHHcCCEEEeCCEEEEEEEcCCcEEEEEEEEcCCCCEEEEEcCEEEECCCHHHHHHh-cCC
Confidence 45567999999999998766 7899999999999998776433333 23464346899999999776532211 112
Q ss_pred CCChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEEecCCCCCCCCCCcceeEEeecCCC--cEE
Q 037878 255 PTSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFFADTD--IFL 332 (2280)
Q Consensus 255 ~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~ 332 (2280)
+.+ ...+..+..+.+.......+..+.-+..+..+.|+..........-..........+.+ ...
T Consensus 288 ~~~-------------~~~~~~~~~l~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~~~p~g~~~~l 354 (479)
T PRK07208 288 PPP-------------PEVRAAAAGLRYRDFITVGLLVKELNLFPDNWIYIHDPDVKVGRLQNFNNWSPYLVPDGRDTWL 354 (479)
T ss_pred CCC-------------HHHHHHHhCCCcceeEEEEEEecCCCCCCCceEEecCCCCccceecccccCCcccCCCCCceEE
Confidence 221 12222233344433322222222211123333332211100000000000000001111 111
Q ss_pred --EEe-c--CCCCCCChHHHHHHHHHHHHhhcCc----cceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCceec
Q 037878 333 --FWS-Y--GNSVDITGPTVTEVAIKTVENMGGV----IENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTYYV 403 (2280)
Q Consensus 333 --~~~-~--g~~~~~s~~e~~~~i~~~L~~~~~~----p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~ 403 (2280)
.+. + ....+++|+++.+.++++|++++.. +....+.++....|+|+....+. .+++...++..++.+++
T Consensus 355 ~~~~~~~~~~~~~~~~deel~~~~~~~L~~l~~~~~~~~~~~~v~r~~~a~P~y~~~~~~~--~~~~~~~~~~~~~l~la 432 (479)
T PRK07208 355 GLEYFCFEGDDLWNMSDEDLIALAIQELARLGLIRPADVEDGFVVRVPKAYPVYDGTYERN--VEIIRDLLDHFPNLHLV 432 (479)
T ss_pred EEEEEccCCCccccCCHHHHHHHHHHHHHHcCCCChhheeEEEEEEecCcccCCCchHHHH--HHHHHHHHHhcCCceee
Confidence 111 1 1124678999999999999998521 56677888999999998877653 34442234566899999
Q ss_pred cc
Q 037878 404 GG 405 (2280)
Q Consensus 404 G~ 405 (2280)
|-
T Consensus 433 Gr 434 (479)
T PRK07208 433 GR 434 (479)
T ss_pred cc
Confidence 93
No 160
>PLN02268 probable polyamine oxidase
Probab=99.69 E-value=2.7e-16 Score=205.38 Aligned_cols=201 Identities=14% Similarity=0.151 Sum_probs=119.7
Q ss_pred EEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCccccc--ccccCCCCChh
Q 037878 182 RRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKN--GKFYRSPTSKP 259 (2280)
Q Consensus 182 ~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~--~i~f~p~~~~~ 259 (2280)
..+.+|++.+++++++.+ +|++|++|++|+++++++ .|++.+| +++.||+||+|+|+++.+ .+.|.|+.|+.
T Consensus 194 ~~~~~G~~~l~~~l~~~~--~i~~~~~V~~i~~~~~~v--~v~~~~g--~~~~ad~VIva~P~~~l~~~~i~f~p~lp~~ 267 (435)
T PLN02268 194 GLMVRGYDPVINTLAKGL--DIRLNHRVTKIVRRYNGV--KVTVEDG--TTFVADAAIIAVPLGVLKANIIKFEPELPEW 267 (435)
T ss_pred eeecCCHHHHHHHHhccC--ceeCCCeeEEEEEcCCcE--EEEECCC--cEEEcCEEEEecCHHHHhcCcceecCCCCHH
Confidence 457889999999998855 799999999999988865 5666777 478999999999999876 47899999998
Q ss_pred hHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEEecCCCCCCCCCCcceeEEee--cCCCcEEEEecC
Q 037878 260 TESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFF--ADTDIFLFWSYG 337 (2280)
Q Consensus 260 ~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~g 337 (2280)
+...+....++...|. +-.|+...+ +. +..+++..+.. .+..+ ..... ........+..+
T Consensus 268 ~~~ai~~~~~g~~~Kv-~l~f~~~fw----------~~-~~~~g~~~~~~-----~~~~~-~~~~~~~~g~~~l~~~~~g 329 (435)
T PLN02268 268 KEEAISDLGVGIENKI-ALHFDSVFW----------PN-VEFLGVVAPTS-----YGCSY-FLNLHKATGHPVLVYMPAG 329 (435)
T ss_pred HHHHHHhCCccceeEE-EEEeCCCCC----------CC-CceeeccCCCC-----CCceE-EEecccCCCCCEEEEEecc
Confidence 8888877666655442 222221111 00 01111111100 00000 00000 111222222222
Q ss_pred CC----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCC--C----CcccchhhhcchhhHHHHHHhcCcCCceecc
Q 037878 338 NS----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFK--Y----FPHVNSKDMKDGFYDRLEYELQGQRNTYYVG 404 (2280)
Q Consensus 338 ~~----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~--~----~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~G 404 (2280)
.. .+++++++++.+++.|+++.+ .|......+|.. | +..+.+.... .+++.+ .++..+++|+|
T Consensus 330 ~~a~~~~~~~~~e~~~~v~~~L~~~~~~~~~p~~~~~~~W~~dp~~~G~~~~~~~g~~~-~~~~~l---~~p~~~l~FAG 405 (435)
T PLN02268 330 RLARDIEKLSDEAAANFAMSQLKKMLPDATEPVQYLVSRWGSDPNSLGCYSYDLVGKPH-DLYERL---RAPVDNLFFAG 405 (435)
T ss_pred HHHHHHHhCCHHHHHHHHHHHHHHHcCCCCCccEEEecccCCCCCCCccCCCCCCCCCH-HHHHHH---hCCCCCeEEee
Confidence 21 457899999999999999853 255666666641 1 1112222221 123333 24556799999
Q ss_pred cccccc
Q 037878 405 GLMAFE 410 (2280)
Q Consensus 405 ~~~~~~ 410 (2280)
..++.+
T Consensus 406 e~ts~~ 411 (435)
T PLN02268 406 EATSSD 411 (435)
T ss_pred ccCCCc
Confidence 776553
No 161
>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate).
Probab=99.69 E-value=2.5e-16 Score=192.32 Aligned_cols=97 Identities=21% Similarity=0.194 Sum_probs=67.4
Q ss_pred CeeCCCceeccCCcccC--------CcceEECCCcEeCCCcEEeecccCCCc-eEeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1574 AKIGRYCSIRAINPVSC--------PQQVTLGAGVHLGDFSRIIPGFYSSIG-FIFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~--------~~~~~iG~~~~i~~~~~i~~~~~~~~~-~~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
+.||++|+|+.++.+.. .+.+.|++.|+|+++|.|+.+....+. ...+.++||++|+||+++.|.++++||
T Consensus 196 vvIgd~v~IGa~~~I~r~~~~~t~Ig~~~~I~n~v~I~~~v~IG~~~~I~~~~~iag~~~IG~~~~ig~~~~I~~~v~Ig 275 (324)
T TIGR01853 196 VIIEDDVEIGANTTIDRGAFDDTIIGEGTKIDNLVQIAHNCRIGENCIIVAQVGIAGSTKIGRNVIIGGQVGVAGHLEIG 275 (324)
T ss_pred EEECCCcEECCCCEEecCCcCcceecCCcEEccCcEECCCCEECCCcEECCcceEcCccEECCCeEEccccccccCCEEC
Confidence 45666666655543321 122223333333333333333332222 245789999999999999999999999
Q ss_pred CCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1645 RDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
++++||++|.|++| +|++++|.|+||
T Consensus 276 ~~~~ig~~s~V~~~--v~~~~~~~G~pa 301 (324)
T TIGR01853 276 DNVTIGAKSGVTKS--IPPPGVYGGIPA 301 (324)
T ss_pred CCCEEccCCEeCCc--CCCCcEEEccCc
Confidence 99999999999999 999999999995
No 162
>PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional
Probab=99.69 E-value=3.3e-16 Score=195.11 Aligned_cols=53 Identities=19% Similarity=0.240 Sum_probs=49.7
Q ss_pred EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCC-CcEEecCCCc
Q 037878 1619 IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQR-GGIYIGSQSP 1673 (2280)
Q Consensus 1619 ~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~-~~~~~G~Pa~ 1673 (2280)
..+.++||++|+||.++.|.++++||++++||++|.|+++ +|+ |..|.|+||.
T Consensus 258 i~~~~~iG~~~~ig~~~~i~~~~~ig~~~~i~~~s~v~~~--i~~~~~~~~G~pa~ 311 (343)
T PRK00892 258 IAGSTKIGRYCMIGGQVGIAGHLEIGDGVTITAMSGVTKS--IPEPGEYSSGIPAQ 311 (343)
T ss_pred ecCCCEECCceEECCCCEEcCCCEECCCCEEecCCeeCCc--cCCCCeEEEeecCc
Confidence 4578999999999999999999999999999999999999 999 8999999963
No 163
>PLN03000 amine oxidase
Probab=99.68 E-value=2.4e-15 Score=198.63 Aligned_cols=210 Identities=16% Similarity=0.118 Sum_probs=126.8
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCccccc--ccccCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKN--GKFYRSP 255 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~--~i~f~p~ 255 (2280)
.+..+.+.||++.|+++|++.+ +|++|++|++|+++++++ .|++.++ +++||+||+|+|+++++ .|+|.|+
T Consensus 370 ~G~~~~v~GG~~~LieaLa~~L--~I~Ln~~Vt~I~~~~dgV--~V~~~~~---~~~AD~VIvTVPlgVLk~~~I~F~Pp 442 (881)
T PLN03000 370 GGDHCFLPGGNGRLVQALAENV--PILYEKTVQTIRYGSNGV--KVIAGNQ---VYEGDMVLCTVPLGVLKNGSIKFVPE 442 (881)
T ss_pred CCceEEeCCCHHHHHHHHHhhC--CcccCCcEEEEEECCCeE--EEEECCc---EEEeceEEEcCCHHHHhhCceeeCCC
Confidence 4557789999999999999998 499999999999988876 4555433 78999999999999988 7999999
Q ss_pred CChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEEecCCCCCCCCCCcceeEEeec--CCCcEEE
Q 037878 256 TSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFFA--DTDIFLF 333 (2280)
Q Consensus 256 ~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~ 333 (2280)
+|..+...+..+.++...|.++ .|....+ .. ....+++........ +....+..+.. ...+...
T Consensus 443 LP~~K~~AI~rL~~G~l~KViL-~Fd~~FW------~~----d~~~FG~l~~~~~~r---g~~~~f~s~sp~~G~pVLva 508 (881)
T PLN03000 443 LPQRKLDCIKRLGFGLLNKVAM-LFPYVFW------ST----DLDTFGHLTEDPNYR---GEFFLFYSYAPVAGGPLLIA 508 (881)
T ss_pred CCHHHHHHHHcCCCcceEEEEE-EeCCccc------cC----CCCceeEEecCCCCC---ceeEEEeCCCCCCCCcEEEE
Confidence 9999999999888887766433 2222111 00 011233322111100 00000000111 1112222
Q ss_pred EecCCC----CCCChHHHHHHHHHHHHhhcC-------ccceEEEeecC--CCC----cccchhhhcchhhHHHHHHhcC
Q 037878 334 WSYGNS----VDITGPTVTEVAIKTVENMGG-------VIENVVLQRRF--KYF----PHVNSKDMKDGFYDRLEYELQG 396 (2280)
Q Consensus 334 ~~~g~~----~~~s~~e~~~~i~~~L~~~~~-------~p~~~~~~~~~--~~~----p~~s~~~~~~g~~~~l~~~lqg 396 (2280)
+..|.. ..++++++++.+++.|+++-+ .|....+.+|. +|. ..+.+.... ..++.+ .+--+
T Consensus 509 fv~Gd~A~~le~lSdeE~ve~vl~~Lrkifg~~~~~vp~Pv~~ivtrW~~DPysrGSYS~~~pG~~~-~~~d~L-aePv~ 586 (881)
T PLN03000 509 LVAGEAAHKFETMPPTDAVTRVLHILRGIYEPQGINVPDPLQTVCTRWGGDPFSLGSYSNVAVGASG-DDYDIL-AESVG 586 (881)
T ss_pred EecCchhHHhhcCCHHHHHHHHHHHHHHHhCccccccCCceEEEEccCCCCCCCCccccCCCCCCch-HHHHHH-hCcCC
Confidence 222332 458999999999999999743 25555555554 111 112222221 123333 11112
Q ss_pred cCCceecccccccc
Q 037878 397 QRNTYYVGGLMAFE 410 (2280)
Q Consensus 397 ~~~~~~~G~~~~~~ 410 (2280)
...+||+|..++.+
T Consensus 587 ~GRIfFAGEaTs~~ 600 (881)
T PLN03000 587 DGRLFFAGEATTRR 600 (881)
T ss_pred CCcEEEeehHHhCC
Confidence 45799999765543
No 164
>KOG0029 consensus Amine oxidase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.68 E-value=4.7e-16 Score=199.00 Aligned_cols=90 Identities=19% Similarity=0.325 Sum_probs=75.2
Q ss_pred EEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCcc-EEEEEeCCCceEEEEeCEEEEcCCcccccc--cccCCCCC
Q 037878 181 IRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTV-GVDVKHSNGECEVMEFDKIIISGAFPVKNG--KFYRSPTS 257 (2280)
Q Consensus 181 ~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v-~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~--i~f~p~~~ 257 (2280)
...+.+|+..++..+++ |.+|++++.|.+|++.+++. .+++.+.++ +++|+||+|+|+++++. |.|.|+.+
T Consensus 211 ~~~~~~G~~~v~~~la~--~l~I~~~~~v~~i~~~~~~~~~~~~~~~~~----~~~d~vvvt~pl~vLk~~~i~F~P~Lp 284 (501)
T KOG0029|consen 211 HLLMKGGYEPVVNSLAE--GLDIHLNKRVRKIKYGDDGAVKVTVETGDG----YEADAVVVTVPLGVLKSGLIEFSPPLP 284 (501)
T ss_pred hhHhhCCccHHHhhcCC--CcceeeceeeEEEEEecCCceEEEEECCCe----eEeeEEEEEccHHHhccCceeeCCCCc
Confidence 35688999999999998 55899999999999877763 344444333 79999999999999877 99999999
Q ss_pred hhhHhhhccCCCChhhHhh
Q 037878 258 KPTESETQVMDMDELEKEL 276 (2280)
Q Consensus 258 ~~~~~~l~~~~l~~~~k~~ 276 (2280)
.++..+++..+.+...|-+
T Consensus 285 ~~k~~aI~~lg~g~~~Kv~ 303 (501)
T KOG0029|consen 285 RWKQEAIDRLGFGLVNKVI 303 (501)
T ss_pred HHHHHHHHhcCCCceeEEE
Confidence 9999999998888776644
No 165
>PLN02328 lysine-specific histone demethylase 1 homolog
Probab=99.67 E-value=3.1e-15 Score=198.64 Aligned_cols=92 Identities=20% Similarity=0.224 Sum_probs=78.1
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCccccc--ccccCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKN--GKFYRSP 255 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~--~i~f~p~ 255 (2280)
.+..+.+.||++.|+++|++.++ |++|++|++|.+.+++| .+ +.+| ++++||+||+|+|+++++ .|.|.|+
T Consensus 426 ~G~~~~v~GG~~~Li~aLa~~L~--I~ln~~V~~I~~~~dgV--~V-~~~G--~~~~AD~VIvTvPl~vLk~~~I~F~P~ 498 (808)
T PLN02328 426 GGDHCFIPGGNDTFVRELAKDLP--IFYERTVESIRYGVDGV--IV-YAGG--QEFHGDMVLCTVPLGVLKKGSIEFYPE 498 (808)
T ss_pred CCeEEEECCcHHHHHHHHHhhCC--cccCCeeEEEEEcCCeE--EE-EeCC--eEEEcCEEEECCCHHHHhhcccccCCC
Confidence 35577899999999999999984 99999999999988876 34 3356 578999999999999987 6899999
Q ss_pred CChhhHhhhccCCCChhhHhh
Q 037878 256 TSKPTESETQVMDMDELEKEL 276 (2280)
Q Consensus 256 ~~~~~~~~l~~~~l~~~~k~~ 276 (2280)
+|+.+...+..+.++...|..
T Consensus 499 LP~~K~~AI~~l~yG~~~KV~ 519 (808)
T PLN02328 499 LPQRKKDAIQRLGYGLLNKVA 519 (808)
T ss_pred CCHHHHHHHHcCCCcceEEEE
Confidence 999999999888887766643
No 166
>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase. This model describes LpxA, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat (pfam00132).
Probab=99.67 E-value=1.3e-15 Score=181.77 Aligned_cols=85 Identities=24% Similarity=0.366 Sum_probs=71.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|+..+.+ .+.++||++|.|+.++.+. +.++||++|+||+++.+.++++||++++||++|
T Consensus 102 ~~IG~~~~I~~~~~I--~~~~~Ig~~~~i~~~~~i~-----------~~~~Igd~~~Ig~~~~i~~~v~Ig~~~~Ig~~s 168 (254)
T TIGR01852 102 TRIGNNNLLMAYSHI--AHDCVVGNHVILANNATLA-----------GHVEVGDYAIIGGLVAVHQFVRIGRYAMIGGLS 168 (254)
T ss_pred EEECCCCEECCCCEE--ccCCEECCCCEECCCCEEC-----------CCcEECCCcEEeccCEECCCcEECCCCEEeeee
Confidence 578888888766322 3556777777777776664 778999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCc
Q 037878 1654 VAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
+|+++ +|+++++.|+|+.
T Consensus 169 ~V~~~--i~~~~~~~G~pa~ 186 (254)
T TIGR01852 169 AVSKD--VPPYGLVEGNRAR 186 (254)
T ss_pred eEeee--cCCCcEEecCcCe
Confidence 99999 9999999999964
No 167
>KOG1276 consensus Protoporphyrinogen oxidase [Coenzyme transport and metabolism]
Probab=99.67 E-value=3.3e-15 Score=175.44 Aligned_cols=211 Identities=10% Similarity=0.049 Sum_probs=139.7
Q ss_pred CeEEEEcCCHHHHHHHHHhHCC---CceEeCcceEEEEEc-CCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCC
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLP---TEVHCNSEVLAIRRD-STTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRS 254 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg---~~I~l~t~V~~I~~~-~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p 254 (2280)
...+.++||++.+.+++.+.|+ +.|.++-++..+... .++|.+++++.++. .....+++..|.
T Consensus 239 ~~~~sl~gGle~lP~a~~~~L~~~~v~i~~~~~~~~~sk~~~~~~~~tl~~~~~~-~~~~~~~~~~t~------------ 305 (491)
T KOG1276|consen 239 WTMFSLKGGLETLPKALRKSLGEREVSISLGLKLSGNSKSRSGNWSLTLVDHSGT-QRVVVSYDAATL------------ 305 (491)
T ss_pred cchhhhhhhHhHhHHHHHHHhcccchhhhcccccccccccccCCceeEeEcCCCc-eeeecccccccc------------
Confidence 4456789999999999999985 457888888888654 45688899888884 345666666663
Q ss_pred CCChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC--cccCCceeEEEec--CCCCCCCCCCcceeEEee--cCC
Q 037878 255 PTSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG--LEHLPVGFYYFGE--YMDDPATIGHPVAMQKFF--ADT 328 (2280)
Q Consensus 255 ~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~--l~~~p~~~~~~~~--~~~~~~~~~~~~~~~~~~--~~~ 328 (2280)
++.+...+.+- ..+...+.+..+.|.+.+.+....++ ....-.+|+++.| ..++...+|..+...-|. .++
T Consensus 306 --~~~k~a~ll~~-~~~sls~~L~ei~y~~V~vVn~~yp~~~~~~pl~GFG~LvPs~~~~~~~~LG~ifdS~~Fp~~~~s 382 (491)
T KOG1276|consen 306 --PAVKLAKLLRG-LQNSLSNALSEIPYVPVAVVNTYYPKEKIDLPLQGFGLLVPSEPKNGFKTLGTIFDSMLFPDRSPS 382 (491)
T ss_pred --chHHhhhhccc-cchhhhhhhhcCCCCceEEEEEeccCcccccccccceeeccCCCCCCCceeEEEeecccCCCCCCC
Confidence 34444444322 22233456677777777777766554 2222379999999 555666777666544444 233
Q ss_pred CcEEEEecCCC------CCCChHHHHHHHHHHHHhhcCc---cceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcC-
Q 037878 329 DIFLFWSYGNS------VDITGPTVTEVAIKTVENMGGV---IENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQR- 398 (2280)
Q Consensus 329 ~~~~~~~~g~~------~~~s~~e~~~~i~~~L~~~~~~---p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~- 398 (2280)
+..++..+|.- ...+.||+++.+.++|++|.+. |......-|...+|+|+..+.+. .+.....++..+
T Consensus 383 ~~vtvm~gg~~~~n~~~~~~S~ee~~~~v~~alq~~Lgi~~~P~~~~v~l~~~ciPqy~vGh~~~--le~a~~~l~~~~g 460 (491)
T KOG1276|consen 383 PKVTVMMGGGGSTNTSLAVPSPEELVNAVTSALQKMLGISNKPVSVNVHLWKNCIPQYTVGHDDV--LEAAKSMLTDSPG 460 (491)
T ss_pred ceEEEEecccccccCcCCCCCHHHHHHHHHHHHHHHhCCCCCcccccceehhhcccceecchHHH--HHHHHHHHHhCCC
Confidence 34444444322 3368899999999999998544 66666666677889887776652 444444455555
Q ss_pred -Cceeccccc
Q 037878 399 -NTYYVGGLM 407 (2280)
Q Consensus 399 -~~~~~G~~~ 407 (2280)
..+++|+++
T Consensus 461 ~~l~l~G~~y 470 (491)
T KOG1276|consen 461 LGLFLGGNHY 470 (491)
T ss_pred CceEeecccc
Confidence 788888874
No 168
>cd03351 LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc. It is the first enzyme in the lipid A biosynthetic pathway and is also referred to as LpxA. Lipid A is essential for the growth of Escherichia coli and related bacteria. It is also essential for maintaining the integrity of the outer membrane. UDP-GlcNAc acyltransferase is a homotrimer of left-handed parallel beta helix (LbH) subunits. Each subunit contains an N-terminal LbH region with 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal alpha-helical region.
Probab=99.67 E-value=1.2e-15 Score=182.07 Aligned_cols=84 Identities=24% Similarity=0.314 Sum_probs=69.3
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||++|.|+.++.+ .+.+.||++|.|+.++.+. +.++||++|+||+++.|.++++||++++||++|
T Consensus 103 ~~IG~~~~I~~~~~I--~~~~~IG~~~~i~~~~~i~-----------~~v~Igd~~~Ig~~~~i~~~v~Ig~~~~Ig~~s 169 (254)
T cd03351 103 TRIGNNNLLMAYVHV--AHDCVIGNNVILANNATLA-----------GHVEIGDYAIIGGLSAVHQFCRIGRHAMVGGGS 169 (254)
T ss_pred eEECCCCEECCCCEE--CCCCEECCCcEECCCcccc-----------CCcEeCCCcEECCcceECCCcEECCCCEECcCC
Confidence 578888888776322 2445666666666655553 678999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCC
Q 037878 1654 VAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa 1672 (2280)
+|.++ +++++++.|+|+
T Consensus 170 ~V~~~--i~~~~~~~G~~~ 186 (254)
T cd03351 170 GVVQD--VPPYVIAAGNRA 186 (254)
T ss_pred EEeee--cCCCeEEEccCC
Confidence 99999 999999999996
No 169
>PLN02676 polyamine oxidase
Probab=99.66 E-value=1.3e-15 Score=198.41 Aligned_cols=88 Identities=23% Similarity=0.252 Sum_probs=76.1
Q ss_pred cCCHHHHHHHHHhHC---------CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccc--cccC
Q 037878 185 KGGYTSLWQKLSKYL---------PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNG--KFYR 253 (2280)
Q Consensus 185 ~gG~~~l~~~la~~l---------g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~--i~f~ 253 (2280)
++|+++|+++|++.+ +.+|++|++|++|+.+++++ .|++.+| ++++||+||+|+|+++++. +.|.
T Consensus 220 ~~G~~~l~~~La~~~~~~~~~~~~~~~I~l~~~V~~I~~~~~gV--~V~~~~G--~~~~a~~VIvtvPl~vLk~~~I~F~ 295 (487)
T PLN02676 220 PRGYESLVYYLAEQFLSTKSGKITDPRLKLNKVVREISYSKNGV--TVKTEDG--SVYRAKYVIVSVSLGVLQSDLIKFK 295 (487)
T ss_pred CCCHHHHHHHHHhhcccccccccCCCceecCCEeeEEEEcCCcE--EEEECCC--CEEEeCEEEEccChHHhccCceEEe
Confidence 689999999999876 25799999999999988865 7778888 5799999999999999886 9999
Q ss_pred CCCChhhHhhhccCCCChhhHhh
Q 037878 254 SPTSKPTESETQVMDMDELEKEL 276 (2280)
Q Consensus 254 p~~~~~~~~~l~~~~l~~~~k~~ 276 (2280)
|++|+.+...+..+.++...|.+
T Consensus 296 P~LP~~k~~ai~~l~~g~~~Kv~ 318 (487)
T PLN02676 296 PPLPDWKIEAIYQFDMAVYTKIF 318 (487)
T ss_pred CCCCHHHHHHHHhCCceeeEEEE
Confidence 99999999888888887766643
No 170
>PLN02568 polyamine oxidase
Probab=99.65 E-value=2e-15 Score=197.48 Aligned_cols=93 Identities=18% Similarity=0.333 Sum_probs=79.9
Q ss_pred CeEEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccc------cc
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNG------KF 251 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~------i~ 251 (2280)
+..+.++||++.|+++|++.+. .+|++|++|++|+++++++ .|++.+| ++++||+||+|+|+++++. +.
T Consensus 232 g~~~~i~gG~~~Li~~La~~L~~~~I~ln~~V~~I~~~~~~v--~V~~~dG--~~~~aD~VIvTvPl~vL~~~~~~~~i~ 307 (539)
T PLN02568 232 GEEITIAKGYLSVIEALASVLPPGTIQLGRKVTRIEWQDEPV--KLHFADG--STMTADHVIVTVSLGVLKAGIGEDSGL 307 (539)
T ss_pred CCeEEECCcHHHHHHHHHhhCCCCEEEeCCeEEEEEEeCCeE--EEEEcCC--CEEEcCEEEEcCCHHHHhhccccccce
Confidence 4467899999999999999994 5799999999999988865 5666778 4689999999999999774 68
Q ss_pred cCCCCChhhHhhhccCCCChhhHh
Q 037878 252 YRSPTSKPTESETQVMDMDELEKE 275 (2280)
Q Consensus 252 f~p~~~~~~~~~l~~~~l~~~~k~ 275 (2280)
|.|++|..+...+..+.++...|-
T Consensus 308 F~P~LP~~k~~Ai~~l~~g~~~Ki 331 (539)
T PLN02568 308 FSPPLPDFKTDAISRLGFGVVNKL 331 (539)
T ss_pred ecCCCCHHHHHHHHhcCCceeeEE
Confidence 999999999999988888877664
No 171
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]
Probab=99.64 E-value=1.1e-15 Score=179.71 Aligned_cols=95 Identities=20% Similarity=0.255 Sum_probs=76.2
Q ss_pred CeeCCCceeccCCc---ccCCcceEECCCcEeCCCcEEeecccCC--CceEeeCeEECCCcEEccCCeeCCCcEeCCCcE
Q 037878 1574 AKIGRYCSIRAINP---VSCPQQVTLGAGVHLGDFSRIIPGFYSS--IGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVI 1648 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~---~~~~~~~~iG~~~~i~~~~~i~~~~~~~--~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~ 1648 (2280)
++||++||+-.... .-.+||++||| +.||.+|.|++..++. ++....++.||+++|||+++.+-..++||||+.
T Consensus 345 ~hIGNFVEvK~a~ig~gsKa~HLtYlGD-A~iG~~~NiGAGtItcNYDG~nK~~T~IGd~vFiGSns~LVAPV~IGd~a~ 423 (460)
T COG1207 345 VHIGNFVEVKKATIGKGSKAGHLTYLGD-AEIGENVNIGAGTITCNYDGKNKFKTIIGDNVFIGSNSQLVAPVTIGDGAT 423 (460)
T ss_pred CeEeeeEEEecccccCCccccceeeecc-ceecCCceeccceEEEcCCCcccceeeecCCcEEccCCcEEeeEEecCCcE
Confidence 56777666643221 12367788887 7777777777666543 344557889999999999999999999999999
Q ss_pred EccCccccCCCccCCCcEEecCC
Q 037878 1649 LGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1649 vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
||+||+|++| ||+++..++.+
T Consensus 424 iaAGStIT~D--Vp~~aLai~Ra 444 (460)
T COG1207 424 IAAGSTITKD--VPEGALAISRA 444 (460)
T ss_pred EcccceEccc--CCCCceeEeec
Confidence 9999999999 99999999998
No 172
>cd03352 LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc. This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).
Probab=99.63 E-value=6.3e-15 Score=171.22 Aligned_cols=51 Identities=24% Similarity=0.337 Sum_probs=49.2
Q ss_pred eCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1621 GKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
++++||++|+||.++++.++++||++++|+++|+|.++ +|++++|.|+||.
T Consensus 149 ~~~~Ig~~~~ig~~~~v~~~~~ig~~~~i~~~s~v~~~--~~~~~~~~G~pa~ 199 (205)
T cd03352 149 GSTTIGDNVIIGGQVGIAGHLTIGDGVVIGAGSGVTSI--VPPGEYVSGTPAQ 199 (205)
T ss_pred cccEECCCeEEcCCCEEeCCcEECCCCEEcCCCEEeeE--CCCCCEEEeecCc
Confidence 78999999999999999999999999999999999998 9999999999964
No 173
>COG1043 LpxA Acyl-[acyl carrier protein]
Probab=99.60 E-value=6.1e-15 Score=160.45 Aligned_cols=84 Identities=24% Similarity=0.332 Sum_probs=76.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
.+||+|+.+..+ .+.-|.|.||++|.++.+++|+ |++.|||++.||.-+-|.+-++||++|+||.+|
T Consensus 107 T~IGdnnl~May--~HVAHDC~iGn~~ilaNnatLA-----------GHV~igD~aiiGG~saVHQFvrIG~~amiGg~S 173 (260)
T COG1043 107 TRIGDNNLIMAY--AHVAHDCVIGNNCILANNATLA-----------GHVEVGDYAIIGGLSAVHQFVRIGAHAMIGGLS 173 (260)
T ss_pred EEECCCCEEEEe--eeeeccceecCcEEEecCCeEe-----------ccEEECCEEEEcCcceEEEEEEEcchheecccc
Confidence 479999999887 5567778888888888888886 888999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCC
Q 037878 1654 VAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa 1672 (2280)
.|.+| |||.++..|||+
T Consensus 174 ~v~~D--VpPy~~~~Gn~a 190 (260)
T COG1043 174 AVSQD--VPPYVIASGNHA 190 (260)
T ss_pred ccccC--CCCeEEecCCcc
Confidence 99999 999999999998
No 174
>PLN02976 amine oxidase
Probab=99.59 E-value=6.3e-14 Score=188.12 Aligned_cols=93 Identities=24% Similarity=0.308 Sum_probs=79.3
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEc----------CCccEEEEEeCCCceEEEEeCEEEEcCCcccc
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRD----------STTVGVDVKHSNGECEVMEFDKIIISGAFPVK 247 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~----------~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~ 247 (2280)
.+..+.+.||++.|+++|++.+ .|++|++|++|.++ +++ |.|.+.+| ++++||+||+|+|++++
T Consensus 925 gG~~~rIkGGYqqLIeALAe~L--~IrLNtpVtrId~s~~d~~~~~s~~dG--VtVtTsDG--etftADaVIVTVPLGVL 998 (1713)
T PLN02976 925 GGAHCMIKGGYSNVVESLAEGL--DIHLNHVVTDVSYGSKDAGASGSSRKK--VKVSTSNG--SEFLGDAVLITVPLGCL 998 (1713)
T ss_pred CCceEEeCCCHHHHHHHHHhhC--CeecCCeEEEEEecCCcccccccCCCc--EEEEECCC--CEEEeceEEEeCCHHHh
Confidence 3456779999999999999988 59999999999984 233 57778888 57999999999999997
Q ss_pred c--ccccCCCCChhhHhhhccCCCChhhHhh
Q 037878 248 N--GKFYRSPTSKPTESETQVMDMDELEKEL 276 (2280)
Q Consensus 248 ~--~i~f~p~~~~~~~~~l~~~~l~~~~k~~ 276 (2280)
+ .+.|.|++|..+...+..+.++...|.+
T Consensus 999 Kag~I~FsPPLPe~KqaAIqrLgfG~lnKV~ 1029 (1713)
T PLN02976 999 KAETIKFSPPLPDWKYSSIQRLGFGVLNKVV 1029 (1713)
T ss_pred hhcccccCCcccHHHHHHHHhhccccceEEE
Confidence 6 6899999999999999888888777643
No 175
>PRK07233 hypothetical protein; Provisional
Probab=99.57 E-value=1.7e-13 Score=179.79 Aligned_cols=351 Identities=17% Similarity=0.152 Sum_probs=168.6
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecCCCCceeecccc-----
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQDIKVA----- 97 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 97 (2280)
+|+|||||+|||+||++|+++|+ +|+|+|+++++||++++.+.+++-++.+...... -.......+.++++.
T Consensus 1 ~vvVIGaGiaGL~aA~~L~~~G~-~v~vlE~~~~~GG~~~s~~~~g~~~d~g~~~~~~--~~~~~~~l~~~lg~~~~~~~ 77 (434)
T PRK07233 1 KIAIVGGGIAGLAAAYRLAKRGH-EVTVFEADDQLGGLAASFEFGGLPIERFYHHIFK--SDEALLELLDELGLEDKLRW 77 (434)
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEEeCCCCCCceeeeccCCcchhhhhhhhcc--ccHHHHHHHHHcCCCCceee
Confidence 69999999999999999999998 6999999999999999988765443321110000 000000000000000
Q ss_pred -------------cch---hhhhccccccchhhhhcc----ccch-hhHHHhhhhhhhHHHHHcCCCCcchhhhhhhhcc
Q 037878 98 -------------DDY---VSVISLTLELQDKAKESG----RIGV-HAVSDLASDLTPTYLEDRGFKSVPKSVAYGYTAS 156 (2280)
Q Consensus 98 -------------~~~---~~~~~~~~~~~~~~~~~~----~~~~-~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~ 156 (2280)
..+ ...+.+............ .... .....+......+|+.+......-......+...
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~~~ 157 (434)
T PRK07233 78 RETKTGYYVDGKLYPLGTPLELLRFPHLSLIDKFRLGLLTLLARRIKDWRALDKVPAEEWLRRWSGEGVYEVFWEPLLES 157 (434)
T ss_pred ccCceEEEECCeEecCCCHHHHHcCCCCCHHHHHHhHHHHHhhhhcccccccccccHHHHHHHhcCHHHHHHHHHHHHhc
Confidence 000 000000000000000000 0000 0000111222345554432111111111111111
Q ss_pred -cccccccccHHHHHHHHhhcc-------CCeEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEEe
Q 037878 157 -GYGFVQDMPYAYIHEFTRTSM-------AGKIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKH 225 (2280)
Q Consensus 157 -~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t 225 (2280)
......+++...+...+.... ...++.++||++.++++|++.+ |++|++|++|++|+.+++++ .+..
T Consensus 158 ~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~v~~~~~V~~i~~~~~~~--~~~~ 235 (434)
T PRK07233 158 KFGDYADDVSAAWLWSRIKRRGNRRYSLFGEKLGYLEGGFATLIDALAEAIEARGGEIRLGTPVTSVVIDGGGV--TGVE 235 (434)
T ss_pred ccCCCccccCHHHHHHHHhhhhccccccCCceEeccCCCHHHHHHHHHHHHHhcCceEEeCCCeeEEEEcCCce--EEEE
Confidence 123345555555443332111 2346778999999999998766 78999999999999887765 2223
Q ss_pred CCCceEEEEeCEEEEcCCcccccccccCCCCChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEE
Q 037878 226 SNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYF 305 (2280)
Q Consensus 226 ~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~ 305 (2280)
.+| ++++||+||+|+|+.....+. |+.++ ..+..+.++.+...+...+....- ....+...
T Consensus 236 ~~~--~~~~ad~vI~a~p~~~~~~ll--~~~~~-------------~~~~~~~~~~~~~~~~~~l~~~~~--~~~~~~~~ 296 (434)
T PRK07233 236 VDG--EEEDFDAVISTAPPPILARLV--PDLPA-------------DVLARLRRIDYQGVVCMVLKLRRP--LTDYYWLN 296 (434)
T ss_pred eCC--ceEECCEEEECCCHHHHHhhc--CCCcH-------------HHHhhhcccCccceEEEEEEecCC--CCCCceee
Confidence 455 478999999997766433221 22211 112223333343333333333221 01111111
Q ss_pred ecCCCCCCCCCCcceeEEee---cCCCcEE--EEecCCC----CCCChHHHHHHHHHHHHhhcCc-----cceEEEeecC
Q 037878 306 GEYMDDPATIGHPVAMQKFF---ADTDIFL--FWSYGNS----VDITGPTVTEVAIKTVENMGGV-----IENVVLQRRF 371 (2280)
Q Consensus 306 ~~~~~~~~~~~~~~~~~~~~---~~~~~~~--~~~~g~~----~~~s~~e~~~~i~~~L~~~~~~-----p~~~~~~~~~ 371 (2280)
.... .....+. .....+. .+++... +..|... ..++++++.+.++++|+++.+. +....+.++.
T Consensus 297 ~~~~-~~~~~~~-~~~s~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~~~~~~~~~~~~r~~ 374 (434)
T PRK07233 297 INDP-GAPFGGV-IEHTNLVPPERYGGEHLVYLPKYLPGDHPLWQMSDEELLDRFLSYLRKMFPDFDRDDVRAVRISRAP 374 (434)
T ss_pred ecCC-CCCcceE-EEecccCCccccCCceEEEEeeecCCCChhhcCCHHHHHHHHHHHHHHhCCCCChhheeeEEEEEec
Confidence 1111 0001100 0000010 0012111 1112111 2367889999999999998642 3445666666
Q ss_pred CCCcccchhhhcchhhHHHHHH-hcCcCCceeccc
Q 037878 372 KYFPHVNSKDMKDGFYDRLEYE-LQGQRNTYYVGG 405 (2280)
Q Consensus 372 ~~~p~~s~~~~~~g~~~~l~~~-lqg~~~~~~~G~ 405 (2280)
...|.+++...+ .. .. .++..++|++|.
T Consensus 375 ~a~~~~~~g~~~-----~~-~~~~~~~~~l~~aG~ 403 (434)
T PRK07233 375 YAQPIYEPGYLD-----KI-PPYDTPIEGLYLAGM 403 (434)
T ss_pred cccccccCchhh-----cC-CCcccCcCCEEEeCC
Confidence 777776554221 11 12 244578999986
No 176
>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.
Probab=99.57 E-value=5.2e-14 Score=161.65 Aligned_cols=89 Identities=19% Similarity=0.244 Sum_probs=71.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.+.....+ ..+.||++|.|+.++.+.+.. .....++.|||+++||.++.+.+|++||++++|+++|
T Consensus 103 s~ig~~~~i~~~~~i---~~~~Ig~~~~ig~~~~~~~~~----~~~~~~~vigd~~~ig~~~~i~~~~~Ig~~~~i~~gs 175 (193)
T cd03353 103 STIGEGSKANHLSYL---GDAEIGEGVNIGAGTITCNYD----GVNKHRTVIGDNVFIGSNSQLVAPVTIGDGATIAAGS 175 (193)
T ss_pred ceEcCCCEeccccee---cccEECCCCEEcCceEEeccC----CccccCCEECCCeEEccCCEEeCCcEECCCcEECCCC
Confidence 456777766654322 237889999999888774321 2233578999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCC
Q 037878 1654 VAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~P 1671 (2280)
+|+++ +|+++++.|.|
T Consensus 176 ~V~~~--v~~~~~v~~~~ 191 (193)
T cd03353 176 TITKD--VPPGALAIARA 191 (193)
T ss_pred EEccc--cCCCCEEEecc
Confidence 99999 99999999998
No 177
>PRK10502 putative acyl transferase; Provisional
Probab=99.55 E-value=1.5e-14 Score=162.76 Aligned_cols=123 Identities=19% Similarity=0.244 Sum_probs=105.3
Q ss_pred chhHHHH-HHHHHHHHHh-hhcCCcchHHHHHHHhcCeee------------------ccCcEEEccceeeecCceeEEe
Q 037878 2151 MDTVWQA-FRTLVGEYFV-EMTSGSFLFVAWMKLMGAEIE------------------LGQGAYVDSMGAVLNPEMVEME 2210 (2280)
Q Consensus 2151 ~~~~~~~-~~~~~~~~~~-~~~~~~~~~~~~~r~~g~~ig------------------~~~~~~~~~~~~~~~~~~v~~g 2210 (2280)
+..+.+. |..+....|. .....+.++.++||+||++|| +|++++|+.++++.+.+.|+||
T Consensus 16 ~~~~~~~~w~~~~~~~~~~~~~~~~~~r~~~lr~~ga~iG~~~~I~~~a~i~~~~~~~IG~~~~Ig~~~~I~~~~~v~IG 95 (182)
T PRK10502 16 ASAWKVQLWWAVQATLFAWSPQPLYRWRAFLLRLFGAKIGKGVVIRPSVRITYPWKLTIGDYAWIGDDVWLYNLGEITIG 95 (182)
T ss_pred hHHHHHHHHHHHHHHhhcCCccchHHHHHHHHHHhccccCCCcEEcCCEEEecCCeEEECCCeEECCCceecccCceEEC
Confidence 4455556 6777665453 234458899999999999999 4777788888888888999999
Q ss_pred cCceEECCCceEee--ecccCCCcceEeeeEEEccCeEEccceeEcCCcEeCCCceecccceeecc
Q 037878 2211 GNGGCVGKEALLFG--HIYEGDGGKVKFGKIRIGEGGFVGSRAAAMPGVRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2211 ~~~~~~~~~~~~~~--h~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~s~~~~~ 2274 (2280)
++|+|+++|.|++ |.+.++++.+...+++||++||||++|+|+||++||++++|+++|+|+|.
T Consensus 96 -~~~~I~~~~~I~~~~h~~~~~~~~~~~~~i~Igd~~~Ig~~a~I~~Gv~Ig~~~vIga~svV~~~ 160 (182)
T PRK10502 96 -AHCVISQKSYLCTGSHDYSDPHFDLNTAPIVIGEGCWLAADVFVAPGVTIGSGAVVGARSSVFKS 160 (182)
T ss_pred -CCcEECCCeEEECCCCCCcCCCcccccCCEEEcCCcEEcCCCEEcCCCEECCCCEECCCCEEecc
Confidence 9999999999998 88776777888899999999999999999999999999999999999984
No 178
>PRK13627 carnitine operon protein CaiE; Provisional
Probab=99.53 E-value=1.4e-13 Score=155.32 Aligned_cols=115 Identities=15% Similarity=0.278 Sum_probs=93.6
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||++|.|.... ...+.||++++|++++.+ ..++||++|+||.+++|++|++||++++||++|
T Consensus 56 ~~Ig~~~~I~~~~----~~~siIg~~~~Ig~~a~i------------~g~vIG~~v~IG~ga~V~~g~~IG~~s~Vgags 119 (196)
T PRK13627 56 ANLQDGCIMHGYC----DTDTIVGENGHIGHGAIL------------HGCVIGRDALVGMNSVIMDGAVIGEESIVAAMS 119 (196)
T ss_pred CEECCCCEEeCCC----CCCCEECCCCEECCCcEE------------eeEEECCCCEECcCCccCCCcEECCCCEEcCCC
Confidence 5667777765432 125789999999999887 567899999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCceeeecccchhhHHHHHhHHHHHHHHHhhhhhh
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPVMIKNTMHALDDRIEEMDMKYKKIVGNLSANL 1705 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~~ 1705 (2280)
+|+++.++|++++|.|+|| +.+|....+..+.+.....+|.++.+++...+
T Consensus 120 ~V~~~~~ip~~~~~~G~Pa-~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 170 (196)
T PRK13627 120 FVKAGFQGEKRQLLMGTPA-RAVRSVSDDELHWKRLNTKEYQDLVGRCHASL 170 (196)
T ss_pred EEeCCcCcCCCcEEEecCC-EEeccCCHHHHHHHHhhHHHHHHHHHHHHHhc
Confidence 9999977799999999994 55666666555556667788999888886544
No 179
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=99.53 E-value=9.8e-14 Score=182.52 Aligned_cols=96 Identities=19% Similarity=0.213 Sum_probs=76.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.|+..+.+. .++||++|+||.++.+.+.. .....+++||++|+||.++.|.+|++||+|++||++|
T Consensus 349 ~~ig~~~~i~~~~~i~---~~~Ig~~~~ig~~~~~~~~~----~~~~~~~~Igd~~~ig~~~~i~~~~~ig~~~~i~~g~ 421 (451)
T TIGR01173 349 ARIGKGSKAGHLSYLG---DAEIGSNVNIGAGTITCNYD----GANKHKTIIGDGVFIGSNTQLVAPVKVGDGATIAAGS 421 (451)
T ss_pred cEECCCcEecceeeEe---eeEEcCCcEECCCeEEeCcc----cccCCCCEECCCcEECCCCEEECCcEECCCCEEccCC
Confidence 5677777777654332 38889999999888885422 2222468999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCceeeec
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPVMIKN 1678 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~~~~~ 1678 (2280)
+|+++ ||+++++.|.|+.+..++
T Consensus 422 ~v~~~--v~~~~~~~~~~~~~~~~~ 444 (451)
T TIGR01173 422 TVTKD--VPEGALAISRARQRNIEG 444 (451)
T ss_pred EECcc--CCCCcEEEccCceeeccc
Confidence 99999 999999999996554443
No 180
>PRK10502 putative acyl transferase; Provisional
Probab=99.50 E-value=8.5e-14 Score=156.71 Aligned_cols=116 Identities=22% Similarity=0.272 Sum_probs=88.6
Q ss_pred CCchHHHHHHHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEe--------------------e--cccCCC--
Q 037878 1561 GTEAFCIYLRLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRII--------------------P--GFYSSI-- 1616 (2280)
Q Consensus 1561 gt~~~~~~lR~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~--------------------~--~~~~~~-- 1616 (2280)
...+...+||++|++||+++.|.....+..|..++|||+|.|++++.|. + |.+...
T Consensus 39 ~~~~r~~~lr~~ga~iG~~~~I~~~a~i~~~~~~~IG~~~~Ig~~~~I~~~~~v~IG~~~~I~~~~~I~~~~h~~~~~~~ 118 (182)
T PRK10502 39 LYRWRAFLLRLFGAKIGKGVVIRPSVRITYPWKLTIGDYAWIGDDVWLYNLGEITIGAHCVISQKSYLCTGSHDYSDPHF 118 (182)
T ss_pred hHHHHHHHHHHhccccCCCcEEcCCEEEecCCeEEECCCeEECCCceecccCceEECCCcEECCCeEEECCCCCCcCCCc
Confidence 3356688999999999999999876655555566666665555555442 1 111111
Q ss_pred ceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeec
Q 037878 1617 GFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKN 1678 (2280)
Q Consensus 1617 ~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~ 1678 (2280)
....++++|||+|+||.+++|++|++||+|++||++|+|+++ +|+++++.|+||..+..|
T Consensus 119 ~~~~~~i~Igd~~~Ig~~a~I~~Gv~Ig~~~vIga~svV~~~--v~~~~v~~G~Pa~~ik~r 178 (182)
T PRK10502 119 DLNTAPIVIGEGCWLAADVFVAPGVTIGSGAVVGARSSVFKS--LPANTICRGNPAVPIRPR 178 (182)
T ss_pred ccccCCEEEcCCcEEcCCCEEcCCCEECCCCEECCCCEEecc--cCCCcEEECCcceEeccc
Confidence 123477999999999999999999999999999999999999 999999999996544333
No 181
>PLN02472 uncharacterized protein
Probab=99.49 E-value=4.9e-13 Score=155.22 Aligned_cols=119 Identities=17% Similarity=0.329 Sum_probs=96.1
Q ss_pred CeeCCCceeccCCc--ccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEcc
Q 037878 1574 AKIGRYCSIRAINP--VSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGA 1651 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~--~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~ 1651 (2280)
+.||++|.|..... ...++.+.||++|+|+++|.| ..++||++|+||.+++|++|+.||++++||+
T Consensus 105 t~Ig~~~vI~~~~~~~~~i~~~tvIG~~v~IG~~s~L------------~~~~Igd~v~IG~~svI~~gavIg~~~~Ig~ 172 (246)
T PLN02472 105 SNVQERCVLHAAWNSPTGLPAETLIDRYVTIGAYSLL------------RSCTIEPECIIGQHSILMEGSLVETHSILEA 172 (246)
T ss_pred CEECCCCEEeecCccccCCCCCcEECCCCEECCCcEE------------CCeEEcCCCEECCCCEECCCCEECCCCEECC
Confidence 45555555543210 022456899999999999988 5679999999999999999999999999999
Q ss_pred CccccCCCccCCCcEEecCCCceeeecccchhhHHHHHhHHHHHHHHHhhhhhh
Q 037878 1652 LSVAPMHSVLQRGGIYIGSQSPVMIKNTMHALDDRIEEMDMKYKKIVGNLSANL 1705 (2280)
Q Consensus 1652 ~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~~ 1705 (2280)
+|+|+.+..+|+|++|.|+|| +.++....+....+......|+++.+++..++
T Consensus 173 gsvV~~g~~Ip~g~~~~G~PA-~~~~~~~~~~~~~l~~~a~~y~~l~k~~~~~~ 225 (246)
T PLN02472 173 GSVLPPGRRIPTGELWAGNPA-RFVRTLTNEETLEIPKLAVAINDLSQSHFSEF 225 (246)
T ss_pred CCEECCCCEeCCCCEEEecCC-EEeccCCHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 999998888999999999995 55566666666777788889999999887766
No 182
>PLN02296 carbonate dehydratase
Probab=99.48 E-value=4.5e-13 Score=157.63 Aligned_cols=100 Identities=15% Similarity=0.287 Sum_probs=85.9
Q ss_pred ceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1593 QVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1593 ~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
.+.||++|+|+++|.| ..++||++|+||.+++|++|++||++++||++|+|+++..+|++++|.|+|
T Consensus 119 ~siIG~~v~IG~~avI------------~g~~Igd~v~IG~ga~I~~gv~Ig~~a~IgagSvV~~~~~I~~~~~~~G~P- 185 (269)
T PLN02296 119 PTIIGDNVTIGHSAVL------------HGCTVEDEAFVGMGATLLDGVVVEKHAMVAAGALVRQNTRIPSGEVWAGNP- 185 (269)
T ss_pred CcEeCCCCEECCCcee------------cCCEECCCcEECCCcEECCCeEECCCCEECCCCEEecCCEeCCCeEEeccC-
Confidence 3788888888888877 457999999999999999999999999999999999998899999999999
Q ss_pred ceeeecccchhhHHHHHhHHHHHHHHHhhhhhh
Q 037878 1673 PVMIKNTMHALDDRIEEMDMKYKKIVGNLSANL 1705 (2280)
Q Consensus 1673 ~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~~ 1705 (2280)
++.+|.........+.....+|.++.+++..+.
T Consensus 186 A~~ir~~~~~~~~~~~~~a~~y~~l~~~~~~~~ 218 (269)
T PLN02296 186 AKFLRKLTEEEIAFISQSATNYSNLAQVHAAEN 218 (269)
T ss_pred cEEeCCCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 556677766666667777888888888876654
No 183
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.48 E-value=3.1e-13 Score=177.40 Aligned_cols=92 Identities=18% Similarity=0.249 Sum_probs=72.8
Q ss_pred eeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCcc
Q 037878 1575 KIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSV 1654 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~ 1654 (2280)
.||+++.|+....+ ..+.||++|+||.++.+... .+....+++||++|+||.+++|.+|++||++++||++|+
T Consensus 350 ~i~~~~~i~~~~~~---~~~~i~~~~~iG~~~~~~~~----~~~~~~~~~Ig~~~~iG~~~~i~~~~~ig~~~~v~~~~~ 422 (450)
T PRK14360 350 QLGEGSKVNHLSYI---GDATLGEQVNIGAGTITANY----DGVKKHRTVIGDRSKTGANSVLVAPITLGEDVTVAAGST 422 (450)
T ss_pred ccCCCcEeccceec---CCceecCCcEECccceeccc----cccccCCcEeCCCeEeCCCCEEeCCcEECCCCEECCCCE
Confidence 35566666543222 23788999999998887532 133345789999999999999999999999999999999
Q ss_pred ccCCCccCCCcEEecCCCcee
Q 037878 1655 APMHSVLQRGGIYIGSQSPVM 1675 (2280)
Q Consensus 1655 v~~~~~v~~~~~~~G~Pa~~~ 1675 (2280)
|+++ +|+++++.|+|+...
T Consensus 423 v~~~--~~~~~~~~g~~~~~~ 441 (450)
T PRK14360 423 ITKD--VPDNSLAIARSRQVI 441 (450)
T ss_pred ECcc--CCCCCEEEeccceee
Confidence 9999 999999999995433
No 184
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.46 E-value=8.8e-13 Score=172.80 Aligned_cols=90 Identities=14% Similarity=0.197 Sum_probs=69.1
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
..||+++.+...+.+ ..+.||++|.||.++.+.+. .......+.||++|+||+++.|.+|++||++++|+++|
T Consensus 356 ~~ig~~~~~~~~~~i---g~~~ig~~~~ig~~~~~~~~----~~~~~~~~~ig~~~~ig~~~~i~~~~~ig~~~~i~a~s 428 (459)
T PRK14355 356 IVMGEGSKASHLTYL---GDATIGRNVNIGCGTITCNY----DGVKKHRTVIEDDVFVGSDVQFVAPVTVGRNSLIAAGT 428 (459)
T ss_pred CEECCCceeeeeccc---cCCEECCCCEEccceeecCc----CCccccCcEecCCeEEcCCCEEeCCcEECCCCEECCCC
Confidence 346666666543222 23677777888777666321 12233568999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCC
Q 037878 1654 VAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa 1672 (2280)
+|.++ +|+++++.|++.
T Consensus 429 ~v~~~--v~~~~~~~~~~~ 445 (459)
T PRK14355 429 TVTKD--VPPDSLAIARSP 445 (459)
T ss_pred EEccc--CCCCcEEEeccc
Confidence 99999 999999999883
No 185
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.45 E-value=7.2e-13 Score=173.63 Aligned_cols=90 Identities=16% Similarity=0.208 Sum_probs=72.3
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.+++.+.+ ..++||++|+||.++.+.+.. .....+++|||+|+||.+++|.+|++||++++||++|
T Consensus 353 ~~i~~~~~~~~~~~~---g~~~ig~~~~ig~~~~~~~~~----~~~~~~~~Igd~~~ig~~~~i~~~~~ig~~~~i~~gs 425 (456)
T PRK09451 353 ARLGKGSKAGHLTYL---GDAEIGDNVNIGAGTITCNYD----GANKFKTIIGDDVFVGSDTQLVAPVTVGKGATIGAGT 425 (456)
T ss_pred eeeCCCCccCccccc---cccEECCCCEEcCCeEEeccc----CcccCCCEECCCcEECCCCEEeCCcEECCCCEECCCC
Confidence 567777777664322 348999999999999885432 1112358999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEec-CCC
Q 037878 1654 VAPMHSVLQRGGIYIG-SQS 1672 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G-~Pa 1672 (2280)
+|++| +|+++.+.| .|+
T Consensus 426 ~v~~~--v~~~~~~~~~~~~ 443 (456)
T PRK09451 426 TVTRD--VAENELVISRVPQ 443 (456)
T ss_pred EEccc--cCCCCEEEeccCc
Confidence 99999 999999965 664
No 186
>PRK09188 serine/threonine protein kinase; Provisional
Probab=99.44 E-value=5.1e-13 Score=165.05 Aligned_cols=115 Identities=13% Similarity=0.043 Sum_probs=89.0
Q ss_pred CCceeecCcEEEE-E-CCeEEEEecCCCeEEECC---eeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccC
Q 037878 889 GRKYTRTGDLGRI-I-DGKFFITGRIKDLIIVAG---RNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSD 963 (2280)
Q Consensus 889 ~~~~yrTGDlgr~-~-dG~l~~~GR~dd~IKi~G---~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~ 963 (2280)
.+|||+|||+|++ | ||+++|+||.| +| ++|+|. ||++|.+||+|.+ |+|++++++..++
T Consensus 207 ~dgW~~TGDlg~~~d~dG~l~~~gR~~-----~G~~i~nV~p~-IE~~L~~hp~V~e---aaVvgvpd~~~ge------- 270 (365)
T PRK09188 207 SRIWLATGKKVYNFITRGLFSWSDGEG-----TGDRIDNEAPA-IQAALKSDPAVSD---VAIALFSLPAKGV------- 270 (365)
T ss_pred cCcEEeCCCEEEEEcCCCeEEEEecCc-----CCcCceeeCHH-HHHHHHhCCCccE---EEEEEEEcCCCCe-------
Confidence 4699999999998 5 99999999998 88 799999 9999999999976 9999998875542
Q ss_pred CCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHh
Q 037878 964 GSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQF 1030 (2280)
Q Consensus 964 ~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~ 1030 (2280)
.+.++++. .. ....+++.++++++|+. ++|.. +..+++||+|+||||+|++|++..
T Consensus 271 ---~v~A~Vv~--~~-~~~~~el~~~l~~~L~~--kvP~~---v~~v~~lP~t~~GKi~R~~Lr~~~ 326 (365)
T PRK09188 271 ---GLYAFVEA--EL-PADEKSLRARLAGAKPP--KPPEH---IQPVAALPRDADGTVRDDILRLIA 326 (365)
T ss_pred ---EEEEEEEE--CC-CCCHHHHHHHHHhhchh--cCCcE---EEEECCCCCCCCCCccHHHHHHHh
Confidence 23333322 21 22335778888888775 55543 334489999999999999987764
No 187
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.44 E-value=1.3e-12 Score=171.98 Aligned_cols=90 Identities=17% Similarity=0.196 Sum_probs=70.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.|.....+ ..+.||++|+||.++.+.+... ...+.+.||++|+||.+++|.+|++||++++||++|
T Consensus 358 ~~I~~~~~i~~~~~i---~~~~Ig~~~~IG~~~~i~~~~~----~~~~~~~IGd~~~iG~~~~i~~~~~Ig~~~~igags 430 (482)
T PRK14352 358 ATIGRGTKVPHLTYV---GDADIGEHSNIGASSVFVNYDG----VNKHRTTIGSHVRTGSDTMFVAPVTVGDGAYTGAGT 430 (482)
T ss_pred cEECCCcEEccCcee---cccEECCCcEECCCcEEecccc----ccCCCCeECCCcEECCCCEEeCCCEECCCcEECCCC
Confidence 446666666543322 2378999999999988754321 123568999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEe-cCCC
Q 037878 1654 VAPMHSVLQRGGIYI-GSQS 1672 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~-G~Pa 1672 (2280)
+|+++ +|+++++. |+|+
T Consensus 431 ~v~~~--v~~~~~~~~~~p~ 448 (482)
T PRK14352 431 VIRED--VPPGALAVSEGPQ 448 (482)
T ss_pred EEcCC--CCCCcEEEecccc
Confidence 99999 99999865 8995
No 188
>PRK09527 lacA galactoside O-acetyltransferase; Reviewed
Probab=99.43 E-value=6e-13 Score=150.12 Aligned_cols=104 Identities=17% Similarity=0.177 Sum_probs=88.3
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeeccc-------CCCceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFY-------SSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~-------~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
.++||+++.|+.++.+.+.+.++|||+|+|+++|.|.++.+ ..+....++++||++||||.+++|.+|++||+
T Consensus 75 ni~IG~~v~In~~~~I~d~~~I~IGd~v~Ig~~v~I~~~~h~~~~~~r~~g~~~~~pi~IGd~v~IG~~~~I~~gv~IG~ 154 (203)
T PRK09527 75 NIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGD 154 (203)
T ss_pred CcEEcCCcEECCCcEEecCCCEEECCCCEECCCCEEEeCCCCCChhhccccccccCCeEECCCcEECCCCEEcCCCEECC
Confidence 57899999999877676677899999999999999975432 12233557899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
+++||++|+|+++ +|++++|.|+||. .+|+.
T Consensus 155 ~~vIgagsvV~kd--vp~~~v~~G~PAk-~i~~~ 185 (203)
T PRK09527 155 NSVIGAGSVVTKD--IPPNVVAAGVPCR-VIREI 185 (203)
T ss_pred CCEECCCCEEccc--CCCCcEEEeeCCE-EeccC
Confidence 9999999999999 9999999999954 44544
No 189
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.42 E-value=1.3e-12 Score=171.37 Aligned_cols=74 Identities=20% Similarity=0.237 Sum_probs=61.0
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
+.||++|.||.++.+.+.. +....+++|||+++||.++.|.+|++||++++||++|+|+++ +|+++.+.|+|..
T Consensus 359 ~~Ig~~~~ig~~~~~~~~~----~~~~~~~~Igd~~~ig~~~~i~~gv~Ig~~~~i~ag~~v~~~--v~~~~~~~g~~~~ 432 (448)
T PRK14357 359 ATVGKNVNIGAGTITCNYD----GKKKNPTFIEDGAFIGSNSSLVAPVRIGKGALIGAGSVITED--VPPYSLALGRARQ 432 (448)
T ss_pred cEECCCcEECCCccccccc----ccccCCcEECCCCEECCCCEEeCCcEECCCCEEcCCCEECCc--CCCCcEEEccccE
Confidence 6677777777776552211 112356899999999999999999999999999999999999 9999999999943
No 190
>TIGR02287 PaaY phenylacetic acid degradation protein PaaY. Members of this family are located next to other genes organized into apparent operons for phenylacetic acid degradation. PaaY is located near the end of these gene clusters and often next to PaaX, a transcriptional regulator.
Probab=99.42 E-value=2e-12 Score=145.37 Aligned_cols=115 Identities=16% Similarity=0.240 Sum_probs=91.6
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||++|.|.... -+.+.||++++|++++.| ..++||++|+||.++.+.+|++||++++||++|
T Consensus 54 t~Ig~~~~I~~~~----~~~siIg~~~~Ig~~a~I------------~~siIg~~~~IG~ga~I~~g~~IG~~s~Vgags 117 (192)
T TIGR02287 54 ANIQDNCVMHGFP----GQDTVVEENGHVGHGAIL------------HGCIVGRNALVGMNAVVMDGAVIGENSIVAASA 117 (192)
T ss_pred CEECCCeEEeccC----CCCCeECCCCEECCCCEE------------cCCEECCCCEECCCcccCCCeEECCCCEEcCCC
Confidence 4566666653211 134789999999999887 678999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCceeeecccchhhHHHHHhHHHHHHHHHhhhhhh
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPVMIKNTMHALDDRIEEMDMKYKKIVGNLSANL 1705 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~~ 1705 (2280)
+|+++..+|++++|.|+| ++.+|....+....+.+...+|.++.+++....
T Consensus 118 ~V~~~~~ip~~~l~~G~P-ak~i~~~~~~~~~~~~~~~~~y~~~~~~~~~~~ 168 (192)
T TIGR02287 118 FVKAGAEMPAQYLVVGSP-AKVIRELSEQELAWKKQGTHEYQVLATRCKQTL 168 (192)
T ss_pred EECCCCEECCCeEEEccC-CEEeccCCHHHHHHHHHhHHHHHHHHHHHHHhC
Confidence 999988899999999999 455555555445555567788888888886554
No 191
>COG1045 CysE Serine acetyltransferase [Amino acid transport and metabolism]
Probab=99.42 E-value=7e-13 Score=142.24 Aligned_cols=110 Identities=22% Similarity=0.195 Sum_probs=90.8
Q ss_pred hhhhccCCchHHHHHHHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccC
Q 037878 1555 FAKLLSGTEAFCIYLRLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQ 1634 (2280)
Q Consensus 1555 ~~~~l~gt~~~~~~lR~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~ 1634 (2280)
+.+.++|.+.-| ||+||++.+|.+..-+.+-+-..|||||.|-++++|++..-.++ ..+.+||+++.||++
T Consensus 61 ~~~~~~gieIhp------~A~IG~g~fIdHg~GvVIgeta~IGddv~I~~gVTLGgtg~~~g---~RhPtIg~~V~IGag 131 (194)
T COG1045 61 LSRFLFGIEIHP------GAKIGRGLFIDHGTGVVIGETAVIGDDVTIYHGVTLGGTGKESG---KRHPTIGNGVYIGAG 131 (194)
T ss_pred HHHhhcceeeCC------CCeECCceEEcCCceEEEcceeEECCCeEEEcceEecCCCCcCC---CCCCccCCCeEECCC
Confidence 445566666666 88999999998776566677788888888888888865444444 367899999999999
Q ss_pred CeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCcee
Q 037878 1635 SLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVM 1675 (2280)
Q Consensus 1635 ~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~ 1675 (2280)
+.|+.+.+||||+.|||+|+|.+| +|++++++|.||..+
T Consensus 132 AkILG~I~IGd~akIGA~sVVlkd--VP~~~tvvGvPArii 170 (194)
T COG1045 132 AKILGNIEIGDNAKIGAGSVVLKD--VPPNATVVGVPARVI 170 (194)
T ss_pred CEEEcceEECCCCEECCCceEccC--CCCCceEecCcceEe
Confidence 999999999999999999999999 999999999995444
No 192
>TIGR02731 phytoene_desat phytoene desaturase. Plants and cyanobacteria (and, supposedly, Chlorobium tepidum) have a conserved pathway from two molecules geranylgeranyl-PP to one of all-trans-lycopene. Members of this family are the enzyme pytoene desaturase (also called phytoene dehydrogenase). This model does not include the region of the chloroplast transit peptide in plants. A closely related family, excluded by this model, is zeta-carotene desaturase, another enzyme in the same pathway.
Probab=99.41 E-value=1.1e-11 Score=162.98 Aligned_cols=42 Identities=36% Similarity=0.512 Sum_probs=39.9
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEe
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVE 65 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~ 65 (2280)
+|+|||||++||+||++|+++|+ +|+|+|+++++||+++|.+
T Consensus 1 ~v~IiGaG~aGl~aA~~L~~~G~-~v~vlE~~~~~GG~~~s~~ 42 (453)
T TIGR02731 1 RVAIAGAGLAGLSCAKYLADAGH-TPIVLEARDVLGGKVAAWK 42 (453)
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCCCcceeE
Confidence 59999999999999999999998 6999999999999999974
No 193
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.41 E-value=2.3e-12 Score=168.79 Aligned_cols=73 Identities=21% Similarity=0.293 Sum_probs=62.1
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
+.||++|.|+.++.+.+.. ......++||++|+||++++|.+|++||++++||++|+|.++ +|+++.+.|.|.
T Consensus 356 ~~ig~~~~Ig~~~~~~~~~----~~~~~~~~Ig~~~~ig~~~~i~~~~~Ig~~~~ig~~s~v~~~--v~~~~~~~g~~~ 428 (446)
T PRK14353 356 ATIGAGANIGAGTITCNYD----GFNKHRTEIGAGAFIGSNSALVAPVTIGDGAYIASGSVITED--VPDDALALGRAR 428 (446)
T ss_pred cEEcCCcEECCceeeeccc----cccCCCcEECCCcEECCCCEEeCCCEECCCCEECCCCEECcc--CCCCCEEEecCc
Confidence 5788888888887663221 112246899999999999999999999999999999999999 999999999994
No 194
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.39 E-value=3.3e-12 Score=167.06 Aligned_cols=88 Identities=17% Similarity=0.167 Sum_probs=69.5
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.|++++.+++...+ ..++||++|+||.++.+.+... .....++||++|+||+++++.++++||++++||++|
T Consensus 358 ~~i~~~~~ig~~~~~---~~~~ig~~~~ig~~~~i~~~~~----~~~~~~~Ig~~~~ig~~~~i~~~~~Ig~~~~i~~gs 430 (481)
T PRK14358 358 ARLDAGVKAGHLAYL---GDVTIGAETNVGAGTIVANFDG----VNKHQSKVGAGVFIGSNTTLIAPRVVGDAAFIAAGS 430 (481)
T ss_pred ceecCCcccCceEEE---CCeEEcCCceEcCCEEEeCCCC----ccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCC
Confidence 345555555543222 3389999999999998865321 223567999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecC
Q 037878 1654 VAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~ 1670 (2280)
+|+++ +|+++.+.+.
T Consensus 431 ~v~~~--v~~~~~~~~~ 445 (481)
T PRK14358 431 AVHDD--VPEGAMAVAR 445 (481)
T ss_pred EEecc--cCCCCEEEec
Confidence 99999 9999999864
No 195
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.39 E-value=2.6e-12 Score=169.05 Aligned_cols=90 Identities=18% Similarity=0.189 Sum_probs=72.1
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.+++...+ ..+.||++|+|+.++.+.++. .....+++|||++++|.++.|.+|++||++++||++|
T Consensus 352 ~~i~~~~~i~~~~~~---~~~~ig~~~~ig~~~~~~~~~----~~~~~~~~igd~~~ig~~s~i~~~~~ig~~~~v~~~~ 424 (458)
T PRK14354 352 STIGEGTKVSHLTYI---GDAEVGENVNIGCGTITVNYD----GKNKFKTIIGDNAFIGCNSNLVAPVTVGDNAYIAAGS 424 (458)
T ss_pred eEECCCCEecceeee---cCcccCCceEEcCceeecccc----cccccCCEECCCcEEccCCEEeCCcEECCCCEECCCC
Confidence 456666666654333 237888888888888775432 2223468999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCC
Q 037878 1654 VAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa 1672 (2280)
+|.++ +|+++++.|+|.
T Consensus 425 ~v~~~--~~~~~~~~~~~~ 441 (458)
T PRK14354 425 TITKD--VPEDALAIARAR 441 (458)
T ss_pred EECCC--CCCCCEEEeccc
Confidence 99999 999999999993
No 196
>TIGR02733 desat_CrtD C-3',4' desaturase CrtD. Members of this family are slr1293, a carotenoid biosynthesis protein which was shown to be the C-3',4' desaturase (CrtD) of myxoxanthophyll biosynthesis in Synechocystis sp. strain PCC 6803, and close homologs (presumed to be functionally equivalent) from other cyanobacteria, where myxoxanthophyll biosynthesis is either known or expected. This enzyme can act on neurosporene and so presumably catalyzes the first step that is committed to myxoxanthophyll.
Probab=99.39 E-value=4.4e-12 Score=168.28 Aligned_cols=54 Identities=33% Similarity=0.477 Sum_probs=48.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeee
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEM 76 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~ 76 (2280)
+||+|||||++||+||.+|+++|+ +|+|+||++++||+++|++.+++.++.+..
T Consensus 2 ~dvvIIGaG~~GL~aa~~La~~G~-~v~vlE~~~~~GG~~~t~~~~G~~fD~G~~ 55 (492)
T TIGR02733 2 TSVVVIGAGIAGLTAAALLAKRGY-RVTLLEQHAQPGGCAGTFRRRGFTFDVGAT 55 (492)
T ss_pred CeEEEECcCHHHHHHHHHHHHCCC-eEEEEecCCCCCCccceeccCCEEEeecce
Confidence 689999999999999999999999 699999999999999999887766665543
No 197
>TIGR02734 crtI_fam phytoene desaturase. Phytoene is converted to lycopene by desaturation at four (two symmetrical pairs of) sites. This is achieved by two enzymes (crtP and crtQ) in cyanobacteria (Gloeobacter being an exception) and plants, but by a single enzyme in most other bacteria and in fungi. This single enzyme is called the bacterial-type phytoene desaturase, or CrtI. Most members of this family, part of the larger Pfam family pfam01593, which also contains amino oxidases, are CrtI itself; it is likely that all members act on either phytoene or on related compounds such as dehydrosqualene, for carotenoid biosynthesis.
Probab=99.38 E-value=1.3e-11 Score=164.36 Aligned_cols=64 Identities=22% Similarity=0.337 Sum_probs=52.4
Q ss_pred CeEEEEcCCHHHHHHHHHhH---CCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcc
Q 037878 179 GKIRRFKGGYTSLWQKLSKY---LPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFP 245 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~---lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~ 245 (2280)
...+.+.||+..+.++|++. .|++|+++++|++|..+++++ +.|++.+| ++++||+||+|+++.
T Consensus 209 ~g~~~~~gG~~~l~~al~~~~~~~G~~i~~~~~V~~i~~~~~~~-~~V~~~~g--~~~~ad~VI~a~~~~ 275 (502)
T TIGR02734 209 WGVWFPRGGTGALVAAMAKLAEDLGGELRLNAEVIRIETEGGRA-TAVHLADG--ERLDADAVVSNADLH 275 (502)
T ss_pred ceEEEcCCCHHHHHHHHHHHHHHCCCEEEECCeEEEEEeeCCEE-EEEEECCC--CEEECCEEEECCcHH
Confidence 45667899999999999864 488999999999999877654 56777788 478999999996654
No 198
>COG3380 Predicted NAD/FAD-dependent oxidoreductase [General function prediction only]
Probab=99.38 E-value=1.7e-12 Score=143.99 Aligned_cols=303 Identities=19% Similarity=0.232 Sum_probs=164.7
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecCCCCceeecccccchh
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQDIKVADDYV 101 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (2280)
.+|+|||+|++||+||+.|+++|. +|+||||+.-+|||+.|.+.++..++. +..|++.....|
T Consensus 2 ~siaIVGaGiAGl~aA~~L~~aG~-~vtV~eKg~GvGGRlAtRRl~~g~~Dh------GAqYfk~~~~~F---------- 64 (331)
T COG3380 2 PSIAIVGAGIAGLAAAYALREAGR-EVTVFEKGRGVGGRLATRRLDGGRFDH------GAQYFKPRDELF---------- 64 (331)
T ss_pred CcEEEEccchHHHHHHHHHHhcCc-EEEEEEcCCCcccchheeccCCccccc------cceeecCCchHH----------
Confidence 369999999999999999999999 799999999999999998877655432 222222211111
Q ss_pred hhhccccccchhhhhccccchhhHHHhhhhhhhHHHHHcCCCCcchhhhhhhhcccccccccccHHHHHHHHhhccCCeE
Q 037878 102 SVISLTLELQDKAKESGRIGVHAVSDLASDLTPTYLEDRGFKSVPKSVAYGYTASGYGFVQDMPYAYIHEFTRTSMAGKI 181 (2280)
Q Consensus 102 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 181 (2280)
.+.. +-+.+.++-..-....+.+...+. .......-
T Consensus 65 ----------------------------~~~V-e~~~~~glV~~W~~~~~~~~~~~~---------------~~~~d~~p 100 (331)
T COG3380 65 ----------------------------LRAV-EALRDDGLVDVWTPAVWTFTGDGS---------------PPRGDEDP 100 (331)
T ss_pred ----------------------------HHHH-HHHHhCCceeeccccccccccCCC---------------CCCCCCCc
Confidence 0000 011111111110000110000000 00011111
Q ss_pred EEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChhhH
Q 037878 182 RRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTE 261 (2280)
Q Consensus 182 ~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~ 261 (2280)
|.-.-||+.|.+.++..+ +|+++++|++|.+.++.| ++++++|. +...+|.||+|.|.| ++.
T Consensus 101 yvg~pgmsalak~LAtdL--~V~~~~rVt~v~~~~~~W--~l~~~~g~-~~~~~d~vvla~PAP-------------Q~~ 162 (331)
T COG3380 101 YVGEPGMSALAKFLATDL--TVVLETRVTEVARTDNDW--TLHTDDGT-RHTQFDDVVLAIPAP-------------QTA 162 (331)
T ss_pred cccCcchHHHHHHHhccc--hhhhhhhhhhheecCCee--EEEecCCC-cccccceEEEecCCC-------------cch
Confidence 456678999999999887 899999999999998888 66665553 467899999997766 222
Q ss_pred hhhcc--CCCChhhHhhhccceeeeeEEEEEeecC-cccCCc-e-------eEEEecCCCCCCCCCCcceeEEeecCCCc
Q 037878 262 SETQV--MDMDELEKELFSKVQTIDYYTTVLKITG-LEHLPV-G-------FYYFGEYMDDPATIGHPVAMQKFFADTDI 330 (2280)
Q Consensus 262 ~~l~~--~~l~~~~k~~~~~~~~~~~~~~i~~~~~-l~~~p~-~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 330 (2280)
..+.. -++....+..+....|.+.++.+...+. +++ |. + ......+..++... +....
T Consensus 163 ~LLt~~~~~~p~~l~~~~a~V~y~Pc~s~~lg~~q~l~~-P~~G~~vdg~~laWla~d~sK~g~~----------p~~~~ 231 (331)
T COG3380 163 TLLTTDADDLPAALRAALADVVYAPCWSAVLGYPQPLDR-PWPGNFVDGHPLAWLARDASKKGHV----------PDGEI 231 (331)
T ss_pred hhcCcccccchHHHHHhhccceehhHHHHHhcCCccCCC-CCCCcccCCCeeeeeeccccCCCCC----------CcCce
Confidence 22211 1222323333444444444443333221 111 11 0 11111111111111 11111
Q ss_pred EEEEec----CCCCCCChHHHHHHHHHHHHhhc----CccceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCcee
Q 037878 331 FLFWSY----GNSVDITGPTVTEVAIKTVENMG----GVIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTYY 402 (2280)
Q Consensus 331 ~~~~~~----g~~~~~s~~e~~~~i~~~L~~~~----~~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~ 402 (2280)
+.+-.. ....+.++|+....+......+. .+|+.....+|.+.+|+-....- -+ --+..-.+|.
T Consensus 232 ~vvqasp~wSr~h~~~~~e~~i~~l~aA~~~~~~~~~~~p~~s~~H~WrYA~P~~~~~~~------~L--~ad~~~~l~~ 303 (331)
T COG3380 232 WVVQASPDWSREHLDHPAEQVIVALRAAAQELDGDRLPEPDWSDAHRWRYAIPNDAVAGP------PL--DADRELPLYA 303 (331)
T ss_pred EEEEeCchHHHHhhcCCHHHHHHHHHHhhhhccCCCCCcchHHHhhccccccccccccCC------cc--ccCCCCceee
Confidence 111100 11144566777766666666653 44888888888888887654432 11 0133467888
Q ss_pred ccccccccccccCchhhHHh
Q 037878 403 VGGLMAFELTERNSSYSMAL 422 (2280)
Q Consensus 403 ~G~~~~~~~~~~~~~y~~~l 422 (2280)
||-+++-+-.|......++.
T Consensus 304 cGDwc~GgrVEgA~LSGlAa 323 (331)
T COG3380 304 CGDWCAGGRVEGAVLSGLAA 323 (331)
T ss_pred ecccccCcchhHHHhccHHH
Confidence 88887776666655544443
No 199
>COG1233 Phytoene dehydrogenase and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.37 E-value=5.3e-12 Score=165.23 Aligned_cols=56 Identities=30% Similarity=0.446 Sum_probs=51.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeee
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEM 76 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~ 76 (2280)
+.+||+|||||++||+||.+|+++|+ +|+|+||++++||+++|.+.+++.++.++.
T Consensus 2 ~~~dvvVIGaG~~GL~aAa~LA~~G~-~V~VlE~~~~~GG~a~t~e~~Gf~fd~G~~ 57 (487)
T COG1233 2 PMYDVVVIGAGLNGLAAAALLARAGL-KVTVLEKNDRVGGRARTFELDGFRFDTGPS 57 (487)
T ss_pred CCccEEEECCChhHHHHHHHHHhCCC-EEEEEEecCCCCcceEEEeccceEeccCcc
Confidence 46899999999999999999999999 699999999999999999999888877764
No 200
>cd05825 LbH_wcaF_like wcaF-like: This group is composed of the protein product of the E. coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms.
Probab=99.36 E-value=2.8e-12 Score=131.51 Aligned_cols=98 Identities=20% Similarity=0.262 Sum_probs=85.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecc--cCCC--ceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGF--YSSI--GFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~--~~~~--~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.+||+++.|+..+.+.....++|||+|.|++++.|.++. +... ....++++||++|+||.++.+.+|++||++|+|
T Consensus 4 i~iG~~~~I~~~~~i~~~~~i~IG~~~~I~~~~~I~~~~h~~~~~~~~~~~~~v~Ig~~~~ig~~~~i~~g~~Ig~~~~i 83 (107)
T cd05825 4 LTIGDNSWIGEGVWIYNLAPVTIGSDACISQGAYLCTGSHDYRSPAFPLITAPIVIGDGAWVAAEAFVGPGVTIGEGAVV 83 (107)
T ss_pred EEECCCCEECCCCEEeeCCceEECCCCEECCCeEeecCCCCCCcCccceecCCEEECCCCEECCCCEECCCCEECCCCEE
Confidence 579999999988777766789999999999999997533 2222 236789999999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCCCc
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
|++|+|+++ +|+++.|.|+||+
T Consensus 84 ~~gs~v~~~--~~~~~~~~G~Pa~ 105 (107)
T cd05825 84 GARSVVVRD--LPAWTVYAGNPAV 105 (107)
T ss_pred CCCCEEeCc--CCCCCEEECCccE
Confidence 999999998 9999999999964
No 201
>PF01593 Amino_oxidase: Flavin containing amine oxidoreductase This is a subset of the Pfam family; InterPro: IPR002937 This entry consists of various amine oxidases, including maize polyamine oxidase (PAO) [], L-amino acid oxidases (LAO) and various flavin containing monoamine oxidases (MAO). The aligned region includes the flavin binding site of these enzymes. In vertebrates MAO plays an important role in regulating the intracellular levels of amines via their oxidation; these include various neurotransmitters, neurotoxins and trace amines []. In lower eukaryotes such as aspergillus and in bacteria the main role of amine oxidases is to provide a source of ammonium []. PAOs in plants, bacteria and protozoa oxidise spermidine and spermine to an aminobutyral, diaminopropane and hydrogen peroxide and are involved in the catabolism of polyamines []. Other members of this family include tryptophan 2-monooxygenase, putrescine oxidase, corticosteroid binding proteins and antibacterial glycoproteins.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2Z3Y_A 2UXN_A 2Y48_A 2HKO_A 2XAF_A 2X0L_A 2XAJ_A 2UXX_A 2V1D_A 2Z5U_A ....
Probab=99.36 E-value=3.7e-12 Score=167.82 Aligned_cols=212 Identities=14% Similarity=0.095 Sum_probs=119.9
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTS 257 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~ 257 (2280)
.+.+....|++..+...+++..|.+|++|++|++|+.+++++ .+.+.+| ++++||+||+|+|++....+.|.|+.+
T Consensus 201 ~~~~~~~~g~~~~~~~~~~~~~g~~i~l~~~V~~I~~~~~~v--~v~~~~g--~~~~ad~VI~a~p~~~l~~i~~~p~l~ 276 (450)
T PF01593_consen 201 FGGLTVGMGGLSLALALAAEELGGEIRLNTPVTRIEREDGGV--TVTTEDG--ETIEADAVISAVPPSVLKNILLLPPLP 276 (450)
T ss_dssp SSTEEEETTTTHHHHHHHHHHHGGGEESSEEEEEEEEESSEE--EEEETTS--SEEEESEEEE-S-HHHHHTSEEESTSH
T ss_pred ccceeecccchhHHHHHHHhhcCceeecCCcceecccccccc--ccccccc--eEEecceeeecCchhhhhhhhhccccc
Confidence 345566778888888888888888999999999999999855 6777788 478999999999988777777777665
Q ss_pred hhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC-cccCC-ceeEEEecCCCCCCCCCCcceeEEeecC---CC-cE
Q 037878 258 KPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG-LEHLP-VGFYYFGEYMDDPATIGHPVAMQKFFAD---TD-IF 331 (2280)
Q Consensus 258 ~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~-l~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~-~~ 331 (2280)
......+ ..+.+.......+.... +.... ..+++...... .. ........... .+ ..
T Consensus 277 ~~~~~a~-------------~~~~~~~~~~v~l~~~~~~~~~~~~~~~~~~~~~~--~~--~~~~~~~~~~~~~~~~~~l 339 (450)
T PF01593_consen 277 EDKRRAI-------------ENLPYSSVSKVFLGFDRPFWPPDIDFFGILYSDGF--SP--IGYVSDPSKFPGRPGGGVL 339 (450)
T ss_dssp HHHHHHH-------------HTEEEEEEEEEEEEESSGGGGSTTTESEEEEESST--SS--EEEEEEECCTTSCTTSEEE
T ss_pred ccccccc-------------cccccCcceeEEEeeecccccccccccceecccCc--cc--cccccccccCcccccCCcc
Confidence 5544443 23333333322222211 11111 12222222110 00 00000000011 11 12
Q ss_pred EEEecCC----CCCCChHHHHHHHHHHHHhhcC-----ccceEEEeecCC-CCcccchhhhcchhhHHHHHHh-cCc-CC
Q 037878 332 LFWSYGN----SVDITGPTVTEVAIKTVENMGG-----VIENVVLQRRFK-YFPHVNSKDMKDGFYDRLEYEL-QGQ-RN 399 (2280)
Q Consensus 332 ~~~~~g~----~~~~s~~e~~~~i~~~L~~~~~-----~p~~~~~~~~~~-~~p~~s~~~~~~g~~~~l~~~l-qg~-~~ 399 (2280)
..+..+. ..+++++++.+.+++.|+++.+ .|......+|.. .++..+......+..++....+ +.. ++
T Consensus 340 ~~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~~~~~~~~~~~~~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 419 (450)
T PF01593_consen 340 TSYVGGPDAPEWDDLSDEEILERVLDDLRKILPGASIPDPIDITVTRWSRDPYPRGSYSYFPPGQSSQFRPALRTPIDPG 419 (450)
T ss_dssp EEEEEHHHHHHHTTSCHHHHHHHHHHHHHHHHTTGGGGEESEEEEEECTTSTTTSSSCECHCTTHHHHHHHHHHSCBTTT
T ss_pred eeeeeccccchhcccchhhhHHHHHHHhhhccccccccccccccccccccccccccccccccccccccccccccCCcceE
Confidence 2222222 1568899999999999999855 234445556554 5555545455444442232333 444 69
Q ss_pred ceecccccccc
Q 037878 400 TYYVGGLMAFE 410 (2280)
Q Consensus 400 ~~~~G~~~~~~ 410 (2280)
+|+||.++.-.
T Consensus 420 l~~aG~~~~~~ 430 (450)
T PF01593_consen 420 LYFAGDWTSPG 430 (450)
T ss_dssp EEE-SGGGSSS
T ss_pred EEEeecccCCC
Confidence 99999886654
No 202
>cd04745 LbH_paaY_like paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E. coli paaY gene, which is part of the paa gene cluster responsible for phenylacetic acid degradation. Proteins in this group are expected to adopt the left-handed parallel beta-helix (LbH) structure. They contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Similarity to gamma carbonic anhydrase and Ferripyochelin Binding Protein (FBP) may suggest metal binding capacity.
Probab=99.35 E-value=1.2e-11 Score=136.24 Aligned_cols=93 Identities=17% Similarity=0.317 Sum_probs=74.1
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+.+.||++|+|++++.+ ..+.||++|+||.+++|.+|++||++++||++|+++++..+++++.|.|+|
T Consensus 60 ~~~~Ig~~~~Ig~~~~i------------~~~~Ig~~~~Ig~~~~I~~g~~Ig~~~~Ig~~s~v~~~~~i~~~~~v~G~P 127 (155)
T cd04745 60 QDTVLEENGHIGHGAIL------------HGCTIGRNALVGMNAVVMDGAVIGEESIVGAMAFVKAGTVIPPRSLIAGSP 127 (155)
T ss_pred CCeEEcCCCEECCCcEE------------ECCEECCCCEECCCCEEeCCCEECCCCEECCCCEeCCCCEeCCCCEEecCC
Confidence 45788888888888877 567999999999999999999999999999999999976799999999999
Q ss_pred CceeeecccchhhHHHHHhHHHHHHH
Q 037878 1672 SPVMIKNTMHALDDRIEEMDMKYKKI 1697 (2280)
Q Consensus 1672 a~~~~~~~~~~~~~~le~~~p~~~~~ 1697 (2280)
.+..++......+......++|..+
T Consensus 128 -a~~~~~~~~~~~~~~~~~~~~~~~~ 152 (155)
T cd04745 128 -AKVIRELSDEEVAWKTRGTKEYQQL 152 (155)
T ss_pred -ceEeccCCHHHHHHHHHHHHHHHHh
Confidence 5555555444444444444445444
No 203
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.35 E-value=1.1e-11 Score=163.14 Aligned_cols=89 Identities=18% Similarity=0.278 Sum_probs=69.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.++....+. .+.||+++.|+.++.+.+.. +.....++||+++++|.++.+.+|++||++++||++|
T Consensus 357 ~~i~~~~~i~~~~~ig---~~~ig~~~~Ig~~~~~~~~~----~~~~~~~~igd~~~ig~~~~i~~~~~ig~~~~i~~~~ 429 (456)
T PRK14356 357 AVLGKGAKANHLTYLG---DAEIGAGANIGAGTITCNYD----GVNKHRTVIGEGAFIGSNTALVAPVTIGDGALVGAGS 429 (456)
T ss_pred eEecCCcEeccccccc---CeEECCCCEECCCceeeccc----cccCCCCEECCCcEEcCCCEEeCCcEECCCCEEcCCC
Confidence 3466666665543222 37888888888887663321 1123468999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCC
Q 037878 1654 VAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~P 1671 (2280)
+|.++ +|++++++|..
T Consensus 430 ~v~~~--~~~~~~~~~~~ 445 (456)
T PRK14356 430 VITKD--VPDGSLAIARG 445 (456)
T ss_pred EEecc--CCCCcEEEEec
Confidence 99999 99999999998
No 204
>PRK12461 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=99.34 E-value=1.3e-11 Score=145.77 Aligned_cols=87 Identities=14% Similarity=0.180 Sum_probs=70.8
Q ss_pred CeeCCCceeccCCccc----CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1574 AKIGRYCSIRAINPVS----CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~----~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
..||+++.|..++.+. ..+.++||++++|.+++.|+ +.+.||++|+|++++.+..+++|||+++|
T Consensus 78 v~IG~~~~I~e~vtI~~gt~~g~~t~IG~~~~i~~~~~I~-----------hd~~IG~~v~i~~~~~i~g~v~Igd~a~I 146 (255)
T PRK12461 78 LEIGDRNVIREGVTIHRGTKGGGVTRIGNDNLLMAYSHVA-----------HDCQIGNNVILVNGALLAGHVTVGDRAII 146 (255)
T ss_pred eEECCceEECCccEEecCcccCCcEEEcccceeccCcEEC-----------CCCEECCCcEECCCCccCCceEECCCeEE
Confidence 4577777776654443 23567888888888887775 57899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
|+++.|..+-+|.+++.+.|.-
T Consensus 147 g~~a~V~~~~~IG~~a~Vg~gs 168 (255)
T PRK12461 147 SGNCLVHQFCRIGALAMMAGGS 168 (255)
T ss_pred eCCCEECCCCEECCCcEECCCc
Confidence 9999999998888988887653
No 205
>cd03357 LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).
Probab=99.33 E-value=3.8e-12 Score=142.12 Aligned_cols=99 Identities=19% Similarity=0.201 Sum_probs=86.0
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccC-------CCceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYS-------SIGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~-------~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||+++.|+..+.+.....++||++|.|+++|.|.++... .+....++++||++|+||.+++|++|++||+
T Consensus 62 ~i~IG~~v~I~~~~~i~~~~~i~IG~~v~Ig~~~~I~~~~h~~~~~~~~~~~~~~~~v~IG~~~~Ig~~a~I~~gv~Ig~ 141 (169)
T cd03357 62 NIHIGDNFYANFNCTILDVAPVTIGDNVLIGPNVQIYTAGHPLDPEERNRGLEYAKPITIGDNVWIGGGVIILPGVTIGD 141 (169)
T ss_pred cCEECCCceEcCCEEEeccCcEEECCCCEECCCCEEEeCCCCCChhHccccceecCCcEeCCCEEECCCCEEeCCCEECC
Confidence 689999999998765665678999999999999999754421 1223467899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
||+||++|+|+++ +|++++|.|+||+
T Consensus 142 ~~~VgagavV~~~--vp~~~vv~G~PAk 167 (169)
T cd03357 142 NSVIGAGSVVTKD--IPANVVAAGNPAR 167 (169)
T ss_pred CCEECCCCEEccc--cCCCcEEEccccE
Confidence 9999999999999 9999999999964
No 206
>PLN02739 serine acetyltransferase
Probab=99.33 E-value=1.1e-11 Score=145.98 Aligned_cols=106 Identities=16% Similarity=0.158 Sum_probs=76.3
Q ss_pred HHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCce---EeeCeEECCCcEEccCCeeCCCcEeCCC
Q 037878 1570 RLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGF---IFGKVEVQDNSVIGSQSLVLPNSVVSRD 1646 (2280)
Q Consensus 1570 R~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~---~~~~~~IG~~~~iG~~~~v~~g~~ig~~ 1646 (2280)
...|+.|+.++.|+....+.....+.||++|.||++|.|..+...++.. .-++++||++|+||.++.|++|++||+|
T Consensus 202 ~~~GidI~p~A~IG~Gv~IdHg~GVVIG~~avIGdnv~I~~gVTIGg~g~~~g~r~p~IGd~V~IGagA~IlG~V~IGd~ 281 (355)
T PLN02739 202 EVFGIDIHPAARIGKGILLDHGTGVVIGETAVIGDRVSILHGVTLGGTGKETGDRHPKIGDGALLGACVTILGNISIGAG 281 (355)
T ss_pred HHhCcccCCCccccCceEEecCCceEECCCCEECCCCEEcCCceeCCcCCcCCCCCcEECCCCEEcCCCEEeCCeEECCC
Confidence 4556666666666655444333456666666666666664333222211 1246899999999999999999999999
Q ss_pred cEEccCccccCCCccCCCcEEecCCCceeeec
Q 037878 1647 VILGALSVAPMHSVLQRGGIYIGSQSPVMIKN 1678 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~ 1678 (2280)
++||++|+|.++ ||++++|.|+||. .++.
T Consensus 282 aiIGAGSVV~kD--VP~~stvvG~PAr-iI~~ 310 (355)
T PLN02739 282 AMVAAGSLVLKD--VPSHSMVAGNPAK-LIGF 310 (355)
T ss_pred CEECCCCEECCC--CCCCcEEEecCCE-Eecc
Confidence 999999999999 9999999999954 3443
No 207
>PRK10092 maltose O-acetyltransferase; Provisional
Probab=99.33 E-value=5e-12 Score=141.29 Aligned_cols=101 Identities=12% Similarity=0.102 Sum_probs=85.7
Q ss_pred cCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC-------CceEeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1572 LGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS-------IGFIFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1572 lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~-------~~~~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
.+..||++++|+.++.+.+...++|||+|+|+.+|.|.+..+.. +....++++||++|+||.+++|.+|++||
T Consensus 72 ~~i~iG~~~~in~~~~i~d~~~I~IGd~v~I~~~v~i~t~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG 151 (183)
T PRK10092 72 YNIFLGNNFYANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPLDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIG 151 (183)
T ss_pred CCcEEcCCcEECCceEEecCceEEECCCCEECCCCEEEcCCCCCChHHccccceecCCeEECCCcEECCCCEECCCCEEC
Confidence 36788888888887767777788999999999999997543321 11234789999999999999999999999
Q ss_pred CCcEEccCccccCCCccCCCcEEecCCCce
Q 037878 1645 RDVILGALSVAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
++++||++|+|.++ +|++++|.|+||+.
T Consensus 152 ~~~vIgagsvV~~d--i~~~~i~~G~PAr~ 179 (183)
T PRK10092 152 DNVVVASGAVVTKD--VPDNVVVGGNPARI 179 (183)
T ss_pred CCCEECCCCEEccc--cCCCcEEEecCcEE
Confidence 99999999999999 99999999999543
No 208
>PLN02612 phytoene desaturase
Probab=99.32 E-value=1.4e-10 Score=154.31 Aligned_cols=46 Identities=35% Similarity=0.410 Sum_probs=42.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEee
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEI 66 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~ 66 (2280)
..++|+|||||++||+||++|+++|+ +|+|+|+++++||++.+++.
T Consensus 92 ~~~~v~iiG~G~~Gl~~a~~l~~~g~-~~~~~e~~~~~gG~~~s~~~ 137 (567)
T PLN02612 92 KPLKVVIAGAGLAGLSTAKYLADAGH-KPILLEARDVLGGKVAAWKD 137 (567)
T ss_pred CCCCEEEECCCHHHHHHHHHHHhcCC-eEEEEecCCCCCCcceeeEc
Confidence 45789999999999999999999998 69999999999999999863
No 209
>cd03351 LbH_UDP-GlcNAc_AT UDP-N-acetylglucosamine O-acyltransferase (UDP-GlcNAc acyltransferase): Proteins in this family catalyze the transfer of (R)-3-hydroxymyristic acid from its acyl carrier protein thioester to UDP-GlcNAc. It is the first enzyme in the lipid A biosynthetic pathway and is also referred to as LpxA. Lipid A is essential for the growth of Escherichia coli and related bacteria. It is also essential for maintaining the integrity of the outer membrane. UDP-GlcNAc acyltransferase is a homotrimer of left-handed parallel beta helix (LbH) subunits. Each subunit contains an N-terminal LbH region with 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal alpha-helical region.
Probab=99.31 E-value=2.6e-11 Score=144.98 Aligned_cols=86 Identities=15% Similarity=0.243 Sum_probs=68.9
Q ss_pred eeCCCceeccCCcccC-----CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1575 KIGRYCSIRAINPVSC-----PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~-----~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.||++|.|+..+.+.. ...++|||+|.|+.++.|. +.++||++|+|++++.+..+++||++++|
T Consensus 79 ~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~-----------~~~~IG~~~~i~~~~~i~~~v~Igd~~~I 147 (254)
T cd03351 79 EIGDNNTIREFVTIHRGTAQGGGVTRIGNNNLLMAYVHVA-----------HDCVIGNNVILANNATLAGHVEIGDYAII 147 (254)
T ss_pred EECCCCEECCccEEeccccCCCCceEECCCCEECCCCEEC-----------CCCEECCCcEECCCccccCCcEeCCCcEE
Confidence 4555555554433321 2579999999999999884 66799999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
|+++.+.++-.|.+++++.|.-
T Consensus 148 g~~~~i~~~v~Ig~~~~Ig~~s 169 (254)
T cd03351 148 GGLSAVHQFCRIGRHAMVGGGS 169 (254)
T ss_pred CCcceECCCcEECCCCEECcCC
Confidence 9999999987788888886664
No 210
>TIGR01852 lipid_A_lpxA acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase. This model describes LpxA, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species, but this protein represents the first step (from UDP-N-acetyl-D-glucosamine) and appears to be conserved in function. Proteins from this family contain many copies of the bacterial transferase hexapeptide repeat (pfam00132).
Probab=99.31 E-value=3.1e-11 Score=144.34 Aligned_cols=87 Identities=17% Similarity=0.201 Sum_probs=72.0
Q ss_pred CeeCCCceeccCCcccC-----CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcE
Q 037878 1574 AKIGRYCSIRAINPVSC-----PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVI 1648 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~-----~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~ 1648 (2280)
..||++|.|+..+.+.. .+.+.||+++.|+.++.|. +.++||++|+|++++.+..+++|||+++
T Consensus 77 v~IG~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~-----------~~~~Ig~~~~i~~~~~i~~~~~Igd~~~ 145 (254)
T TIGR01852 77 LIIGDNNTIREFVTINRGTASGGGVTRIGNNNLLMAYSHIA-----------HDCVVGNHVILANNATLAGHVEVGDYAI 145 (254)
T ss_pred EEECCCCEECCCCEECCcccCCCCcEEECCCCEECCCCEEc-----------cCCEECCCCEECCCCEECCCcEECCCcE
Confidence 45777777766544432 1478999999999998885 6679999999999999999999999999
Q ss_pred EccCccccCCCccCCCcEEecCC
Q 037878 1649 LGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1649 vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
||+++.+..+-.|.+++.+.+..
T Consensus 146 Ig~~~~i~~~v~Ig~~~~Ig~~s 168 (254)
T TIGR01852 146 IGGLVAVHQFVRIGRYAMIGGLS 168 (254)
T ss_pred EeccCEECCCcEECCCCEEeeee
Confidence 99999999988888999887766
No 211
>TIGR02732 zeta_caro_desat carotene 7,8-desaturase. Carotene 7,8-desaturase, also called zeta-carotene desaturase, catalyzes multiple steps in the pathway from geranylgeranyl-PP to all-trans-lycopene in plants and cyanobacteria. A similar enzyme and pathway is found in the green sulfur bacterium Chlorobium tepidum.
Probab=99.30 E-value=7.5e-11 Score=154.15 Aligned_cols=42 Identities=38% Similarity=0.548 Sum_probs=39.9
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEe
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVE 65 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~ 65 (2280)
+|+|||||++||+||++|+++|+ +|+|+|+++++||+++++.
T Consensus 1 ~v~IiG~G~aGl~aA~~L~~~G~-~v~v~E~~~~~GG~~~~~~ 42 (474)
T TIGR02732 1 KVAIVGAGLAGLSTAVELVDAGH-EVDIYESRSFIGGKVGSWV 42 (474)
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-cEEEEEecCCCCceeeeee
Confidence 58999999999999999999998 6999999999999999974
No 212
>PRK05289 UDP-N-acetylglucosamine acyltransferase; Provisional
Probab=99.30 E-value=2.5e-11 Score=145.00 Aligned_cols=86 Identities=14% Similarity=0.188 Sum_probs=70.6
Q ss_pred CeeCCCceeccCCcccC-----CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcE
Q 037878 1574 AKIGRYCSIRAINPVSC-----PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVI 1648 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~-----~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~ 1648 (2280)
+.||+++.|+.++.+.. ...+.||+++.|+.++.|. +.+.||+++.+++++.+..+++|||+++
T Consensus 81 v~IG~~~~I~e~~~I~~~~~~~~~~t~IG~~~~I~~~~~I~-----------h~~~IG~~v~i~~~~~i~g~v~Igd~~~ 149 (262)
T PRK05289 81 LVIGDNNTIREFVTINRGTVQGGGVTRIGDNNLLMAYVHVA-----------HDCVVGNHVILANNATLAGHVEVGDYAI 149 (262)
T ss_pred EEECCCCEECCCeEEecccccCCCeeEECCceEECCCCEEC-----------CeEEECCCeEECCccccccccccCCcEE
Confidence 45666666666544432 2458899999999999885 5679999999999999999999999999
Q ss_pred EccCccccCCCccCCCcEEecC
Q 037878 1649 LGALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1649 vg~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
||.++.|..+-.|.+++.+.+.
T Consensus 150 Ig~~~~i~~~v~Ig~~~~Ig~g 171 (262)
T PRK05289 150 IGGLTAVHQFVRIGAHAMVGGM 171 (262)
T ss_pred EeecceecCCCEECCCCEEeee
Confidence 9999999998778888888665
No 213
>PRK11132 cysE serine acetyltransferase; Provisional
Probab=99.30 E-value=7.5e-12 Score=146.08 Aligned_cols=103 Identities=15% Similarity=0.093 Sum_probs=74.8
Q ss_pred HcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCce---EeeCeEECCCcEEccCCeeCCCcEeCCCc
Q 037878 1571 LLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGF---IFGKVEVQDNSVIGSQSLVLPNSVVSRDV 1647 (2280)
Q Consensus 1571 ~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~---~~~~~~IG~~~~iG~~~~v~~g~~ig~~~ 1647 (2280)
..|+.|+.++.|+....+.....+.||++|.||++|.|..+...++.. ...+++||++|+||+++.|++|++||+|+
T Consensus 139 ~~gidI~~~a~IG~g~~I~h~~givIG~~a~IGdnv~I~~~VtiGg~~~~~~~~~p~IGd~V~IGaga~Ilggv~IG~~a 218 (273)
T PRK11132 139 AFQVDIHPAAKIGRGIMLDHATGIVIGETAVIENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGA 218 (273)
T ss_pred eeeeEecCcceECCCeEEcCCCCeEECCCCEECCCCEEcCCcEEecCcccCCCcCCEECCCcEEcCCCEEcCCCEECCCC
Confidence 345666666666655444433345666666666666664333333211 12457999999999999999999999999
Q ss_pred EEccCccccCCCccCCCcEEecCCCcee
Q 037878 1648 ILGALSVAPMHSVLQRGGIYIGSQSPVM 1675 (2280)
Q Consensus 1648 ~vg~~s~v~~~~~v~~~~~~~G~Pa~~~ 1675 (2280)
+||++|+|.+| +|++++|.|+||+.+
T Consensus 219 ~IGAgSvV~~d--Vp~~~~v~G~PArvi 244 (273)
T PRK11132 219 KIGAGSVVLQP--VPPHTTAAGVPARIV 244 (273)
T ss_pred EECCCCEECcc--cCCCcEEEecCcEEe
Confidence 99999999999 999999999996433
No 214
>KOG4750 consensus Serine O-acetyltransferase [Amino acid transport and metabolism]
Probab=99.29 E-value=2.9e-12 Score=137.02 Aligned_cols=96 Identities=18% Similarity=0.160 Sum_probs=74.4
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGAL 1652 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~ 1652 (2280)
+||||++-.+.+.+-+.+.+-..|||+|.|.+++.++...-. ..-++-+|||||+||++++|++|++||+|++||+|
T Consensus 154 aa~ig~gilldhatgvvigeTAvvg~~vSilH~Vtlggtgk~---~gdrhP~Igd~vliGaGvtILgnV~IGegavIaAG 230 (269)
T KOG4750|consen 154 AAKIGKGILLDHATGVVIGETAVVGDNVSILHPVTLGGTGKG---SGDRHPKIGDNVLIGAGVTILGNVTIGEGAVIAAG 230 (269)
T ss_pred hhhcccceeeccccceeecceeEeccceeeecceeecccccc---ccccCCcccCCeEEccccEEeCCeeECCCcEEecc
Confidence 578888888876654555555666666666666666322111 12245599999999999999999999999999999
Q ss_pred ccccCCCccCCCcEEecCCCc
Q 037878 1653 SVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1653 s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
|+|.|| ||++++.+||||+
T Consensus 231 svV~kD--VP~~~~AvGnPAk 249 (269)
T KOG4750|consen 231 SVVLKD--VPPNTLAVGNPAK 249 (269)
T ss_pred ceEEec--cCCCceecCCchh
Confidence 999999 9999999999953
No 215
>cd03349 LbH_XAT Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.
Probab=99.28 E-value=1.3e-11 Score=132.72 Aligned_cols=105 Identities=15% Similarity=0.120 Sum_probs=85.0
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeec-ccCCC----------------------ceEeeCeEECCCcE
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPG-FYSSI----------------------GFIFGKVEVQDNSV 1630 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~-~~~~~----------------------~~~~~~~~IG~~~~ 1630 (2280)
.+||++++|+..........++||++|.|+.++.|.++ .+... ....++++||++|+
T Consensus 2 ~~iG~~s~i~~~~~~~~~~~i~IG~~~~I~~~v~i~~~~~H~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~ 81 (145)
T cd03349 2 ISVGDYSYGSGPDCDVGGDKLSIGKFCSIAPGVKIGLGGNHPTDWVSTYPFYIFGGEWEDDAKFDDWPSKGDVIIGNDVW 81 (145)
T ss_pred EEEeCceeeCCCCceEeCCCeEECCCCEECCCCEECCCCCCCCCCccccceEeeccccccccccccccccCCcEECCCCE
Confidence 47999999987322333368999999999999999766 22111 11357899999999
Q ss_pred EccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeeccc
Q 037878 1631 IGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTM 1680 (2280)
Q Consensus 1631 iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~ 1680 (2280)
||.++.+++|++||++|+||++|+|+++ +|+++++.|+||..+.+|..
T Consensus 82 Ig~~~~i~~gv~Ig~~~vIgags~V~~~--v~~~~v~~G~Pa~~i~~~~~ 129 (145)
T cd03349 82 IGHGATILPGVTIGDGAVIAAGAVVTKD--VPPYAIVGGNPAKVIRYRFD 129 (145)
T ss_pred ECCCCEEeCCCEECCCCEECCCCEEccc--cCCCeEEEecCCEeehhhCC
Confidence 9999999999999999999999999999 99999999999655444443
No 216
>TIGR03532 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate.
Probab=99.28 E-value=3.9e-11 Score=139.49 Aligned_cols=57 Identities=19% Similarity=0.351 Sum_probs=51.1
Q ss_pred eCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeeccc
Q 037878 1621 GKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTM 1680 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~ 1680 (2280)
..++||++|+||++++|.+|++||++++||++|+|.++ +|+++++.|+||+ .+|+..
T Consensus 159 ~~v~IGd~v~IG~gsvI~~g~~Ig~~~~IgagsvV~~d--i~~~~vv~G~PA~-~i~~~~ 215 (231)
T TIGR03532 159 KPVVIEDNVLIGANAVILEGVRVGKGAVVAAGAIVTED--VPPNTVVAGVPAK-VIKQVD 215 (231)
T ss_pred CCeEECCCcEECCCCEEcCCCEECCCCEECCCCEEccc--cCCCcEEEecCCE-EeccCC
Confidence 46799999999999999999999999999999999999 9999999999954 444443
No 217
>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family. This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.
Probab=99.28 E-value=2.8e-11 Score=138.26 Aligned_cols=58 Identities=16% Similarity=0.280 Sum_probs=52.1
Q ss_pred eeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1620 FGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1620 ~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
.+++.||++|+||.+++|.+|++||++++||++|+|.++ +|+++++.|+||..+.+|.
T Consensus 106 ~~~~~Ig~~~~Ig~~~~I~~gv~Ig~~~~I~~gs~v~~~--i~~~~~~~G~Pa~~~~~~~ 163 (204)
T TIGR03308 106 AKRVTIGHDVWIGHGAVILPGVTIGNGAVIAAGAVVTKD--VAPYTIVAGVPAKLIRRRF 163 (204)
T ss_pred CCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCC--CCCCcEEEecCchHhhhcC
Confidence 467899999999999999999999999999999999999 9999999999965443343
No 218
>PLN02694 serine O-acetyltransferase
Probab=99.28 E-value=1.3e-11 Score=143.08 Aligned_cols=103 Identities=16% Similarity=0.139 Sum_probs=86.1
Q ss_pred HHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCce---EeeCeEECCCcEEccCCeeCCCcEeCCC
Q 037878 1570 RLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGF---IFGKVEVQDNSVIGSQSLVLPNSVVSRD 1646 (2280)
Q Consensus 1570 R~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~---~~~~~~IG~~~~iG~~~~v~~g~~ig~~ 1646 (2280)
+.+|+.|+.++.|+.+..+.....++||++|.||++|.|..+...++.. ..++++||++|+||.++.|++|++||++
T Consensus 157 ~~~gvdI~p~A~IG~gv~Idh~tGVVIGe~a~IGdnv~I~~~VtLGg~g~~~~~r~piIGd~V~IGagA~Ilggi~IGd~ 236 (294)
T PLN02694 157 DVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLGGTGKACGDRHPKIGDGVLIGAGATILGNVKIGEG 236 (294)
T ss_pred cceeEEeCCcceecCCEEEeCCCCeEECCCcEECCCCEEeecceeCCcccccCCCccEECCCeEECCeeEECCCCEECCC
Confidence 4568888888888877555444578999999999999987666555432 3467899999999999999999999999
Q ss_pred cEEccCccccCCCccCCCcEEecCCCce
Q 037878 1647 VILGALSVAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
|+||++|+|+++ ||++++|.|+||..
T Consensus 237 a~IGAgSVV~kd--VP~~~~v~G~PAki 262 (294)
T PLN02694 237 AKIGAGSVVLID--VPPRTTAVGNPARL 262 (294)
T ss_pred CEECCCCEECCc--CCCCcEEEccCcEE
Confidence 999999999999 99999999999643
No 219
>COG1207 GlmU N-acetylglucosamine-1-phosphate uridyltransferase (contains nucleotidyltransferase and I-patch acetyltransferase domains) [Cell envelope biogenesis, outer membrane]
Probab=99.27 E-value=1.6e-11 Score=145.24 Aligned_cols=82 Identities=21% Similarity=0.475 Sum_probs=69.7
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCce-----eecCEEECCCcEECCCCEECCCCEECCCCE
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVL-----SFQPIKIARKVSVGPYAVIQKGSVIGEEAE 1391 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~-----~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ 1391 (2280)
..+||++|.|.+... .-+.++||++|.||++|.|.+..+.++.. ++..-+||++|.||+.+.+.||+.|+++++
T Consensus 268 dv~ig~DvvI~p~v~-l~G~t~ig~~v~iGpg~~i~ds~I~~~a~I~~~S~ie~s~vg~~~~VGPfA~LRPg~~L~~~~h 346 (460)
T COG1207 268 DVEIGRDVVIEPNVI-LEGNTVIGDNVVIGPGSVIKDSVIGDNAVIKAYSVIEGSTVGEGATVGPFARLRPGAVLGADVH 346 (460)
T ss_pred cEEECCceEEecCcE-EeeeEEECCceEECCCcEEEeeEEcCCCEEEecceeeccEecCCcccCCccccCCcCcccCCCe
Confidence 389999999988665 46889999999999999998888776533 456778999999999999999999999999
Q ss_pred ECcCCccC
Q 037878 1392 VAPLQKSE 1399 (2280)
Q Consensus 1392 ig~~s~v~ 1399 (2280)
||+..-++
T Consensus 347 IGNFVEvK 354 (460)
T COG1207 347 IGNFVEVK 354 (460)
T ss_pred EeeeEEEe
Confidence 99977664
No 220
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=99.27 E-value=4e-11 Score=156.63 Aligned_cols=84 Identities=18% Similarity=0.215 Sum_probs=69.7
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGAL 1652 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~ 1652 (2280)
|++||+.+.|++ ++||++|.||.++.+.++.. ....+++||++|+||.++.|.+|++||++++||++
T Consensus 331 ~~~i~~~~~i~d---------~~Ig~~~~ig~~~~~~~~~~----~~~~~~~ig~~~~ig~~~~i~~~~~ig~~~~i~~g 397 (430)
T PRK14359 331 GVKAGHLSYLGD---------CEIDEGTNIGAGTITCNYDG----KKKHKTIIGKNVFIGSDTQLVAPVNIEDNVLIAAG 397 (430)
T ss_pred cccccccccccC---------CEECCCCEECCCceEccccC----ccCcCCEECCCeEEcCCCEEeCCcEECCCCEECCC
Confidence 466777777754 67999999999988754321 11236899999999999999999999999999999
Q ss_pred ccccCCCccCCCcEEecCC
Q 037878 1653 SVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1653 s~v~~~~~v~~~~~~~G~P 1671 (2280)
|+|.+| +|+++.+.|..
T Consensus 398 ~~v~~~--v~~~~~~~~~~ 414 (430)
T PRK14359 398 STVTKD--VPKGSLAISRA 414 (430)
T ss_pred CEEccc--cCCCcEEEecc
Confidence 999999 99999999855
No 221
>COG0110 WbbJ Acetyltransferase (isoleucine patch superfamily) [General function prediction only]
Probab=99.26 E-value=1.3e-11 Score=141.76 Aligned_cols=101 Identities=23% Similarity=0.322 Sum_probs=88.1
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEee--cccCCC------ceEeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIP--GFYSSI------GFIFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~--~~~~~~------~~~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
...||+++.++..+.+.....++||++++++.+|.|.+ |..... ....++++||++||||.+++|+||++||
T Consensus 67 ~~~iG~~~~i~~~~~~~~~~~i~ig~~~~i~~~v~i~~~~h~~~~~~~~~~~~~~~~~v~IG~~vwIG~~a~IlpGV~IG 146 (190)
T COG0110 67 NLTIGDLCFIGVNVVILVGEGITIGDNVVVGPNVTIYTNSHPGDFVTANIGALVGAGPVTIGEDVWIGAGAVILPGVTIG 146 (190)
T ss_pred ceEECCeeEEcCCcEEEecCCeEECCCceECCCcEEecCCCCCChhhcccCCceecCCeEECCCeEEcCccEECCCEEEC
Confidence 46899999999887777889999999999999999987 433221 1235689999999999999999999999
Q ss_pred CCcEEccCccccCCCccCCCcEEecCCCcee
Q 037878 1645 RDVILGALSVAPMHSVLQRGGIYIGSQSPVM 1675 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~ 1675 (2280)
+|++||++|+|++| +|+++++.|+||..+
T Consensus 147 ~gavigagsVVtkd--vp~~~iv~G~Pa~vi 175 (190)
T COG0110 147 EGAVIGAGSVVTKD--VPPYGIVAGNPARVI 175 (190)
T ss_pred CCcEEeeCCEEeCc--cCCCeEEeCCcceEE
Confidence 99999999999999 999999999997533
No 222
>cd04646 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport. Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p27 is part of the pointed-end subcomplex in dynactin that also includes p25, p26, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain the imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.25 E-value=1e-10 Score=129.49 Aligned_cols=67 Identities=19% Similarity=0.326 Sum_probs=60.9
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
+.||+++.|..++.+ ..++|||+|+||.++.|++|++||++++||++|+|.++..+|+++++.|+|+
T Consensus 67 v~IG~~~~i~~~~~i------------~~~~IGd~~~Ig~~a~I~~gv~Ig~~~~IgagsvV~~~~~i~~~~vi~g~~~ 133 (164)
T cd04646 67 MIIGSNNVFEVGCKC------------EALKIGNNNVFESKSFVGKNVIITDGCIIGAGCKLPSSEILPENTVIYGADC 133 (164)
T ss_pred eEECCCCEECCCcEE------------EeeEECCCCEEeCCCEECCCCEECCCCEEeCCeEECCCcEECCCeEEeCCce
Confidence 677777777777777 3489999999999999999999999999999999999988999999999995
No 223
>COG1044 LpxD UDP-3-O-[3-hydroxymyristoyl]
Probab=99.25 E-value=6.7e-11 Score=137.92 Aligned_cols=79 Identities=18% Similarity=0.137 Sum_probs=62.1
Q ss_pred eEECCCcEeCCC----cEEeecccCCCce-EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEe
Q 037878 1594 VTLGAGVHLGDF----SRIIPGFYSSIGF-IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYI 1668 (2280)
Q Consensus 1594 ~~iG~~~~i~~~----~~i~~~~~~~~~~-~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~ 1668 (2280)
++||.++.|..+ +.|+.....+... ..+.|+||++|.|.+++.|...++||++|+||..+.+....+|-+++...
T Consensus 209 VeIGanT~Idrga~~dTvIg~~~kIdN~vqIaHnv~IG~~~~I~~~vgIaGs~~IG~~v~igg~vgI~gh~~IgD~~~I~ 288 (338)
T COG1044 209 VEIGANTTIDRGALDDTVIGEGVKIDNLVQIGHNVRIGEHCIIAGQVGIAGSVKIGKYVIIGGQVGIAGHLEIGDGVTIG 288 (338)
T ss_pred eEEcccceeccccccCceecCCcEEcceeEEccccEECCCcEEeccceeeccceECCeEEECcceeecCceEEcCCCEEe
Confidence 666666666655 5554444444444 45679999999999999999999999999999999999998899999887
Q ss_pred cCCC
Q 037878 1669 GSQS 1672 (2280)
Q Consensus 1669 G~Pa 1672 (2280)
|.-.
T Consensus 289 ~~~~ 292 (338)
T COG1044 289 ARSG 292 (338)
T ss_pred cccc
Confidence 6553
No 224
>TIGR02730 carot_isom carotene isomerase. Members of this family, including sll0033 (crtH) of Synechocystis sp. PCC 6803, catalyze a cis-trans isomerization of carotenes to the all-trans lycopene, a reaction that can also occur non-enzymatically in light through photoisomerization.
Probab=99.24 E-value=4.2e-10 Score=149.09 Aligned_cols=54 Identities=31% Similarity=0.362 Sum_probs=48.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeee
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEM 76 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~ 76 (2280)
.||+|||||++||+||.+|+++|+ +|+|+||++.+||++++++.+++.++.+..
T Consensus 1 ~dvvViGaG~~Gl~aA~~La~~G~-~V~vlE~~~~~GG~~~~~~~~G~~fd~g~~ 54 (493)
T TIGR02730 1 YDAIVIGSGIGGLVTATQLAVKGA-KVLVLERYLIPGGSAGYFEREGYRFDVGAS 54 (493)
T ss_pred CcEEEECCcHHHHHHHHHHHHCCC-cEEEEECCCCCCCceeEeccCCEEEEecch
Confidence 489999999999999999999999 699999999999999999887766665544
No 225
>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition. It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group.
Probab=99.23 E-value=1.3e-10 Score=127.33 Aligned_cols=92 Identities=15% Similarity=0.260 Sum_probs=74.2
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
..+.||+++.|++++.+ ..+.||++|+||.++.+.++++||++++|++++.+.++..++++++|.|+|
T Consensus 60 ~~~~Ig~~~~I~~~~~i------------~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~vg~~~~v~~g~~i~~~~v~~G~p 127 (154)
T cd04650 60 YPTEIGDYVTIGHNAVV------------HGAKVGNYVIVGMGAILLNGAKIGDHVIIGAGAVVTPGKEIPDYSLVLGVP 127 (154)
T ss_pred CCeEECCCCEECCCcEE------------ECcEECCCCEEcCCCEEeCCCEECCCCEECCCCEECCCcEeCCCCEEeccC
Confidence 35889999999999887 456899999999999999999999999999999999877799999999999
Q ss_pred CceeeecccchhhHHHHHhHHHHHH
Q 037878 1672 SPVMIKNTMHALDDRIEEMDMKYKK 1696 (2280)
Q Consensus 1672 a~~~~~~~~~~~~~~le~~~p~~~~ 1696 (2280)
.+..+...+...+.+.+....|-+
T Consensus 128 -a~~~~~~~~~~~~~~~~~~~~~~~ 151 (154)
T cd04650 128 -AKVVRKLTEEEIEWIKKNAEEYVE 151 (154)
T ss_pred -ceEeccCCHHHHHHHHHHHHHHHH
Confidence 555566555444544444444433
No 226
>PLN02487 zeta-carotene desaturase
Probab=99.20 E-value=2e-09 Score=141.28 Aligned_cols=44 Identities=32% Similarity=0.509 Sum_probs=41.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEe
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVE 65 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~ 65 (2280)
+++|+|||||++||+||+.|+++|+ +|+|+|+++++||++++++
T Consensus 75 ~~~v~iiG~G~~Gl~~a~~L~~~g~-~v~i~E~~~~~gG~~~s~~ 118 (569)
T PLN02487 75 KLKVAIIGAGLAGMSTAVELLDQGH-EVDIYESRPFIGGKVGSFV 118 (569)
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eeEEEecCCCCCCceeeee
Confidence 3599999999999999999999998 6999999999999999885
No 227
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.19 E-value=3.8e-10 Score=125.78 Aligned_cols=62 Identities=15% Similarity=0.030 Sum_probs=46.6
Q ss_pred eEECCCcEeCCCcEEeecccCCCce-------------EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccc
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGF-------------IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVA 1655 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~-------------~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v 1655 (2280)
+.||++++|++++.+.++.+..... ....+.||++++||.++.+.+|++||++++|+++|+|
T Consensus 88 siIg~~~~I~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~iIg~~~~ig~~~~i~~g~~ig~~~~i~agsvV 162 (163)
T cd05636 88 SVLGENVNLGAGTITANLRFDDKPVKVRLKGERVDTGRRKLGAIIGDGVKTGINVSLNPGVKIGPGSWVYPGCVV 162 (163)
T ss_pred CEECCCCEECCCcEEcccCcCCcceEEEecCcceecCCcccCcEEcCCeEECCCcEECCCcEECCCCEECCCcEe
Confidence 4567777777777664433322211 1135899999999999999999999999999999987
No 228
>PRK09677 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional
Probab=99.19 E-value=7.5e-11 Score=134.16 Aligned_cols=103 Identities=19% Similarity=0.268 Sum_probs=86.6
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeeccc---------CC-------CceEeeCeEECCCcEEccCCee
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFY---------SS-------IGFIFGKVEVQDNSVIGSQSLV 1637 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~---------~~-------~~~~~~~~~IG~~~~iG~~~~v 1637 (2280)
.+||++|.|+..+.+.....++||++|.|++++.|.++.+ .+ .....++++||++|+||.++.|
T Consensus 66 i~IG~~v~Ig~~v~I~~~~~v~IG~~v~Ig~~v~I~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~v~Ig~~~~ig~~~~i 145 (192)
T PRK09677 66 LFFGDNVQVNDYVHIACIESITIGRDTLIASKVFITDHNHGSFKHSDDFSSPNLPPDMRTLESSAVVIGQRVWIGENVTI 145 (192)
T ss_pred EEECCCCEECCCcEEccCceEEECCCCEECCCeEEECCCCccccccccccccccChhhcccccCCeEEcCCcEECCCCEE
Confidence 6899999998877666667899999999999999976432 11 1224578999999999999999
Q ss_pred CCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1638 LPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1638 ~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
.+|++||++|+||++|+|+++ +|++++|.|+||.. +|+.
T Consensus 146 ~~g~~Ig~~~~Iga~s~v~~~--i~~~~~~~G~Pa~~-ik~~ 184 (192)
T PRK09677 146 LPGVSIGNGCIVGANSVVTKS--IPENTVIAGNPAKI-IKKY 184 (192)
T ss_pred cCCCEECCCCEECCCCEECcc--cCCCcEEEecCCEE-Eecc
Confidence 999999999999999999998 99999999999544 4443
No 229
>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.
Probab=99.17 E-value=2.5e-10 Score=125.62 Aligned_cols=93 Identities=20% Similarity=0.365 Sum_probs=77.7
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+.+.||+++.|+.+|.+ ..+.||++++||.++.+..+++|++++.|++++.+.++..++++++|.|+|
T Consensus 59 ~~~~Ig~~~~I~~~~~i------------~~~~Ig~~~~Ig~~~~v~~~~~ig~~~~ig~~~~v~~~~~i~~~~~~~g~~ 126 (153)
T cd04645 59 YPTIIGDNVTVGHGAVL------------HGCTIGDNCLIGMGAIILDGAVIGKGSIVAAGSLVPPGKVIPPGSLVAGSP 126 (153)
T ss_pred CCeEEcCCcEECCCcEE------------eeeEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCCEeCCCCEEeCCc
Confidence 35889999999999888 347999999999999999999999999999999999987899999999999
Q ss_pred CceeeecccchhhHHHHHhHHHHHHH
Q 037878 1672 SPVMIKNTMHALDDRIEEMDMKYKKI 1697 (2280)
Q Consensus 1672 a~~~~~~~~~~~~~~le~~~p~~~~~ 1697 (2280)
+ +..++........+.+..+.|.++
T Consensus 127 ~-~~~~~~~~~~~~~~~~~~~~~~~~ 151 (153)
T cd04645 127 A-KVVRELTDEEIAELRESAEHYVEL 151 (153)
T ss_pred c-hhcccCCHHHHHHHHHHHHHHhhc
Confidence 4 445666655556666667777654
No 230
>PRK00892 lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; Provisional
Probab=99.17 E-value=5.1e-10 Score=139.88 Aligned_cols=89 Identities=17% Similarity=0.232 Sum_probs=78.8
Q ss_pred CCeeCCCceeccCCcccC--CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc
Q 037878 1573 GAKIGRYCSIRAINPVSC--PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~--~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg 1650 (2280)
++.||++|+|+.++.+.. .+.+.||++|.|++.+.|+ +.++||++|+|++++.|..+++||++++||
T Consensus 203 ~v~Ig~~v~IGa~~~I~~~~~~~t~Ig~~~~i~~~v~I~-----------~~~~IG~~~~i~~~~~i~~~~~iG~~~~ig 271 (343)
T PRK00892 203 RVIIGDDVEIGANTTIDRGALDDTVIGEGVKIDNLVQIA-----------HNVVIGRHTAIAAQVGIAGSTKIGRYCMIG 271 (343)
T ss_pred cEEECCCcEECCCcEEecCccccceeCCCCEEeCCeEEc-----------cCCEECCCcEEeeeeeecCCCEECCceEEC
Confidence 468999999999876643 3578999999999999885 678999999999999999999999999999
Q ss_pred cCccccCCCccCCCcEEecCCC
Q 037878 1651 ALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1651 ~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
.++.|..+-+|.+++.+.|.-.
T Consensus 272 ~~~~i~~~~~ig~~~~i~~~s~ 293 (343)
T PRK00892 272 GQVGIAGHLEIGDGVTITAMSG 293 (343)
T ss_pred CCCEEcCCCEECCCCEEecCCe
Confidence 9999999988999999988753
No 231
>TIGR02304 aden_form_hyp probable adenylate-forming enzyme. Members of this family form a distinct clade within a larger family of proteins that also includes coenzyme F390 synthetase, an enzyme known in Methanobacterium thermoautotrophicum and a few other methanogenic archaea. That enzyme adenylates coenzyme F420 to F390, a reversible process, during oxygen stress. Other informative homologies include domains of the non-ribosomal peptide synthetases involved in activation by adenylation. The family defined by this model is likely to be of an adenylate-forming enzyme related to but distinct from coenzyme F390 synthetase.
Probab=99.16 E-value=6.6e-09 Score=131.96 Aligned_cols=236 Identities=12% Similarity=0.110 Sum_probs=144.2
Q ss_pred eEEEEeccCCCCCceEEEEchHHHHHHHHHH-HHH--cCCCCCcEEEEE--cCchhhhhHHHHHHHHHHccceEEEeCcc
Q 037878 637 LCFLQFTSGSTGDAKGVMITHGGLIHNVKLM-RKR--YKSTSKTVLVSW--LPQYHDMGLIGGLFTAMVGGSTAILFSPL 711 (2280)
Q Consensus 637 ~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~-~~~--~~~~~~d~~l~~--~pl~h~~gl~~~i~~~L~~G~~~vl~~~~ 711 (2280)
-.++.-||||||+|=.+.++........... ... .+...++++..+ .+. + ++..+... .+-++..
T Consensus 101 ~~~v~~TSGSSG~p~~f~~~~~~~~~~~a~~~~~~~~~g~~~g~r~a~~~~~~~-~-------ly~~~~~~--~~~~~~~ 170 (430)
T TIGR02304 101 NISVGLSSGTSGRRGLFVVSPEEQQMWAGGILAKVLPDGLFAKHRIAFFLRADN-N-------LYQSVNNR--WISLDFF 170 (430)
T ss_pred cEEEEECCCCCCCceEEEECHHHHHHHHHHHHhhhCccccccCCcEEEEEccCh-h-------HHHHHHhc--cceeeec
Confidence 4567779999999999999988753332221 111 234444555443 221 1 11112221 1101122
Q ss_pred ccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCc
Q 037878 712 TFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQG 791 (2280)
Q Consensus 712 ~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~ 791 (2280)
.+..+...+++.|++++++++.++|+.+..+++...... .+ .+++.++++||+++++..+.+.+.+ ++
T Consensus 171 ~l~~~~~~~l~~L~~~~P~~L~g~pS~l~~LA~~~~~~~-----l~-~~~k~ii~~~E~l~~~~r~~Ie~~f------g~ 238 (430)
T TIGR02304 171 DLLAPFQAHIKRLNQRKPSIIVAPPSVLRALALEVMEGE-----LT-IKPKKVISVAEVLEPQDRELIRNVF------KN 238 (430)
T ss_pred CCCcCHHHHHHHHHHhCCCEEEEcHHHHHHHHHHHHhcC-----CC-CCceEEEEccCCCCHHHHHHHHHHh------CC
Confidence 223467789999999999999999999999988765533 12 3689999999999999888888775 57
Q ss_pred ccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCc--eEEEEcCCCCcccCCCCCeeEEEEcCCCccccc
Q 037878 792 VMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDV--DIRIVNPETSEEIGEPGKEGEVWISSPSAGIGY 869 (2280)
Q Consensus 792 ~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~--~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY 869 (2280)
++++.||.|| +.+++.... + ...+. -... |..++|+++ .++.+|.+ +
T Consensus 239 ~V~~~YG~tE-g~la~eC~~-g-~lHl~-------------ed~~~vE~~ivD~~~---------~~~~ViT~------L 287 (430)
T TIGR02304 239 TVHQIYQATE-GFLASTCRC-G-TLHLN-------------EDLVHIEKQYLDEHK---------RFVPIITD------F 287 (430)
T ss_pred CeeEccCCch-hheEEecCC-C-CEEEc-------------cccEEEEeeEECCCC---------ceEEEEec------C
Confidence 8999999999 443322111 1 11110 0122 333778653 13334443 3
Q ss_pred CCCchhhHHHHhhhccCCCCCceeecCcEEEEE-C----C----eE-EEEecCCCeEEE---CCe--eechHHHHHHHHh
Q 037878 870 WGREELSQITFRNELQNNRGRKYTRTGDLGRII-D----G----KF-FITGRIKDLIIV---AGR--NVYSADVEKTVES 934 (2280)
Q Consensus 870 ~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-d----G----~l-~~~GR~dd~IKi---~G~--rI~~~EIE~~L~~ 934 (2280)
.|. .+ |. -=|+|||++++. + | .| .+.||.||++++ +|. +|.|..++.++..
T Consensus 288 ~n~------~~---Pl-----IRYrtGD~~~~~~~~C~CGr~~~~i~~I~GR~dD~l~~~~~~G~~v~v~p~~~~~~i~~ 353 (430)
T TIGR02304 288 TRT------TQ---PI-----VRYRLNDILVESEQPCSCGSATMAIERIEGRQDDIFQLITRSGDEQTVFPDFIRRVILF 353 (430)
T ss_pred CCc------cc---eE-----EeeeCCCEEEeCCCCCCCCCcccccCCccCccCCEEEEecCCCCeEEeCHHHHHHHHHh
Confidence 221 10 10 127999999883 2 3 24 388999999997 354 4599999988554
Q ss_pred -ccCCc
Q 037878 935 -STEHI 939 (2280)
Q Consensus 935 -~p~v~ 939 (2280)
.+++.
T Consensus 354 ~~~~i~ 359 (430)
T TIGR02304 354 TLPLIV 359 (430)
T ss_pred cCCCCc
Confidence 45553
No 232
>cd03350 LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (also called THP succinyltransferase): THDP N-succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA. It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is homotrimeric and each subunit contains an N-terminal region with alpha helices and hairpin loops, as well as a C-terminal region with a left-handed parallel alpha-helix (LbH) structural motif encoded by hexapeptide repeat motifs.
Probab=99.16 E-value=4.2e-10 Score=121.58 Aligned_cols=63 Identities=14% Similarity=0.190 Sum_probs=57.1
Q ss_pred ceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCC-cEEecCC
Q 037878 1593 QVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRG-GIYIGSQ 1671 (2280)
Q Consensus 1593 ~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~-~~~~G~P 1671 (2280)
.+.||++|+|+.++.|. ..++||+++.||.+++|.++++|+++ |++|+|.|| +|++ +.+.|+|
T Consensus 75 ~v~Ig~~~~Ig~~a~I~-----------~gv~Ig~~~~Ig~g~~V~~~~~I~~~---~~~~~v~~~--~~~~~~~~~g~~ 138 (139)
T cd03350 75 PVIIEDDVFIGANCEVV-----------EGVIVGKGAVLAAGVVLTQSTPIYDR---ETGEIYYGR--VPPGSVVVAGSL 138 (139)
T ss_pred CeEECCCCEECCCCEEC-----------CCCEECCCCEEcCCCEEcCCeEeccc---CcccEEecc--cCCCCEEecccC
Confidence 47788888888888874 56789999999999999999999999 999999999 9999 8899999
No 233
>TIGR01853 lipid_A_lpxD UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase. This model describes LpxD, an enzyme for the biosynthesis of lipid A, a component oflipopolysaccharide (LPS) in the outer membrane outer leaflet of most Gram-negative bacteria. Some differences are found between lipid A of different species. This protein represents the third step from UDP-N-acetyl-D-glucosamine. The group added at this step generally is 14:0(3-OH) (myristate) but may vary; in Aquifex it appears to be 16:0(3-OH) (palmitate).
Probab=99.15 E-value=6.5e-10 Score=136.30 Aligned_cols=52 Identities=15% Similarity=0.154 Sum_probs=45.5
Q ss_pred eeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1620 FGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1620 ~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
.+.++||++|.|++++.+..+++||++++||.++.|..+-.|.+++...|.-
T Consensus 233 ~~~v~IG~~~~I~~~~~iag~~~IG~~~~ig~~~~I~~~v~Ig~~~~ig~~s 284 (324)
T TIGR01853 233 AHNCRIGENCIIVAQVGIAGSTKIGRNVIIGGQVGVAGHLEIGDNVTIGAKS 284 (324)
T ss_pred CCCCEECCCcEECCcceEcCccEECCCeEEccccccccCCEECCCCEEccCC
Confidence 3567889999999999999999999999999999999888889998887664
No 234
>PRK09527 lacA galactoside O-acetyltransferase; Reviewed
Probab=99.15 E-value=4.6e-11 Score=134.98 Aligned_cols=108 Identities=19% Similarity=0.278 Sum_probs=89.0
Q ss_pred HhhhcCCcchHHHHHHHhcCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--eccc---CCCcceEeeeEE
Q 037878 2166 FVEMTSGSFLFVAWMKLMGAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYE---GDGGKVKFGKIR 2240 (2280)
Q Consensus 2166 ~~~~~~~~~~~~~~~r~~g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~---~~~~~~~~~~~~ 2240 (2280)
|.+...++.+.+.+...+|.+|-+|++|+|+.++.+.+...|+|| |+|.|+++|.|.| |..+ +.++.+...+|+
T Consensus 55 ~~~ig~~~~I~~~~~~~~g~ni~IG~~v~In~~~~I~d~~~I~IG-d~v~Ig~~v~I~~~~h~~~~~~r~~g~~~~~pi~ 133 (203)
T PRK09527 55 FATVGENAWVEPPVYFSYGSNIHIGRNFYANFNLTIVDDYTVTIG-DNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPIT 133 (203)
T ss_pred hhhcCCCcEEcCCEEEeeCCCcEEcCCcEECCCcEEecCCCEEEC-CCCEECCCCEEEeCCCCCChhhccccccccCCeE
Confidence 445555555666555556655557799999999888888899999 9999999999997 5443 234566788999
Q ss_pred EccCeEEccceeEcCCcEeCCCceecccceeecc
Q 037878 2241 IGEGGFVGSRAAAMPGVRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2241 ~~~~~~~g~~~~~~~g~~~~~~~~~~~~s~~~~~ 2274 (2280)
||++||||++|+|++|++||++++|+++|+|+|.
T Consensus 134 IGd~v~IG~~~~I~~gv~IG~~~vIgagsvV~kd 167 (203)
T PRK09527 134 IGNNVWIGSHVVINPGVTIGDNSVIGAGSVVTKD 167 (203)
T ss_pred ECCCcEECCCCEEcCCCEECCCCEECCCCEEccc
Confidence 9999999999999999999999999999999984
No 235
>TIGR01172 cysE serine O-acetyltransferase. Cysteine biosynthesis
Probab=99.15 E-value=1.8e-10 Score=127.11 Aligned_cols=97 Identities=20% Similarity=0.136 Sum_probs=70.0
Q ss_pred HcCCeeCCCceeccCCcccCC------cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1571 LLGAKIGRYCSIRAINPVSCP------QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1571 ~lG~~IG~~~~i~~~~~~~~~------~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
..|+.|+.+++|+....+..+ +.++||++|+|++++.|+...... ....++||++|+||.++.|.++++||
T Consensus 59 ~~~~~I~~~~~Ig~~~~i~~~~g~~Ig~~~~IG~~~~I~~~v~ig~~~~~~---~~~~~~Ig~~v~Ig~~a~I~~~v~IG 135 (162)
T TIGR01172 59 LTGVDIHPGARIGRGVFIDHGTGVVIGETAVIGDDVTIYHGVTLGGTGKEK---GKRHPTVGEGVMIGAGAKVLGNIEVG 135 (162)
T ss_pred eeCeEeCCCCEECCCeEECCCCeEEECCCCEECCCCEEcCCCEECCCcccc---CCcCCEECCCcEEcCCCEEECCcEEC
Confidence 345666666666655433323 334555555555555554321111 13457999999999999999999999
Q ss_pred CCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1645 RDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
++++||++|+|.+| +|++++|.|+||
T Consensus 136 ~~~~Iga~s~V~~d--vp~~~~~~G~Pa 161 (162)
T TIGR01172 136 ENAKIGANSVVLKD--VPPGATVVGVPA 161 (162)
T ss_pred CCCEECCCCEECCC--CCCCCEEEeecC
Confidence 99999999999999 999999999995
No 236
>PRK10092 maltose O-acetyltransferase; Provisional
Probab=99.13 E-value=5.1e-11 Score=133.24 Aligned_cols=102 Identities=19% Similarity=0.267 Sum_probs=85.9
Q ss_pred CcchHHHHHHHhcCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccCC---CcceEeeeEEEccCeE
Q 037878 2172 GSFLFVAWMKLMGAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEGD---GGKVKFGKIRIGEGGF 2246 (2280)
Q Consensus 2172 ~~~~~~~~~r~~g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~~---~~~~~~~~~~~~~~~~ 2246 (2280)
+..+.+.+...+|.+|-+|++++++.++++.+...|+|| |+|.|+++|.++| |..... .+....++|+||++||
T Consensus 59 ~~~i~~~~~~~~g~~i~iG~~~~in~~~~i~d~~~I~IG-d~v~I~~~v~i~t~~h~~~~~~~~~~~~~~~~v~IGd~v~ 137 (183)
T PRK10092 59 EAYIEPTFRCDYGYNIFLGNNFYANFDCVMLDVCPIRIG-DNCMLAPGVHIYTATHPLDPVARNSGAELGKPVTIGNNVW 137 (183)
T ss_pred CEEEeCCEEEeecCCcEEcCCcEECCceEEecCceEEEC-CCCEECCCCEEEcCCCCCChHHccccceecCCeEECCCcE
Confidence 444555555566777777799999999999999999999 9999999999998 655432 2334468999999999
Q ss_pred EccceeEcCCcEeCCCceecccceeecc
Q 037878 2247 VGSRAAAMPGVRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2247 ~g~~~~~~~g~~~~~~~~~~~~s~~~~~ 2274 (2280)
||++|+|+||++||++++|+++|+|+|.
T Consensus 138 IG~~a~I~~gv~IG~~~vIgagsvV~~d 165 (183)
T PRK10092 138 IGGRAVINPGVTIGDNVVVASGAVVTKD 165 (183)
T ss_pred ECCCCEECCCCEECCCCEECCCCEEccc
Confidence 9999999999999999999999999984
No 237
>TIGR03467 HpnE squalene-associated FAD-dependent desaturase. The sequences in this family are members of the pfam01593 superfamily of flavin-containing amine oxidases which include the phytoene desaturases. These sequences also include a FAD-dependent oxidoreductase domain, pfam01266. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of squalene, the condensation product of the polyisoprenoid farnesyl pyrophosphate. This gene and its association with hopene biosynthesis in Zymomonas mobilis has been noted in the literature where the gene symbol hpnE was assigned. This gene is also found in contexts where the downstream conversion of squalene to hopenes is not evidence. The precise nature of the reaction catalyzed by this enzyme is unknown at this time.
Probab=99.12 E-value=1.3e-09 Score=142.54 Aligned_cols=67 Identities=16% Similarity=0.212 Sum_probs=50.8
Q ss_pred CeEEEEcCCHHHHHHH-HHhHC---CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCccccc
Q 037878 179 GKIRRFKGGYTSLWQK-LSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKN 248 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~-la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~ 248 (2280)
..++.++||+++++.+ +++.+ |.+|++|++|++|+.+++++.+.+. .+| +++.||+||+|+|+++..
T Consensus 186 ~~~~~~~gG~~~~~~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~~~~~~-~~g--~~~~~d~vi~a~p~~~~~ 256 (419)
T TIGR03467 186 SDLLLPRVPLSELFPEPARRWLDSRGGEVRLGTRVRSIEANAGGIRALVL-SGG--ETLPADAVVLAVPPRHAA 256 (419)
T ss_pred ceeeeeCCCHHHHHHHHHHHHHHHcCCEEEcCCeeeEEEEcCCcceEEEe-cCC--ccccCCEEEEcCCHHHHH
Confidence 3466788999887655 66544 8899999999999998887654444 355 468999999997766443
No 238
>PRK10191 putative acyl transferase; Provisional
Probab=99.11 E-value=2.5e-10 Score=121.92 Aligned_cols=95 Identities=19% Similarity=0.213 Sum_probs=77.3
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|+..........++|||+|.|+++|.|+.+. ....+.++|||+|+||+++.+.++++||++++||++|
T Consensus 48 a~Ig~~~~I~~g~~i~I~~~~~IGd~~~I~h~v~IG~~~----~~~~~~~~IGd~~~Ig~~~~I~~~v~IG~~~~Igags 123 (146)
T PRK10191 48 ATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG----ADNMACPHIGNGVELGANVIILGDITIGNNVTVGAGS 123 (146)
T ss_pred CEECCCeEECCCCeEEECCCcEECCCCEECCCCEECCCC----cCCCCCCEECCCcEEcCCCEEeCCCEECCCCEECCCC
Confidence 677777777764334445677888888888888886432 1223567999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
+|.++ +|+++++.|+||..
T Consensus 124 ~V~~d--v~~~~~v~G~pA~~ 142 (146)
T PRK10191 124 VVLDS--VPDNALVVGEKARV 142 (146)
T ss_pred EECCc--cCCCcEEEccCcEE
Confidence 99999 99999999999643
No 239
>PLN02357 serine acetyltransferase
Probab=99.11 E-value=4.2e-10 Score=134.48 Aligned_cols=104 Identities=15% Similarity=0.125 Sum_probs=73.5
Q ss_pred HcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCc---eEeeCeEECCCcEEccCCeeCCCcEeCCCc
Q 037878 1571 LLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIG---FIFGKVEVQDNSVIGSQSLVLPNSVVSRDV 1647 (2280)
Q Consensus 1571 ~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~---~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~ 1647 (2280)
.+|+.|+.++.|+.+..+....-+.||+++.||++|.|..+...++. ...++++||++|+||.++.|.+|++||+++
T Consensus 224 ~f~vdI~p~a~IG~Gv~Idh~~giVIGe~avIGdnV~I~~gVtIGg~g~~~g~~~piIGd~V~IGagA~IlggV~IGdga 303 (360)
T PLN02357 224 AFAVDIHPGAKIGQGILLDHATGVVIGETAVVGNNVSILHNVTLGGTGKQSGDRHPKIGDGVLIGAGTCILGNITIGEGA 303 (360)
T ss_pred HhceeeCCCCEECCCeEECCCCceEECCCCEECCCCEEeCCceecCccccCCccCceeCCCeEECCceEEECCeEECCCC
Confidence 45666666666665433332223555555555555555333222221 123568999999999999999999999999
Q ss_pred EEccCccccCCCccCCCcEEecCCCceee
Q 037878 1648 ILGALSVAPMHSVLQRGGIYIGSQSPVMI 1676 (2280)
Q Consensus 1648 ~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~ 1676 (2280)
+||++|+|.++ ||+++++.|+||+.+-
T Consensus 304 ~IGAgSVV~~d--VP~~~~v~G~PArvv~ 330 (360)
T PLN02357 304 KIGAGSVVLKD--VPPRTTAVGNPARLIG 330 (360)
T ss_pred EECCCCEECcc--cCCCcEEECCCeEEEc
Confidence 99999999999 9999999999965443
No 240
>cd05825 LbH_wcaF_like wcaF-like: This group is composed of the protein product of the E. coli wcaF gene and similar proteins. WcaF is part of the gene cluster responsible for the biosynthesis of the extracellular polysaccharide colanic acid. The wcaF protein is predicted to contain a left-handed parallel beta-helix (LbH) domain encoded by imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Many are trimeric in their active forms.
Probab=99.10 E-value=1.9e-10 Score=118.06 Aligned_cols=86 Identities=23% Similarity=0.380 Sum_probs=79.2
Q ss_pred CeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccCCCcceEeeeEEEccCeEEccceeEcCCcEeCCC
Q 037878 2185 AEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEGDGGKVKFGKIRIGEGGFVGSRAAAMPGVRIENG 2262 (2280)
Q Consensus 2185 ~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~ 2262 (2280)
.+|| ++++|+.++.|.+...|+|| |+|.|+.+|.+++ |.+...++.+...+++||++||||+++++++|++||++
T Consensus 4 i~iG--~~~~I~~~~~i~~~~~i~IG-~~~~I~~~~~I~~~~h~~~~~~~~~~~~~v~Ig~~~~ig~~~~i~~g~~Ig~~ 80 (107)
T cd05825 4 LTIG--DNSWIGEGVWIYNLAPVTIG-SDACISQGAYLCTGSHDYRSPAFPLITAPIVIGDGAWVAAEAFVGPGVTIGEG 80 (107)
T ss_pred EEEC--CCCEECCCCEEeeCCceEEC-CCCEECCCeEeecCCCCCCcCccceecCCEEECCCCEECCCCEECCCCEECCC
Confidence 3555 99999999999888999999 9999999999997 77776667888999999999999999999999999999
Q ss_pred ceecccceeec
Q 037878 2263 GSLSSLSLAMK 2273 (2280)
Q Consensus 2263 ~~~~~~s~~~~ 2273 (2280)
++|+++|+|+|
T Consensus 81 ~~i~~gs~v~~ 91 (107)
T cd05825 81 AVVGARSVVVR 91 (107)
T ss_pred CEECCCCEEeC
Confidence 99999999997
No 241
>PTZ00363 rab-GDP dissociation inhibitor; Provisional
Probab=99.07 E-value=1.7e-09 Score=138.05 Aligned_cols=49 Identities=16% Similarity=0.193 Sum_probs=45.2
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeec
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIE 67 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~ 67 (2280)
|+++.||+|||+|++|+.+|..|+++|+ +|+++|++++.||+.+|.+.+
T Consensus 1 m~~~~DViViGtGL~e~ilAa~Ls~~Gk-kVLhlD~n~~yGG~~as~~l~ 49 (443)
T PTZ00363 1 MDETYDVIVCGTGLKECILSGLLSVNGK-KVLHMDRNPYYGGESASLNLT 49 (443)
T ss_pred CCCcceEEEECCChHHHHHHhhhhhCCC-EEEEecCCCCcCcccccccHH
Confidence 5678999999999999999999999998 699999999999999998543
No 242
>COG0110 WbbJ Acetyltransferase (isoleucine patch superfamily) [General function prediction only]
Probab=99.07 E-value=2.1e-10 Score=131.83 Aligned_cols=93 Identities=23% Similarity=0.374 Sum_probs=80.9
Q ss_pred HHhc-CeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccCCCc----ceEeeeEEEccCeEEccceeE
Q 037878 2181 KLMG-AEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEGDGG----KVKFGKIRIGEGGFVGSRAAA 2253 (2280)
Q Consensus 2181 r~~g-~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~~~~----~~~~~~~~~~~~~~~g~~~~~ 2253 (2280)
..+| .++.+|+.++++..+-+.....++|| ++++++++|.++| |......+ .....+|+||++||||++|+|
T Consensus 61 ~~~~~~~~~iG~~~~i~~~~~~~~~~~i~ig-~~~~i~~~v~i~~~~h~~~~~~~~~~~~~~~~~v~IG~~vwIG~~a~I 139 (190)
T COG0110 61 IDLGEKNLTIGDLCFIGVNVVILVGEGITIG-DNVVVGPNVTIYTNSHPGDFVTANIGALVGAGPVTIGEDVWIGAGAVI 139 (190)
T ss_pred EecCCcceEECCeeEEcCCcEEEecCCeEEC-CCceECCCcEEecCCCCCChhhcccCCceecCCeEECCCeEEcCccEE
Confidence 3335 66667799999999999999999999 9999999999999 87754222 333668999999999999999
Q ss_pred cCCcEeCCCceecccceeecc
Q 037878 2254 MPGVRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2254 ~~g~~~~~~~~~~~~s~~~~~ 2274 (2280)
+||++||+||+||++|+|+|.
T Consensus 140 lpGV~IG~gavigagsVVtkd 160 (190)
T COG0110 140 LPGVTIGEGAVIGAGSVVTKD 160 (190)
T ss_pred CCCEEECCCcEEeeCCEEeCc
Confidence 999999999999999999994
No 243
>cd00710 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.
Probab=99.06 E-value=2.7e-09 Score=119.03 Aligned_cols=75 Identities=24% Similarity=0.217 Sum_probs=57.3
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.|+..+.+ ...+.||++|+|+.+|.| ..++||++|+||+++.| .+++|++++++++++
T Consensus 65 v~Ig~~~~I~~~~~i--~g~~~Ig~~~~Ig~~~~I------------~~~~Ig~~~~Ig~~s~i-~~~~i~~~~~v~~~~ 129 (167)
T cd00710 65 VWIGKNVSIAHGAIV--HGPAYIGDNCFIGFRSVV------------FNAKVGDNCVIGHNAVV-DGVEIPPGRYVPAGA 129 (167)
T ss_pred EEECCCceECCCCEE--eCCEEECCCCEECCCCEE------------ECCEECCCCEEcCCCEE-eCCEeCCCCEECCCC
Confidence 346666666654322 234889999999998888 35789999999999988 478999999999999
Q ss_pred cccCCCccCCCc
Q 037878 1654 VAPMHSVLQRGG 1665 (2280)
Q Consensus 1654 ~v~~~~~v~~~~ 1665 (2280)
++.++ .+.+.
T Consensus 130 ~v~~~--~~~~~ 139 (167)
T cd00710 130 VITSQ--TQADA 139 (167)
T ss_pred EEcCC--Ccccc
Confidence 98877 55533
No 244
>cd03359 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport. Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p25 is part of the pointed-end subcomplex in dynactin that also includes p26, p27, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.05 E-value=3.6e-09 Score=117.25 Aligned_cols=76 Identities=14% Similarity=0.222 Sum_probs=62.1
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
++|||++.|++++.+ ..+.||+++.||.++.|.+++.|++++.|+.+++|..+..++++++|.|+| .
T Consensus 73 v~Ig~~~~Ig~~~~i------------~~~~Ig~~v~Ig~~~~Ig~~~~I~~~~~i~~g~~V~~~~~i~~~~vv~g~p-a 139 (161)
T cd03359 73 LHIGDYVFIGENCVV------------NAAQIGSYVHIGKNCVIGRRCIIKDCVKILDGTVVPPDTVIPPYSVVSGRP-A 139 (161)
T ss_pred eEECCccEECCCCEE------------EeeEEcCCcEECCCCEEcCCCEECCCcEECCCCEECCCCEeCCCCEEeccc-c
Confidence 567777777777777 346788888998889999999999999999999999888899999999999 4
Q ss_pred eeeecccch
Q 037878 1674 VMIKNTMHA 1682 (2280)
Q Consensus 1674 ~~~~~~~~~ 1682 (2280)
+.++.....
T Consensus 140 ~~i~~~~~~ 148 (161)
T cd03359 140 RFIGELPEC 148 (161)
T ss_pred EEEEecchh
Confidence 555555433
No 245
>COG2081 Predicted flavoproteins [General function prediction only]
Probab=99.05 E-value=1.2e-09 Score=130.41 Aligned_cols=159 Identities=22% Similarity=0.325 Sum_probs=100.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecCCCCceeeccccc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQDIKVAD 98 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (2280)
|+.+||+|||||+|||-||..++++|+ +|+|||+.+.+|=++.-- +.| .-.+.+.....
T Consensus 1 ~~~~dviIIGgGpAGlMaA~~aa~~G~-~V~lid~~~k~GrKil~s---GgG-----------------rCN~Tn~~~~~ 59 (408)
T COG2081 1 MERFDVIIIGGGPAGLMAAISAAKAGR-RVLLIDKGPKLGRKILMS---GGG-----------------RCNFTNSEAPD 59 (408)
T ss_pred CCcceEEEECCCHHHHHHHHHHhhcCC-EEEEEecCccccceeEec---CCC-----------------CccccccccHH
Confidence 356899999999999999999999998 699999999998654331 111 00011111111
Q ss_pred chhhhhccccccchhhhhccccchhhHHHhhhhhhhHHHHHcCCCCcchhhhhhhhcccccccccccHHHHHHHHhhccC
Q 037878 99 DYVSVISLTLELQDKAKESGRIGVHAVSDLASDLTPTYLEDRGFKSVPKSVAYGYTASGYGFVQDMPYAYIHEFTRTSMA 178 (2280)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 178 (2280)
.+.... ...+++.......|.......|+.++|..-. ....
T Consensus 60 ~~ls~~----------p~~~~fl~sal~~ft~~d~i~~~e~~Gi~~~-----------------------------e~~~ 100 (408)
T COG2081 60 EFLSRN----------PGNGHFLKSALARFTPEDFIDWVEGLGIALK-----------------------------EEDL 100 (408)
T ss_pred HHHHhC----------CCcchHHHHHHHhCCHHHHHHHHHhcCCeeE-----------------------------EccC
Confidence 011100 0011222233333333333344444443211 1123
Q ss_pred CeEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 179 GKIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
+.+++.....+.+++.+.+++ |++|+++++|.+|++++.+ ..+.+++| ++++||.+|+|
T Consensus 101 Gr~Fp~sdkA~~Iv~~ll~~~~~~gV~i~~~~~v~~v~~~~~~--f~l~t~~g--~~i~~d~lilA 162 (408)
T COG2081 101 GRMFPDSDKASPIVDALLKELEALGVTIRTRSRVSSVEKDDSG--FRLDTSSG--ETVKCDSLILA 162 (408)
T ss_pred ceecCCccchHHHHHHHHHHHHHcCcEEEecceEEeEEecCce--EEEEcCCC--CEEEccEEEEe
Confidence 556666677888999987654 8999999999999998864 47888899 48999999999
No 246
>cd03358 LbH_WxcM_N_like WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.
Probab=99.04 E-value=7.4e-10 Score=116.75 Aligned_cols=97 Identities=19% Similarity=0.305 Sum_probs=80.8
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCce----EeeCeEECCCcEEccCCeeCCCcEeCCCcE
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGF----IFGKVEVQDNSVIGSQSLVLPNSVVSRDVI 1648 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~----~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~ 1648 (2280)
++.||+++.|++.+.+ .+.+.||++|+|++++.+.++.+..... .++.++||++|+||+++.+.+++.||++++
T Consensus 16 ~~~Ig~~~~I~~~~~i--~~~~~Ig~~~~I~~~~~i~~~~~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~v~~~~~ig~~~~ 93 (119)
T cd03358 16 DVKIGDNVKIQSNVSI--YEGVTIEDDVFIGPNVVFTNDLYPRSKIYRKWELKGTTVKRGASIGANATILPGVTIGEYAL 93 (119)
T ss_pred CcEECCCcEECCCcEE--eCCeEECCCcEEcCCeEEecCCCCccccccccccCCcEECCCcEECcCCEEeCCcEECCCCE
Confidence 4678888888776433 4568999999999998886544333222 478899999999999999999999999999
Q ss_pred EccCccccCCCccCCCcEEecCCCc
Q 037878 1649 LGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1649 vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
|++++.++++ +|+++.|.|+||+
T Consensus 94 i~~~~~v~~~--i~~~~~~~G~pa~ 116 (119)
T cd03358 94 VGAGAVVTKD--VPPYALVVGNPAR 116 (119)
T ss_pred EccCCEEeCc--CCCCeEEecCcce
Confidence 9999999998 9999999999953
No 247
>cd04646 LbH_Dynactin_6 Dynactin 6 (or subunit p27): Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport. Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p27 is part of the pointed-end subcomplex in dynactin that also includes p25, p26, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain the imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=99.04 E-value=2.2e-09 Score=118.92 Aligned_cols=72 Identities=11% Similarity=0.137 Sum_probs=62.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.|.....+.. +.|||+|+|+.++.|. +.++||++|+||++++|.++++|+++++++.++
T Consensus 67 v~IG~~~~i~~~~~i~~---~~IGd~~~Ig~~a~I~-----------~gv~Ig~~~~IgagsvV~~~~~i~~~~vi~g~~ 132 (164)
T cd04646 67 MIIGSNNVFEVGCKCEA---LKIGNNNVFESKSFVG-----------KNVIITDGCIIGAGCKLPSSEILPENTVIYGAD 132 (164)
T ss_pred eEECCCCEECCCcEEEe---eEECCCCEEeCCCEEC-----------CCCEECCCCEEeCCeEECCCcEECCCeEEeCCc
Confidence 57888888877644433 9999999999999995 668999999999999999999999999999999
Q ss_pred cccCCC
Q 037878 1654 VAPMHS 1659 (2280)
Q Consensus 1654 ~v~~~~ 1659 (2280)
.+.+..
T Consensus 133 ~~~~~~ 138 (164)
T cd04646 133 CLRRTQ 138 (164)
T ss_pred eEEEec
Confidence 998873
No 248
>cd04647 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.
Probab=99.01 E-value=1.4e-09 Score=112.69 Aligned_cols=98 Identities=21% Similarity=0.284 Sum_probs=84.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC--C------ceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS--I------GFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~--~------~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
.+||++++|+..+.+..++.+.||++|.|+++|.|.++.... . ....++++||++|+||.++.+.+++.||+
T Consensus 2 v~Ig~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~ig~~~~i~~~~~ig~ 81 (109)
T cd04647 2 ISIGDNVYIGPGCVISAGGGITIGDNVLIGPNVTIYDHNHDIDDPERPIEQGVTSAPIVIGDDVWIGANVVILPGVTIGD 81 (109)
T ss_pred eEECCCcEECCCCEEecCCceEECCCCEECCCCEEECCCCCCCccccccccccccCCeEECCCCEECCCCEEcCCCEECC
Confidence 579999999988766656789999999999999997663221 1 23468899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
++.|++++.|.++ +|++++|.|+||+
T Consensus 82 ~~~i~~~~~v~~~--i~~~~i~~g~pa~ 107 (109)
T cd04647 82 GAVVGAGSVVTKD--VPPNSIVAGNPAK 107 (109)
T ss_pred CCEECCCCEEeeE--CCCCCEEEccccE
Confidence 9999999999987 9999999999964
No 249
>TIGR00965 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. The closely related TabB protein of Pseudomonas syringae (pv. tabaci) appears to act in the biosynthesis of tabtoxin rather than lysine. The trusted cutoff is set high enough to exclude this gene. Sequences below trusted also include a version of this enzyme which apparently utilize acetate rather than succinate (EC: 2.3.1.89).
Probab=99.00 E-value=7.2e-09 Score=119.67 Aligned_cols=64 Identities=16% Similarity=0.216 Sum_probs=52.4
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEe-c-
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYI-G- 1669 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~-G- 1669 (2280)
+.+.|||+|+||.+|.|. +.++||++|+||++++|.++++|.+.. +++++.++ ||+++++. |
T Consensus 172 ~~ViIgDnv~IGa~a~I~-----------~GV~IG~gavIGaGavI~~~~~I~~~~---~g~v~~~~--vp~~svv~~g~ 235 (269)
T TIGR00965 172 NPTIIEDNCFIGARSEIV-----------EGVIVEEGSVISMGVFIGQSTKIYDRE---TGEIHYGR--VPAGSVVVSGN 235 (269)
T ss_pred CCeEECCCCEECCCCEEc-----------CCCEECCCCEEeCCCEECCCCEEeccc---CCceeeee--cCCCcEEecCC
Confidence 347777778888888774 566889999999999999999999977 77888877 99999998 4
Q ss_pred CC
Q 037878 1670 SQ 1671 (2280)
Q Consensus 1670 ~P 1671 (2280)
.|
T Consensus 236 ~p 237 (269)
T TIGR00965 236 LP 237 (269)
T ss_pred ee
Confidence 56
No 250
>PF00550 PP-binding: Phosphopantetheine attachment site; InterPro: IPR006163 Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups []. The amino-terminal region of the ACP proteins is well defined and consists of alpha four helices arranged in a right-handed bundle held together by interhelical hydrophobic interactions. The Asp-Ser-Leu (DSL)motif is conserved in all of the ACP sequences, and the 4'-PP prosthetic group is covalently linked via a phosphodiester bond to the serine residue. The DSL sequence is present at the amino terminus of helix II, a domain of the protein referred to as the recognition helix and which is responsible for the interaction of ACPs with the enzymes of type II fatty acid synthesis [].; GO: 0048037 cofactor binding; PDB: 3EJB_E 3EJE_G 1L0I_A 2FHS_C 3EJD_E 2FAE_B 2FAD_B 2FAC_B 2K94_A 1ACP_A ....
Probab=98.99 E-value=7.5e-10 Score=103.28 Aligned_cols=67 Identities=22% Similarity=0.490 Sum_probs=64.1
Q ss_pred HHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHH
Q 037878 1084 EFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFS 1150 (2280)
Q Consensus 1084 ~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l 1150 (2280)
++++++|+++++.++++++++++||++|+|||.+++++..+++++|+.++..++|++||+++|++++
T Consensus 1 e~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~i~~~~~~~~~ti~~l~~~i 67 (67)
T PF00550_consen 1 EQLREIIAEVLGVDPEEIDPDTDFFDLGLDSLDAIELVSELEEEFGIKIPPSDLFEHPTIRDLAEYI 67 (67)
T ss_dssp HHHHHHHHHHHTSSGGCTSTTSBTTTTTSSHHHHHHHHHHHHHHHTSSTTHHHHCTSSSHHHHHHHH
T ss_pred CHHHHHHHHHHCcCHhhCCCCCCHHHhCCchHHHHHHHHHHHHHHcCCCCHHHHHcCCCHHHHHhHC
Confidence 4689999999999888999999999999999999999999999999999999999999999999875
No 251
>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.
Probab=98.98 E-value=3.6e-09 Score=123.11 Aligned_cols=66 Identities=21% Similarity=0.420 Sum_probs=58.3
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
+.||++++|+.++.+. +.++||++|+||.++.+.+++.||++++||++|++.++ +|++++|.|+||
T Consensus 136 ~~ig~~~~i~~~~~i~-----------~~~~ig~~~~ig~~~~v~~~~~i~~~~~i~~~~~v~~~--~~~~~~~~g~pa 201 (201)
T TIGR03570 136 CVIGDYVHIAPGVTLS-----------GGVVIGEGVFIGAGATIIQGVTIGAGAIVGAGAVVTKD--IPDGGVVVGVPA 201 (201)
T ss_pred CEECCCCEECCCCEEe-----------CCcEECCCCEECCCCEEeCCCEECCCCEECCCCEECCc--CCCCCEEEeccC
Confidence 4566667777777764 56789999999999999999999999999999999998 999999999995
No 252
>cd03352 LbH_LpxD UDP-3-O-acyl-glucosamine N-acyltransferase (LpxD): The enzyme catalyzes the transfer of 3-hydroxymyristic acid or 3-hydroxy-arachidic acid, depending on the organism, from the acyl carrier protein (ACP) to UDP-3-O-acyl-glucosamine to produce UDP-2,3-diacyl-GlcNAc. This constitutes the third step in the lipid A biosynthetic pathway in Gram-negative bacteria. LpxD is a homotrimer, with each subunit consisting of a novel combination of an N-terminal uridine-binding domain, a core lipid-binding left-handed parallel beta helix (LbH) domain, and a C-terminal alpha-helical extension. The LbH domain contains 9 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).
Probab=98.96 E-value=1.3e-08 Score=118.52 Aligned_cols=88 Identities=19% Similarity=0.310 Sum_probs=75.7
Q ss_pred CCeeCCCceeccCCcccC--CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc
Q 037878 1573 GAKIGRYCSIRAINPVSC--PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~--~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg 1650 (2280)
+++||+++.|+....+.. .+.+.||+++.|++++.|. +.++||++++|++++.+..+++||+++.||
T Consensus 92 ~v~Ig~~~~Ig~~~~i~~~~~~~~~Ig~~~~i~~~v~I~-----------~~~~ig~~~~i~~~~~i~~~~~Ig~~~~ig 160 (205)
T cd03352 92 GVIIGDDVEIGANTTIDRGALGDTVIGDGTKIDNLVQIA-----------HNVRIGENCLIAAQVGIAGSTTIGDNVIIG 160 (205)
T ss_pred eEEECCCEEECCCCEEeccccCCeEECCCCEECCceEEe-----------CCCEECCCCEECCCCEEccccEECCCeEEc
Confidence 368999999988755432 4578999999999999885 567999999999999999999999999999
Q ss_pred cCccccCCCccCCCcEEecCC
Q 037878 1651 ALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1651 ~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+++.+..+..+.+++.+.+.-
T Consensus 161 ~~~~v~~~~~ig~~~~i~~~s 181 (205)
T cd03352 161 GQVGIAGHLTIGDGVVIGAGS 181 (205)
T ss_pred CCCEEeCCcEECCCCEEcCCC
Confidence 999999998889988876553
No 253
>cd03354 LbH_SAT Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-cysteine. This reaction represents a key metabolic point of regulation for the cysteine biosynthetic pathway due to its feedback inhibition by cysteine. The enzyme is a 175 kDa homohexamer, composed of a dimer of homotrimers. Each subunit contains an N-terminal alpha helical region and a C-terminal left-handed beta-helix (LbH) subdomain with 5 turns, each containing a hexapeptide repeat motif characteristic of the acyltransferase superfamily of enzymes. The trimer interface mainly involves the C-terminal LbH subdomain while the dimer (of trimers) interface is mediated by the N-terminal alpha helical subdomain.
Probab=98.96 E-value=2.3e-09 Score=108.99 Aligned_cols=97 Identities=21% Similarity=0.208 Sum_probs=68.6
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCce---EeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGF---IFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~---~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
|..||+++.|+..+.+..+..+.||+++.|+++|.|..+....... ..+++.||++|+||.++.+.++++||++++|
T Consensus 2 ~~~i~~~~~ig~~~~i~~~~~~~ig~~~~Ig~~~~i~~~~~i~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~i 81 (101)
T cd03354 2 GIDIHPGAKIGPGLFIDHGTGIVIGETAVIGDNCTIYQGVTLGGKGKGGGKRHPTIGDNVVIGAGAKILGNITIGDNVKI 81 (101)
T ss_pred ceEeCCCCEECCCEEECCCCeEEECCCCEECCCCEEcCCCEECCCccCCcCCCCEECCCcEEcCCCEEECcCEECCCCEE
Confidence 4455555555554433332334445555555554443322222211 3678899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+++|.+.++ +|++++|.|+|
T Consensus 82 ~~~~~i~~~--~~~~~~~~G~P 101 (101)
T cd03354 82 GANAVVTKD--VPANSTVVGVP 101 (101)
T ss_pred CCCCEECcc--cCCCCEEEeCC
Confidence 999999998 99999999998
No 254
>cd03357 LbH_MAT_GAT Maltose O-acetyltransferase (MAT) and Galactoside O-acetyltransferase (GAT): MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively at the C6 position of the nonreducing end glucosyl moiety. GAT specifically acetylates galactopyranosides. Furthermore, MAT shows higher affinity toward artificial substrates containing an alkyl or hydrophobic chain as well as a glucosyl unit. Active MAT and GAT are homotrimers, with each subunit consisting of an N-terminal alpha-helical region and a C-terminal left-handed parallel alpha-helix (LbH) subdomain with 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X).
Probab=98.95 E-value=1.5e-09 Score=121.43 Aligned_cols=88 Identities=19% Similarity=0.350 Sum_probs=76.4
Q ss_pred cCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccCC---CcceEeeeEEEccCeEEccceeEcCCcE
Q 037878 2184 GAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEGD---GGKVKFGKIRIGEGGFVGSRAAAMPGVR 2258 (2280)
Q Consensus 2184 g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 2258 (2280)
+++|| ++++|+.++.+.+...|+|| +++.|+++|.|.+ |..... ++....++++||++||||++|+|++|++
T Consensus 62 ~i~IG--~~v~I~~~~~i~~~~~i~IG-~~v~Ig~~~~I~~~~h~~~~~~~~~~~~~~~~v~IG~~~~Ig~~a~I~~gv~ 138 (169)
T cd03357 62 NIHIG--DNFYANFNCTILDVAPVTIG-DNVLIGPNVQIYTAGHPLDPEERNRGLEYAKPITIGDNVWIGGGVIILPGVT 138 (169)
T ss_pred cCEEC--CCceEcCCEEEeccCcEEEC-CCCEECCCCEEEeCCCCCChhHccccceecCCcEeCCCEEECCCCEEeCCCE
Confidence 45666 99999999888888899999 9999999999998 544321 2345678999999999999999999999
Q ss_pred eCCCceecccceeecc
Q 037878 2259 IENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2259 ~~~~~~~~~~s~~~~~ 2274 (2280)
||++++||++|+|++.
T Consensus 139 Ig~~~~VgagavV~~~ 154 (169)
T cd03357 139 IGDNSVIGAGSVVTKD 154 (169)
T ss_pred ECCCCEECCCCEEccc
Confidence 9999999999999984
No 255
>PRK14358 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.94 E-value=8.2e-09 Score=135.40 Aligned_cols=81 Identities=21% Similarity=0.347 Sum_probs=62.3
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~ 1645 (2280)
|++||+++.|+..+.+. .+.|++++.+++.+.+ +.++||++|+||.++++.. +++||+
T Consensus 340 ~~~Ig~~~~Ig~~~~i~---~~~i~~~~~ig~~~~~------------~~~~ig~~~~ig~~~~i~~~~~~~~~~~~Ig~ 404 (481)
T PRK14358 340 GTVLGEGVHIGNFVETK---NARLDAGVKAGHLAYL------------GDVTIGAETNVGAGTIVANFDGVNKHQSKVGA 404 (481)
T ss_pred CcEECCCCEECCCEEEC---CceecCCcccCceEEE------------CCeEEcCCceEcCCEEEeCCCCccCCCCEECC
Confidence 46778888777753322 3556777777666555 6789999999999998863 579999
Q ss_pred CcEEccCccccCCCccCCCcEEe
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYI 1668 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~ 1668 (2280)
+++||++|.+..+..|.+++...
T Consensus 405 ~~~ig~~~~i~~~~~Ig~~~~i~ 427 (481)
T PRK14358 405 GVFIGSNTTLIAPRVVGDAAFIA 427 (481)
T ss_pred CeEEcCCCEEcCCcEECCCCEEC
Confidence 99999999998887788888775
No 256
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.
Probab=98.92 E-value=9.7e-09 Score=118.97 Aligned_cols=65 Identities=20% Similarity=0.403 Sum_probs=56.9
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+.||++|+|+.++.+. +.++||++|+||.++.+.++++||++++||++|+|.++ +|++++|.|+|
T Consensus 133 ~~ig~~~~i~~~~~i~-----------~~~~ig~~~~ig~~~~v~~~~~ig~~~~v~~~~~v~~~--~~~~~~~~g~p 197 (197)
T cd03360 133 CVIGDFVHIAPGVVLS-----------GGVTIGEGAFIGAGATIIQGVTIGAGAIIGAGAVVTKD--VPDGSVVVGNP 197 (197)
T ss_pred CEECCCCEECCCCEEc-----------CCcEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCC--CCCCCEEEecC
Confidence 4466666666666663 45789999999999999999999999999999999999 99999999998
No 257
>PRK11830 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional
Probab=98.90 E-value=2.2e-08 Score=117.31 Aligned_cols=76 Identities=18% Similarity=0.261 Sum_probs=57.4
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEe-cC--
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYI-GS-- 1670 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~-G~-- 1670 (2280)
+.|||+|+||.+|.|. ..++||++|.||+++.|.+++.|+++ .+++++.++ +|+++++. |+
T Consensus 177 viIgDnv~IGa~s~I~-----------~Gv~IGdgavIgag~vV~~gt~I~~~---~~g~v~~g~--vp~~svvv~g~~~ 240 (272)
T PRK11830 177 VIIEDNCFIGARSEVV-----------EGVIVEEGSVLGMGVFLGQSTKIYDR---ETGEVHYGR--VPAGSVVVPGSLP 240 (272)
T ss_pred eEEcCCCEECCCCEEc-----------CCCEECCCCEEcCCCEEcCCeEECcC---CCCcEEeee--cCCCcEEecCccc
Confidence 6777777777777773 45688888888888888888888887 377888877 99999987 74
Q ss_pred --------CCceeeecccchhhH
Q 037878 1671 --------QSPVMIKNTMHALDD 1685 (2280)
Q Consensus 1671 --------Pa~~~~~~~~~~~~~ 1685 (2280)
+++.++++.....+.
T Consensus 241 ~~~~~~~~~~~~i~~~~~~~~~~ 263 (272)
T PRK11830 241 SKDGGYSLYCAVIVKKVDAKTRS 263 (272)
T ss_pred ccCCCcCCcCcEEEEEccccchh
Confidence 346777666544333
No 258
>COG1045 CysE Serine acetyltransferase [Amino acid transport and metabolism]
Probab=98.89 E-value=7.7e-09 Score=111.59 Aligned_cols=94 Identities=21% Similarity=0.299 Sum_probs=72.7
Q ss_pred CCEECCCcEEC-ccccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcC
Q 037878 1317 GAKLGSSVLLD-TVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPL 1395 (2280)
Q Consensus 1317 Ga~Ig~~v~i~-~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~ 1395 (2280)
||+||+++.|+ ..-++.-.-.+|||||.|-.+|+|++-.-+.+ -..-+||+|+.||++|.|+.+.+||||+.||++
T Consensus 73 ~A~IG~g~fIdHg~GvVIgeta~IGddv~I~~gVTLGgtg~~~g---~RhPtIg~~V~IGagAkILG~I~IGd~akIGA~ 149 (194)
T COG1045 73 GAKIGRGLFIDHGTGVVIGETAVIGDDVTIYHGVTLGGTGKESG---KRHPTIGNGVYIGAGAKILGNIEIGDNAKIGAG 149 (194)
T ss_pred CCeECCceEEcCCceEEEcceeEECCCeEEEcceEecCCCCcCC---CCCCccCCCeEECCCCEEEcceEECCCCEECCC
Confidence 67777777773 33333344566777777777777776555444 345689999999999999999999999999999
Q ss_pred Ccc----CCCCccccCCCceeec
Q 037878 1396 QKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1396 s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
|+| |+++.+ .|.|++...
T Consensus 150 sVVlkdVP~~~tv-vGvPArii~ 171 (194)
T COG1045 150 SVVLKDVPPNATV-VGVPARVIG 171 (194)
T ss_pred ceEccCCCCCceE-ecCcceEec
Confidence 999 788888 899999874
No 259
>cd00710 LbH_gamma_CA Gamma carbonic anhydrases (CA): Carbonic anhydrases are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three distinct groups of carbonic anhydrases - alpha, beta and gamma - which show no significant sequence identity or structural similarity. Gamma CAs are homotrimeric enzymes, with each subunit containing a left-handed parallel beta helix (LbH) structural domain.
Probab=98.88 E-value=2.5e-08 Score=111.29 Aligned_cols=80 Identities=23% Similarity=0.272 Sum_probs=62.0
Q ss_pred eeCCCceeccCCccc--CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccC
Q 037878 1575 KIGRYCSIRAINPVS--CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGAL 1652 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~--~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~ 1652 (2280)
.||++|.|+..+.+. ..+.+.||+++.|+.++.|. ++++||++|+||.++.|. +++||+++.||++
T Consensus 44 ~IG~~~~I~~~~~i~~~~~~~v~Ig~~~~I~~~~~i~-----------g~~~Ig~~~~Ig~~~~I~-~~~Ig~~~~Ig~~ 111 (167)
T cd00710 44 IIGANVNIQDGVVIHALEGYSVWIGKNVSIAHGAIVH-----------GPAYIGDNCFIGFRSVVF-NAKVGDNCVIGHN 111 (167)
T ss_pred EECCCCEECCCeEEEecCCCCEEECCCceECCCCEEe-----------CCEEECCCCEECCCCEEE-CCEECCCCEEcCC
Confidence 355555555443331 13568999999999999985 678999999999999997 7999999999999
Q ss_pred ccccCCCccCCCcEE
Q 037878 1653 SVAPMHSVLQRGGIY 1667 (2280)
Q Consensus 1653 s~v~~~~~v~~~~~~ 1667 (2280)
|.+.+ ..++++..+
T Consensus 112 s~i~~-~~i~~~~~v 125 (167)
T cd00710 112 AVVDG-VEIPPGRYV 125 (167)
T ss_pred CEEeC-CEeCCCCEE
Confidence 99963 347777766
No 260
>cd04649 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (THP succinyltransferase), C-terminal left-handed parallel alpha-helix (LbH) domain: This group is composed of mostly uncharacterized proteins containing an N-terminal domain of unknown function and a C-terminal LbH domain with similarity to THP succinyltransferase LbH. THP succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA. It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is trimeric and displays the left-handed parallel alpha-helix (LbH) structural motif encoded by the hexapeptide repeat motif.
Probab=98.87 E-value=1.5e-08 Score=105.54 Aligned_cols=80 Identities=15% Similarity=0.136 Sum_probs=61.1
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGAL 1652 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~ 1652 (2280)
+++||+++.|+.. .-..++||++|.|+++|.|... .++ ....+++||++|+||.++.| |++||+|++||++
T Consensus 31 ~a~IG~~~iIn~~----ig~~a~Ighd~~IG~~~~I~~~--l~G-~~~~pV~IG~~~~IG~ga~I--gv~IG~~~vIGaG 101 (147)
T cd04649 31 NAGTLGNCMVEGR----ISSGVIVGKGSDVGGGASIMGT--LSG-GGNNVISIGKRCLLGANSGI--GISLGDNCIVEAG 101 (147)
T ss_pred CCEECCCeEECCc----ccCCEEECCCCEECCCCEEEEE--CCC-CcccCEEECCCCEECCCCEE--eEEECCCCEECCC
Confidence 3567777777621 1123788888888888888622 222 24467999999999999999 8999999999999
Q ss_pred ccccCCCcc
Q 037878 1653 SVAPMHSVL 1661 (2280)
Q Consensus 1653 s~v~~~~~v 1661 (2280)
|+|+++.++
T Consensus 102 svV~k~t~i 110 (147)
T cd04649 102 LYVTAGTKV 110 (147)
T ss_pred CEEeCCeEE
Confidence 999999543
No 261
>PF03486 HI0933_like: HI0933-like protein; InterPro: IPR004792 This is a family of conserved hypothetical proteins that may include proteins with a dinucleotide-binding motif (Rossman fold), including oxidoreductases and dehydrogenases.; PDB: 2I0Z_A 3V76_A 2GQF_A.
Probab=98.85 E-value=1.8e-08 Score=127.50 Aligned_cols=150 Identities=25% Similarity=0.388 Sum_probs=78.7
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC--------ceEEEEeecCccceeeeecccceEEecCCCCceee
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG--------GMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQD 93 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG--------G~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 93 (2280)
+||+|||||+|||.||+.|++.|. +|+||||++++| |||+-..... ....|...
T Consensus 1 ydviIIGgGaAGl~aA~~aa~~g~-~V~vlE~~~~~gkKil~tG~GrCN~tn~~~----------~~~~~~~~------- 62 (409)
T PF03486_consen 1 YDVIIIGGGAAGLMAAITAAEKGA-RVLVLERNKRVGKKILITGNGRCNLTNLNI----------DPSEFLSG------- 62 (409)
T ss_dssp -SEEEE--SHHHHHHHHHHHHTT---EEEE-SSSSS-HHHHHCGGGT-EEEETTS----------SGGGEECS-------
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCcccccceeecCCCCcccccccc----------chhhHhhh-------
Confidence 589999999999999999999998 699999999986 4554322000 00000000
Q ss_pred cccccchhhhhccccccchhhhhccccchhhHHHhhhhhhhHHHHHcCCCCcchhhhhhhhcccccccccccHHHHHHHH
Q 037878 94 IKVADDYVSVISLTLELQDKAKESGRIGVHAVSDLASDLTPTYLEDRGFKSVPKSVAYGYTASGYGFVQDMPYAYIHEFT 173 (2280)
Q Consensus 94 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 173 (2280)
++ ....+.......+.......|+.+.|....
T Consensus 63 ~~--------------------~~~~f~~~~l~~f~~~d~~~ff~~~Gv~~~---------------------------- 94 (409)
T PF03486_consen 63 YG--------------------RNPKFLKSALKRFSPEDLIAFFEELGVPTK---------------------------- 94 (409)
T ss_dssp -T--------------------BTTTCTHHHHHHS-HHHHHHHHHHTT--EE----------------------------
T ss_pred cc--------------------cchHHHHHHHhcCCHHHHHHHHHhcCCeEE----------------------------
Confidence 00 001111222222322222345544443210
Q ss_pred hhccCCeEEEEcCCHHHHHHHHHh---HCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 174 RTSMAGKIRRFKGGYTSLWQKLSK---YLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 174 ~~~~~~~~~~~~gG~~~l~~~la~---~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
....+..|+...-...+.+.|.+ +.|++|+++++|.+|+.++++. ..|+++++ ++++||+||+|
T Consensus 95 -~~~~gr~fP~s~~a~~Vv~~L~~~l~~~gv~i~~~~~V~~i~~~~~~~-f~v~~~~~--~~~~a~~vILA 161 (409)
T PF03486_consen 95 -IEEDGRVFPKSDKASSVVDALLEELKRLGVEIHFNTRVKSIEKKEDGV-FGVKTKNG--GEYEADAVILA 161 (409)
T ss_dssp -E-STTEEEETT--HHHHHHHHHHHHHHHT-EEE-S--EEEEEEETTEE-EEEEETTT--EEEEESEEEE-
T ss_pred -EcCCCEECCCCCcHHHHHHHHHHHHHHcCCEEEeCCEeeeeeecCCce-eEeeccCc--ccccCCEEEEe
Confidence 01123444444456667777654 4589999999999999988863 46777555 58999999999
No 262
>PRK11132 cysE serine acetyltransferase; Provisional
Probab=98.85 E-value=7.3e-09 Score=121.33 Aligned_cols=99 Identities=17% Similarity=0.171 Sum_probs=69.4
Q ss_pred HcCCEECCCcEECc-cccCCCCceEECCCCEeCCCCEEeeccccCCc---eeecCEEECCCcEECCCCEECCCCEECCCC
Q 037878 1315 MLGAKLGSSVLLDT-VDITDPSLVLIGDGAVISEGALIQSHEVKNGV---LSFQPIKIARKVSVGPYAVIQKGSVIGEEA 1390 (2280)
Q Consensus 1315 ~lGa~Ig~~v~i~~-~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~---~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a 1390 (2280)
..|+.|++++.|+. ..+.....++||++|.||++|.|......++. ......+||+||+||++|+|.+|++||+|+
T Consensus 139 ~~gidI~~~a~IG~g~~I~h~~givIG~~a~IGdnv~I~~~VtiGg~~~~~~~~~p~IGd~V~IGaga~Ilggv~IG~~a 218 (273)
T PRK11132 139 AFQVDIHPAAKIGRGIMLDHATGIVIGETAVIENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGA 218 (273)
T ss_pred eeeeEecCcceECCCeEEcCCCCeEECCCCEECCCCEEcCCcEEecCcccCCCcCCEECCCcEEcCCCEEcCCCEECCCC
Confidence 34555555555542 22212234567777777777777544433321 112357999999999999999999999999
Q ss_pred EECcCCcc----CCCCccccCCCceeec
Q 037878 1391 EVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1391 ~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
+||++|+| |+++.+ .|+|++...
T Consensus 219 ~IGAgSvV~~dVp~~~~v-~G~PArvi~ 245 (273)
T PRK11132 219 KIGAGSVVLQPVPPHTTA-AGVPARIVG 245 (273)
T ss_pred EECCCCEECcccCCCcEE-EecCcEEeC
Confidence 99999998 888888 899999763
No 263
>TIGR00965 dapD 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. The closely related TabB protein of Pseudomonas syringae (pv. tabaci) appears to act in the biosynthesis of tabtoxin rather than lysine. The trusted cutoff is set high enough to exclude this gene. Sequences below trusted also include a version of this enzyme which apparently utilize acetate rather than succinate (EC: 2.3.1.89).
Probab=98.84 E-value=2.2e-08 Score=115.73 Aligned_cols=80 Identities=15% Similarity=0.187 Sum_probs=56.8
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCc---eEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIG---FIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~---~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
|+.||+++.|.+. ++||++|.||++|.|.++...++. ...++++|||+||||.+|.|.+|++||++|+|
T Consensus 129 ga~IGeGt~I~~~--------a~IG~~v~IG~nv~I~~g~~IgG~~ep~~~~~ViIgDnv~IGa~a~I~~GV~IG~gavI 200 (269)
T TIGR00965 129 GAYVDEGTMVDTW--------ATVGSCAQIGKNVHLSGGVGIGGVLEPLQANPTIIEDNCFIGARSEIVEGVIVEEGSVI 200 (269)
T ss_pred CcEECCCCEECCC--------cEECCCCEECCCCEEcCCcccCCCcccCCCCCeEECCCCEECCCCEEcCCCEECCCCEE
Confidence 3567777777765 334444444444444333222222 24578999999999999999999999999999
Q ss_pred ccCccccCCCc
Q 037878 1650 GALSVAPMHSV 1660 (2280)
Q Consensus 1650 g~~s~v~~~~~ 1660 (2280)
|++++|.++.+
T Consensus 201 GaGavI~~~~~ 211 (269)
T TIGR00965 201 SMGVFIGQSTK 211 (269)
T ss_pred eCCCEECCCCE
Confidence 99999998843
No 264
>PLN02296 carbonate dehydratase
Probab=98.83 E-value=3.8e-08 Score=116.34 Aligned_cols=71 Identities=15% Similarity=0.204 Sum_probs=58.4
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE-ccC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL-GAL 1652 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v-g~~ 1652 (2280)
+.||++|.|+.++.+ +.++|||+|+|+.++.|. ..++||++|.||++++|.++++|++++++ |.-
T Consensus 120 siIG~~v~IG~~avI---~g~~Igd~v~IG~ga~I~-----------~gv~Ig~~a~IgagSvV~~~~~I~~~~~~~G~P 185 (269)
T PLN02296 120 TIIGDNVTIGHSAVL---HGCTVEDEAFVGMGATLL-----------DGVVVEKHAMVAAGALVRQNTRIPSGEVWAGNP 185 (269)
T ss_pred cEeCCCCEECCCcee---cCCEECCCcEECCCcEEC-----------CCeEECCCCEECCCCEEecCCEeCCCeEEeccC
Confidence 578999999887544 348899999999999885 56799999999999999999999999986 555
Q ss_pred ccccCC
Q 037878 1653 SVAPMH 1658 (2280)
Q Consensus 1653 s~v~~~ 1658 (2280)
+.+.++
T Consensus 186 A~~ir~ 191 (269)
T PLN02296 186 AKFLRK 191 (269)
T ss_pred cEEeCC
Confidence 555555
No 265
>cd03349 LbH_XAT Xenobiotic acyltransferase (XAT): The XAT class of hexapeptide acyltransferases is composed of a large number of microbial enzymes that catalyze the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. Members of this class of enzymes include Enterococcus faecium streptogramin A acetyltransferase and Pseudomonas aeruginosa chloramphenicol acetyltransferase. They contain repeated copies of a six-residue hexapeptide repeat sequence motif (X-[STAV]-X-[LIV]-[GAED]-X) and adopt a left-handed parallel beta helix (LbH) structure. The active enzyme is a trimer with CoA and substrate binding sites at the interface of two separate LbH subunits. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients.
Probab=98.82 E-value=1.1e-08 Score=110.32 Aligned_cols=95 Identities=19% Similarity=0.074 Sum_probs=78.0
Q ss_pred CEECCCcEECc-cccCCCCceEECCCCEeCCCCEEeec---cccC--------------------CceeecCEEECCCcE
Q 037878 1318 AKLGSSVLLDT-VDITDPSLVLIGDGAVISEGALIQSH---EVKN--------------------GVLSFQPIKIARKVS 1373 (2280)
Q Consensus 1318 a~Ig~~v~i~~-~~~~~~~~~~IG~~~~I~~~~~l~~~---~~~~--------------------~~~~~~~i~Ig~~~~ 1373 (2280)
.+||+++.|+. ........++||++|.|+++|.|..+ .+.. .....+++.||++|+
T Consensus 2 ~~iG~~s~i~~~~~~~~~~~i~IG~~~~I~~~v~i~~~~~H~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~ 81 (145)
T cd03349 2 ISVGDYSYGSGPDCDVGGDKLSIGKFCSIAPGVKIGLGGNHPTDWVSTYPFYIFGGEWEDDAKFDDWPSKGDVIIGNDVW 81 (145)
T ss_pred EEEeCceeeCCCCceEeCCCeEECCCCEECCCCEECCCCCCCCCCccccceEeeccccccccccccccccCCcEECCCCE
Confidence 47999999976 44444468999999999999999655 2221 122457899999999
Q ss_pred ECCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceee
Q 037878 1374 VGPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYV 1413 (2280)
Q Consensus 1374 iG~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~ 1413 (2280)
||++++|.+|++||++++||++|+| ++++.+ .|+||+..
T Consensus 82 Ig~~~~i~~gv~Ig~~~vIgags~V~~~v~~~~v~-~G~Pa~~i 124 (145)
T cd03349 82 IGHGATILPGVTIGDGAVIAAGAVVTKDVPPYAIV-GGNPAKVI 124 (145)
T ss_pred ECCCCEEeCCCEECCCCEECCCCEEccccCCCeEE-EecCCEee
Confidence 9999999999999999999999997 777777 89999876
No 266
>PRK13977 myosin-cross-reactive antigen; Provisional
Probab=98.82 E-value=2.4e-08 Score=127.94 Aligned_cols=47 Identities=30% Similarity=0.405 Sum_probs=41.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC----CCCceEEEecCCCCCceEEEEee
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKL----GYRNVTLLEKYHTVGGMCESVEI 66 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~----G~~~VtVlEk~~riGG~~~t~~~ 66 (2280)
+.+++|+|||||+|||+||++|.+. |. +|+||||++++||+++++..
T Consensus 20 ~~~~~a~IIGaGiAGLAAA~~L~~dg~~~G~-~VtIlEk~~~~GG~~~~~~~ 70 (576)
T PRK13977 20 VDNKKAYIIGSGLASLAAAVFLIRDGQMPGE-NITILEELDVPGGSLDGAGN 70 (576)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHccCCCCC-cEEEEeCCCCCCCCccCccc
Confidence 3468999999999999999999996 56 69999999999999987653
No 267
>PLN02694 serine O-acetyltransferase
Probab=98.82 E-value=8.4e-09 Score=120.15 Aligned_cols=100 Identities=21% Similarity=0.199 Sum_probs=77.9
Q ss_pred HHcCCEECCCcEECccc-cCCCCceEECCCCEeCCCCEEeeccccCCce---eecCEEECCCcEECCCCEECCCCEECCC
Q 037878 1314 EMLGAKLGSSVLLDTVD-ITDPSLVLIGDGAVISEGALIQSHEVKNGVL---SFQPIKIARKVSVGPYAVIQKGSVIGEE 1389 (2280)
Q Consensus 1314 R~lGa~Ig~~v~i~~~~-~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~---~~~~i~Ig~~~~iG~~~~i~pg~~ig~~ 1389 (2280)
+.+|..|+.++.|+... +.....++||++|.||++|.|..+...++.. ..+..+||++|+||++++|.+|++||++
T Consensus 157 ~~~gvdI~p~A~IG~gv~Idh~tGVVIGe~a~IGdnv~I~~~VtLGg~g~~~~~r~piIGd~V~IGagA~Ilggi~IGd~ 236 (294)
T PLN02694 157 DVFAVDIHPAAKIGKGILFDHATGVVIGETAVIGNNVSILHHVTLGGTGKACGDRHPKIGDGVLIGAGATILGNVKIGEG 236 (294)
T ss_pred cceeEEeCCcceecCCEEEeCCCCeEECCCcEECCCCEEeecceeCCcccccCCCccEECCCeEECCeeEECCCCEECCC
Confidence 34565666666664322 2122358899999999999998776655432 2467899999999999999999999999
Q ss_pred CEECcCCcc----CCCCccccCCCceeec
Q 037878 1390 AEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1390 a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
|.||++|+| ++++.+ .|+|++...
T Consensus 237 a~IGAgSVV~kdVP~~~~v-~G~PAkiv~ 264 (294)
T PLN02694 237 AKIGAGSVVLIDVPPRTTA-VGNPARLVG 264 (294)
T ss_pred CEECCCCEECCcCCCCcEE-EccCcEEEc
Confidence 999999999 788888 899999874
No 268
>COG0663 PaaY Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily [General function prediction only]
Probab=98.82 E-value=9.9e-09 Score=109.76 Aligned_cols=98 Identities=23% Similarity=0.292 Sum_probs=67.8
Q ss_pred CEECCCcEECc--cccCCCCceEECCCCEeCCCCEEeecc----ccCCceee------cCEEECCCcEECCCCEECCCCE
Q 037878 1318 AKLGSSVLLDT--VDITDPSLVLIGDGAVISEGALIQSHE----VKNGVLSF------QPIKIARKVSVGPYAVIQKGSV 1385 (2280)
Q Consensus 1318 a~Ig~~v~i~~--~~~~~~~~~~IG~~~~I~~~~~l~~~~----~~~~~~~~------~~i~Ig~~~~iG~~~~i~pg~~ 1385 (2280)
++||+++.|.. ..-.+...+.||++|.|.++|+|.+.. ..++...+ .-++||++|+||++|+|+.|++
T Consensus 30 V~Ig~~vsIw~~aVlRgD~~~I~IG~~tNIQDg~ViH~~~~~p~~IG~~vtIGH~aivHGc~Ig~~~lIGmgA~vldga~ 109 (176)
T COG0663 30 VRIGAGVSIWPGAVLRGDVEPIRIGARTNIQDGVVIHADPGYPVTIGDDVTIGHGAVVHGCTIGDNVLIGMGATVLDGAV 109 (176)
T ss_pred EEECCCCEECCceEEEccCCceEECCCceecCCeEEecCCCCCeEECCCcEEcCccEEEEeEECCCcEEecCceEeCCcE
Confidence 55666666632 223344667777777777777775432 11222211 2278999999999999999999
Q ss_pred ECCCCEECcCCccCCCCccc-----cCCCceeecc
Q 037878 1386 IGEEAEVAPLQKSEGGKPIL-----KSTNANYVQK 1415 (2280)
Q Consensus 1386 ig~~a~ig~~s~v~~~~~~~-----~g~p~~~~~~ 1415 (2280)
||++|+||++|.|+++..++ .|+|++..++
T Consensus 110 IG~~~iVgAgalV~~~k~~p~~~L~~G~Pak~~r~ 144 (176)
T COG0663 110 IGDGSIVGAGALVTPGKEIPGGSLVVGSPAKVVRP 144 (176)
T ss_pred ECCCcEEccCCcccCCcCCCCCeEeecCcceeeec
Confidence 99999999999996655553 4888887643
No 269
>TIGR03536 DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) is involved in the succinylated branch of the "lysine biosynthesis via diaminopimelate (DAP)" pathway (GenProp0125). This model represents a clade of DapD sequences most closely related to the actinobacterial DapD family represented by the TIGR03535 model. All of the genes evaluated for the seed of this model are found in genomes where the downstream desuccinylase is present, but known DapD genes are absent. Additionally, many of the genes identified by this model are found proximal to genes involved in this lysine biosynthesis pathway.
Probab=98.81 E-value=2.2e-08 Score=115.61 Aligned_cols=61 Identities=16% Similarity=0.181 Sum_probs=45.1
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCC
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHS 1659 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~ 1659 (2280)
++||+||.||++|.|+... .++.- .+++||++|+||.++.| |+.||++|+||+|++|+.+.
T Consensus 225 avIGhds~IG~gasIg~tL-sGg~~--~~V~IGe~~lIGagA~I--GI~IGd~~iIGAGavVtagT 285 (341)
T TIGR03536 225 VMVGKGSDLGGGCSTMGTL-SGGGN--IVISVGEGCLLGANAGI--GIPLGDRCTVEAGLYITAGT 285 (341)
T ss_pred CEECCCCEECCCCEEeEEE-eCCCc--eeEEECCCcEECCCCEE--eeEECCCCEECCCCEEeCCc
Confidence 5566666666666663221 11111 22899999999999999 99999999999999998884
No 270
>PRK09677 putative lipopolysaccharide biosynthesis O-acetyl transferase WbbJ; Provisional
Probab=98.80 E-value=1.4e-08 Score=115.68 Aligned_cols=97 Identities=21% Similarity=0.276 Sum_probs=80.3
Q ss_pred CCEECCCcEECc-cccCCCCceEECCCCEeCCCCEEeeccc---------c-------CCceeecCEEECCCcEECCCCE
Q 037878 1317 GAKLGSSVLLDT-VDITDPSLVLIGDGAVISEGALIQSHEV---------K-------NGVLSFQPIKIARKVSVGPYAV 1379 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~-~~~~~~~~~~IG~~~~I~~~~~l~~~~~---------~-------~~~~~~~~i~Ig~~~~iG~~~~ 1379 (2280)
..+||++|.|+. ..+.....++||++|.|+++|.|.++.. . ...+..++++||++|+||.+++
T Consensus 65 ~i~IG~~v~Ig~~v~I~~~~~v~IG~~v~Ig~~v~I~~~~hg~~~~~~~~~~~~~~~~~~~~~~~~v~Ig~~~~ig~~~~ 144 (192)
T PRK09677 65 KLFFGDNVQVNDYVHIACIESITIGRDTLIASKVFITDHNHGSFKHSDDFSSPNLPPDMRTLESSAVVIGQRVWIGENVT 144 (192)
T ss_pred eEEECCCCEECCCcEEccCceEEECCCCEECCCeEEECCCCccccccccccccccChhhcccccCCeEEcCCcEECCCCE
Confidence 578999999965 3444446799999999999999987532 1 1234568999999999999999
Q ss_pred ECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1380 IQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1380 i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
|.+|++||++|+||++|+| ++++.+ .|+||+...
T Consensus 145 i~~g~~Ig~~~~Iga~s~v~~~i~~~~~~-~G~Pa~~ik 182 (192)
T PRK09677 145 ILPGVSIGNGCIVGANSVVTKSIPENTVI-AGNPAKIIK 182 (192)
T ss_pred EcCCCEECCCCEECCCCEECcccCCCcEE-EecCCEEEe
Confidence 9999999999999999999 678777 899998764
No 271
>PRK14355 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.80 E-value=3.6e-08 Score=129.51 Aligned_cols=83 Identities=16% Similarity=0.317 Sum_probs=58.7
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeC-------CCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVL-------PNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~-------~g~~ig~ 1645 (2280)
|++||+++.|+..+. .+.+.||+++.+.+.+.+ +.+.||++|.||+++++. .++.||+
T Consensus 338 ~~~i~~~~~ig~~~~---~~~~~ig~~~~~~~~~~i------------g~~~ig~~~~ig~~~~~~~~~~~~~~~~~ig~ 402 (459)
T PRK14355 338 GTELSAHVKIGNFVE---TKKIVMGEGSKASHLTYL------------GDATIGRNVNIGCGTITCNYDGVKKHRTVIED 402 (459)
T ss_pred CCEeCCCCEECCCcc---ccCCEECCCceeeeeccc------------cCCEECCCCEEccceeecCcCCccccCcEecC
Confidence 456777777766532 234667777777555544 557899999999988763 3578999
Q ss_pred CcEEccCccccCCCccCCCcEEecC
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
++.||.++.+-.+-.|.+++...+.
T Consensus 403 ~~~ig~~~~i~~~~~ig~~~~i~a~ 427 (459)
T PRK14355 403 DVFVGSDVQFVAPVTVGRNSLIAAG 427 (459)
T ss_pred CeEEcCCCEEeCCcEECCCCEECCC
Confidence 9999999888777667777776443
No 272
>cd03359 LbH_Dynactin_5 Dynactin 5 (or subunit p25); Dynactin is a major component of the activator complex that stimulates dynein-mediated vesicle transport. Dynactin is a heterocomplex of at least eight subunits, including a 150,000-MW protein called Glued, the actin-capping protein Arp1, and dynamatin. In vitro binding experiments show that dynactin enhances dynein-dependent motility, possibly through interaction with microtubules and vesicles. Subunit p25 is part of the pointed-end subcomplex in dynactin that also includes p26, p27, and Arp11. This subcomplex interacts with membranous cargoes. p25 and p27 contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), indicating a left-handed parallel beta helix (LbH) structural domain. Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=98.80 E-value=6e-08 Score=107.55 Aligned_cols=71 Identities=21% Similarity=0.245 Sum_probs=54.0
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEcc-C
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGA-L 1652 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~-~ 1652 (2280)
++||+++.|+....+.. +.||+++.|++++.|+ ..+.||++++|+.++.|.++++|+++++++. .
T Consensus 73 v~Ig~~~~Ig~~~~i~~---~~Ig~~v~Ig~~~~Ig-----------~~~~I~~~~~i~~g~~V~~~~~i~~~~vv~g~p 138 (161)
T cd03359 73 LHIGDYVFIGENCVVNA---AQIGSYVHIGKNCVIG-----------RRCIIKDCVKILDGTVVPPDTVIPPYSVVSGRP 138 (161)
T ss_pred eEECCccEECCCCEEEe---eEEcCCcEECCCCEEc-----------CCCEECCCcEECCCCEECCCCEeCCCCEEeccc
Confidence 46888888877654443 7889999999988885 4568888888888888888888888888875 5
Q ss_pred ccccCC
Q 037878 1653 SVAPMH 1658 (2280)
Q Consensus 1653 s~v~~~ 1658 (2280)
+.+.++
T Consensus 139 a~~i~~ 144 (161)
T cd03359 139 ARFIGE 144 (161)
T ss_pred cEEEEe
Confidence 555554
No 273
>TIGR01173 glmU UDP-N-acetylglucosamine diphosphorylase/glucosamine-1-phosphate N-acetyltransferase. This protein is a bifunctional enzyme, GlmU, which catalyzes last two reactions in the four-step pathway of UDP-N-acetylglucosamine biosynthesis from fructose-6-phosphate. Its reaction product is required from peptidoglycan biosynthesis, LPS biosynthesis in species with LPS, and certain other processes.
Probab=98.80 E-value=3.8e-08 Score=129.78 Aligned_cols=82 Identities=17% Similarity=0.319 Sum_probs=58.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCCC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSRD 1646 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~~ 1646 (2280)
+.||++|.|+..+.+. .+.||+++.|++.+.+ +.++||++|+||+++++.. +++|||+
T Consensus 332 ~~i~~~~~Ig~~~~i~---~~~ig~~~~i~~~~~i------------~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~Igd~ 396 (451)
T TIGR01173 332 SVLGAGVHIGNFVETK---NARIGKGSKAGHLSYL------------GDAEIGSNVNIGAGTITCNYDGANKHKTIIGDG 396 (451)
T ss_pred CEECCCcEEccceeec---CcEECCCcEecceeeE------------eeeEEcCCcEECCCeEEeCcccccCCCCEECCC
Confidence 4555555555543221 3566666666666555 6689999999999998864 6899999
Q ss_pred cEEccCccccCCCccCCCcEEecC
Q 037878 1647 VILGALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
+.||.++.+..+-.|.+++...+.
T Consensus 397 ~~ig~~~~i~~~~~ig~~~~i~~g 420 (451)
T TIGR01173 397 VFIGSNTQLVAPVKVGDGATIAAG 420 (451)
T ss_pred cEECCCCEEECCcEECCCCEEccC
Confidence 999999988877667777776543
No 274
>KOG4750 consensus Serine O-acetyltransferase [Amino acid transport and metabolism]
Probab=98.76 E-value=9.6e-09 Score=110.53 Aligned_cols=95 Identities=24% Similarity=0.294 Sum_probs=68.1
Q ss_pred CCEECCCcEECc-cccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcC
Q 037878 1317 GAKLGSSVLLDT-VDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPL 1395 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~-~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~ 1395 (2280)
+||||++-.++. .-++.-.-..||++|+|..++++++---.-+. -.| .||+||+||++++|.+|++||+|++||+|
T Consensus 154 aa~ig~gilldhatgvvigeTAvvg~~vSilH~Vtlggtgk~~gd--rhP-~Igd~vliGaGvtILgnV~IGegavIaAG 230 (269)
T KOG4750|consen 154 AAKIGKGILLDHATGVVIGETAVVGDNVSILHPVTLGGTGKGSGD--RHP-KIGDNVLIGAGVTILGNVTIGEGAVIAAG 230 (269)
T ss_pred hhhcccceeeccccceeecceeEeccceeeecceeeccccccccc--cCC-cccCCeEEccccEEeCCeeECCCcEEecc
Confidence 488888888843 22222233455666666666666533211111 124 89999999999999999999999999999
Q ss_pred Ccc----CCCCccccCCCceeecc
Q 037878 1396 QKS----EGGKPILKSTNANYVQK 1415 (2280)
Q Consensus 1396 s~v----~~~~~~~~g~p~~~~~~ 1415 (2280)
|+| |+++.. .|+||+..++
T Consensus 231 svV~kDVP~~~~A-vGnPAklIg~ 253 (269)
T KOG4750|consen 231 SVVLKDVPPNTLA-VGNPAKLIGK 253 (269)
T ss_pred ceEEeccCCCcee-cCCchhhccc
Confidence 999 778777 8999998753
No 275
>PLN02739 serine acetyltransferase
Probab=98.75 E-value=4.2e-08 Score=116.34 Aligned_cols=99 Identities=19% Similarity=0.182 Sum_probs=65.6
Q ss_pred HcCCEECCCcEECccc-cCCCCceEECCCCEeCCCCEEeeccccCCc---eeecCEEECCCcEECCCCEECCCCEECCCC
Q 037878 1315 MLGAKLGSSVLLDTVD-ITDPSLVLIGDGAVISEGALIQSHEVKNGV---LSFQPIKIARKVSVGPYAVIQKGSVIGEEA 1390 (2280)
Q Consensus 1315 ~lGa~Ig~~v~i~~~~-~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~---~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a 1390 (2280)
.+|..|+.++.|+... +.....+.||++|.||++|.|.....-++. ..-+..+||++|+||++|+|..|++||+|+
T Consensus 203 ~~GidI~p~A~IG~Gv~IdHg~GVVIG~~avIGdnv~I~~gVTIGg~g~~~g~r~p~IGd~V~IGagA~IlG~V~IGd~a 282 (355)
T PLN02739 203 VFGIDIHPAARIGKGILLDHGTGVVIGETAVIGDRVSILHGVTLGGTGKETGDRHPKIGDGALLGACVTILGNISIGAGA 282 (355)
T ss_pred HhCcccCCCccccCceEEecCCceEECCCCEECCCCEEcCCceeCCcCCcCCCCCcEECCCCEEcCCCEEeCCeEECCCC
Confidence 4455555555443221 111224555555555555555432222211 011357899999999999999999999999
Q ss_pred EECcCCcc----CCCCccccCCCceeec
Q 037878 1391 EVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1391 ~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
+||++|+| |+++.+ .|+|++...
T Consensus 283 iIGAGSVV~kDVP~~stv-vG~PAriI~ 309 (355)
T PLN02739 283 MVAAGSLVLKDVPSHSMV-AGNPAKLIG 309 (355)
T ss_pred EECCCCEECCCCCCCcEE-EecCCEEec
Confidence 99999997 888888 899999864
No 276
>PF13450 NAD_binding_8: NAD(P)-binding Rossmann-like domain; PDB: 3KA7_A 1V0J_D 3INR_B 3KYB_B 3GF4_A 2BI8_A 3INT_B 1WAM_A 2BI7_A 3MJ4_G ....
Probab=98.75 E-value=6.8e-09 Score=96.17 Aligned_cols=42 Identities=50% Similarity=0.783 Sum_probs=38.6
Q ss_pred EECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecC
Q 037878 26 IVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEE 68 (2280)
Q Consensus 26 IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~ 68 (2280)
|||||+|||+||++|+++|+ +|+|+|+++++||++++.+.++
T Consensus 1 IiGaG~sGl~aA~~L~~~g~-~v~v~E~~~~~GG~~~~~~~~g 42 (68)
T PF13450_consen 1 IIGAGISGLAAAYYLAKAGY-RVTVFEKNDRLGGRARSFRIPG 42 (68)
T ss_dssp EES-SHHHHHHHHHHHHTTS-EEEEEESSSSSSGGGCEEEETT
T ss_pred CEeeCHHHHHHHHHHHHCCC-cEEEEecCcccCcceeEEEECC
Confidence 89999999999999999998 7999999999999999988754
No 277
>TIGR01172 cysE serine O-acetyltransferase. Cysteine biosynthesis
Probab=98.74 E-value=4e-08 Score=108.54 Aligned_cols=95 Identities=17% Similarity=0.206 Sum_probs=65.7
Q ss_pred HHHcCCEECCCcEECccc-cC------CCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCE
Q 037878 1313 FEMLGAKLGSSVLLDTVD-IT------DPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSV 1385 (2280)
Q Consensus 1313 ~R~lGa~Ig~~v~i~~~~-~~------~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ 1385 (2280)
....|+.|++++.|+... +. ....++||+||.|+++|.|++.....+ ....+||++|+||++++|..+++
T Consensus 57 ~~~~~~~I~~~~~Ig~~~~i~~~~g~~Ig~~~~IG~~~~I~~~v~ig~~~~~~~---~~~~~Ig~~v~Ig~~a~I~~~v~ 133 (162)
T TIGR01172 57 RVLTGVDIHPGARIGRGVFIDHGTGVVIGETAVIGDDVTIYHGVTLGGTGKEKG---KRHPTVGEGVMIGAGAKVLGNIE 133 (162)
T ss_pred heeeCeEeCCCCEECCCeEECCCCeEEECCCCEECCCCEEcCCCEECCCccccC---CcCCEECCCcEEcCCCEEECCcE
Confidence 334466766666665322 21 123455666666666666654422111 34568999999999999999999
Q ss_pred ECCCCEECcCCcc----CCCCccccCCCce
Q 037878 1386 IGEEAEVAPLQKS----EGGKPILKSTNAN 1411 (2280)
Q Consensus 1386 ig~~a~ig~~s~v----~~~~~~~~g~p~~ 1411 (2280)
||+++.||++|+| |+++.+ .|+|++
T Consensus 134 IG~~~~Iga~s~V~~dvp~~~~~-~G~Par 162 (162)
T TIGR01172 134 VGENAKIGANSVVLKDVPPGATV-VGVPAR 162 (162)
T ss_pred ECCCCEECCCCEECCCCCCCCEE-EeecCC
Confidence 9999999999998 777777 778764
No 278
>cd03358 LbH_WxcM_N_like WcxM-like, Left-handed parallel beta-Helix (LbH) N-terminal domain: This group is composed of Xanthomonas campestris WcxM and proteins with similarity to the WcxM N-terminal domain. WcxM is thought to be bifunctional, catalyzing both the isomerization and transacetylation reactions of keto-hexoses. It contains an N-terminal LbH domain responsible for the transacetylation function and a C-terminal isomerase domain. The LbH domain contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), typical of enzymes with acyltransferase activity.
Probab=98.74 E-value=2.9e-08 Score=104.60 Aligned_cols=95 Identities=20% Similarity=0.199 Sum_probs=78.4
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCce----eecCEEECCCcEECCCCEECCCCEECCCCEE
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVL----SFQPIKIARKVSVGPYAVIQKGSVIGEEAEV 1392 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~----~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~i 1392 (2280)
++.||+++.|++.... ....+||++|.|++++.+.+..+.+... .+++++||++|+||++++|.+|++||+++.|
T Consensus 16 ~~~Ig~~~~I~~~~~i-~~~~~Ig~~~~I~~~~~i~~~~~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~v~~~~~ig~~~~i 94 (119)
T cd03358 16 DVKIGDNVKIQSNVSI-YEGVTIEDDVFIGPNVVFTNDLYPRSKIYRKWELKGTTVKRGASIGANATILPGVTIGEYALV 94 (119)
T ss_pred CcEECCCcEECCCcEE-eCCeEECCCcEEcCCeEEecCCCCccccccccccCCcEECCCcEECcCCEEeCCcEECCCCEE
Confidence 4778888888654432 3568899999999999998776665554 5899999999999999999999999999999
Q ss_pred CcCCcc----CCCCccccCCCceee
Q 037878 1393 APLQKS----EGGKPILKSTNANYV 1413 (2280)
Q Consensus 1393 g~~s~v----~~~~~~~~g~p~~~~ 1413 (2280)
++++.+ ++++.| .|+|++..
T Consensus 95 ~~~~~v~~~i~~~~~~-~G~pa~~~ 118 (119)
T cd03358 95 GAGAVVTKDVPPYALV-VGNPARII 118 (119)
T ss_pred ccCCEEeCcCCCCeEE-ecCcceec
Confidence 999988 667777 78998753
No 279
>PRK09451 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.74 E-value=6.7e-08 Score=126.98 Aligned_cols=82 Identities=18% Similarity=0.357 Sum_probs=54.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCCC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSRD 1646 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~~ 1646 (2280)
+.||+++.|+..+.+. .+.||+++.+++.+.+ +.++||++|+||+++++.. +++|||+
T Consensus 336 ~~i~~~~~ig~~~~i~---~~~i~~~~~~~~~~~~------------g~~~ig~~~~ig~~~~~~~~~~~~~~~~~Igd~ 400 (456)
T PRK09451 336 AELAEGAHVGNFVEMK---KARLGKGSKAGHLTYL------------GDAEIGDNVNIGAGTITCNYDGANKFKTIIGDD 400 (456)
T ss_pred CEECCCceeccceeee---ceeeCCCCccCccccc------------cccEECCCCEEcCCeEEecccCcccCCCEECCC
Confidence 3444444444432221 2566777776665555 6679999999999987742 4789999
Q ss_pred cEEccCccccCCCccCCCcEEecC
Q 037878 1647 VILGALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
+.||.+|.+..+-.|.++++..+.
T Consensus 401 ~~ig~~~~i~~~~~ig~~~~i~~g 424 (456)
T PRK09451 401 VFVGSDTQLVAPVTVGKGATIGAG 424 (456)
T ss_pred cEECCCCEEeCCcEECCCCEECCC
Confidence 999999988776556666665443
No 280
>PLN02357 serine acetyltransferase
Probab=98.73 E-value=2.4e-08 Score=119.67 Aligned_cols=94 Identities=21% Similarity=0.280 Sum_probs=65.8
Q ss_pred CCEECCCcEECcc-ccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcC
Q 037878 1317 GAKLGSSVLLDTV-DITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPL 1395 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~-~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~ 1395 (2280)
+++||+|+.|+.. .+.....++||++|.|..+|+|++.....+ .+.++||++|+||+++.|..|++||+++.||++
T Consensus 232 ~a~IG~Gv~Idh~~giVIGe~avIGdnV~I~~gVtIGg~g~~~g---~~~piIGd~V~IGagA~IlggV~IGdga~IGAg 308 (360)
T PLN02357 232 GAKIGQGILLDHATGVVIGETAVVGNNVSILHNVTLGGTGKQSG---DRHPKIGDGVLIGAGTCILGNITIGEGAKIGAG 308 (360)
T ss_pred CCEECCCeEECCCCceEECCCCEECCCCEEeCCceecCccccCC---ccCceeCCCeEECCceEEECCeEECCCCEECCC
Confidence 3556666666421 111223345555555555555554322111 356899999999999999999999999999999
Q ss_pred Ccc----CCCCccccCCCceeec
Q 037878 1396 QKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1396 s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
|+| ++++.+ .|+|++...
T Consensus 309 SVV~~dVP~~~~v-~G~PArvv~ 330 (360)
T PLN02357 309 SVVLKDVPPRTTA-VGNPARLIG 330 (360)
T ss_pred CEECcccCCCcEE-ECCCeEEEc
Confidence 998 778887 799999873
No 281
>KOG4254 consensus Phytoene desaturase [Coenzyme transport and metabolism]
Probab=98.72 E-value=3.2e-07 Score=109.46 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=53.0
Q ss_pred ccCCeEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 176 SMAGKIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 176 ~~~~~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
...+.|..+.||+..+.+++++.+ |.+|.+++.|.+|..++++ .+.|+..+| +.++++.||++
T Consensus 251 ~~~g~~~Yp~GG~Gavs~aia~~~~~~GaeI~tka~Vq~Illd~gk-a~GV~L~dG--~ev~sk~VvSN 316 (561)
T KOG4254|consen 251 GHKGGWGYPRGGMGAVSFAIAEGAKRAGAEIFTKATVQSILLDSGK-AVGVRLADG--TEVRSKIVVSN 316 (561)
T ss_pred ccCCcccCCCCChhHHHHHHHHHHHhccceeeehhhhhheeccCCe-EEEEEecCC--cEEEeeeeecC
Confidence 346778889999999999998654 8999999999999988755 478888999 57888777776
No 282
>cd04745 LbH_paaY_like paaY-like: This group is composed by uncharacterized proteins with similarity to the protein product of the E. coli paaY gene, which is part of the paa gene cluster responsible for phenylacetic acid degradation. Proteins in this group are expected to adopt the left-handed parallel beta-helix (LbH) structure. They contain imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Similarity to gamma carbonic anhydrase and Ferripyochelin Binding Protein (FBP) may suggest metal binding capacity.
Probab=98.72 E-value=1.3e-07 Score=104.31 Aligned_cols=63 Identities=13% Similarity=0.242 Sum_probs=49.1
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg 1650 (2280)
+.||+++.|+....+. .+.||++|+|+.++.|. ..++||++++||+++++.++..|++++++.
T Consensus 62 ~~Ig~~~~Ig~~~~i~---~~~Ig~~~~Ig~~~~I~-----------~g~~Ig~~~~Ig~~s~v~~~~~i~~~~~v~ 124 (155)
T cd04745 62 TVLEENGHIGHGAILH---GCTIGRNALVGMNAVVM-----------DGAVIGEESIVGAMAFVKAGTVIPPRSLIA 124 (155)
T ss_pred eEEcCCCEECCCcEEE---CCEECCCCEECCCCEEe-----------CCCEECCCCEECCCCEeCCCCEeCCCCEEe
Confidence 3466666666543332 37899999999998884 446899999999999999999999998874
No 283
>TIGR02287 PaaY phenylacetic acid degradation protein PaaY. Members of this family are located next to other genes organized into apparent operons for phenylacetic acid degradation. PaaY is located near the end of these gene clusters and often next to PaaX, a transcriptional regulator.
Probab=98.71 E-value=1.2e-07 Score=107.19 Aligned_cols=62 Identities=8% Similarity=0.150 Sum_probs=48.3
Q ss_pred eeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc
Q 037878 1575 KIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg 1650 (2280)
.||+++.|+..+.+. .+.||++|+|+.++.+. ..++||++|+||.++.|.+++.|++++++.
T Consensus 71 iIg~~~~Ig~~a~I~---~siIg~~~~IG~ga~I~-----------~g~~IG~~s~Vgags~V~~~~~ip~~~l~~ 132 (192)
T TIGR02287 71 VVEENGHVGHGAILH---GCIVGRNALVGMNAVVM-----------DGAVIGENSIVAASAFVKAGAEMPAQYLVV 132 (192)
T ss_pred eECCCCEECCCCEEc---CCEECCCCEECCCcccC-----------CCeEECCCCEEcCCCEECCCCEECCCeEEE
Confidence 466666666654333 27888888888888773 446899999999999999999999998865
No 284
>PLN02472 uncharacterized protein
Probab=98.71 E-value=1.6e-07 Score=109.57 Aligned_cols=63 Identities=19% Similarity=0.320 Sum_probs=50.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg 1650 (2280)
+.||++|.|+..+.+. .++||++|.||.+|.|. ..++||++|.||.++++.+|.+|+++.++.
T Consensus 127 tvIG~~v~IG~~s~L~---~~~Igd~v~IG~~svI~-----------~gavIg~~~~Ig~gsvV~~g~~Ip~g~~~~ 189 (246)
T PLN02472 127 TLIDRYVTIGAYSLLR---SCTIEPECIIGQHSILM-----------EGSLVETHSILEAGSVLPPGRRIPTGELWA 189 (246)
T ss_pred cEECCCCEECCCcEEC---CeEEcCCCEECCCCEEC-----------CCCEECCCCEECCCCEECCCCEeCCCCEEE
Confidence 4678888887765443 48999999999998885 456899999999999999998888888876
No 285
>cd04645 LbH_gamma_CA_like Gamma carbonic anhydrase-like: This family is composed of gamma carbonic anhydrase (CA), Ferripyochelin Binding Protein (FBP), E. coli paaY protein, and similar proteins. CAs are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism, involving the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide, followed by the regeneration of the active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. They are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionary distinct groups - alpha, beta and gamma carbonic anhydrases - which show no significant sequence identity or structural similarity. Gamma CAs are trimeric enzymes with left-handed parallel beta helix (LbH) structural domain.
Probab=98.70 E-value=1.6e-07 Score=103.55 Aligned_cols=70 Identities=19% Similarity=0.266 Sum_probs=55.9
Q ss_pred eeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE-ccCc
Q 037878 1575 KIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL-GALS 1653 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v-g~~s 1653 (2280)
.||+++.|+..+.+.. +.||++++|+.++.+. +.++||++|+||.++.+.++++|++++++ |..+
T Consensus 62 ~Ig~~~~I~~~~~i~~---~~Ig~~~~Ig~~~~v~-----------~~~~ig~~~~ig~~~~v~~~~~i~~~~~~~g~~~ 127 (153)
T cd04645 62 IIGDNVTVGHGAVLHG---CTIGDNCLIGMGAIIL-----------DGAVIGKGSIVAAGSLVPPGKVIPPGSLVAGSPA 127 (153)
T ss_pred EEcCCcEECCCcEEee---eEECCCCEECCCCEEc-----------CCCEECCCCEECCCCEECCCCEeCCCCEEeCCcc
Confidence 4666666665543432 7899999999998884 45789999999999999999999999999 6666
Q ss_pred cccCC
Q 037878 1654 VAPMH 1658 (2280)
Q Consensus 1654 ~v~~~ 1658 (2280)
.+.++
T Consensus 128 ~~~~~ 132 (153)
T cd04645 128 KVVRE 132 (153)
T ss_pred hhccc
Confidence 66666
No 286
>cd03353 LbH_GlmU_C N-acetyl-glucosamine-1-phosphate uridyltransferase (GlmU), C-terminal left-handed beta-helix (LbH) acetyltransferase domain: GlmU is also known as UDP-N-acetylglucosamine pyrophosphorylase. It is a bifunctional bacterial enzyme that catalyzes two consecutive steps in the formation of UDP-N-acetylglucosamine (UDP-GlcNAc), an important precursor in bacterial cell wall formation. The two enzymatic activities, uridyltransferase and acetyltransferase, are carried out by two independent domains. The C-terminal LbH domain possesses the acetyltransferase activity. It catalyzes the CoA-dependent acetylation of GlcN-1-phosphate to GlcNAc-1-phosphate. The LbH domain contains 10 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X. The acetyltransferase active site is located at the interface between two subunits of the active LbH trimer.
Probab=98.70 E-value=2.3e-07 Score=106.78 Aligned_cols=47 Identities=19% Similarity=0.355 Sum_probs=23.7
Q ss_pred eCeEECCCcEEccCCeeC-------CCcEeCCCcEEccCccccCCCccCCCcEE
Q 037878 1621 GKVEVQDNSVIGSQSLVL-------PNSVVSRDVILGALSVAPMHSVLQRGGIY 1667 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~-------~g~~ig~~~~vg~~s~v~~~~~v~~~~~~ 1667 (2280)
+.+.||++|.||.++++. .++.|||++.||.++.+..+-.+.+++..
T Consensus 118 ~~~~Ig~~~~ig~~~~~~~~~~~~~~~~vigd~~~ig~~~~i~~~~~Ig~~~~i 171 (193)
T cd03353 118 GDAEIGEGVNIGAGTITCNYDGVNKHRTVIGDNVFIGSNSQLVAPVTIGDGATI 171 (193)
T ss_pred cccEECCCCEEcCceEEeccCCccccCCEECCCeEEccCCEEeCCcEECCCcEE
Confidence 345566666666655442 24455555555555554443334444433
No 287
>cd04650 LbH_FBP Ferripyochelin Binding Protein (FBP): FBP is an outer membrane protein which plays a role in iron acquisition. It binds iron when it is complexed with pyochelin. It adopts the left-handed parallel beta-helix (LbH) structure, and contains imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. Acyltransferase activity has not been observed in this group.
Probab=98.70 E-value=1.8e-07 Score=102.68 Aligned_cols=70 Identities=21% Similarity=0.335 Sum_probs=54.8
Q ss_pred eeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcE-EccCc
Q 037878 1575 KIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVI-LGALS 1653 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~-vg~~s 1653 (2280)
.||+++.|+..+.+. .+.||++|.|+.++.+. ..++||+++++|.++.+.+|..|+++++ .|..+
T Consensus 63 ~Ig~~~~I~~~~~i~---~~~Ig~~~~Ig~~~~i~-----------~~~~Ig~~~~vg~~~~v~~g~~i~~~~v~~G~pa 128 (154)
T cd04650 63 EIGDYVTIGHNAVVH---GAKVGNYVIVGMGAILL-----------NGAKIGDHVIIGAGAVVTPGKEIPDYSLVLGVPA 128 (154)
T ss_pred EECCCCEECCCcEEE---CcEECCCCEEcCCCEEe-----------CCCEECCCCEECCCCEECCCcEeCCCCEEeccCc
Confidence 456666665544332 26899999999998884 4568999999999999999999999999 66767
Q ss_pred cccCC
Q 037878 1654 VAPMH 1658 (2280)
Q Consensus 1654 ~v~~~ 1658 (2280)
.+.++
T Consensus 129 ~~~~~ 133 (154)
T cd04650 129 KVVRK 133 (154)
T ss_pred eEecc
Confidence 77666
No 288
>PRK14356 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.69 E-value=1.1e-07 Score=125.12 Aligned_cols=62 Identities=16% Similarity=0.374 Sum_probs=37.7
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCee-------CCCcEeCCCcEEccCccccCCCccCCCcE
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLV-------LPNSVVSRDVILGALSVAPMHSVLQRGGI 1666 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v-------~~g~~ig~~~~vg~~s~v~~~~~v~~~~~ 1666 (2280)
+.|++++.+++++.+ +.+.||+++.||.+++. ..+++|||++.+|+++.+..+-.|.++++
T Consensus 357 ~~i~~~~~i~~~~~i------------g~~~ig~~~~Ig~~~~~~~~~~~~~~~~~igd~~~ig~~~~i~~~~~ig~~~~ 424 (456)
T PRK14356 357 AVLGKGAKANHLTYL------------GDAEIGAGANIGAGTITCNYDGVNKHRTVIGEGAFIGSNTALVAPVTIGDGAL 424 (456)
T ss_pred eEecCCcEecccccc------------cCeEECCCCEECCCceeeccccccCCCCEECCCcEEcCCCEEeCCcEECCCCE
Confidence 345555555555444 56678888888777654 13467777777777777665544444444
Q ss_pred E
Q 037878 1667 Y 1667 (2280)
Q Consensus 1667 ~ 1667 (2280)
.
T Consensus 425 i 425 (456)
T PRK14356 425 V 425 (456)
T ss_pred E
Confidence 4
No 289
>PRK10191 putative acyl transferase; Provisional
Probab=98.69 E-value=7e-08 Score=103.33 Aligned_cols=90 Identities=18% Similarity=0.201 Sum_probs=66.8
Q ss_pred CEECCCcEECcc-ccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCC
Q 037878 1318 AKLGSSVLLDTV-DITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQ 1396 (2280)
Q Consensus 1318 a~Ig~~v~i~~~-~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s 1396 (2280)
|+||+++.|+.. .......++|||+|.|+++|.|+.+. ....+.++||++|+||+++++.++++||+++.||++|
T Consensus 48 a~Ig~~~~I~~g~~i~I~~~~~IGd~~~I~h~v~IG~~~----~~~~~~~~IGd~~~Ig~~~~I~~~v~IG~~~~Igags 123 (146)
T PRK10191 48 ATIGRRFTIHHGYAVVINKNVVAGDDFTIRHGVTIGNRG----ADNMACPHIGNGVELGANVIILGDITIGNNVTVGAGS 123 (146)
T ss_pred CEECCCeEECCCCeEEECCCcEECCCCEECCCCEECCCC----cCCCCCCEECCCcEEcCCCEEeCCCEECCCCEECCCC
Confidence 566666666431 22234456778888888777776442 2234677999999999999999999999999999999
Q ss_pred cc----CCCCccccCCCcee
Q 037878 1397 KS----EGGKPILKSTNANY 1412 (2280)
Q Consensus 1397 ~v----~~~~~~~~g~p~~~ 1412 (2280)
+| +++..+ .|.|++.
T Consensus 124 ~V~~dv~~~~~v-~G~pA~~ 142 (146)
T PRK10191 124 VVLDSVPDNALV-VGEKARV 142 (146)
T ss_pred EECCccCCCcEE-EccCcEE
Confidence 98 556666 6788864
No 290
>COG1043 LpxA Acyl-[acyl carrier protein]
Probab=98.69 E-value=6.5e-08 Score=106.51 Aligned_cols=86 Identities=14% Similarity=0.207 Sum_probs=67.0
Q ss_pred eeCCCceeccCCccc-----CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1575 KIGRYCSIRAINPVS-----CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~-----~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.||+++.|...+++. ....+.||||+.|=..+.|+ ..|+||++|.+.|++++..+++|||.++|
T Consensus 83 ~IG~~n~IRE~vTi~~GT~~g~g~T~IGdnnl~May~HVA-----------HDC~iGn~~ilaNnatLAGHV~igD~aii 151 (260)
T COG1043 83 IIGDNNTIREFVTIHRGTVQGGGVTRIGDNNLIMAYAHVA-----------HDCVIGNNCILANNATLAGHVEVGDYAII 151 (260)
T ss_pred EECCCCeEeeEEEEeccccCCceeEEECCCCEEEEeeeee-----------ccceecCcEEEecCCeEeccEEECCEEEE
Confidence 588888886654443 23578888887776666664 66899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
|.+|.|-.=-+|-+.+...|--
T Consensus 152 GG~saVHQFvrIG~~amiGg~S 173 (260)
T COG1043 152 GGLSAVHQFVRIGAHAMIGGLS 173 (260)
T ss_pred cCcceEEEEEEEcchheecccc
Confidence 9999997654466777766654
No 291
>PLN02172 flavin-containing monooxygenase FMO GS-OX
Probab=98.68 E-value=1.1e-07 Score=123.20 Aligned_cols=45 Identities=27% Similarity=0.478 Sum_probs=40.8
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
+++..++|+|||||+|||+||.+|+++|+ +|+||||++.+||...
T Consensus 6 ~~~~~~~VaIIGAG~aGL~aA~~l~~~G~-~v~vfE~~~~vGG~W~ 50 (461)
T PLN02172 6 NPINSQHVAVIGAGAAGLVAARELRREGH-TVVVFEREKQVGGLWV 50 (461)
T ss_pred cCCCCCCEEEECCcHHHHHHHHHHHhcCC-eEEEEecCCCCcceee
Confidence 45567899999999999999999999999 6999999999999664
No 292
>PRK14352 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.68 E-value=1.7e-07 Score=123.76 Aligned_cols=79 Identities=16% Similarity=0.321 Sum_probs=44.7
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCCC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSRD 1646 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~~ 1646 (2280)
+.||+++.++..+.+ ..+.||+++.|++.+.+ +.+.||++|+||.++++.. ++.||++
T Consensus 341 ~vIg~~~~ig~~~~~---~~~~I~~~~~i~~~~~i------------~~~~Ig~~~~IG~~~~i~~~~~~~~~~~~IGd~ 405 (482)
T PRK14352 341 TVLGEEGKLGAFVET---KNATIGRGTKVPHLTYV------------GDADIGEHSNIGASSVFVNYDGVNKHRTTIGSH 405 (482)
T ss_pred cEEcCCCEECCcEEE---cccEECCCcEEccCcee------------cccEECCCcEECCCcEEeccccccCCCCeECCC
Confidence 455555555543211 12445555555444433 4556777777777766652 3667777
Q ss_pred cEEccCccccCCCccCCCcEE
Q 037878 1647 VILGALSVAPMHSVLQRGGIY 1667 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~ 1667 (2280)
+.||.++.+..+-.|.+++..
T Consensus 406 ~~iG~~~~i~~~~~Ig~~~~i 426 (482)
T PRK14352 406 VRTGSDTMFVAPVTVGDGAYT 426 (482)
T ss_pred cEECCCCEEeCCCEECCCcEE
Confidence 777777776665555555443
No 293
>PRK14353 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.67 E-value=1.5e-07 Score=123.64 Aligned_cols=62 Identities=16% Similarity=0.333 Sum_probs=36.4
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCee-------CCCcEeCCCcEEccCccccCCCccCCCcE
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLV-------LPNSVVSRDVILGALSVAPMHSVLQRGGI 1666 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v-------~~g~~ig~~~~vg~~s~v~~~~~v~~~~~ 1666 (2280)
+.|++++.+++++.+ +.+.||++|.||+++++ ..++.||+++.||+++++..+-.|.++++
T Consensus 339 ~~i~~~~~i~~~~~i------------~~~~ig~~~~Ig~~~~~~~~~~~~~~~~~Ig~~~~ig~~~~i~~~~~Ig~~~~ 406 (446)
T PRK14353 339 AKLGEGAKVNHLTYI------------GDATIGAGANIGAGTITCNYDGFNKHRTEIGAGAFIGSNSALVAPVTIGDGAY 406 (446)
T ss_pred eEECCCCEECCeeEE------------cCcEEcCCcEECCceeeeccccccCCCcEECCCcEECCCCEEeCCCEECCCCE
Confidence 455555555555444 33456666666666655 33566666666666666666555566555
Q ss_pred E
Q 037878 1667 Y 1667 (2280)
Q Consensus 1667 ~ 1667 (2280)
.
T Consensus 407 i 407 (446)
T PRK14353 407 I 407 (446)
T ss_pred E
Confidence 5
No 294
>PRK13627 carnitine operon protein CaiE; Provisional
Probab=98.66 E-value=2e-07 Score=105.69 Aligned_cols=63 Identities=16% Similarity=0.168 Sum_probs=48.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg 1650 (2280)
+.||+++.|+..+.+. .+.||++|+||.++.+. ..++||+++.||++++|.+++.+++++++.
T Consensus 72 siIg~~~~Ig~~a~i~---g~vIG~~v~IG~ga~V~-----------~g~~IG~~s~Vgags~V~~~~~ip~~~~~~ 134 (196)
T PRK13627 72 TIVGENGHIGHGAILH---GCVIGRDALVGMNSVIM-----------DGAVIGEESIVAAMSFVKAGFQGEKRQLLM 134 (196)
T ss_pred CEECCCCEECCCcEEe---eEEECCCCEECcCCccC-----------CCcEECCCCEEcCCCEEeCCcCcCCCcEEE
Confidence 3566666666654332 37899999999988874 446899999999999999999998887664
No 295
>cd03350 LbH_THP_succinylT 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (also called THP succinyltransferase): THDP N-succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA. It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is homotrimeric and each subunit contains an N-terminal region with alpha helices and hairpin loops, as well as a C-terminal region with a left-handed parallel alpha-helix (LbH) structural motif encoded by hexapeptide repeat motifs.
Probab=98.65 E-value=2e-07 Score=100.80 Aligned_cols=86 Identities=17% Similarity=0.164 Sum_probs=60.5
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|...+. ..+.++||++|+|+.++.|+.... ....++++||++|+||.+++|.+|++||++++||++|
T Consensus 32 ~~IG~~~~I~~~~~--I~~~~~IG~~~~I~~~~~igg~~~---~~~~~~v~Ig~~~~Ig~~a~I~~gv~Ig~~~~Ig~g~ 106 (139)
T cd03350 32 AYVDEGTMVDSWAT--VGSCAQIGKNVHLSAGAVIGGVLE---PLQATPVIIEDDVFIGANCEVVEGVIVGKGAVLAAGV 106 (139)
T ss_pred CEECCCeEEcCCCE--ECCCCEECCCCEECCCCEECCccc---ccccCCeEECCCCEECCCCEECCCCEECCCCEEcCCC
Confidence 34555555544321 122366777777777777643211 1234678999999999999999999999999999999
Q ss_pred cccCCCccCCC
Q 037878 1654 VAPMHSVLQRG 1664 (2280)
Q Consensus 1654 ~v~~~~~v~~~ 1664 (2280)
.|.++..+.++
T Consensus 107 ~V~~~~~I~~~ 117 (139)
T cd03350 107 VLTQSTPIYDR 117 (139)
T ss_pred EEcCCeEeccc
Confidence 99988555554
No 296
>PRK14360 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.63 E-value=2.1e-07 Score=122.39 Aligned_cols=47 Identities=19% Similarity=0.202 Sum_probs=33.2
Q ss_pred eCeEECCCcEEccCCeeCC-------CcEeCCCcEEccCccccCCCccCCCcEE
Q 037878 1621 GKVEVQDNSVIGSQSLVLP-------NSVVSRDVILGALSVAPMHSVLQRGGIY 1667 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~~-------g~~ig~~~~vg~~s~v~~~~~v~~~~~~ 1667 (2280)
+.+.||++|+||+++++.. +++||+++.||++|++..+-.+.++++.
T Consensus 364 ~~~~i~~~~~iG~~~~~~~~~~~~~~~~~Ig~~~~iG~~~~i~~~~~ig~~~~v 417 (450)
T PRK14360 364 GDATLGEQVNIGAGTITANYDGVKKHRTVIGDRSKTGANSVLVAPITLGEDVTV 417 (450)
T ss_pred CCceecCCcEECccceeccccccccCCcEeCCCeEeCCCCEEeCCcEECCCCEE
Confidence 5667888888888777643 6777777777777777766555665554
No 297
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.
Probab=98.61 E-value=1.2e-07 Score=91.43 Aligned_cols=77 Identities=29% Similarity=0.393 Sum_probs=66.4
Q ss_pred CEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCc
Q 037878 1318 AKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQK 1397 (2280)
Q Consensus 1318 a~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~ 1397 (2280)
++||+++.|++.... .+.+.||++|.|++++.|.++.... ...+++||++|+||.+++|.++++||+++.|+++|.
T Consensus 1 ~~ig~~~~i~~~~~i-~~~~~Ig~~~~I~~~~~i~~~~~~~---~~~~~~ig~~~~v~~~~~i~~~~~ig~~~~i~~~s~ 76 (78)
T cd00208 1 VFIGEGVKIHPKAVI-RGPVVIGDNVNIGPGAVIGAATGPN---EKNPTIIGDNVEIGANAVIHGGVKIGDNAVIGAGAV 76 (78)
T ss_pred CEECCCeEECCCCEE-eCcEEECCCCEECCCCEEEeccCCC---ccCCcEECCCcEECCCCEEeCCCEECCCCEECcCcE
Confidence 578999999764432 3479999999999999999887543 567899999999999999999999999999999987
Q ss_pred c
Q 037878 1398 S 1398 (2280)
Q Consensus 1398 v 1398 (2280)
|
T Consensus 77 v 77 (78)
T cd00208 77 V 77 (78)
T ss_pred e
Confidence 5
No 298
>COG3349 Uncharacterized conserved protein [Function unknown]
Probab=98.59 E-value=1.8e-07 Score=116.53 Aligned_cols=46 Identities=41% Similarity=0.676 Sum_probs=43.1
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEE 68 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~ 68 (2280)
++|+|+|||+|||+||++|+++|+ +|||+|+++++||++.+++..+
T Consensus 1 ~rVai~GaG~AgL~~a~~La~~g~-~vt~~ea~~~~GGk~~s~~~~d 46 (485)
T COG3349 1 MRVAIAGAGLAGLAAAYELADAGY-DVTLYEARDRLGGKVASWRDSD 46 (485)
T ss_pred CeEEEEcccHHHHHHHHHHHhCCC-ceEEEeccCccCceeeeeecCC
Confidence 589999999999999999999999 6999999999999999998543
No 299
>cd04647 LbH_MAT_like Maltose O-acyltransferase (MAT)-like: This family is composed of maltose O-acetyltransferase, galactoside O-acetyltransferase (GAT), xenobiotic acyltransferase (XAT) and similar proteins. MAT and GAT catalyze the CoA-dependent acetylation of the 6-hydroxyl group of their respective sugar substrates. MAT acetylates maltose and glucose exclusively while GAT specifically acetylates galactopyranosides. XAT catalyzes the CoA-dependent acetylation of a variety of hydroxyl-bearing acceptors such as chloramphenicol and streptogramin, among others. XATs are implicated in inactivating xenobiotics leading to xenobiotic resistance in patients. Members of this family contain a a left-handed parallel beta-helix (LbH) domain with at least 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). They are trimeric in their active form.
Probab=98.57 E-value=2.9e-07 Score=95.30 Aligned_cols=94 Identities=23% Similarity=0.298 Sum_probs=76.2
Q ss_pred CEECCCcEECccc-cCCCCceEECCCCEeCCCCEEeeccc--cC------CceeecCEEECCCcEECCCCEECCCCEECC
Q 037878 1318 AKLGSSVLLDTVD-ITDPSLVLIGDGAVISEGALIQSHEV--KN------GVLSFQPIKIARKVSVGPYAVIQKGSVIGE 1388 (2280)
Q Consensus 1318 a~Ig~~v~i~~~~-~~~~~~~~IG~~~~I~~~~~l~~~~~--~~------~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~ 1388 (2280)
.+||+++.|.... +...+.++||++|.|+++|.|.+... .. .....++++||++|+||.++++.+++.||+
T Consensus 2 v~Ig~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~i~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~ig~~~~i~~~~~ig~ 81 (109)
T cd04647 2 ISIGDNVYIGPGCVISAGGGITIGDNVLIGPNVTIYDHNHDIDDPERPIEQGVTSAPIVIGDDVWIGANVVILPGVTIGD 81 (109)
T ss_pred eEECCCcEECCCCEEecCCceEECCCCEECCCCEEECCCCCCCccccccccccccCCeEECCCCEECCCCEEcCCCEECC
Confidence 5789999997643 43335899999999999999986532 11 135578999999999999999999999999
Q ss_pred CCEECcCCcc----CCCCccccCCCcee
Q 037878 1389 EAEVAPLQKS----EGGKPILKSTNANY 1412 (2280)
Q Consensus 1389 ~a~ig~~s~v----~~~~~~~~g~p~~~ 1412 (2280)
++.|++++.| ++++.+ .|+||+.
T Consensus 82 ~~~i~~~~~v~~~i~~~~i~-~g~pa~~ 108 (109)
T cd04647 82 GAVVGAGSVVTKDVPPNSIV-AGNPAKV 108 (109)
T ss_pred CCEECCCCEEeeECCCCCEE-EccccEe
Confidence 9999999998 567776 6788763
No 300
>PF13738 Pyr_redox_3: Pyridine nucleotide-disulphide oxidoreductase; PDB: 3D1C_A 4A9W_B 2YLX_A 2YM2_A 2YLW_A 2YLR_A 2YM1_A 2YLS_A 1W4X_A 2YLT_A ....
Probab=98.55 E-value=4.3e-07 Score=105.85 Aligned_cols=50 Identities=20% Similarity=0.395 Sum_probs=37.6
Q ss_pred HHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcC
Q 037878 189 TSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISG 242 (2280)
Q Consensus 189 ~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~ 242 (2280)
.+.++.++++.+.+++++++|++|++++++| .+++.++ ++++||+||+|+
T Consensus 85 ~~yl~~~~~~~~l~i~~~~~V~~v~~~~~~w--~v~~~~~--~~~~a~~VVlAt 134 (203)
T PF13738_consen 85 LDYLQEYAERFGLEIRFNTRVESVRRDGDGW--TVTTRDG--RTIRADRVVLAT 134 (203)
T ss_dssp HHHHHHHHHHTTGGEETS--EEEEEEETTTE--EEEETTS---EEEEEEEEE--
T ss_pred HHHHHHHHhhcCcccccCCEEEEEEEeccEE--EEEEEec--ceeeeeeEEEee
Confidence 3467788888888899999999999999888 4556677 578999999983
No 301
>cd05636 LbH_G1P_TT_C_like Putative glucose-1-phosphate thymidylyltransferase, C-terminal Left-handed parallel beta-Helix (LbH) domain: Proteins in this family show simlarity to glucose-1-phosphate adenylyltransferases in that they contain N-terminal catalytic domains that resemble a dinucleotide-binding Rossmann fold and C-terminal LbH fold domains. Members in this family are predicted to be glucose-1-phosphate thymidylyltransferases, which are involved in the dTDP-L-rhamnose biosynthetic pathway. Glucose-1-phosphate thymidylyltransferase catalyzes the synthesis of deoxy-thymidine di-phosphate (dTDP)-L-rhamnose, an important component of the cell wall of many microorganisms. The C-terminal LbH domain contains multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=98.55 E-value=9.1e-07 Score=98.72 Aligned_cols=53 Identities=32% Similarity=0.571 Sum_probs=43.4
Q ss_pred ceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCccC
Q 037878 1336 LVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKSE 1399 (2280)
Q Consensus 1336 ~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v~ 1399 (2280)
.+.||+++.|++++.|. +++.||++|.|++++.|.+++.||+++.|++++.+.
T Consensus 17 ~v~ig~~~~I~~~a~i~-----------~~v~Ig~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~ 69 (163)
T cd05636 17 PVWIGEGAIVRSGAYIE-----------GPVIIGKGCEIGPNAYIRGYTVLGDGCVVGNSVEVK 69 (163)
T ss_pred CeEEcCCCEECCCCEEe-----------CCeEECCCCEECCCCEEcCCCEECCCCEECCCcEEe
Confidence 46688888888888776 356699999999999999889999999998887764
No 302
>PRK14354 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.53 E-value=5.4e-07 Score=118.92 Aligned_cols=81 Identities=19% Similarity=0.347 Sum_probs=57.1
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCCC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSRD 1646 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~~ 1646 (2280)
+.||++|.|+..+.+. .+.||+++.+++.+.+ +.++||++|.||.++.+.. +++|||+
T Consensus 335 ~~Ig~~~~i~~~~~i~---~~~i~~~~~i~~~~~~------------~~~~ig~~~~ig~~~~~~~~~~~~~~~~~igd~ 399 (458)
T PRK14354 335 SVIGEEVKIGNFVEIK---KSTIGEGTKVSHLTYI------------GDAEVGENVNIGCGTITVNYDGKNKFKTIIGDN 399 (458)
T ss_pred CEEeCCcEECCceEEe---eeEECCCCEecceeee------------cCcccCCceEEcCceeecccccccccCCEECCC
Confidence 3455555555443222 2556666666666554 6689999999999988754 6899999
Q ss_pred cEEccCccccCCCccCCCcEEec
Q 037878 1647 VILGALSVAPMHSVLQRGGIYIG 1669 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~~G 1669 (2280)
+.+|.+|.+..+..|.++++...
T Consensus 400 ~~ig~~s~i~~~~~ig~~~~v~~ 422 (458)
T PRK14354 400 AFIGCNSNLVAPVTVGDNAYIAA 422 (458)
T ss_pred cEEccCCEEeCCcEECCCCEECC
Confidence 99999999887766777777643
No 303
>PRK14357 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.53 E-value=4.3e-07 Score=119.41 Aligned_cols=50 Identities=16% Similarity=0.262 Sum_probs=39.3
Q ss_pred eCeEECCCcEEccCCeeC-------CCcEeCCCcEEccCccccCCCccCCCcEEecC
Q 037878 1621 GKVEVQDNSVIGSQSLVL-------PNSVVSRDVILGALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~-------~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
+.++||++|.||+++++. .+++|||++.||.++.|..+-.|.+++...+.
T Consensus 357 ~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~Igd~~~ig~~~~i~~gv~Ig~~~~i~ag 413 (448)
T PRK14357 357 GDATVGKNVNIGAGTITCNYDGKKKNPTFIEDGAFIGSNSSLVAPVRIGKGALIGAG 413 (448)
T ss_pred cCcEECCCcEECCCcccccccccccCCcEECCCCEECCCCEEeCCcEECCCCEEcCC
Confidence 567899999999988764 36889999999999988877666777666544
No 304
>cd00208 LbetaH Left-handed parallel beta-Helix (LbetaH or LbH) domain: The alignment contains 5 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity, however, some subfamilies in this hierarchy also show activities related to ion transport or translation initiation. Many are trimeric in their active forms.
Probab=98.49 E-value=3.5e-07 Score=88.23 Aligned_cols=78 Identities=15% Similarity=0.194 Sum_probs=69.1
Q ss_pred CeeeccCcEEEccceeeecCceeEEecCceEECCCceEeeecccCCCcceEeeeEEEccCeEEccceeEcCCcEeCCCce
Q 037878 2185 AEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFGHIYEGDGGKVKFGKIRIGEGGFVGSRAAAMPGVRIENGGS 2264 (2280)
Q Consensus 2185 ~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~ 2264 (2280)
++|| +++.++..+.+.. .+.|| +++.|+++|.+..+... + ...+++||++++||.+|++.++++||++++
T Consensus 1 ~~ig--~~~~i~~~~~i~~--~~~Ig-~~~~I~~~~~i~~~~~~--~---~~~~~~ig~~~~v~~~~~i~~~~~ig~~~~ 70 (78)
T cd00208 1 VFIG--EGVKIHPKAVIRG--PVVIG-DNVNIGPGAVIGAATGP--N---EKNPTIIGDNVEIGANAVIHGGVKIGDNAV 70 (78)
T ss_pred CEEC--CCeEECCCCEEeC--cEEEC-CCCEECCCCEEEeccCC--C---ccCCcEECCCcEECCCCEEeCCCEECCCCE
Confidence 4677 9999999877744 79999 99999999999998765 2 568899999999999999999999999999
Q ss_pred ecccceee
Q 037878 2265 LSSLSLAM 2272 (2280)
Q Consensus 2265 ~~~~s~~~ 2272 (2280)
|+++|+++
T Consensus 71 i~~~s~v~ 78 (78)
T cd00208 71 IGAGAVVT 78 (78)
T ss_pred ECcCcEeC
Confidence 99999875
No 305
>TIGR03535 DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. Alternate name: tetrahydrodipicolinate N-succinyltransferase.
Probab=98.47 E-value=3.3e-07 Score=105.70 Aligned_cols=83 Identities=17% Similarity=0.208 Sum_probs=54.5
Q ss_pred cCCeeCCCceeccCCccc--------------CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCee
Q 037878 1572 LGAKIGRYCSIRAINPVS--------------CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLV 1637 (2280)
Q Consensus 1572 lG~~IG~~~~i~~~~~~~--------------~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v 1637 (2280)
+||.||+++.|.....+. +.|.+.|||+|+|+.++.|++.. .++ ...+++||++||||.+|.|
T Consensus 164 lGAyLGeGtvVm~~a~VN~nAgtIG~~iI~g~I~HdvvIGd~~~IgpGvsI~G~L-sGg--~~~pV~IGe~~~IGagA~I 240 (319)
T TIGR03535 164 LGAHLAEGTTVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTL-SGG--GKEVISIGERCLLGANSGL 240 (319)
T ss_pred eccEECCCCEEcCCCEEccCceEecCceEEEEEccCCEECCCCEECCCceeccee-cCC--CcccEEECCCcEECCCCEE
Confidence 467777766665433221 13344444444444444442111 111 1245999999999999999
Q ss_pred CCCcEeCCCcEEccCccccCCC
Q 037878 1638 LPNSVVSRDVILGALSVAPMHS 1659 (2280)
Q Consensus 1638 ~~g~~ig~~~~vg~~s~v~~~~ 1659 (2280)
|+.||++|+||+|++|+++.
T Consensus 241 --GI~IGd~~VVGAGaVVtkgT 260 (319)
T TIGR03535 241 --GISLGDDCVVEAGLYVTAGT 260 (319)
T ss_pred --CeEECCCCEECCCCEEeCCe
Confidence 99999999999999999984
No 306
>TIGR00031 UDP-GALP_mutase UDP-galactopyranose mutase. The gene is known as glf, ceoA, and rfbD. It is known experimentally in E. coli, Mycobacterium tuberculosis, and Klebsiella pneumoniae.
Probab=98.46 E-value=2.4e-07 Score=115.61 Aligned_cols=45 Identities=38% Similarity=0.461 Sum_probs=41.2
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeec
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIE 67 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~ 67 (2280)
.||+|||||+|||++|++|++.|. +|+|+|+++++||.|.+...+
T Consensus 2 ~DvvIIGaG~aGlsaA~~La~~G~-~V~viEk~~~iGG~~~~~~~~ 46 (377)
T TIGR00031 2 FDYIIVGAGLSGIVLANILAQLNK-RVLVVEKRNHIGGNCYDEVDE 46 (377)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCCCCCceeeecCC
Confidence 589999999999999999999998 699999999999999886543
No 307
>TIGR03532 DapD_Ac 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase. Alternate name: tetrahydrodipicolinate N-acetyltransferase. Note that IUBMB lists this alternate name as the accepted name. Unfortunately, the related succinyl transferase acting on the same substrate (EC:2.3.1.117, TIGR00695) uses the opposite standard. We have decided to give these two enzymes names which more clearly indicated that they act on the same substrate.
Probab=98.46 E-value=5.2e-07 Score=105.27 Aligned_cols=96 Identities=20% Similarity=0.282 Sum_probs=64.6
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCc------eee---------cCEEECCCcEECCCCEEC
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGV------LSF---------QPIKIARKVSVGPYAVIQ 1381 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~------~~~---------~~i~Ig~~~~iG~~~~i~ 1381 (2280)
++.||+++.|....... ..+.||++|.|++++.|.+...-++. ..+ +.+.||++|+||++++|.
T Consensus 98 ~v~IG~~~~I~~~~~I~-~~~~IG~~~~I~~~a~I~~~s~Ig~~~~Ig~~~~I~~~~~~~~~~~v~IGd~v~IG~gsvI~ 176 (231)
T TIGR03532 98 QVIIGDNAVIMMGAVIN-IGAEIGEGTMIDMNAVLGGRATVGKNVHIGAGAVLAGVIEPPSAKPVVIEDNVLIGANAVIL 176 (231)
T ss_pred CeEECCCCEEecCcccC-CCeEECCCCEEccccccCCCcEECCCcEEcCCcEEccccccccCCCeEECCCcEECCCCEEc
Confidence 35555555554322211 23455665555555555322221111 112 368999999999999999
Q ss_pred CCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1382 KGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1382 pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
+|++||+++.|+++|+| ++++.+ .|+||+...
T Consensus 177 ~g~~Ig~~~~IgagsvV~~di~~~~vv-~G~PA~~i~ 212 (231)
T TIGR03532 177 EGVRVGKGAVVAAGAIVTEDVPPNTVV-AGVPAKVIK 212 (231)
T ss_pred CCCEECCCCEECCCCEEccccCCCcEE-EecCCEEec
Confidence 99999999999999998 677777 899999874
No 308
>PF01266 DAO: FAD dependent oxidoreductase; InterPro: IPR006076 This entry includes various FAD dependent oxidoreductases: Glycerol-3-phosphate dehydrogenase (1.1.99.5 from EC), Sarcosine oxidase beta subunit (1.5.3.1 from EC), D-alanine oxidase (1.4.99.1 from EC), D-aspartate oxidase (1.4.3.1 from EC). D-amino acid oxidase (1.4.3.3 from EC) (DAMOX or DAO) is an FAD flavoenzyme that catalyzes the oxidation of neutral and basic D-amino acids into their corresponding keto acids. DAOs have been characterised and sequenced in fungi and vertebrates where they are known to be located in the peroxisomes. D-aspartate oxidase (1.4.3.1 from EC) (DASOX) [] is an enzyme, structurally related to DAO, which catalyzes the same reaction but is active only toward dicarboxylic D-amino acids. In DAO, a conserved histidine has been shown [] to be important for the enzyme's catalytic activity.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2RGO_A 3NYE_A 3NYF_A 3NYC_A 3SM8_A 3SGL_A 3PVC_A 3DME_A 2GAH_B 3NLC_A ....
Probab=98.46 E-value=1.3e-06 Score=111.53 Aligned_cols=58 Identities=28% Similarity=0.405 Sum_probs=43.6
Q ss_pred eEEEEcCC---HHHHHHHHHh---HCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 180 KIRRFKGG---YTSLWQKLSK---YLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 180 ~~~~~~gG---~~~l~~~la~---~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
.++...+| ...+.+.+.+ +.|++|+.+++|++|..+++++ ..|++++| + +++|+||+|
T Consensus 135 ~~~~~~~g~i~~~~l~~~l~~~~~~~Gv~i~~~~~V~~i~~~~~~v-~gv~~~~g--~-i~ad~vV~a 198 (358)
T PF01266_consen 135 GVFFPEGGVIDPRRLIQALAAEAQRAGVEIRTGTEVTSIDVDGGRV-TGVRTSDG--E-IRADRVVLA 198 (358)
T ss_dssp EEEETTEEEEEHHHHHHHHHHHHHHTT-EEEESEEEEEEEEETTEE-EEEEETTE--E-EEECEEEE-
T ss_pred hhcccccccccccchhhhhHHHHHHhhhhccccccccchhhccccc-cccccccc--c-cccceeEec
Confidence 44455555 5667777664 4589999999999999999865 23888888 4 999999998
No 309
>PRK14359 glmU bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase; Provisional
Probab=98.46 E-value=9.5e-07 Score=115.63 Aligned_cols=69 Identities=19% Similarity=0.276 Sum_probs=52.7
Q ss_pred CCeeCCCceeccCCcccC-----CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCc
Q 037878 1573 GAKIGRYCSIRAINPVSC-----PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDV 1647 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~-----~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~ 1647 (2280)
.+.||++|.|+..+.+.. .+.++|||+|+||.++.|. ..++||++++||++++|..+ |.+++
T Consensus 342 d~~Ig~~~~ig~~~~~~~~~~~~~~~~~ig~~~~ig~~~~i~-----------~~~~ig~~~~i~~g~~v~~~--v~~~~ 408 (430)
T PRK14359 342 DCEIDEGTNIGAGTITCNYDGKKKHKTIIGKNVFIGSDTQLV-----------APVNIEDNVLIAAGSTVTKD--VPKGS 408 (430)
T ss_pred CCEECCCCEECCCceEccccCccCcCCEECCCeEEcCCCEEe-----------CCcEECCCCEECCCCEEccc--cCCCc
Confidence 467888888887643321 2358999999999999885 67899999999999999975 57777
Q ss_pred EEccCcc
Q 037878 1648 ILGALSV 1654 (2280)
Q Consensus 1648 ~vg~~s~ 1654 (2280)
++..++-
T Consensus 409 ~~~~~~~ 415 (430)
T PRK14359 409 LAISRAP 415 (430)
T ss_pred EEEeccC
Confidence 6654443
No 310
>cd04649 LbH_THP_succinylT_putative Putative 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate (THDP) N-succinyltransferase (THP succinyltransferase), C-terminal left-handed parallel alpha-helix (LbH) domain: This group is composed of mostly uncharacterized proteins containing an N-terminal domain of unknown function and a C-terminal LbH domain with similarity to THP succinyltransferase LbH. THP succinyltransferase catalyzes the conversion of tetrahydrodipicolinate and succinyl-CoA to N-succinyltetrahydrodipicolinate and CoA. It is the committed step in the succinylase pathway by which bacteria synthesize L-lysine and meso-diaminopimelate, a component of peptidoglycan. The enzyme is trimeric and displays the left-handed parallel alpha-helix (LbH) structural motif encoded by the hexapeptide repeat motif.
Probab=98.45 E-value=5.7e-07 Score=93.96 Aligned_cols=66 Identities=21% Similarity=0.305 Sum_probs=52.9
Q ss_pred ceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCccCCCCcccc
Q 037878 1336 LVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKSEGGKPILK 1406 (2280)
Q Consensus 1336 ~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v~~~~~~~~ 1406 (2280)
.++||++|.|+++|.|... +.+ ..-.|+.||++|+||++|+| |++||++++||++++|..+++++.
T Consensus 47 ~a~Ighd~~IG~~~~I~~~-l~G--~~~~pV~IG~~~~IG~ga~I--gv~IG~~~vIGaGsvV~k~t~i~~ 112 (147)
T cd04649 47 GVIVGKGSDVGGGASIMGT-LSG--GGNNVISIGKRCLLGANSGI--GISLGDNCIVEAGLYVTAGTKVTL 112 (147)
T ss_pred CEEECCCCEECCCCEEEEE-CCC--CcccCEEECCCCEECCCCEE--eEEECCCCEECCCCEEeCCeEEEE
Confidence 3667777777777777722 222 24567999999999999999 899999999999999988887743
No 311
>cd03354 LbH_SAT Serine acetyltransferase (SAT): SAT catalyzes the CoA-dependent acetylation of the side chain hydroxyl group of L-serine to form O-acetylserine, as the first step of a two-step biosynthetic pathway in bacteria and plants leading to the formation of L-cysteine. This reaction represents a key metabolic point of regulation for the cysteine biosynthetic pathway due to its feedback inhibition by cysteine. The enzyme is a 175 kDa homohexamer, composed of a dimer of homotrimers. Each subunit contains an N-terminal alpha helical region and a C-terminal left-handed beta-helix (LbH) subdomain with 5 turns, each containing a hexapeptide repeat motif characteristic of the acyltransferase superfamily of enzymes. The trimer interface mainly involves the C-terminal LbH subdomain while the dimer (of trimers) interface is mediated by the N-terminal alpha helical subdomain.
Probab=98.45 E-value=5.6e-07 Score=91.53 Aligned_cols=92 Identities=16% Similarity=0.171 Sum_probs=58.8
Q ss_pred CCEECCCcEECccc-cCCCCceEECCCCEeCCCCEEeeccccC-Cce--eecCEEECCCcEECCCCEECCCCEECCCCEE
Q 037878 1317 GAKLGSSVLLDTVD-ITDPSLVLIGDGAVISEGALIQSHEVKN-GVL--SFQPIKIARKVSVGPYAVIQKGSVIGEEAEV 1392 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~-~~~~~~~~IG~~~~I~~~~~l~~~~~~~-~~~--~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~i 1392 (2280)
|+.|++++.|+... +..+..+.||+++.|+++|.|.....-+ +.. ..+++.||++|+||.++.+.++++||+++.|
T Consensus 2 ~~~i~~~~~ig~~~~i~~~~~~~ig~~~~Ig~~~~i~~~~~i~~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~i 81 (101)
T cd03354 2 GIDIHPGAKIGPGLFIDHGTGIVIGETAVIGDNCTIYQGVTLGGKGKGGGKRHPTIGDNVVIGAGAKILGNITIGDNVKI 81 (101)
T ss_pred ceEeCCCCEECCCEEECCCCeEEECCCCEECCCCEEcCCCEECCCccCCcCCCCEECCCcEEcCCCEEECcCEECCCCEE
Confidence 44455555554322 2112234455555555555554333222 222 4788999999999999999999999999999
Q ss_pred CcCCcc----CCCCccccCCC
Q 037878 1393 APLQKS----EGGKPILKSTN 1409 (2280)
Q Consensus 1393 g~~s~v----~~~~~~~~g~p 1409 (2280)
++++.| +++..+ .|+|
T Consensus 82 ~~~~~i~~~~~~~~~~-~G~P 101 (101)
T cd03354 82 GANAVVTKDVPANSTV-VGVP 101 (101)
T ss_pred CCCCEECcccCCCCEE-EeCC
Confidence 999998 444444 4544
No 312
>COG0579 Predicted dehydrogenase [General function prediction only]
Probab=98.45 E-value=1.1e-06 Score=109.80 Aligned_cols=43 Identities=37% Similarity=0.533 Sum_probs=39.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC--CCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLG--YRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G--~~~VtVlEk~~riGG~~~t 63 (2280)
+++||+|||||+.|+++|+.|++.+ . +|+|+||.+.+|-..++
T Consensus 2 ~~~DvvIIGgGI~G~a~a~~Ls~~~p~~-~V~llEk~~~~a~~sS~ 46 (429)
T COG0579 2 MDYDVVIIGGGIMGAATAYELSEYEPDL-SVALLEKEDGVAQESSS 46 (429)
T ss_pred CceeEEEECCcHHHHHHHHHHHHhCCCc-eEEEEEccCcccccccc
Confidence 4689999999999999999999998 7 69999999999986665
No 313
>PRK11830 dapD 2,3,4,5-tetrahydropyridine-2,6-carboxylate N-succinyltransferase; Provisional
Probab=98.41 E-value=7.7e-07 Score=104.55 Aligned_cols=86 Identities=20% Similarity=0.212 Sum_probs=62.1
Q ss_pred cCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEcc
Q 037878 1572 LGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGA 1651 (2280)
Q Consensus 1572 lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~ 1651 (2280)
.|+.||+++.|+..+ ...+.+.||++|+|+.++.|.+... .....+++||++|+||.++.|.+|++||++|+||+
T Consensus 131 iGa~Ig~gt~I~~~a--~IG~~a~IG~nv~I~~gv~I~g~~~---~~~~~~viIgDnv~IGa~s~I~~Gv~IGdgavIga 205 (272)
T PRK11830 131 IGAYVDEGTMVDTWA--TVGSCAQIGKNVHLSGGVGIGGVLE---PLQANPVIIEDNCFIGARSEVVEGVIVEEGSVLGM 205 (272)
T ss_pred CCCEECCCcEEcccc--EECCCCEECCCcEECCCccCCCCcc---ccCcCCeEEcCCCEECCCCEEcCCCEECCCCEEcC
Confidence 378899999998762 2223345555555555554432110 11335799999999999999999999999999999
Q ss_pred CccccCCCccC
Q 037878 1652 LSVAPMHSVLQ 1662 (2280)
Q Consensus 1652 ~s~v~~~~~v~ 1662 (2280)
+++|.++..+-
T Consensus 206 g~vV~~gt~I~ 216 (272)
T PRK11830 206 GVFLGQSTKIY 216 (272)
T ss_pred CCEEcCCeEEC
Confidence 99999885443
No 314
>TIGR03570 NeuD_NnaD sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family. These proteins contain repeats of the bacterial transferase hexapeptide (pfam00132), although often these do not register above the trusted cutoff.
Probab=98.39 E-value=8.9e-07 Score=102.99 Aligned_cols=92 Identities=24% Similarity=0.311 Sum_probs=68.8
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceee-------cCEEECCCcEECCCCEECCCCEECCC
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSF-------QPIKIARKVSVGPYAVIQKGSVIGEE 1389 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~-------~~i~Ig~~~~iG~~~~i~pg~~ig~~ 1389 (2280)
+++||+++.|++.... ...++||++|.|++++.|......++...+ +.++||++|+||++++|.+|++||++
T Consensus 99 ~~~ig~~~~i~~~~~i-~~~~~ig~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~~ig~~~~ig~~~~v~~~~~i~~~ 177 (201)
T TIGR03570 99 SASIGEGTVIMAGAVI-NPDVRIGDNVIINTGAIVEHDCVIGDYVHIAPGVTLSGGVVIGEGVFIGAGATIIQGVTIGAG 177 (201)
T ss_pred CCEECCCCEECCCCEE-CCCCEECCCcEECCCCEEcCCCEECCCCEECCCCEEeCCcEECCCCEECCCCEEeCCCEECCC
Confidence 4677777777643332 235778888888877777654444433333 37899999999999999999999999
Q ss_pred CEECcCCcc----CCCCccccCCCc
Q 037878 1390 AEVAPLQKS----EGGKPILKSTNA 1410 (2280)
Q Consensus 1390 a~ig~~s~v----~~~~~~~~g~p~ 1410 (2280)
++|+++|+| ++++.| .|+||
T Consensus 178 ~~i~~~~~v~~~~~~~~~~-~g~pa 201 (201)
T TIGR03570 178 AIVGAGAVVTKDIPDGGVV-VGVPA 201 (201)
T ss_pred CEECCCCEECCcCCCCCEE-EeccC
Confidence 999999997 667777 77775
No 315
>TIGR03535 DapD_actino 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. Alternate name: tetrahydrodipicolinate N-succinyltransferase.
Probab=98.36 E-value=9.5e-07 Score=102.03 Aligned_cols=86 Identities=23% Similarity=0.332 Sum_probs=57.9
Q ss_pred HcCCEECCCcEECccccCCCC---------------ceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCE
Q 037878 1315 MLGAKLGSSVLLDTVDITDPS---------------LVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAV 1379 (2280)
Q Consensus 1315 ~lGa~Ig~~v~i~~~~~~~~~---------------~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~ 1379 (2280)
.+||.||+++.|....+..++ .+.|||+|.|++++.|.|-. .++ .-.||+||++|+||++|.
T Consensus 163 RlGAyLGeGtvVm~~a~VN~nAgtIG~~iI~g~I~HdvvIGd~~~IgpGvsI~G~L-sGg--~~~pV~IGe~~~IGagA~ 239 (319)
T TIGR03535 163 RLGAHLAEGTTVMHEGFVNFNAGTLGASMVEGRISAGVVVGDGSDIGGGASIMGTL-SGG--GKEVISIGERCLLGANSG 239 (319)
T ss_pred eeccEECCCCEEcCCCEEccCceEecCceEEEEEccCCEECCCCEECCCceeccee-cCC--CcccEEECCCcEECCCCE
Confidence 478888888888432221111 23344555555555443321 111 023699999999999999
Q ss_pred ECCCCEECCCCEECcCCccCCCCccc
Q 037878 1380 IQKGSVIGEEAEVAPLQKSEGGKPIL 1405 (2280)
Q Consensus 1380 i~pg~~ig~~a~ig~~s~v~~~~~~~ 1405 (2280)
| |..||++|+||+|++|-.++++.
T Consensus 240 I--GI~IGd~~VVGAGaVVtkgT~v~ 263 (319)
T TIGR03535 240 L--GISLGDDCVVEAGLYVTAGTKVT 263 (319)
T ss_pred E--CeEECCCCEECCCCEEeCCeEEE
Confidence 9 99999999999999998888873
No 316
>PF04443 LuxE: Acyl-protein synthetase, LuxE; InterPro: IPR007534 LuxE is an acyl-protein synthetase found in bioluminescent bacteria. LuxE catalyses the formation of an acyl-protein thiolester from a fatty acid and a protein. This is the second step in the bioluminescent fatty acid reduction system, which converts tetradecanoic acid to the aldehyde substrate of the luciferase-catalysed bioluminescence reaction []. A conserved cysteine found at position 364 in Photobacterium phosphoreum LuxE (Q52100 from SWISSPROT) is thought to be acylated during the transfer of the acyl group from the synthetase subunit to the reductase. The C-terminal of the synthetase is though to act as a flexible arm to transfer acyl groups between the sites of activation and reduction []. A LuxE domain is also found in the Vibrio cholerae RBFN protein (Q06961 from SWISSPROT), which is involved in the biosynthesis of the O-antigen component 3-deoxy-L-glycero-tetronic acid. This entry represents the LuxE domain, which is found in archaeal and bacterial proteins.; GO: 0047474 long-chain fatty acid luciferin component ligase activity, 0008218 bioluminescence
Probab=98.34 E-value=3.3e-05 Score=96.37 Aligned_cols=233 Identities=20% Similarity=0.238 Sum_probs=131.8
Q ss_pred CCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHc---CCCCC--cEEEEEcCchhhhh----HHHHHHHHHHccc
Q 037878 633 QPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRY---KSTSK--TVLVSWLPQYHDMG----LIGGLFTAMVGGS 703 (2280)
Q Consensus 633 ~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~---~~~~~--d~~l~~~pl~h~~g----l~~~i~~~L~~G~ 703 (2280)
.++++..++-||||||.|-=+.+.+..+..........+ ..... -.++...|-..... ........+..+.
T Consensus 87 ~~e~~~~~~tSSGTtG~~S~i~~D~~t~~~~~~~~~~~~~~~~~~~~~~~~il~l~p~~~~~~~~~~~~~~~~~~~~~~~ 166 (365)
T PF04443_consen 87 PEEEVEKVFTSSGTTGQPSRIFRDRETAERQQKSLNKIFQHFLGPSRLPMLILDLSPSPENRNSFSARYAGILGELFFGS 166 (365)
T ss_pred ChhhheeEEECCCCCCCCcEEEECHHHHHHHHHHHHHHHHhhcccccCCeEEEEecCCcccccchHHHHHHHHhhcccCc
Confidence 346677888999999998656666655555544433332 22222 12333334322111 1112222333444
Q ss_pred eEEEeCccccccCHHHHHHHH----hhcceeeecCcHHHHHHHHHHHhcccccccccCCC-CccEEEEec------CCCC
Q 037878 704 TAILFSPLTFIKNPLLWLETM----SKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLS-SMKFLMVAA------EPVR 772 (2280)
Q Consensus 704 ~~vl~~~~~~~~~p~~l~~~i----~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~-~Lr~l~~gG------e~l~ 772 (2280)
. .......+ |...+.+.+ .+.++..+.+.|+++-.++..++..... ..|+ ..+.+-.|| |.++
T Consensus 167 ~-~~l~~~~l--d~~~~~~~L~~~~~~~~pv~l~Gftf~~~~~~~~l~~~~~~---~~L~~~s~vi~~GGwK~~~~e~v~ 240 (365)
T PF04443_consen 167 R-FALDNDEL--DLEGLIEALFRAEHSGEPVLLFGFTFFIWFLLDELEERGIR---FRLPKGSIVIHGGGWKGRRKEAVS 240 (365)
T ss_pred e-eeecCCcc--CHHHHHHHHHHHHhCCCCEEEECchHHHHHHHHHHHhcCCc---ccCCCCCEEEeCCCCCccccCccC
Confidence 4 34444333 555444433 4556777888887766566555554322 3444 355555555 4565
Q ss_pred H-HHHHHHHHHhcCCCC-CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccC
Q 037878 773 Q-TTVKRFVELTRPFGL-SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIG 850 (2280)
Q Consensus 773 ~-~l~~~~~~~~~~~g~-~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~ 850 (2280)
. +..+.+.+. +|+ +...+++.||+||.....+.... --.+.|-+ +.|.||++. .++
T Consensus 241 r~ef~~~l~~~---~Gv~~~~~i~~~ygmtEl~s~~~~~~~-----------------~~~~~p~w-V~iRDp~tl-~~~ 298 (365)
T PF04443_consen 241 REEFYARLQEV---FGVIPIENIYDMYGMTELNSQAYECGH-----------------GHFHVPPW-VIIRDPETL-EPL 298 (365)
T ss_pred HHHHHHHHHHH---HCCCCHHHeeeeeeccccchhheeCCC-----------------CcccCCCe-EEEECCCCC-cCC
Confidence 4 444444444 355 56689999999997654332110 00133555 888899875 556
Q ss_pred CCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-C---C-----eEEEEecCCC
Q 037878 851 EPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-D---G-----KFFITGRIKD 914 (2280)
Q Consensus 851 p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-d---G-----~l~~~GR~dd 914 (2280)
|.|+.|-|-+-.+.... |- +..-|.|+|.+. + | ++.++||.+.
T Consensus 299 ~~Ge~Gli~vidl~~~s-~p--------------------~~IlTeDlGvl~~~~~c~cr~g~~f~vlGR~~~ 350 (365)
T PF04443_consen 299 PPGETGLIQVIDLANTS-YP--------------------GFILTEDLGVLHGDDDCGCRKGKYFEVLGRADG 350 (365)
T ss_pred CCCCeeEEEEEcccccC-CC--------------------cEEEEcceeeecCCCCCCCccCCEEEEEeCCCC
Confidence 89999999886553211 21 346699999874 2 2 7999999884
No 317
>PF00743 FMO-like: Flavin-binding monooxygenase-like; InterPro: IPR020946 Flavin-containing monooxygenases (FMOs) constitute a family of xenobiotic-metabolising enzymes []. Using an NADPH cofactor and FAD prosthetic group, these microsomal proteins catalyse the oxygenation of nucleophilic nitrogen, sulphur, phosphorous and selenium atoms in a range of structurally diverse compounds. FMOs have been implicated in the metabolism of a number of pharmaceuticals, pesticides and toxicants. In man, lack of hepatic FMO-catalysed trimethylamine metabolism results in trimethylaminuria (fish odour syndrome). Five mammalian forms of FMO are now known and have been designated FMO1-FMO5 [, , , , ]. This is a recent nomenclature based on comparison of amino acid sequences, and has been introduced in an attempt to eliminate confusion inherent in multiple, laboratory-specific designations and tissue-based classifications []. Following the determination of the complete nucleotide sequence of Saccharomyces cerevisiae (Baker's yeast) [], a novel gene was found to encode a protein with similarity to mammalian monooygenases.; GO: 0004499 flavin-containing monooxygenase activity, 0050660 flavin adenine dinucleotide binding, 0050661 NADP binding, 0055114 oxidation-reduction process; PDB: 2GVC_E 1VQW_B 2GV8_B 2XVI_B 2XVH_B 2XLS_A 2XLR_A 2XLU_D 2XLP_B 2XVE_A ....
Probab=98.34 E-value=1.3e-06 Score=114.70 Aligned_cols=37 Identities=43% Similarity=0.785 Sum_probs=32.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
++|+|||||+|||+||..|.+.|+ +|++|||++.+||
T Consensus 2 krVaVIGaG~sGL~a~k~l~e~g~-~~~~fE~~~~iGG 38 (531)
T PF00743_consen 2 KRVAVIGAGPSGLAAAKNLLEEGL-EVTCFEKSDDIGG 38 (531)
T ss_dssp -EEEEE--SHHHHHHHHHHHHTT--EEEEEESSSSSSG
T ss_pred CEEEEECccHHHHHHHHHHHHCCC-CCeEEecCCCCCc
Confidence 689999999999999999999999 7999999999999
No 318
>KOG1399 consensus Flavin-containing monooxygenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.34 E-value=2.8e-06 Score=107.75 Aligned_cols=44 Identities=27% Similarity=0.660 Sum_probs=39.6
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
++..++|+|||||+|||+||..|.+.|+ +|+|+||++.+||.-+
T Consensus 3 ~~~~~~vaIIGAG~sGL~~ar~l~~~g~-~v~vfEr~~~iGGlW~ 46 (448)
T KOG1399|consen 3 MMMSKDVAVIGAGPAGLAAARELLREGH-EVVVFERTDDIGGLWK 46 (448)
T ss_pred cCCCCceEEECcchHHHHHHHHHHHCCC-CceEEEecCCccceEe
Confidence 3457899999999999999999999999 6999999999999443
No 319
>COG2171 DapD Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism]
Probab=98.33 E-value=6.1e-07 Score=101.55 Aligned_cols=66 Identities=21% Similarity=0.315 Sum_probs=52.1
Q ss_pred ceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCccCCCCcc
Q 037878 1336 LVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKSEGGKPI 1404 (2280)
Q Consensus 1336 ~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v~~~~~~ 1404 (2280)
..+||+||.||-++.|.| .++. ..-.|+.||+||+||+||.+..|+.+||||+|++|..|..++++
T Consensus 156 ~a~VGkn~higgGa~I~G-VLep--~~a~Pv~IgdncliGAns~~veGV~vGdg~VV~aGv~I~~~tki 221 (271)
T COG2171 156 CAQVGKNSHIGGGASIGG-VLEP--LQANPVIIGDNCLIGANSEVVEGVIVGDGCVVAAGVFITQDTKI 221 (271)
T ss_pred cEEECCCcccCCcceEeE-EecC--CCCCCeEECCccEeccccceEeeeEeCCCcEEecceEEeCCcce
Confidence 356666666666666665 2222 23369999999999999999999999999999999999777766
No 320
>COG0644 FixC Dehydrogenases (flavoproteins) [Energy production and conversion]
Probab=98.33 E-value=2.7e-06 Score=109.54 Aligned_cols=43 Identities=40% Similarity=0.487 Sum_probs=39.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
+++||+|||||+||++||++|+++|+ +|+|+||.+.+|-+..+
T Consensus 2 ~~~DVvIVGaGPAGs~aA~~la~~G~-~VlvlEk~~~~G~k~~~ 44 (396)
T COG0644 2 MEYDVVIVGAGPAGSSAARRLAKAGL-DVLVLEKGSEPGAKPCC 44 (396)
T ss_pred ceeeEEEECCchHHHHHHHHHHHcCC-eEEEEecCCCCCCCccc
Confidence 46899999999999999999999998 69999999999986555
No 321
>COG2171 DapD Tetrahydrodipicolinate N-succinyltransferase [Amino acid transport and metabolism]
Probab=98.33 E-value=6.9e-07 Score=101.12 Aligned_cols=91 Identities=20% Similarity=0.215 Sum_probs=73.5
Q ss_pred cCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEcc
Q 037878 1572 LGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGA 1651 (2280)
Q Consensus 1572 lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~ 1651 (2280)
+||-++.++.|.+. .....-.+||+||+|+-++.|++-. +.. ...++.|||||+||+||.+..|+.+||||+|++
T Consensus 137 igA~~~~gtMVd~~--as~G~~a~VGkn~higgGa~I~GVL-ep~--~a~Pv~IgdncliGAns~~veGV~vGdg~VV~a 211 (271)
T COG2171 137 IGAGTGEGTMVDGR--ASVGSCAQVGKNSHIGGGASIGGVL-EPL--QANPVIIGDNCLIGANSEVVEGVIVGDGCVVAA 211 (271)
T ss_pred ECcccCcceEEeee--eeeeccEEECCCcccCCcceEeEEe-cCC--CCCCeEECCccEeccccceEeeeEeCCCcEEec
Confidence 47888888888765 3334458999999999999986422 222 347899999999999999999999999999999
Q ss_pred CccccCCCccCCCcEEec
Q 037878 1652 LSVAPMHSVLQRGGIYIG 1669 (2280)
Q Consensus 1652 ~s~v~~~~~v~~~~~~~G 1669 (2280)
|..|+.+ .|......|
T Consensus 212 Gv~I~~~--tki~~~~~g 227 (271)
T COG2171 212 GVFITQD--TKIYDRVAG 227 (271)
T ss_pred ceEEeCC--cceEEeecc
Confidence 9999999 666666555
No 322
>TIGR03308 phn_thr-fam phosphonate metabolim protein, transferase hexapeptide repeat family. This family of proteins contains copies of the Bacterial transferase hexapeptide repeat family (pfam00132) and is only found in operons encoding the phosphonate C-P lyase system (GenProp0232). Many C-P lyase operons, however, lack a homolog of this protein.
Probab=98.29 E-value=1.9e-06 Score=98.82 Aligned_cols=77 Identities=21% Similarity=0.154 Sum_probs=61.4
Q ss_pred ceEECCCCEeCCCCEEeeccccCCc--------------------------eeecCEEECCCcEECCCCEECCCCEECCC
Q 037878 1336 LVLIGDGAVISEGALIQSHEVKNGV--------------------------LSFQPIKIARKVSVGPYAVIQKGSVIGEE 1389 (2280)
Q Consensus 1336 ~~~IG~~~~I~~~~~l~~~~~~~~~--------------------------~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~ 1389 (2280)
...||++|.|++++.|.+....-.. ...+++.||++|+||.+++|.+|++||++
T Consensus 53 ~~~IG~~~~I~~~v~I~~~~h~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~~~Ig~~~~I~~gv~Ig~~ 132 (204)
T TIGR03308 53 YTTIGKFCSIAAMVRINATNHPMERPTLHHFTYRAAMYFDDASDDADFFAWRRAKRVTIGHDVWIGHGAVILPGVTIGNG 132 (204)
T ss_pred eeEECCCCEECCCCEECCCCCCCCcccccccccccccccccccccccccccccCCCeEECCCCEECCCCEECCCCEECCC
Confidence 3678999999999988643211000 12368999999999999999999999999
Q ss_pred CEECcCCcc----CCCCccccCCCceee
Q 037878 1390 AEVAPLQKS----EGGKPILKSTNANYV 1413 (2280)
Q Consensus 1390 a~ig~~s~v----~~~~~~~~g~p~~~~ 1413 (2280)
++||++++| ++++.+ .|+|++..
T Consensus 133 ~~I~~gs~v~~~i~~~~~~-~G~Pa~~~ 159 (204)
T TIGR03308 133 AVIAAGAVVTKDVAPYTIV-AGVPAKLI 159 (204)
T ss_pred CEECCCCEECCCCCCCcEE-EecCchHh
Confidence 999999997 777777 88998864
No 323
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=98.28 E-value=2.7e-06 Score=110.64 Aligned_cols=37 Identities=38% Similarity=0.720 Sum_probs=34.0
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+||+|||||++|+++|++|+++|. +|+|+||++.+|+
T Consensus 2 ~~vvIIGaG~~G~~~A~~La~~g~-~V~vle~~~~~~~ 38 (410)
T PRK12409 2 SHIAVIGAGITGVTTAYALAQRGY-QVTVFDRHRYAAM 38 (410)
T ss_pred CEEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCCCc
Confidence 599999999999999999999998 6999999987654
No 324
>PRK07364 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=98.28 E-value=3.8e-06 Score=109.64 Aligned_cols=43 Identities=33% Similarity=0.468 Sum_probs=37.8
Q ss_pred cCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 14 LHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 14 ~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
++.+++.++||+|||||++||++|..|+++|+ +|+|+||++..
T Consensus 11 ~~~~~~~~~dV~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 53 (415)
T PRK07364 11 LPSTRSLTYDVAIVGGGIVGLTLAAALKDSGL-RIALIEAQPAE 53 (415)
T ss_pred CCCCCccccCEEEECcCHHHHHHHHHHhcCCC-EEEEEecCCcc
Confidence 44556667899999999999999999999999 69999998764
No 325
>TIGR03536 DapD_gpp 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase. 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase (DapD) is involved in the succinylated branch of the "lysine biosynthesis via diaminopimelate (DAP)" pathway (GenProp0125). This model represents a clade of DapD sequences most closely related to the actinobacterial DapD family represented by the TIGR03535 model. All of the genes evaluated for the seed of this model are found in genomes where the downstream desuccinylase is present, but known DapD genes are absent. Additionally, many of the genes identified by this model are found proximal to genes involved in this lysine biosynthesis pathway.
Probab=98.27 E-value=1.8e-06 Score=100.17 Aligned_cols=87 Identities=20% Similarity=0.258 Sum_probs=61.2
Q ss_pred HcCCEECCCcEECccccCCC---------------CceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCE
Q 037878 1315 MLGAKLGSSVLLDTVDITDP---------------SLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAV 1379 (2280)
Q Consensus 1315 ~lGa~Ig~~v~i~~~~~~~~---------------~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~ 1379 (2280)
.+||.||+|+.|....+..+ ..++||++|.||.+|.|.+. ..++.-. +|+||++|+||++|+
T Consensus 188 r~gA~LGeGT~IM~~a~Vn~nAgtiG~~~IEgrInsGavIGhds~IG~gasIg~t-LsGg~~~--~V~IGe~~lIGagA~ 264 (341)
T TIGR03536 188 RLGAYVGEGTTVMHEGFINFNAGTEGPSMVEGRISAGVMVGKGSDLGGGCSTMGT-LSGGGNI--VISVGEGCLLGANAG 264 (341)
T ss_pred cCCcEECCCCEEecCCEECcCcEecCCceEecccccCCEECCCCEECCCCEEeEE-EeCCCce--eEEECCCcEECCCCE
Confidence 47888888888843221112 12456666666666666332 2222111 299999999999999
Q ss_pred ECCCCEECCCCEECcCCccCCCCcccc
Q 037878 1380 IQKGSVIGEEAEVAPLQKSEGGKPILK 1406 (2280)
Q Consensus 1380 i~pg~~ig~~a~ig~~s~v~~~~~~~~ 1406 (2280)
| |+.||++|+||+|+.|.+++++.-
T Consensus 265 I--GI~IGd~~iIGAGavVtagTkI~~ 289 (341)
T TIGR03536 265 I--GIPLGDRCTVEAGLYITAGTKVAV 289 (341)
T ss_pred E--eeEECCCCEECCCCEEeCCcEEEE
Confidence 9 999999999999999999988843
No 326
>PRK10157 putative oxidoreductase FixC; Provisional
Probab=98.26 E-value=3.1e-06 Score=109.88 Aligned_cols=39 Identities=31% Similarity=0.384 Sum_probs=36.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
++||+|||||++|++||+.|+++|+ +|+|+||.+.+|.+
T Consensus 5 ~~DViIVGaGpAG~~aA~~La~~G~-~V~llEr~~~~g~k 43 (428)
T PRK10157 5 IFDAIIVGAGLAGSVAALVLAREGA-QVLVIERGNSAGAK 43 (428)
T ss_pred cCcEEEECcCHHHHHHHHHHHhCCC-eEEEEEcCCCCCCc
Confidence 5899999999999999999999999 69999999888764
No 327
>cd03360 LbH_AT_putative Putative Acyltransferase (AT), Left-handed parallel beta-Helix (LbH) domain; This group is composed of mostly uncharacterized proteins containing an N-terminal helical subdomain followed by a LbH domain. The alignment contains 6 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity. A few members are identified as NeuD, a sialic acid (Sia) O-acetyltransferase that is required for Sia synthesis and surface polysaccharide sialylation.
Probab=98.25 E-value=2.9e-06 Score=98.25 Aligned_cols=91 Identities=21% Similarity=0.280 Sum_probs=63.8
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceee-------cCEEECCCcEECCCCEECCCCEECCC
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSF-------QPIKIARKVSVGPYAVIQKGSVIGEE 1389 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~-------~~i~Ig~~~~iG~~~~i~pg~~ig~~ 1389 (2280)
+++||+++.|...... ...++||++|.|++++.|..+...++..++ +.++||++|+||.+++|.++++||++
T Consensus 96 ~~~ig~~~~i~~~~~i-~~~~~ig~~~~i~~~~~i~~~~~ig~~~~i~~~~~i~~~~~ig~~~~ig~~~~v~~~~~ig~~ 174 (197)
T cd03360 96 SAVIGEGCVIMAGAVI-NPDARIGDNVIINTGAVIGHDCVIGDFVHIAPGVVLSGGVTIGEGAFIGAGATIIQGVTIGAG 174 (197)
T ss_pred CCEECCCCEEcCCCEE-CCCCEECCCeEECCCCEECCCCEECCCCEECCCCEEcCCcEECCCCEECCCCEEcCCCEECCC
Confidence 4567777777543321 235678888888777777655544433333 46889999999999999999999999
Q ss_pred CEECcCCcc----CCCCccccCCC
Q 037878 1390 AEVAPLQKS----EGGKPILKSTN 1409 (2280)
Q Consensus 1390 a~ig~~s~v----~~~~~~~~g~p 1409 (2280)
+.||++|+| ++++.+ .|+|
T Consensus 175 ~~v~~~~~v~~~~~~~~~~-~g~p 197 (197)
T cd03360 175 AIIGAGAVVTKDVPDGSVV-VGNP 197 (197)
T ss_pred CEECCCCEEcCCCCCCCEE-EecC
Confidence 999999988 445555 4443
No 328
>COG1635 THI4 Ribulose 1,5-bisphosphate synthetase, converts PRPP to RuBP, flavoprotein [Carbohydrate transport and metabolism]
Probab=98.24 E-value=7.3e-07 Score=97.37 Aligned_cols=50 Identities=42% Similarity=0.646 Sum_probs=41.0
Q ss_pred ccccccCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 9 DQFCKLHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 9 ~~~~~~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.-|+.+.... ..||+|||||+|||+|||+|+++|. +|+|+|++..+||-+
T Consensus 20 ~~~~~l~~~~--esDViIVGaGPsGLtAAyyLAk~g~-kV~i~E~~ls~GGG~ 69 (262)
T COG1635 20 RYFEDLLDYL--ESDVIIVGAGPSGLTAAYYLAKAGL-KVAIFERKLSFGGGI 69 (262)
T ss_pred HHHHHHHhhh--hccEEEECcCcchHHHHHHHHhCCc-eEEEEEeecccCCcc
Confidence 3444444332 4699999999999999999999999 599999999999933
No 329
>PRK06481 fumarate reductase flavoprotein subunit; Validated
Probab=98.24 E-value=4.9e-06 Score=110.29 Aligned_cols=41 Identities=37% Similarity=0.488 Sum_probs=37.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||++||+||+.++++|. +|+|+||...+||..
T Consensus 60 ~~~DVvVVG~G~AGl~AAi~Aa~~Ga-~VivlEK~~~~GG~s 100 (506)
T PRK06481 60 DKYDIVIVGAGGAGMSAAIEAKDAGM-NPVILEKMPVAGGNT 100 (506)
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCCCCCCcc
Confidence 46799999999999999999999998 699999999999954
No 330
>PRK11728 hydroxyglutarate oxidase; Provisional
Probab=98.23 E-value=6e-06 Score=106.65 Aligned_cols=41 Identities=34% Similarity=0.388 Sum_probs=36.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCceEE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG~~~ 62 (2280)
+.||+|||||++|+++|++|+++ |. +|+|+||++.+|+.+.
T Consensus 2 ~~dVvIIGgGi~G~s~A~~La~~~~g~-~V~llE~~~~~~~~aS 44 (393)
T PRK11728 2 MYDFVIIGGGIVGLSTAMQLQERYPGA-RIAVLEKESGPARHQT 44 (393)
T ss_pred CccEEEECCcHHHHHHHHHHHHhCCCC-eEEEEeCCCccccccc
Confidence 37999999999999999999999 98 6999999987776543
No 331
>PRK08274 tricarballylate dehydrogenase; Validated
Probab=98.22 E-value=8e-06 Score=107.98 Aligned_cols=43 Identities=30% Similarity=0.442 Sum_probs=38.0
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC--CCceE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT--VGGMC 61 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r--iGG~~ 61 (2280)
|+.+.||+|||||++||+||+.|+++|. +|+|+||.+. .||..
T Consensus 1 ~~~~~DVvVVG~G~aGl~AA~~aa~~G~-~V~vlEk~~~~~~GG~s 45 (466)
T PRK08274 1 MASMVDVLVIGGGNAALCAALAAREAGA-SVLLLEAAPREWRGGNS 45 (466)
T ss_pred CCccCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCcCCCccc
Confidence 4567899999999999999999999998 6999999974 67743
No 332
>PRK13339 malate:quinone oxidoreductase; Reviewed
Probab=98.21 E-value=8e-06 Score=105.83 Aligned_cols=41 Identities=17% Similarity=0.297 Sum_probs=35.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCceEE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG~~~ 62 (2280)
..||+|||||++|+++|+.|++. |. +|+|+||.+.+|-+.+
T Consensus 6 ~~DvvIIGgGI~G~sla~~L~~~~~~~-~V~vlEr~~~~a~~sS 48 (497)
T PRK13339 6 SKDVVLVGAGILSTTFGVLLKELDPDW-NIEVVERLDSPAIESS 48 (497)
T ss_pred cCCEEEECchHHHHHHHHHHHhCCCCC-eEEEEEcCCCcchhcC
Confidence 46999999999999999999998 76 7999999778876444
No 333
>TIGR01377 soxA_mon sarcosine oxidase, monomeric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms
Probab=98.21 E-value=5.5e-06 Score=106.86 Aligned_cols=36 Identities=36% Similarity=0.468 Sum_probs=32.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.||+|||||++|+++|++|+++|. +|+|+|+.+..+
T Consensus 1 ~dvvIIGaGi~G~s~A~~La~~g~-~V~l~e~~~~~~ 36 (380)
T TIGR01377 1 FDVIVVGAGIMGCFAAYHLAKHGK-KTLLLEQFDLPH 36 (380)
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCCCC
Confidence 489999999999999999999998 699999987654
No 334
>KOG2820 consensus FAD-dependent oxidoreductase [General function prediction only]
Probab=98.21 E-value=2.9e-05 Score=90.39 Aligned_cols=40 Identities=43% Similarity=0.543 Sum_probs=35.1
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+|.+..||+|||||+-|++|||.|+|.|. ++++||+.+-.
T Consensus 3 ~~~~~~~viiVGAGVfG~stAyeLaK~g~-killLeqf~~p 42 (399)
T KOG2820|consen 3 EMVKSRDVIIVGAGVFGLSTAYELAKRGD-KILLLEQFPLP 42 (399)
T ss_pred ccccceeEEEEcccccchHHHHHHHhcCC-eEEEEeccCCC
Confidence 45567899999999999999999999997 69999997654
No 335
>PRK11259 solA N-methyltryptophan oxidase; Provisional
Probab=98.20 E-value=6.8e-06 Score=105.79 Aligned_cols=39 Identities=23% Similarity=0.387 Sum_probs=34.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
++.||+|||||++|+++|++|+++|. +|+|+||+...++
T Consensus 2 ~~~dv~IIGgGi~G~s~A~~L~~~g~-~V~lie~~~~~~~ 40 (376)
T PRK11259 2 MRYDVIVIGLGSMGSAAGYYLARRGL-RVLGLDRFMPPHQ 40 (376)
T ss_pred CcccEEEECCCHHHHHHHHHHHHCCC-eEEEEecccCCCC
Confidence 35799999999999999999999998 6999999876543
No 336
>PRK06183 mhpA 3-(3-hydroxyphenyl)propionate hydroxylase; Validated
Probab=98.19 E-value=3.5e-06 Score=113.09 Aligned_cols=39 Identities=38% Similarity=0.600 Sum_probs=35.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
+.++||+|||||++||++|..|++.|+ +|+|+||+...+
T Consensus 8 ~~~~dV~IVGaGp~Gl~lA~~L~~~G~-~v~v~Er~~~~~ 46 (538)
T PRK06183 8 AHDTDVVIVGAGPVGLTLANLLGQYGV-RVLVLERWPTLY 46 (538)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCC
Confidence 456899999999999999999999999 699999997654
No 337
>PRK06847 hypothetical protein; Provisional
Probab=98.19 E-value=9.1e-06 Score=104.59 Aligned_cols=39 Identities=38% Similarity=0.510 Sum_probs=34.6
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
|.+.+||+|||||++||++|+.|++.|+ +|+|+|+++..
T Consensus 1 m~~~~~V~IVGaG~aGl~~A~~L~~~g~-~v~v~E~~~~~ 39 (375)
T PRK06847 1 MAAVKKVLIVGGGIGGLSAAIALRRAGI-AVDLVEIDPEW 39 (375)
T ss_pred CCCcceEEEECCCHHHHHHHHHHHhCCC-CEEEEecCCCC
Confidence 3456799999999999999999999999 69999998753
No 338
>TIGR00292 thiazole biosynthesis enzyme. This enzyme is involved in the biosynthesis of the thiamine precursor thiazole, and is repressed by thiamine.This family includes c-thi1, a Citrus gene induced during natural and ethylene induced fruit maturation and is highly homologous to plant and yeast thi genes involved in thiamine biosynthesis.
Probab=98.18 E-value=1.5e-05 Score=95.07 Aligned_cols=50 Identities=42% Similarity=0.610 Sum_probs=41.6
Q ss_pred ccccccCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 9 DQFCKLHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 9 ~~~~~~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+-|.++... .+.||+|||||++||+||++|+++|. +|+|+||++.+||.+
T Consensus 11 ~~~~~~~~~--~~~DVvIVGgGpAGL~aA~~la~~G~-~V~vlEk~~~~Ggg~ 60 (254)
T TIGR00292 11 RYFEDLLDY--AESDVIIVGAGPSGLTAAYYLAKNGL-KVCVLERSLAFGGGS 60 (254)
T ss_pred HHHHHHHHh--cCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCccc
Confidence 344544443 35799999999999999999999998 699999999999854
No 339
>PRK10015 oxidoreductase; Provisional
Probab=98.18 E-value=1.4e-05 Score=103.76 Aligned_cols=39 Identities=26% Similarity=0.405 Sum_probs=35.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
.++||+|||||++|++||+.|+++|+ +|+|+||.+.+|-
T Consensus 4 ~~~DViIVGgGpAG~~aA~~LA~~G~-~VlliEr~~~~g~ 42 (429)
T PRK10015 4 DKFDAIVVGAGVAGSVAALVMARAGL-DVLVIERGDSAGC 42 (429)
T ss_pred cccCEEEECcCHHHHHHHHHHHhCCC-eEEEEecCCCCCc
Confidence 35899999999999999999999999 6999999887654
No 340
>PRK08244 hypothetical protein; Provisional
Probab=98.17 E-value=4.9e-06 Score=110.74 Aligned_cols=54 Identities=22% Similarity=0.322 Sum_probs=42.3
Q ss_pred CHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 187 GYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 187 G~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
-+.++..+.+++.|.+|+++++|++++.+++++.+.+++.+|+ +++++|.||.|
T Consensus 101 ~le~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g~-~~i~a~~vVgA 154 (493)
T PRK08244 101 ETEKVLEEHARSLGVEIFRGAEVLAVRQDGDGVEVVVRGPDGL-RTLTSSYVVGA 154 (493)
T ss_pred HHHHHHHHHHHHcCCeEEeCCEEEEEEEcCCeEEEEEEeCCcc-EEEEeCEEEEC
Confidence 3455666666667899999999999998888776666655562 57999999998
No 341
>TIGR00275 flavoprotein, HI0933 family. The model when searched with a partial length search brings in proteins with a dinucleotide-binding motif (Rossman fold) over the initial 40 residues of the model, including oxidoreductases and dehydrogenases. Partially characterized members include an FAD-binding protein from Bacillus cereus and flavoprotein HI0933 from Haemophilus influenzae.
Probab=98.17 E-value=7.8e-06 Score=105.13 Aligned_cols=37 Identities=41% Similarity=0.574 Sum_probs=34.1
Q ss_pred EEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 25 GIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 25 ~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
+|||||+|||+||+.|+++|. +|+|+||++.+|+++.
T Consensus 1 vIIGgG~aGl~aAi~aa~~G~-~V~llEk~~~~G~k~~ 37 (400)
T TIGR00275 1 IIIGGGAAGLMAAITAAREGL-SVLLLEKNKKIGKKLL 37 (400)
T ss_pred CEEEEeHHHHHHHHHHHhcCC-cEEEEecCcccccccc
Confidence 699999999999999999998 6999999999998653
No 342
>PRK06184 hypothetical protein; Provisional
Probab=98.17 E-value=1.1e-05 Score=107.61 Aligned_cols=37 Identities=41% Similarity=0.592 Sum_probs=34.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
++.||+|||||++||++|..|+++|+ +|+|+||++..
T Consensus 2 ~~~dVlIVGaGpaGl~~A~~La~~Gi-~v~viE~~~~~ 38 (502)
T PRK06184 2 TTTDVLIVGAGPTGLTLAIELARRGV-SFRLIEKAPEP 38 (502)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCCC
Confidence 46899999999999999999999999 69999998765
No 343
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=98.16 E-value=1.1e-05 Score=104.24 Aligned_cols=39 Identities=36% Similarity=0.422 Sum_probs=34.8
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+..+.||+|||||++|+++|+.|+++|+ +|+|+||++..
T Consensus 3 ~~~~~dV~IvGaG~aGl~~A~~La~~G~-~v~liE~~~~~ 41 (392)
T PRK08773 3 RRSRRDAVIVGGGVVGAACALALADAGL-SVALVEGREPP 41 (392)
T ss_pred CCCCCCEEEECcCHHHHHHHHHHhcCCC-EEEEEeCCCCc
Confidence 3556899999999999999999999999 69999998653
No 344
>PRK00711 D-amino acid dehydrogenase small subunit; Validated
Probab=98.16 E-value=1.3e-05 Score=104.83 Aligned_cols=41 Identities=24% Similarity=0.389 Sum_probs=35.2
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
+||+|||||++||++|++|+++|+ +|+|+|+...+|..++.
T Consensus 1 ~~v~IVG~Gi~Gls~A~~l~~~g~-~V~vle~~~~~~~~aS~ 41 (416)
T PRK00711 1 MRVVVLGSGVIGVTSAWYLAQAGH-EVTVIDRQPGPALETSF 41 (416)
T ss_pred CEEEEECCcHHHHHHHHHHHHCCC-EEEEEeCCCchhhhhee
Confidence 489999999999999999999998 69999998666554443
No 345
>PTZ00383 malate:quinone oxidoreductase; Provisional
Probab=98.15 E-value=1.8e-05 Score=103.09 Aligned_cols=40 Identities=28% Similarity=0.466 Sum_probs=34.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~riGG 59 (2280)
.+.||+|||||+.|+++|++|++. +..+|+|+||.+.+|.
T Consensus 44 ~~~DVvIIGGGI~G~a~A~~La~~~~~~~V~VlEk~~~~a~ 84 (497)
T PTZ00383 44 DVYDVVIVGGGVTGTALFYTLSKFTNLKKIALIERRSDFAL 84 (497)
T ss_pred CcccEEEECccHHHHHHHHHHHhhCCCCEEEEEecCcchhh
Confidence 357999999999999999999996 4336999999986653
No 346
>COG0562 Glf UDP-galactopyranose mutase [Cell envelope biogenesis, outer membrane]
Probab=98.14 E-value=6.6e-06 Score=95.04 Aligned_cols=57 Identities=30% Similarity=0.384 Sum_probs=48.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeeccc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSH 79 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~ 79 (2280)
.|++|||||++|+..|..|++.|+ +|+|+||++++||.|.+...++.|+.......+
T Consensus 2 fd~lIVGaGlsG~V~A~~a~~~gk-~VLIvekR~HIGGNaYde~d~~tGIlvHkYGpH 58 (374)
T COG0562 2 FDYLIVGAGLSGAVIAEVAAQLGK-RVLIVEKRNHIGGNAYDEADDQTGILVHKYGPH 58 (374)
T ss_pred CcEEEECCchhHHHHHHHHHHcCC-EEEEEeccccCCCccccccCCCCCeEEeeccCc
Confidence 689999999999999999999998 699999999999999998877666655444333
No 347
>COG2072 TrkA Predicted flavoprotein involved in K+ transport [Inorganic ion transport and metabolism]
Probab=98.13 E-value=9.7e-06 Score=104.88 Aligned_cols=46 Identities=37% Similarity=0.662 Sum_probs=40.4
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
++++.||+|||||+|||++|++|+++|..+++||||++++||--+.
T Consensus 5 ~~~~~~v~IIGaG~sGlaaa~~L~~~g~~~~~i~Ek~~~~Gg~W~~ 50 (443)
T COG2072 5 VATHTDVAIIGAGQSGLAAAYALKQAGVPDFVIFEKRDDVGGTWRY 50 (443)
T ss_pred cCCcccEEEECCCHHHHHHHHHHHHcCCCcEEEEEccCCcCCcchh
Confidence 4567899999999999999999999998449999999999995443
No 348
>PRK04176 ribulose-1,5-biphosphate synthetase; Provisional
Probab=98.13 E-value=1.8e-05 Score=94.73 Aligned_cols=51 Identities=43% Similarity=0.705 Sum_probs=42.4
Q ss_pred cccccccCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 8 DDQFCKLHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 8 ~~~~~~~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++.|.++...+ +.||+|||||+|||+||++|+++|+ +|+|+||+..+||.+
T Consensus 14 ~~~~~~~~~~~--~~DVvIVGgGpAGl~AA~~la~~G~-~V~liEk~~~~Ggg~ 64 (257)
T PRK04176 14 EEYFEKLLDYL--EVDVAIVGAGPSGLTAAYYLAKAGL-KVAVFERKLSFGGGM 64 (257)
T ss_pred HHHHHHHHHhc--cCCEEEECccHHHHHHHHHHHhCCC-eEEEEecCCCCCCcc
Confidence 34455555433 4799999999999999999999999 699999999998854
No 349
>PRK08163 salicylate hydroxylase; Provisional
Probab=98.12 E-value=1.8e-05 Score=102.61 Aligned_cols=40 Identities=45% Similarity=0.657 Sum_probs=35.5
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
|+++.||+|||||++||++|..|+++|+ +|+|+||++.++
T Consensus 1 ~~~~~~V~IvGaGiaGl~~A~~L~~~g~-~v~v~Er~~~~~ 40 (396)
T PRK08163 1 MTKVTPVLIVGGGIGGLAAALALARQGI-KVKLLEQAAEIG 40 (396)
T ss_pred CCCCCeEEEECCcHHHHHHHHHHHhCCC-cEEEEeeCcccc
Confidence 4456899999999999999999999999 699999987653
No 350
>PRK05257 malate:quinone oxidoreductase; Validated
Probab=98.10 E-value=2.6e-05 Score=102.21 Aligned_cols=43 Identities=21% Similarity=0.363 Sum_probs=36.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCceEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG~~~ 62 (2280)
+.+.||+|||||+.|+++||+|++. |. +|+|+||++.+|+...
T Consensus 3 ~~~~DVvIIGgGIiG~slA~~L~~~~~g~-~V~VlEk~~~~a~~sS 47 (494)
T PRK05257 3 ESKTDVVLIGGGIMSATLGTLLKELEPEW-SITMFERLDGVALESS 47 (494)
T ss_pred CccceEEEECcHHHHHHHHHHHHHhCCCC-eEEEEEcCCchhhhcC
Confidence 4567999999999999999999985 66 6999999988776543
No 351
>PRK09126 hypothetical protein; Provisional
Probab=98.09 E-value=1.6e-05 Score=103.03 Aligned_cols=37 Identities=43% Similarity=0.644 Sum_probs=33.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
++.||+|||||++||++|+.|+++|+ +|+|+||....
T Consensus 2 ~~~dviIvGgG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 38 (392)
T PRK09126 2 MHSDIVVVGAGPAGLSFARSLAGSGL-KVTLIERQPLA 38 (392)
T ss_pred CcccEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCcc
Confidence 36899999999999999999999999 69999998764
No 352
>PRK07045 putative monooxygenase; Reviewed
Probab=98.08 E-value=9.1e-06 Score=104.96 Aligned_cols=37 Identities=27% Similarity=0.308 Sum_probs=33.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+++||+|||||++||++|+.|+++|+ +|+|+||.+..
T Consensus 4 ~~~~V~IiGgGpaGl~~A~~L~~~G~-~v~v~E~~~~~ 40 (388)
T PRK07045 4 NPVDVLINGSGIAGVALAHLLGARGH-SVTVVERAARN 40 (388)
T ss_pred ceeEEEEECCcHHHHHHHHHHHhcCC-cEEEEeCCCcc
Confidence 45799999999999999999999999 69999998754
No 353
>PRK06834 hypothetical protein; Provisional
Probab=98.07 E-value=2.5e-05 Score=102.85 Aligned_cols=36 Identities=36% Similarity=0.578 Sum_probs=33.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.+.||+|||||++||++|+.|+++|+ +|+|+||++.
T Consensus 2 ~~~dVlIVGaGp~Gl~lA~~La~~G~-~v~vlEr~~~ 37 (488)
T PRK06834 2 TEHAVVIAGGGPTGLMLAGELALAGV-DVAIVERRPN 37 (488)
T ss_pred CcceEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCC
Confidence 45899999999999999999999999 6999999864
No 354
>COG0654 UbiH 2-polyprenyl-6-methoxyphenol hydroxylase and related FAD-dependent oxidoreductases [Coenzyme metabolism / Energy production and conversion]
Probab=98.07 E-value=1.4e-05 Score=102.83 Aligned_cols=33 Identities=52% Similarity=0.803 Sum_probs=31.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
.+||+|||||++||++|..|+++|+ +|+|+|+.
T Consensus 2 ~~dV~IvGaG~aGl~lA~~L~~~G~-~V~l~E~~ 34 (387)
T COG0654 2 MLDVAIVGAGPAGLALALALARAGL-DVTLLERA 34 (387)
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-cEEEEccC
Confidence 5799999999999999999999999 69999997
No 355
>TIGR03329 Phn_aa_oxid putative aminophosphonate oxidoreductase. This clade of sequences are members of the pfam01266 family of FAD-dependent oxidoreductases. Characterized proteins within this family include glycerol-3-phosphate dehydrogenase (1.1.99.5), sarcosine oxidase beta subunit (1.5.3.1) and a number of deaminating amino acid oxidases (1.4.-.-). These genes have been consistently observed in a genomic context including genes for the import and catabolism of 2-aminoethylphosphonate (AEP). If the substrate of this oxidoreductase is AEP itself, then it is probably acting in the manner of a deaminating oxidase, resulting in the same product (phosphonoacetaldehyde) as the transaminase PhnW (TIGR02326), but releasing ammonia instead of coupling to pyruvate:alanine. Alternatively, it is reasonable to suppose that the various ABC cassette transporters which are also associated with these loci allow the import of phosphonates closely related to AEP which may not be substrates for PhnW.
Probab=98.07 E-value=2.9e-05 Score=102.18 Aligned_cols=36 Identities=33% Similarity=0.452 Sum_probs=32.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~r 56 (2280)
.+.||+|||||++||++||+|+++ |. +|+|+|++..
T Consensus 23 ~~~DVvIIGgGi~Gls~A~~La~~~~G~-~V~vlE~~~~ 60 (460)
T TIGR03329 23 TQADVCIVGGGFTGLWTAIMIKQQRPAL-DVLVLEADLC 60 (460)
T ss_pred ceeCEEEECCCHHHHHHHHHHHHhCCCC-eEEEEeCCcc
Confidence 457999999999999999999998 87 6999999643
No 356
>TIGR01320 mal_quin_oxido malate:quinone-oxidoreductase. This membrane-associated enzyme is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in E. coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase.
Probab=98.07 E-value=2e-05 Score=103.24 Aligned_cols=39 Identities=23% Similarity=0.440 Sum_probs=34.4
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCceE
Q 037878 22 TRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG~~ 61 (2280)
.||+|||||++|+++|+.|++. |. +|+|+||.+.+|.+.
T Consensus 1 ~DVvIIGgGI~G~a~A~~L~~~~~g~-~V~VlEk~~~~a~~~ 41 (483)
T TIGR01320 1 TDVVLIGAGIMSATLGVLLRELEPNW-SITLIERLDAVAAES 41 (483)
T ss_pred CcEEEECchHHHHHHHHHHHHhCCCC-eEEEEEcCCcchhhh
Confidence 4899999999999999999997 87 699999988776533
No 357
>TIGR03364 HpnW_proposed FAD dependent oxidoreductase TIGR03364. This clade of FAD dependent oxidoreductases (members of the pfam01266 family) is syntenically associated with a family of proposed phosphonatase-like enzymes (TIGR03351) and is also found (less frequently) in association with phosphonate transporter components. A likely role for this enzyme involves the oxidative deamination of an aminophosphonate differring slightly from 2-aminoethylphosphonate, possibly 1-hydroxy-2-aminoethylphosphonate (see the comments for TIGR03351). Many members of the larger FAD dependent oxidoreductase family act as amino acid oxidative deaminases.
Probab=98.06 E-value=2.2e-05 Score=100.59 Aligned_cols=34 Identities=41% Similarity=0.591 Sum_probs=31.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.||+|||||++|+++|++|+++|. +|+|+|++..
T Consensus 1 ~dv~IIG~Gi~G~s~A~~L~~~G~-~V~vle~~~~ 34 (365)
T TIGR03364 1 YDLIIVGAGILGLAHAYAAARRGL-SVTVIERSSR 34 (365)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCC
Confidence 489999999999999999999998 6999999764
No 358
>TIGR02032 GG-red-SF geranylgeranyl reductase family. This model represents a subfamily which includes geranylgeranyl reductases involved in chlorophyll and bacteriochlorophyll biosynthesis as well as other related enzymes which may also act on geranylgeranyl groups or related substrates.
Probab=98.05 E-value=2.1e-05 Score=97.59 Aligned_cols=37 Identities=43% Similarity=0.556 Sum_probs=34.0
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+||+|||||++||++|+.|++.|. +|+|+||++..+.
T Consensus 1 ~dv~IiGaG~aGl~~A~~l~~~g~-~v~vie~~~~~~~ 37 (295)
T TIGR02032 1 YDVVVVGAGPAGASAAYRLADKGL-RVLLLEKKSFPRY 37 (295)
T ss_pred CCEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCCCCc
Confidence 489999999999999999999999 6999999887654
No 359
>PRK07236 hypothetical protein; Provisional
Probab=98.05 E-value=3.6e-05 Score=99.27 Aligned_cols=37 Identities=30% Similarity=0.505 Sum_probs=33.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
|+.+||+|||||++||++|+.|+++|+ +|+|+||++.
T Consensus 4 ~~~~~ViIVGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 40 (386)
T PRK07236 4 MSGPRAVVIGGSLGGLFAALLLRRAGW-DVDVFERSPT 40 (386)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHhCCC-CEEEEecCCC
Confidence 345899999999999999999999999 6999999864
No 360
>TIGR01988 Ubi-OHases Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family. This model represents a family of FAD-dependent hydroxylases (monooxygenases) which are all believed to act in the aerobic ubiquinone biosynthesis pathway. A separate set of hydroxylases, as yet undiscovered, are believed to be active under anaerobic conditions. In E. coli three enzyme activities have been described, UbiB (which acts first at position 6, see TIGR01982), UbiH (which acts at position 4, ) and UbiF (which acts at position 5). UbiH and UbiF are similar to one another and form the basis of this subfamily. Interestingly, E. coli contains another hydroxylase gene, called visC, that is highly similar to UbiF, adjacent to UbiH and, when mutated, results in a phenotype similar to that of UbiH (which has also been named visB). Several other species appear to have three homologs in this family, although they assort themselves differently on phylogenetic trees (e.g. Xylella and Mesorhizobium) maki
Probab=98.05 E-value=1.9e-05 Score=102.08 Aligned_cols=35 Identities=43% Similarity=0.607 Sum_probs=32.4
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
||+|||||++||++|+.|+++|+ +|+|+||+...+
T Consensus 1 dViIvGaG~aGl~~A~~L~~~G~-~v~v~Er~~~~~ 35 (385)
T TIGR01988 1 DIVIVGGGMVGLALALALARSGL-KIALIEATPAEA 35 (385)
T ss_pred CEEEECCCHHHHHHHHHHhcCCC-EEEEEeCCCccc
Confidence 79999999999999999999999 699999987653
No 361
>PRK08132 FAD-dependent oxidoreductase; Provisional
Probab=98.04 E-value=2.5e-05 Score=105.37 Aligned_cols=39 Identities=38% Similarity=0.587 Sum_probs=35.1
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.+.+.||+|||||++||++|+.|++.|+ +|+|+||++.+
T Consensus 20 ~~~~~dVlIVGaGpaGl~lA~~L~~~G~-~v~viE~~~~~ 58 (547)
T PRK08132 20 DPARHPVVVVGAGPVGLALAIDLAQQGV-PVVLLDDDDTL 58 (547)
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 3456799999999999999999999999 69999999865
No 362
>TIGR01373 soxB sarcosine oxidase, beta subunit family, heterotetrameric form. Sarcosine oxidase catalyzes the oxidative demethylation of sarcosine to glycine. The reaction converts tetrahydrofolate to 5,10-methylene-tetrahydrofolate. The enzyme is known in monomeric and heterotetrameric (alpha,beta,gamma,delta) forms.
Probab=98.04 E-value=3.6e-05 Score=100.13 Aligned_cols=38 Identities=50% Similarity=0.581 Sum_probs=32.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~ri 57 (2280)
.+.||+|||||++|+++||+|+++ |.++|+|+||+.-.
T Consensus 29 ~~~dvvIIGgGi~G~s~A~~L~~~~g~~~V~vle~~~~~ 67 (407)
T TIGR01373 29 PTYDVIIVGGGGHGLATAYYLAKEHGITNVAVLEKGWLG 67 (407)
T ss_pred ccCCEEEECCcHHHHHHHHHHHHhcCCCeEEEEEccccc
Confidence 467999999999999999999995 85369999997533
No 363
>TIGR01813 flavo_cyto_c flavocytochrome c. This model describes a family of redox proteins related to the succinate dehydrogenases and fumarate reductases of E. coli, mitochondria, and other well-characterized systems. A member of this family from Shewanella frigidimarina NCIMB400 is characterized as a water-soluble periplasmic protein with four heme groups, a non-covalently bound FAD, and essentially unidirectional fumarate reductase activity. At least seven distinct members of this family are found in Shewanella oneidensis, a species able to use a wide variety of pathways for respiraton.
Probab=98.03 E-value=3e-05 Score=101.85 Aligned_cols=38 Identities=45% Similarity=0.645 Sum_probs=35.7
Q ss_pred eEEEECccHHHHHHHHHHHhCC-CCceEEEecCCCCCceE
Q 037878 23 RIGIVGGGPSGLSTAYALAKLG-YRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G-~~~VtVlEk~~riGG~~ 61 (2280)
||+|||||++||+||+.++++| . +|+|+||.+..||.+
T Consensus 1 DVvVVG~G~AGl~AA~~aa~~G~~-~V~vlEk~~~~gg~s 39 (439)
T TIGR01813 1 DVVVVGSGFAGLSAALSAKKAGAA-NVVLLEKMPVIGGNS 39 (439)
T ss_pred CEEEECCCHHHHHHHHHHHHcCCc-cEEEEecCCCCCCcc
Confidence 7999999999999999999999 8 699999999999854
No 364
>PRK05883 acyl carrier protein; Validated
Probab=98.03 E-value=1.4e-05 Score=78.51 Aligned_cols=76 Identities=20% Similarity=0.368 Sum_probs=71.4
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
...+++++|.++.++.|+++++.|..+++|+ ++|-|||..+.++..+.++||+.++..++.+.+|+++|+.++.+.
T Consensus 11 ~~~~I~~~l~~iia~~l~v~~~~I~~d~~l~~dlg~DSL~~v~lv~~lE~~fgI~i~~ee~~~~~TV~dl~~~v~~~ 87 (91)
T PRK05883 11 SPSTVSATLLSILRDDLNVDLTRVTPDARLVDDVGLDSVAFAVGMVAIEERLGVALSEEDLLSCDTVGDLEAAIAAK 87 (91)
T ss_pred CHHHHHHHHHHHHHHHhCCChhhCCCCCchhhccCCChHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 3577899999999999999999999999996 899999999999999999999999999999999999999999764
No 365
>PRK12266 glpD glycerol-3-phosphate dehydrogenase; Reviewed
Probab=98.03 E-value=1.8e-05 Score=104.99 Aligned_cols=43 Identities=23% Similarity=0.288 Sum_probs=38.3
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
|++++||+|||||++|+++|+.|+++|. +|+|+||++..+|-.
T Consensus 3 ~~~~~DVvIIGGGi~G~~~A~~la~rGl-~V~LvEk~d~~~GtS 45 (508)
T PRK12266 3 MMETYDLLVIGGGINGAGIARDAAGRGL-SVLLCEQDDLASATS 45 (508)
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCC-eEEEEecCCCCCCcc
Confidence 4567899999999999999999999999 699999998777743
No 366
>PF01946 Thi4: Thi4 family; PDB: 1RP0_A 3FPZ_B 3JSK_K.
Probab=98.02 E-value=3e-06 Score=94.05 Aligned_cols=39 Identities=44% Similarity=0.760 Sum_probs=33.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+.||+|||||+|||+||++|+++|+ +|+|+|++..+||.
T Consensus 17 ~~DV~IVGaGpaGl~aA~~La~~g~-kV~v~E~~~~~GGg 55 (230)
T PF01946_consen 17 EYDVAIVGAGPAGLTAAYYLAKAGL-KVAVIERKLSPGGG 55 (230)
T ss_dssp EESEEEE--SHHHHHHHHHHHHHTS--EEEEESSSS-BTT
T ss_pred cCCEEEECCChhHHHHHHHHHHCCC-eEEEEecCCCCCcc
Confidence 5799999999999999999999999 59999999999983
No 367
>PRK13369 glycerol-3-phosphate dehydrogenase; Provisional
Probab=98.02 E-value=4.9e-05 Score=101.02 Aligned_cols=41 Identities=32% Similarity=0.386 Sum_probs=37.0
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
|+.+.||+|||||++|+++|+.|+++|. +|+|+||++..+|
T Consensus 3 ~~~~~DVvIIGGGi~G~~~A~~la~rG~-~V~LlEk~d~~~G 43 (502)
T PRK13369 3 EPETYDLFVIGGGINGAGIARDAAGRGL-KVLLCEKDDLAQG 43 (502)
T ss_pred CCcccCEEEECCCHHHHHHHHHHHhCCC-cEEEEECCCCCCC
Confidence 5567899999999999999999999999 6999999986655
No 368
>CHL00124 acpP acyl carrier protein; Validated
Probab=98.02 E-value=1.1e-05 Score=78.47 Aligned_cols=76 Identities=21% Similarity=0.362 Sum_probs=70.4
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChhh-cccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLVS-YGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~-lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
..++.+.++++.+++++++++.|..+++|.+ +|.||+..+.++..+.++||+.++..++.+.+|++++++++.+..
T Consensus 3 ~~~i~~~l~~ii~~~~~~~~~~i~~d~~l~~dlg~DSl~~~eli~~le~~f~i~i~~~~~~~~~tv~~l~~~i~~~~ 79 (82)
T CHL00124 3 KNDIFEKVQSIVAEQLGIEKSEVTLDANFTRDLGADSLDVVELVMAIEEKFDIEIPDEDAEKISTLQEAVDFISQKI 79 (82)
T ss_pred HHHHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCccCHHHHHHcCCHHHHHHHHHHHh
Confidence 3567789999999999998889999999997 999999999999999999999999999999999999999997643
No 369
>PRK08849 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=98.01 E-value=6e-06 Score=106.32 Aligned_cols=34 Identities=38% Similarity=0.560 Sum_probs=31.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
..||+|||||++||++|..|+++|+ +|+|+|+..
T Consensus 3 ~~dv~IvGgG~aGl~~A~~L~~~G~-~v~l~E~~~ 36 (384)
T PRK08849 3 KYDIAVVGGGMVGAATALGFAKQGR-SVAVIEGGE 36 (384)
T ss_pred cccEEEECcCHHHHHHHHHHHhCCC-cEEEEcCCC
Confidence 4799999999999999999999999 699999874
No 370
>PRK01747 mnmC bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase; Reviewed
Probab=98.01 E-value=1.6e-05 Score=109.26 Aligned_cols=38 Identities=37% Similarity=0.541 Sum_probs=34.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
.+||+|||||++|+++|++|+++|. +|+|+|++..+|+
T Consensus 260 ~~dVvIIGaGIaG~s~A~~La~~G~-~V~VlE~~~~~~~ 297 (662)
T PRK01747 260 ARDAAIIGGGIAGAALALALARRGW-QVTLYEADEAPAQ 297 (662)
T ss_pred CCCEEEECccHHHHHHHHHHHHCCC-eEEEEecCCCccc
Confidence 3699999999999999999999998 6999999877664
No 371
>PRK00982 acpP acyl carrier protein; Provisional
Probab=98.01 E-value=1.1e-05 Score=77.75 Aligned_cols=72 Identities=24% Similarity=0.370 Sum_probs=67.7
Q ss_pred HHHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1081 DIVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1081 ~~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
++.+.++++.+++++++++.+..+.+| -++|-|||..+.+...+++++|+.++..++.+.+|+++|+.++.+
T Consensus 3 ~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlglDSl~~~~li~~le~~f~i~i~~~~~~~~~ti~~l~~~l~~ 75 (78)
T PRK00982 3 EIFEKVKKIIVEQLGVDEEEVTPEASFVDDLGADSLDTVELVMALEEEFGIEIPDEDAEKIKTVGDAVDYIEK 75 (78)
T ss_pred HHHHHHHHHHHHHHCCCHHHCCCCcchHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCcHHHHHHHHHH
Confidence 467889999999999998899999999 799999999999999999999999999999999999999999875
No 372
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=98.00 E-value=6.9e-06 Score=104.81 Aligned_cols=53 Identities=21% Similarity=0.314 Sum_probs=38.8
Q ss_pred HHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeC-CCceEEEEeCEEEEc
Q 037878 189 TSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHS-NGECEVMEFDKIIIS 241 (2280)
Q Consensus 189 ~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~-~G~~~~i~aD~VI~A 241 (2280)
.++....++..|++|+++++|++++.+++++.+.+... +|+.++++||.||-|
T Consensus 114 ~~~L~~~~~~~gv~i~~~~~v~~~~~d~~~~~~~~~~~~~g~~~~i~adlvVgA 167 (356)
T PF01494_consen 114 DRALREEAEERGVDIRFGTRVVSIEQDDDGVTVVVRDGEDGEEETIEADLVVGA 167 (356)
T ss_dssp HHHHHHHHHHHTEEEEESEEEEEEEEETTEEEEEEEETCTCEEEEEEESEEEE-
T ss_pred HHhhhhhhhhhhhhheeeeecccccccccccccccccccCCceeEEEEeeeecc
Confidence 33333333445789999999999999888876666664 565568999999998
No 373
>PRK07588 hypothetical protein; Provisional
Probab=98.00 E-value=4.5e-05 Score=98.64 Aligned_cols=35 Identities=31% Similarity=0.530 Sum_probs=31.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+||+|||||++||++|+.|+++|+ +|+|+||.+..
T Consensus 1 ~~V~IVGgG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 35 (391)
T PRK07588 1 MKVAISGAGIAGPTLAYWLRRYGH-EPTLIERAPEL 35 (391)
T ss_pred CeEEEECccHHHHHHHHHHHHCCC-ceEEEeCCCCc
Confidence 489999999999999999999999 69999997643
No 374
>PF00890 FAD_binding_2: FAD binding domain of the Pfam family.; InterPro: IPR003953 In bacteria two distinct, membrane-bound, enzyme complexes are responsible for the interconversion of fumarate and succinate (1.3.99.1 from EC): fumarate reductase (Frd) is used in anaerobic growth, and succinate dehydrogenase (Sdh) is used in aerobic growth. Both complexes consist of two main components: a membrane-extrinsic component composed of a FAD-binding flavoprotein and an iron-sulphur protein; and an hydrophobic component composed of a membrane anchor protein and/or a cytochrome B. In eukaryotes mitochondrial succinate dehydrogenase (ubiquinone) (1.3.5.1 from EC) is an enzyme composed of two subunits: a FAD flavoprotein and and iron-sulphur protein. The flavoprotein subunit is a protein of about 60 to 70 Kd to which FAD is covalently bound to a histidine residue which is located in the N-terminal section of the protein []. The sequence around that histidine is well conserved in Frd and Sdh from various bacterial and eukaryotic species []. This family includes members that bind FAD such as the flavoprotein subunits from succinate and fumarate dehydrogenase, aspartate oxidase and the alpha subunit of adenylylsulphate reductase. ; GO: 0009055 electron carrier activity, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2BS4_A 2BS3_A 2BS2_A 1E7P_J 1QLB_A 1KNR_A 1KNP_A 1CHU_A 2E5V_A 3AEF_A ....
Probab=98.00 E-value=3.1e-05 Score=101.07 Aligned_cols=36 Identities=39% Similarity=0.640 Sum_probs=33.2
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
||+|||+|+|||+||+.++++|. +|+|+||.+..||
T Consensus 1 DVvVIG~G~AGl~AA~~Aae~G~-~V~lvek~~~~gg 36 (417)
T PF00890_consen 1 DVVVIGGGLAGLAAAIEAAEAGA-KVLLVEKGPRLGG 36 (417)
T ss_dssp SEEEE-SSHHHHHHHHHHHHTTT--EEEEESSSGGGS
T ss_pred CEEEECCCHHHHHHHHHHhhhcC-eEEEEEeeccccc
Confidence 89999999999999999999998 6999999999998
No 375
>PRK11101 glpA sn-glycerol-3-phosphate dehydrogenase subunit A; Provisional
Probab=98.00 E-value=6.5e-05 Score=100.47 Aligned_cols=38 Identities=32% Similarity=0.475 Sum_probs=34.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
++||+|||||+.|+++|+.|+++|. +|+|+||++..+|
T Consensus 6 ~~DVvIIGGGi~G~~iA~~La~rG~-~V~LlEk~d~~~G 43 (546)
T PRK11101 6 ETDVIIIGGGATGAGIARDCALRGL-RCILVERHDIATG 43 (546)
T ss_pred cccEEEECcCHHHHHHHHHHHHcCC-eEEEEECCCCCCC
Confidence 5899999999999999999999999 6999999775444
No 376
>PRK06126 hypothetical protein; Provisional
Probab=98.00 E-value=2.4e-05 Score=105.57 Aligned_cols=36 Identities=39% Similarity=0.620 Sum_probs=32.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.+.||+|||||++||++|+.|+++|+ +|+|+||++.
T Consensus 6 ~~~~VlIVGaGpaGL~~Al~La~~G~-~v~viEr~~~ 41 (545)
T PRK06126 6 SETPVLIVGGGPVGLALALDLGRRGV-DSILVERKDG 41 (545)
T ss_pred ccCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCC
Confidence 35799999999999999999999999 6999999764
No 377
>PRK12839 hypothetical protein; Provisional
Probab=97.99 E-value=8.2e-05 Score=99.63 Aligned_cols=49 Identities=35% Similarity=0.466 Sum_probs=43.4
Q ss_pred cCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 14 LHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 14 ~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
|.+++..+.||+|||+|.+||+||+.|+++|. +|+|+||.+.+||.+..
T Consensus 1 ~~~~~~~~~dv~ViG~G~aG~~aa~~~~~~g~-~v~~iek~~~~gg~~~~ 49 (572)
T PRK12839 1 MTPSMTHTYDVVVVGSGAGGLSAAVAAAYGGA-KVLVVEKASTCGGATAW 49 (572)
T ss_pred CCCCcCCcCCEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCCCCccccc
Confidence 34566778999999999999999999999998 69999999999997644
No 378
>COG0665 DadA Glycine/D-amino acid oxidases (deaminating) [Amino acid transport and metabolism]
Probab=97.96 E-value=2.9e-05 Score=100.47 Aligned_cols=40 Identities=45% Similarity=0.669 Sum_probs=35.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
++++||+|||||++|+++||+|+++|. +|+|+|++...+|
T Consensus 2 ~~~~~vvVIGgGi~Gls~A~~La~~G~-~V~vie~~~~~~g 41 (387)
T COG0665 2 SMKMDVVIIGGGIVGLSAAYYLAERGA-DVTVLEAGEAGGG 41 (387)
T ss_pred CCcceEEEECCcHHHHHHHHHHHHcCC-EEEEEecCccCCc
Confidence 457899999999999999999999998 7999999776553
No 379
>PRK07190 hypothetical protein; Provisional
Probab=97.96 E-value=1.6e-05 Score=104.52 Aligned_cols=36 Identities=33% Similarity=0.493 Sum_probs=33.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..||+|||||++||++|..|+++|+ +|+|+||.+..
T Consensus 5 ~~dVlIVGAGPaGL~lA~~Lar~Gi-~V~llEr~~~~ 40 (487)
T PRK07190 5 VTDVVIIGAGPVGLMCAYLGQLCGL-NTVIVDKSDGP 40 (487)
T ss_pred cceEEEECCCHHHHHHHHHHHHcCC-CEEEEeCCCcc
Confidence 4799999999999999999999999 69999998764
No 380
>PRK07121 hypothetical protein; Validated
Probab=97.94 E-value=0.00011 Score=97.70 Aligned_cols=41 Identities=29% Similarity=0.394 Sum_probs=37.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||++||+||+.++++|. +|+|+||.+..||..
T Consensus 19 ~~~DVvVVGaG~AGl~AA~~aae~G~-~VillEK~~~~gG~s 59 (492)
T PRK07121 19 DEADVVVVGFGAAGACAAIEAAAAGA-RVLVLERAAGAGGAT 59 (492)
T ss_pred CccCEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCCCCCCcc
Confidence 46799999999999999999999998 699999999999854
No 381
>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis]
Probab=97.94 E-value=1.8e-05 Score=98.78 Aligned_cols=68 Identities=28% Similarity=0.419 Sum_probs=51.8
Q ss_pred eCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccc
Q 037878 1576 IGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVA 1655 (2280)
Q Consensus 1576 IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v 1655 (2280)
||.||.|+.++.+.. ..|++||+||+||.| +++.|++++.|++++.+.||+.+|.++++|.+-++
T Consensus 353 IG~~c~IgsN~~I~~---S~iw~~v~Igdnc~I------------~~aii~d~v~i~~~~~l~~g~vl~~~VVv~~~~~l 417 (673)
T KOG1461|consen 353 IGANCRIGSNVRIKN---SFIWNNVTIGDNCRI------------DHAIICDDVKIGEGAILKPGSVLGFGVVVGRNFVL 417 (673)
T ss_pred ecCCCEecCceEEee---eeeecCcEECCCceE------------eeeEeecCcEeCCCcccCCCcEEeeeeEeCCCccc
Confidence 555555555443333 789999999999999 78889999999888888888877777777777776
Q ss_pred cCC
Q 037878 1656 PMH 1658 (2280)
Q Consensus 1656 ~~~ 1658 (2280)
+++
T Consensus 418 ~~n 420 (673)
T KOG1461|consen 418 PKN 420 (673)
T ss_pred ccc
Confidence 666
No 382
>PRK12834 putative FAD-binding dehydrogenase; Reviewed
Probab=97.93 E-value=7.2e-05 Score=100.48 Aligned_cols=43 Identities=33% Similarity=0.519 Sum_probs=38.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC--CCCceEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH--TVGGMCE 62 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~--riGG~~~ 62 (2280)
..+.||+|||+|.|||+||+.++++|. +|+|+||.+ .+||.+.
T Consensus 2 ~~~~DVvVVG~G~AGl~AAl~Aa~~G~-~VivlEK~~~~~~GG~s~ 46 (549)
T PRK12834 2 AMDADVIVVGAGLAGLVAAAELADAGK-RVLLLDQENEANLGGQAF 46 (549)
T ss_pred CccCCEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCCCCCCCCcee
Confidence 456899999999999999999999998 699999999 8899653
No 383
>TIGR01984 UbiH 2-polyprenyl-6-methoxyphenol 4-hydroxylase. This model represents the FAD-dependent monoxygenase responsible for the second hydroxylation step in the aerobic ubiquinone bioynthetic pathway. The scope of this model is limited to the proteobacteria. This family is closely related to the UbiF hydroxylase which catalyzes the final hydroxylation step. The enzyme has also been named VisB due to a mutant VISible light sensitive phenotype.
Probab=97.93 E-value=4.8e-05 Score=98.21 Aligned_cols=34 Identities=44% Similarity=0.669 Sum_probs=31.5
Q ss_pred eEEEECccHHHHHHHHHHHhCC-CCceEEEecCCCC
Q 037878 23 RIGIVGGGPSGLSTAYALAKLG-YRNVTLLEKYHTV 57 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G-~~~VtVlEk~~ri 57 (2280)
||+|||||++||++|+.|+++| + +|+|+||....
T Consensus 1 dv~IvGaG~aGl~~A~~L~~~G~~-~v~v~E~~~~~ 35 (382)
T TIGR01984 1 DVIIVGGGLVGLSLALALSRLGKI-KIALIEANSPS 35 (382)
T ss_pred CEEEECccHHHHHHHHHHhcCCCc-eEEEEeCCCcc
Confidence 7999999999999999999999 9 69999998653
No 384
>KOG3121 consensus Dynactin, subunit p25 [Cytoskeleton]
Probab=97.92 E-value=2e-05 Score=78.96 Aligned_cols=88 Identities=15% Similarity=0.267 Sum_probs=68.3
Q ss_pred CCeeCCCceeccCCccc----------CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcE
Q 037878 1573 GAKIGRYCSIRAINPVS----------CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSV 1642 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~----------~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ 1642 (2280)
.+|||+.|.+.....+- ..-.+.|||++||+++|.+ .-..||..+.||.+++|+-+..
T Consensus 54 nVr~GryCV~ksrsvIRPp~K~FSKg~affp~hiGdhVFieE~cVV------------nAAqIgsyVh~GknaviGrrCV 121 (184)
T KOG3121|consen 54 NVRIGRYCVLKSRSVIRPPMKIFSKGPAFFPVHIGDHVFIEEECVV------------NAAQIGSYVHLGKNAVIGRRCV 121 (184)
T ss_pred cceEcceEEeccccccCCchHHhcCCceeeeeeecceEEEecceEe------------ehhhheeeeEeccceeEcCceE
Confidence 47899988887654331 1236899999999999988 4446777777777777777777
Q ss_pred eCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1643 VSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1643 ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
+-|-|.|-.++++|.+.-+|+.+.+.|+|+
T Consensus 122 lkdCc~ild~tVlPpet~vppy~~~~g~p~ 151 (184)
T KOG3121|consen 122 LKDCCRILDDTVLPPETLVPPYSTIGGNPA 151 (184)
T ss_pred hhhheeccCCcccCcccccCCceEEcCCCc
Confidence 777777888888888888999999999996
No 385
>TIGR03219 salicylate_mono salicylate 1-monooxygenase. Members of this protein family are salicylate 1-monooxygenase, also called salicylate hydroxylase. This enzyme converts salicylate to catechol, which is a common intermediate in the degradation of a number of aromatic compounds (phenol, toluene, benzoate, etc.). The gene for this protein may occur in catechol degradation genes, such as those of the meta-cleavage pathway.
Probab=97.91 E-value=4.1e-05 Score=99.73 Aligned_cols=49 Identities=18% Similarity=0.205 Sum_probs=38.1
Q ss_pred HHHHHHHHhHC-CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 189 TSLWQKLSKYL-PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 189 ~~l~~~la~~l-g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
..|.+.|.+.+ +..++++++|++|+.+++++ .+...+| +++++|.||.|
T Consensus 105 ~~l~~~L~~~~~~~~v~~~~~v~~i~~~~~~~--~v~~~~g--~~~~ad~vVgA 154 (414)
T TIGR03219 105 ADFLDALLKHLPEGIASFGKRATQIEEQAEEV--QVLFTDG--TEYRCDLLIGA 154 (414)
T ss_pred HHHHHHHHHhCCCceEEcCCEEEEEEecCCcE--EEEEcCC--CEEEeeEEEEC
Confidence 34667777766 35689999999999888866 5555677 47899999998
No 386
>PRK05350 acyl carrier protein; Provisional
Probab=97.91 E-value=2.2e-05 Score=76.03 Aligned_cols=76 Identities=20% Similarity=0.318 Sum_probs=70.5
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
..++.+++.++.++.+++++++|..+.+| -++|-|||..+.++..+.++||++++..++.+.+|++++++++.+..
T Consensus 4 ~~~i~~~v~~ii~~~~~~~~~~i~~d~~l~~dlg~DSld~veli~~lE~~fgI~i~~~~~~~~~Tv~dlv~~v~~~~ 80 (82)
T PRK05350 4 REEILERLRAILVELFEIDPEDITPEANLYEDLDLDSIDAVDLVVHLQKLTGKKIKPEEFKSVRTVQDVVDAVERLL 80 (82)
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCCCccchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHhhcCcHHHHHHHHHHHh
Confidence 45678899999999999999999999997 59999999999999999999999999999999999999999998653
No 387
>PRK08013 oxidoreductase; Provisional
Probab=97.91 E-value=4.8e-05 Score=98.55 Aligned_cols=37 Identities=32% Similarity=0.454 Sum_probs=33.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+++||+|||||++||++|+.|+++|+ +|+|+|+++..
T Consensus 2 ~~~dV~IvGaGpaGl~~A~~La~~G~-~v~viE~~~~~ 38 (400)
T PRK08013 2 QSVDVVIAGGGMVGLAVACGLQGSGL-RVAVLEQRVPE 38 (400)
T ss_pred CcCCEEEECcCHHHHHHHHHHhhCCC-EEEEEeCCCCc
Confidence 35799999999999999999999999 69999998753
No 388
>PRK08243 4-hydroxybenzoate 3-monooxygenase; Validated
Probab=97.91 E-value=6.3e-05 Score=97.20 Aligned_cols=35 Identities=31% Similarity=0.563 Sum_probs=32.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
+.||+|||||++||++|+.|+++|+ +|+|+||++.
T Consensus 2 ~~dV~IvGaGpaGl~~A~~L~~~G~-~v~v~E~~~~ 36 (392)
T PRK08243 2 RTQVAIIGAGPAGLLLGQLLHLAGI-DSVVLERRSR 36 (392)
T ss_pred cceEEEECCCHHHHHHHHHHHhcCC-CEEEEEcCCc
Confidence 5799999999999999999999999 6999999875
No 389
>PRK07494 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=97.90 E-value=5e-05 Score=98.20 Aligned_cols=37 Identities=41% Similarity=0.673 Sum_probs=33.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+++||+|||||++||++|+.|+++|+ +|+|+|+++..
T Consensus 6 ~~~dViIVGaG~~Gl~~A~~L~~~G~-~v~liE~~~~~ 42 (388)
T PRK07494 6 EHTDIAVIGGGPAGLAAAIALARAGA-SVALVAPEPPY 42 (388)
T ss_pred CCCCEEEECcCHHHHHHHHHHhcCCC-eEEEEeCCCCC
Confidence 45799999999999999999999999 69999998654
No 390
>PRK05714 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Provisional
Probab=97.90 E-value=5.7e-05 Score=98.17 Aligned_cols=35 Identities=34% Similarity=0.375 Sum_probs=32.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.+||+|||||++||++|+.|+++|+ +|+|+|+.+.
T Consensus 2 ~~dV~IVGaG~aGl~~A~~L~~~G~-~v~viE~~~~ 36 (405)
T PRK05714 2 RADLLIVGAGMVGSALALALQGSGL-EVLLLDGGPL 36 (405)
T ss_pred CccEEEECccHHHHHHHHHHhcCCC-EEEEEcCCCc
Confidence 4699999999999999999999999 6999999864
No 391
>PRK07333 2-octaprenyl-6-methoxyphenyl hydroxylase; Provisional
Probab=97.90 E-value=5.6e-05 Score=98.30 Aligned_cols=34 Identities=32% Similarity=0.447 Sum_probs=31.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCC--CCceEEEecCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLG--YRNVTLLEKYHT 56 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G--~~~VtVlEk~~r 56 (2280)
+||+|||||++||++|..|+++| + +|+|+||++.
T Consensus 2 ~dv~IvGaG~aGl~~A~~L~~~g~g~-~v~liE~~~~ 37 (403)
T PRK07333 2 CDVVIAGGGYVGLALAVALKQAAPHL-PVTVVDAAPA 37 (403)
T ss_pred CCEEEECccHHHHHHHHHHhcCCCCC-EEEEEeCCCc
Confidence 68999999999999999999996 8 6999999864
No 392
>PRK06753 hypothetical protein; Provisional
Probab=97.90 E-value=5.3e-05 Score=97.41 Aligned_cols=35 Identities=37% Similarity=0.606 Sum_probs=32.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+||+|||||++||++|..|+++|+ +|+|+||++.+
T Consensus 1 ~~V~IvGgG~aGl~~A~~L~~~g~-~v~v~E~~~~~ 35 (373)
T PRK06753 1 MKIAIIGAGIGGLTAAALLQEQGH-EVKVFEKNESV 35 (373)
T ss_pred CEEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCcc
Confidence 489999999999999999999999 69999998765
No 393
>PRK07538 hypothetical protein; Provisional
Probab=97.89 E-value=4.9e-05 Score=98.91 Aligned_cols=35 Identities=31% Similarity=0.519 Sum_probs=32.3
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+||+|||||++||++|+.|+++|+ +|+|+|+++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 35 (413)
T PRK07538 1 MKVLIAGGGIGGLTLALTLHQRGI-EVVVFEAAPEL 35 (413)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-cEEEEEcCCcc
Confidence 589999999999999999999999 69999998654
No 394
>PRK05732 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.89 E-value=6e-05 Score=97.75 Aligned_cols=36 Identities=39% Similarity=0.618 Sum_probs=32.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC---CCCceEEEecCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKL---GYRNVTLLEKYH 55 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~---G~~~VtVlEk~~ 55 (2280)
|++.||+|||||++||++|+.|+++ |+ +|+||||..
T Consensus 1 m~~~dv~IvGaG~aGl~~A~~L~~~~~~G~-~v~v~E~~~ 39 (395)
T PRK05732 1 MSRMDVIIVGGGMAGATLALALSRLSHGGL-PVALIEAFA 39 (395)
T ss_pred CCcCCEEEECcCHHHHHHHHHhhhcccCCC-EEEEEeCCC
Confidence 3568999999999999999999998 99 699999963
No 395
>PRK07608 ubiquinone biosynthesis hydroxylase family protein; Provisional
Probab=97.89 E-value=6.6e-05 Score=97.13 Aligned_cols=36 Identities=39% Similarity=0.482 Sum_probs=33.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+.||+|||||++||++|+.|++.|+ +|+|+||+...
T Consensus 5 ~~dv~IvGgG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 40 (388)
T PRK07608 5 KFDVVVVGGGLVGASLALALAQSGL-RVALLAPRAPP 40 (388)
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC-eEEEEecCCCc
Confidence 5799999999999999999999999 69999998764
No 396
>PRK06175 L-aspartate oxidase; Provisional
Probab=97.88 E-value=0.00011 Score=95.29 Aligned_cols=39 Identities=23% Similarity=0.276 Sum_probs=34.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
.+.||+|||+|.|||+||..++ +|. +|+|+||.+..||.
T Consensus 3 ~~~DVvVVG~G~AGl~AA~~a~-~G~-~V~lleK~~~~gg~ 41 (433)
T PRK06175 3 LYADVLIVGSGVAGLYSALNLR-KDL-KILMVSKGKLNECN 41 (433)
T ss_pred ccccEEEECchHHHHHHHHHhc-cCC-CEEEEecCCCCCCc
Confidence 4579999999999999999985 688 69999999998874
No 397
>PRK06475 salicylate hydroxylase; Provisional
Probab=97.88 E-value=0.0001 Score=95.60 Aligned_cols=35 Identities=40% Similarity=0.551 Sum_probs=32.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.+|+|||||++||++|..|+++|+ +|+|+||.+..
T Consensus 3 ~~V~IvGgGiaGl~~A~~L~~~G~-~V~i~E~~~~~ 37 (400)
T PRK06475 3 GSPLIAGAGVAGLSAALELAARGW-AVTIIEKAQEL 37 (400)
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCcc
Confidence 689999999999999999999999 69999998754
No 398
>COG0578 GlpA Glycerol-3-phosphate dehydrogenase [Energy production and conversion]
Probab=97.87 E-value=0.00023 Score=91.09 Aligned_cols=41 Identities=29% Similarity=0.400 Sum_probs=37.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||++|+..|..++-+|+ +|+++|++|--.|-.
T Consensus 11 ~~~DviVIGGGitG~GiArDaA~RGl-~v~LvE~~D~AsGTS 51 (532)
T COG0578 11 EEFDVIVIGGGITGAGIARDAAGRGL-KVALVEKGDLASGTS 51 (532)
T ss_pred cCCCEEEECCchhhHHHHHHHHhCCC-eEEEEecCcccCccc
Confidence 67899999999999999999999999 699999999988843
No 399
>PF03321 GH3: GH3 auxin-responsive promoter; InterPro: IPR004993 Transcription of the gene family, GH3, has been shown to be specifically induced by the plant hormone auxin. The auxin-responsive GH3 gene promoter is composed of multiple auxin response elements (AuxREs), and each AuxRE contributes incrementally to the strong auxin inducibility to the promoter.; PDB: 4EPL_A 4EQ4_B 4EWV_B 4EQL_B 4EPM_A.
Probab=97.86 E-value=0.00027 Score=93.50 Aligned_cols=61 Identities=25% Similarity=0.428 Sum_probs=47.5
Q ss_pred CCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE---CC--eEEEEecCCCeEEECCeeech
Q 037878 851 EPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII---DG--KFFITGRIKDLIIVAGRNVYS 925 (2280)
Q Consensus 851 p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~---dG--~l~~~GR~dd~IKi~G~rI~~ 925 (2280)
..|+.-||+|... .|.|. ||.||++++. ++ .+.|+||.+.++.+.|+++.-
T Consensus 353 e~G~~YelviTt~---~GLyR---------------------Y~iGDvVrv~gf~~~~P~i~F~~R~~~~l~l~gEkl~e 408 (528)
T PF03321_consen 353 EVGEEYELVITTN---SGLYR---------------------YRIGDVVRVTGFYNQTPRIEFVGRRGQVLSLFGEKLSE 408 (528)
T ss_dssp -TT-EEEEEEEST---TS-SS---------------------EEECEEEEEEEEETTEEEEEEEEETTEEE-SSS--EEH
T ss_pred cCCCeEEEEEecc---cceee---------------------eecCCEEEEeeccCCCcEEEEeccCCceeecceeecCH
Confidence 5788999999764 24441 7999999994 67 899999999999999999999
Q ss_pred HHHHHHHHhc
Q 037878 926 ADVEKTVESS 935 (2280)
Q Consensus 926 ~EIE~~L~~~ 935 (2280)
.+|+++|.+.
T Consensus 409 ~~v~~av~~~ 418 (528)
T PF03321_consen 409 EQVQEAVARA 418 (528)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9999999876
No 400
>PRK06134 putative FAD-binding dehydrogenase; Reviewed
Probab=97.86 E-value=0.00027 Score=95.44 Aligned_cols=46 Identities=28% Similarity=0.381 Sum_probs=40.8
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
....+.||+|||+|.+|++||+.++++|. +|+|+||++.+||.+..
T Consensus 8 ~~~~~~dvvvvG~G~aG~~aa~~~~~~g~-~v~~iek~~~~gg~~~~ 53 (581)
T PRK06134 8 PPDLECDVLVIGSGAAGLSAAVTAAWHGL-KVIVVEKDPVFGGTTAW 53 (581)
T ss_pred CCCCccCEEEECcCHHHHHHHHHHHHCCC-eEEEEecCCCCCccccc
Confidence 34557899999999999999999999998 69999999999997644
No 401
>PF06039 Mqo: Malate:quinone oxidoreductase (Mqo); InterPro: IPR006231 The membrane-associated enzyme, malate:quinone-oxidoreductase, is an alternative to the better-known NAD-dependent malate dehydrogenase as part of the TCA cycle. The reduction of a quinone rather than NAD+ makes the reaction essentially irreversible in the direction of malate oxidation to oxaloacetate. Both forms of malate dehydrogenase are active in Escherichia coli; disruption of this form causes less phenotypic change. In some bacteria, this form is the only or the more important malate dehydrogenase []. ; GO: 0008924 malate dehydrogenase (quinone) activity, 0006099 tricarboxylic acid cycle, 0055114 oxidation-reduction process
Probab=97.86 E-value=0.00036 Score=86.17 Aligned_cols=54 Identities=26% Similarity=0.344 Sum_probs=40.8
Q ss_pred HHHHHHHHHh----HCCCceEeCcceEEEEEcCCc-cEEEEEe-CCCceEEEEeCEEEEc
Q 037878 188 YTSLWQKLSK----YLPTEVHCNSEVLAIRRDSTT-VGVDVKH-SNGECEVMEFDKIIIS 241 (2280)
Q Consensus 188 ~~~l~~~la~----~lg~~I~l~t~V~~I~~~~~~-v~V~v~t-~~G~~~~i~aD~VI~A 241 (2280)
+..|.+.+.+ .-|.++++|++|++|++.+++ |.|.+++ .+|+..+++++.|++.
T Consensus 180 FG~LTr~l~~~l~~~~~~~~~~~~eV~~i~r~~dg~W~v~~~~~~~~~~~~v~a~FVfvG 239 (488)
T PF06039_consen 180 FGALTRQLVEYLQKQKGFELHLNHEVTDIKRNGDGRWEVKVKDLKTGEKREVRAKFVFVG 239 (488)
T ss_pred HHHHHHHHHHHHHhCCCcEEEecCEeCeeEECCCCCEEEEEEecCCCCeEEEECCEEEEC
Confidence 4445555544 337899999999999998776 8777754 4555578999999997
No 402
>PRK08850 2-octaprenyl-6-methoxyphenol hydroxylase; Validated
Probab=97.85 E-value=7.4e-05 Score=97.06 Aligned_cols=36 Identities=28% Similarity=0.480 Sum_probs=32.9
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
||..+||+|||||++||++|..|+++|+ +|+|+|+.
T Consensus 1 ~m~~~dV~IvGaG~~Gl~~A~~L~~~G~-~v~viE~~ 36 (405)
T PRK08850 1 MMQSVDVAIIGGGMVGLALAAALKESDL-RIAVIEGQ 36 (405)
T ss_pred CCCcCCEEEECccHHHHHHHHHHHhCCC-EEEEEcCC
Confidence 4456899999999999999999999999 69999996
No 403
>PRK06185 hypothetical protein; Provisional
Probab=97.85 E-value=9.8e-05 Score=96.15 Aligned_cols=37 Identities=43% Similarity=0.621 Sum_probs=33.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
+++.||+|||||++|+++|+.|+++|+ +|+|+|++..
T Consensus 4 ~~~~dV~IvGgG~~Gl~~A~~La~~G~-~v~liE~~~~ 40 (407)
T PRK06185 4 VETTDCCIVGGGPAGMMLGLLLARAGV-DVTVLEKHAD 40 (407)
T ss_pred cccccEEEECCCHHHHHHHHHHHhCCC-cEEEEecCCc
Confidence 456899999999999999999999999 6999999753
No 404
>TIGR01292 TRX_reduct thioredoxin-disulfide reductase. This model describes thioredoxin-disulfide reductase, a member of the pyridine nucleotide-disulphide oxidoreductases (PFAM:PF00070).
Probab=97.85 E-value=9.9e-05 Score=91.80 Aligned_cols=38 Identities=29% Similarity=0.509 Sum_probs=34.3
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+||+|||||++||+||..|++.|+ +|+|+|+++ .||.+
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~-~gg~~ 38 (300)
T TIGR01292 1 YDVIIIGAGPAGLTAAIYAARANL-KTLIIEGME-PGGQL 38 (300)
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC-CEEEEeccC-CCcce
Confidence 489999999999999999999999 699999986 77754
No 405
>PRK09184 acyl carrier protein; Provisional
Probab=97.84 E-value=3.9e-05 Score=74.65 Aligned_cols=73 Identities=19% Similarity=0.275 Sum_probs=65.0
Q ss_pred hHHHHHHHHHHHHHhCC---CCccccCCCChhh--cccchHHHHHHHHHHHHHhCCccCc---ccccCcccHHHHHHHHH
Q 037878 1080 KDIVEFLKGLVSEQTGI---PITKVSATDSLVS--YGIDSIGVVRAAQKLSDFLGVPVGA---VDIFTATCIADLASFSE 1151 (2280)
Q Consensus 1080 ~~~e~~l~~iw~~vLg~---~~~~i~~~~~Ff~--lGGdSL~a~~l~~~l~~~~g~~l~~---~di~~~pti~~LA~~l~ 1151 (2280)
+++++.|+++.++.|++ ++++|..+++||. ||.|||.++.++..+.+.||+.++. ..+...+|+++|++++.
T Consensus 5 ~~l~~~l~~~I~e~l~~~~i~~~~I~~d~~l~~~dLglDSld~velv~~lE~~fgi~i~~~~~~~~~~~~TV~~l~~~I~ 84 (89)
T PRK09184 5 TALERELAELIVEELNLEDVQPESIDADAPLYGEGLGLDSIDILEIALVISKRYGFQLRSDNPDNQRIFASLRALAAYVA 84 (89)
T ss_pred HHHHHHHHHHHHHHHCCCCCCHHHCCCCcccccccCCCcHHHHHHHHHHHHHHHCCcCCCcchhhhhccCCHHHHHHHHH
Confidence 56788999999999995 7789999999864 9999999999999999999999964 34667899999999997
Q ss_pred h
Q 037878 1152 N 1152 (2280)
Q Consensus 1152 ~ 1152 (2280)
.
T Consensus 85 ~ 85 (89)
T PRK09184 85 A 85 (89)
T ss_pred H
Confidence 6
No 406
>PRK12835 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=97.83 E-value=0.00023 Score=95.81 Aligned_cols=43 Identities=26% Similarity=0.432 Sum_probs=38.5
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+...+.||+|||+|++||+||+.++++|. +|+|+||.+..||.
T Consensus 7 ~~~~~~DVvVVG~G~AGl~AA~~aae~G~-~VivlEk~~~~gG~ 49 (584)
T PRK12835 7 NFDREVDVLVVGSGGGGMTAALTAAARGL-DTLVVEKSAHFGGS 49 (584)
T ss_pred CccCcCCEEEECccHHHHHHHHHHHHCCC-cEEEEEcCCCCCch
Confidence 34456899999999999999999999998 69999999999984
No 407
>TIGR00517 acyl_carrier acyl carrier protein. S (Ser) at position 37 in the seed alignment, in the motif DSLD, is the phosphopantetheine attachment site.
Probab=97.83 E-value=3.5e-05 Score=73.88 Aligned_cols=72 Identities=21% Similarity=0.349 Sum_probs=67.3
Q ss_pred HHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1081 DIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1081 ~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
++.++++++.++.++++++.+..+++|+ ++|.|||..+.++..+.++||+.++..++.+..|++++++++.+
T Consensus 3 ~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlglDSl~~veli~~lE~~f~i~i~~~~~~~~~tv~~l~~~i~~ 75 (77)
T TIGR00517 3 EIFEKVKAIIKEQLNVDEDQVTPDASFVEDLGADSLDTVELVMALEEEFDIEIPDEEAEKIATVGDAVDYIEE 75 (77)
T ss_pred HHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHCCcHHHHHHHHHh
Confidence 5678999999999999988899999997 79999999999999999999999999999999999999999975
No 408
>PRK12449 acyl carrier protein; Provisional
Probab=97.81 E-value=5.5e-05 Score=73.15 Aligned_cols=74 Identities=19% Similarity=0.274 Sum_probs=69.4
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
..++.+++.++.++.++.++..+..+.+|. ++|-||+..+.+...+.++||+.++..++.+.+|++++++++.+
T Consensus 3 ~~~i~~~l~~il~~~~~~~~~~i~~~~~l~~dlg~DSl~~~~li~~lE~~f~i~i~~~~~~~~~ti~~l~~~l~~ 77 (80)
T PRK12449 3 REEIFERLINLIQKQRSYLSLAITEQTHLKDDLAVDSIELVEFIINVEDEFHIAIPDEDVEDMVSMGDLLDYLVQ 77 (80)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCcHHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 456788999999999999888999999996 99999999999999999999999999999999999999999975
No 409
>PF14602 Hexapep_2: Hexapeptide repeat of succinyl-transferase; PDB: 2P2O_B 2IC7_B 2RIJ_A 3FSY_B 3FSX_D 3CJ8_A 1QRE_A 1QRG_A 1THJ_B 1QRM_A ....
Probab=97.79 E-value=2.4e-05 Score=61.05 Aligned_cols=34 Identities=21% Similarity=0.475 Sum_probs=27.0
Q ss_pred eEEEccCeEEccceeEcCCcEeCCCceecccceeec
Q 037878 2238 KIRIGEGGFVGSRAAAMPGVRIENGGSLSSLSLAMK 2273 (2280)
Q Consensus 2238 ~~~~~~~~~~g~~~~~~~g~~~~~~~~~~~~s~~~~ 2273 (2280)
|++||++||||++|++ |++|||+++|+++++++|
T Consensus 1 pv~IG~~~~ig~~~~i--gi~igd~~~i~~g~~I~~ 34 (34)
T PF14602_consen 1 PVTIGDNCFIGANSTI--GITIGDGVIIGAGVVITA 34 (34)
T ss_dssp TEEE-TTEEE-TT-EE--TSEE-TTEEE-TTEEEES
T ss_pred CeEECCCEEECccccc--CCEEcCCCEECCCCEEcC
Confidence 6899999999999998 799999999999999875
No 410
>PRK08020 ubiF 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Reviewed
Probab=97.78 E-value=0.00012 Score=94.79 Aligned_cols=36 Identities=42% Similarity=0.611 Sum_probs=32.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
+++||+|||||++|+++|..|+++|+ +|+|+|+...
T Consensus 4 ~~~dViIvGgG~aGl~~A~~La~~G~-~V~liE~~~~ 39 (391)
T PRK08020 4 QPTDIAIVGGGMVGAALALGLAQHGF-SVAVLEHAAP 39 (391)
T ss_pred ccccEEEECcCHHHHHHHHHHhcCCC-EEEEEcCCCC
Confidence 45799999999999999999999999 6999999753
No 411
>PRK05868 hypothetical protein; Validated
Probab=97.77 E-value=0.00018 Score=91.99 Aligned_cols=35 Identities=29% Similarity=0.544 Sum_probs=32.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+||+|||||++||++|+.|+++|+ +|+|+|+++..
T Consensus 2 ~~V~IvGgG~aGl~~A~~L~~~G~-~v~viE~~~~~ 36 (372)
T PRK05868 2 KTVVVSGASVAGTAAAYWLGRHGY-SVTMVERHPGL 36 (372)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-CEEEEcCCCCC
Confidence 589999999999999999999999 69999998654
No 412
>PLN02697 lycopene epsilon cyclase
Probab=97.77 E-value=0.0021 Score=84.60 Aligned_cols=48 Identities=31% Similarity=0.400 Sum_probs=36.9
Q ss_pred ccccccccCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 7 IDDQFCKLHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 7 ~~~~~~~~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
|+.++.... +.....||+|||||++||++|..|+++|+ +|+|+|+...
T Consensus 95 ~~~~~~~~~-~~~~~~DVvIVGaGPAGLalA~~Lak~Gl-~V~LIe~~~p 142 (529)
T PLN02697 95 IADKLPPIS-IGDGTLDLVVIGCGPAGLALAAESAKLGL-NVGLIGPDLP 142 (529)
T ss_pred ccccCCCCC-cccCcccEEEECcCHHHHHHHHHHHhCCC-cEEEecCccc
Confidence 444444333 23345899999999999999999999999 6999998543
No 413
>TIGR02023 BchP-ChlP geranylgeranyl reductase. This model represents a group of geranylgeranyl reductases specific for the biosyntheses of bacteriochlorophyll and chlorophyll. It is unclear whether the processes of isoprenoid ligation to the chlorin ring and reduction of the geranylgeranyl chain to a phytyl chain are necessarily ordered the same way in all species (see introduction to ).
Probab=97.77 E-value=0.0001 Score=95.12 Aligned_cols=32 Identities=41% Similarity=0.742 Sum_probs=30.5
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
+||+|||||+||++||+.|+++|+ +|+|+|++
T Consensus 1 yDVvIVGaGpAG~~aA~~La~~G~-~V~l~E~~ 32 (388)
T TIGR02023 1 YDVAVIGGGPSGATAAETLARAGI-ETILLERA 32 (388)
T ss_pred CeEEEECCCHHHHHHHHHHHhCCC-cEEEEECC
Confidence 589999999999999999999999 69999997
No 414
>PF13193 AMP-binding_C: AMP-binding enzyme C-terminal domain; PDB: 3L8C_B 2VSQ_A 3R44_A 3RG2_B 3A9U_A 3A9V_A 3NI2_A 1V26_B 1ULT_B 1V25_B ....
Probab=97.77 E-value=3.5e-05 Score=73.11 Aligned_cols=72 Identities=21% Similarity=0.442 Sum_probs=48.7
Q ss_pred HHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEE
Q 037878 927 DVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVK 1006 (2280)
Q Consensus 927 EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~ 1006 (2280)
|||++|.+||+|.+ |+|++.+++..++ ...++++. ..+++.++++++|+. ++.|. ...
T Consensus 1 EIE~~l~~~~~V~~---~~V~~~~d~~~g~---------~l~a~vv~--------~~~~i~~~~~~~l~~-~~~P~-~~~ 58 (73)
T PF13193_consen 1 EIESVLRQHPGVAE---AAVVGVPDEDWGE---------RLVAFVVL--------DEEEIRDHLRDKLPP-YMVPR-RIR 58 (73)
T ss_dssp HHHHHHHTSTTEEE---EEEEEEEETTTEE---------EEEEEEEE--------HHHHHHHHHHHHS-G-GGS-S-EEE
T ss_pred CHHHHHhcCCCccE---EEEEEEEcccccc---------cceeEEEe--------eecccccchhhhCCC-cceee-EEE
Confidence 89999999999875 9999988764331 22333332 225777777777664 56563 255
Q ss_pred EecCCC-ccCCCCcc
Q 037878 1007 LIKPRT-MSKTTSGK 1020 (2280)
Q Consensus 1007 lv~~~~-lP~t~sGK 1020 (2280)
++.+++ ||+|+|||
T Consensus 59 ~v~~~~~lP~t~~GK 73 (73)
T PF13193_consen 59 FVRLDEELPRTPSGK 73 (73)
T ss_dssp EEEESSSEEBETTSS
T ss_pred EccccCcCCCCCCCC
Confidence 555577 99999999
No 415
>PF14602 Hexapep_2: Hexapeptide repeat of succinyl-transferase; PDB: 2P2O_B 2IC7_B 2RIJ_A 3FSY_B 3FSX_D 3CJ8_A 1QRE_A 1QRG_A 1THJ_B 1QRM_A ....
Probab=97.76 E-value=2.3e-05 Score=61.12 Aligned_cols=34 Identities=32% Similarity=0.468 Sum_probs=26.1
Q ss_pred CeEECCCcEEccCCeeCCCcEeCCCcEEccCccccC
Q 037878 1622 KVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPM 1657 (2280)
Q Consensus 1622 ~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~ 1657 (2280)
+++||++|+||.++.| |++|||+++|++++++++
T Consensus 1 pv~IG~~~~ig~~~~i--gi~igd~~~i~~g~~I~~ 34 (34)
T PF14602_consen 1 PVTIGDNCFIGANSTI--GITIGDGVIIGAGVVITA 34 (34)
T ss_dssp TEEE-TTEEE-TT-EE--TSEE-TTEEE-TTEEEES
T ss_pred CeEECCCEEECccccc--CCEEcCCCEECCCCEEcC
Confidence 5789999999999998 799999999999998864
No 416
>PRK12845 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=97.76 E-value=0.00013 Score=97.31 Aligned_cols=43 Identities=33% Similarity=0.529 Sum_probs=38.5
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
...+.||+|||+| +|++||+..++.|. +|+|+||.+.+||.+.
T Consensus 13 ~d~e~DvvvvG~G-~G~~aA~~a~~~G~-~v~v~Ek~~~~GG~~~ 55 (564)
T PRK12845 13 RDTTVDLLVVGSG-TGMAAALAAHELGL-SVLIVEKSSYVGGSTA 55 (564)
T ss_pred CCceeCEEEECCc-HHHHHHHHHHHCCC-cEEEEecCCCCcCccc
Confidence 3457899999999 89999999999998 6999999999999554
No 417
>COG3433 Aryl carrier domain [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.76 E-value=4e-05 Score=67.98 Aligned_cols=67 Identities=16% Similarity=0.332 Sum_probs=59.9
Q ss_pred HHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1085 FLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1085 ~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
.|++...++++..++++..++|...+|.|||.+|+++.+.|++ |..|+..+++++|||.+--+.+..
T Consensus 2 ~Lr~~~~~Ll~e~~~~l~dqeNLi~~GLDSiR~M~L~~~wR~~-G~~i~F~~La~~PTl~aW~qLl~~ 68 (74)
T COG3433 2 ALREQIAELLGESVEELDDQENLIDYGLDSIRMMALLERWRKR-GADIDFAQLAANPTLAAWWQLLST 68 (74)
T ss_pred cHHHHHHHHHcCChhhcCchhhHHHhchhHHHHHHHHHHHHHc-CCcccHHHHHhCccHHHHHHHHHh
Confidence 3556777888887888889999999999999999999999886 999999999999999999988865
No 418
>PF05834 Lycopene_cycl: Lycopene cyclase protein; InterPro: IPR008671 This family consists of lycopene beta and epsilon cyclase proteins. Carotenoids with cyclic end groups are essential components of the photosynthetic membranes in all plants, algae, and cyanobacteria. These lipid-soluble compounds protect against photo-oxidation, harvest light for photosynthesis, and dissipate excess light energy absorbed by the antenna pigments. The cyclisation of lycopene (psi, psi-carotene) is a key branch point in the pathway of carotenoid biosynthesis. Two types of cyclic end groups are found in higher plant carotenoids: the beta and epsilon rings. Carotenoids with two beta rings are ubiquitous, and those with one beta and one epsilon ring are common; however, carotenoids with two epsilon rings are rare [].; GO: 0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 0016117 carotenoid biosynthetic process
Probab=97.76 E-value=0.00089 Score=85.60 Aligned_cols=34 Identities=41% Similarity=0.589 Sum_probs=31.4
Q ss_pred eEEEECccHHHHHHHHHH--HhCCCCceEEEecCCCC
Q 037878 23 RIGIVGGGPSGLSTAYAL--AKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~L--a~~G~~~VtVlEk~~ri 57 (2280)
||+|||||+|||++|++| ++.|. +|+|+|++...
T Consensus 1 DviIvGaGpAGlslA~~l~~~~~g~-~Vllid~~~~~ 36 (374)
T PF05834_consen 1 DVIIVGAGPAGLSLARRLADARPGL-SVLLIDPKPKP 36 (374)
T ss_pred CEEEECCcHHHHHHHHHHHhcCCCC-EEEEEcCCccc
Confidence 899999999999999999 77888 69999998776
No 419
>PRK12842 putative succinate dehydrogenase; Reviewed
Probab=97.75 E-value=0.00012 Score=98.98 Aligned_cols=43 Identities=35% Similarity=0.560 Sum_probs=39.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
.+.||+|||||++||+||+.++++|. +|+|+||.+.+||....
T Consensus 8 ~~~DVvVVG~G~aGl~AA~~aa~~G~-~v~llEk~~~~gG~~~~ 50 (574)
T PRK12842 8 LTCDVLVIGSGAGGLSAAITARKLGL-DVVVLEKEPVFGGTTAF 50 (574)
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCC-eEEEEecCCCCCCccce
Confidence 36799999999999999999999998 69999999999996543
No 420
>PRK07573 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.75 E-value=0.00012 Score=99.42 Aligned_cols=39 Identities=31% Similarity=0.410 Sum_probs=35.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
.+.||+|||||+|||+||+.+++.|. +|+|+||...+||
T Consensus 34 ~~~DVlVVG~G~AGl~AAi~Aae~G~-~VilieK~~~~~~ 72 (640)
T PRK07573 34 RKFDVIVVGTGLAGASAAATLGELGY-NVKVFCYQDSPRR 72 (640)
T ss_pred cccCEEEECccHHHHHHHHHHHHcCC-cEEEEecCCCCCc
Confidence 46799999999999999999999998 6999999887764
No 421
>smart00823 PKS_PP Phosphopantetheine attachment site. Phosphopantetheine (or pantetheine 4' phosphate) is the prosthetic group of acyl carrier proteins (ACP) in some multienzyme complexes where it serves as a 'swinging arm' for the attachment of activated fatty acid and amino-acid groups PUBMED:5321311.
Probab=97.75 E-value=7.8e-05 Score=72.96 Aligned_cols=73 Identities=18% Similarity=0.296 Sum_probs=65.3
Q ss_pred hHHHHHHHHHHHHHhCCCCcc-ccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1080 KDIVEFLKGLVSEQTGIPITK-VSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1080 ~~~e~~l~~iw~~vLg~~~~~-i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
...+..+.+.|.++++.+... ++.+++||++|+||+.++++...+++.+++.++..+++++||+.+|++++.+
T Consensus 11 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~dSl~~~~~~~~l~~~~~~~i~~~~~~~~~t~~~l~~~i~~ 84 (86)
T smart00823 11 RLLLDLVREQVAAVLGHAAAEAIDPDRPFRDLGLDSLTAVELRNRLEAATGLRLPATLVFDHPTPAALAEHLAA 84 (86)
T ss_pred HHHHHHHHHHHHHHHCCCccccCCCCCCHHHcCchHHHHHHHHHHHHHHHCCCCChHHHHcCCCHHHHHHHHHH
Confidence 445678999999999987655 4889999999999999999999999999999999999999999999998864
No 422
>KOG3121 consensus Dynactin, subunit p25 [Cytoskeleton]
Probab=97.73 E-value=4.8e-05 Score=76.26 Aligned_cols=92 Identities=17% Similarity=0.307 Sum_probs=71.9
Q ss_pred HcCCEECCCcEECccccCCC-----------CceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCC
Q 037878 1315 MLGAKLGSSVLLDTVDITDP-----------SLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKG 1383 (2280)
Q Consensus 1315 ~lGa~Ig~~v~i~~~~~~~~-----------~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg 1383 (2280)
+...|||+.|.+.+....-| -.+.|||+++|+++|++....+. .-|.||+||.||.+|++..-
T Consensus 52 LAnVr~GryCV~ksrsvIRPp~K~FSKg~affp~hiGdhVFieE~cVVnAAqIg------syVh~GknaviGrrCVlkdC 125 (184)
T KOG3121|consen 52 LANVRIGRYCVLKSRSVIRPPMKIFSKGPAFFPVHIGDHVFIEEECVVNAAQIG------SYVHLGKNAVIGRRCVLKDC 125 (184)
T ss_pred cccceEcceEEeccccccCCchHHhcCCceeeeeeecceEEEecceEeehhhhe------eeeEeccceeEcCceEhhhh
Confidence 34578899888854322222 24889999999999998765541 23568999999999999999
Q ss_pred CEECCCCEECcCCccCCCCccccCCCceee
Q 037878 1384 SVIGEEAEVAPLQKSEGGKPILKSTNANYV 1413 (2280)
Q Consensus 1384 ~~ig~~a~ig~~s~v~~~~~~~~g~p~~~~ 1413 (2280)
++|-|++++-|-+.+++-+++ .|+|+...
T Consensus 126 c~ild~tVlPpet~vppy~~~-~g~p~~~~ 154 (184)
T KOG3121|consen 126 CRILDDTVLPPETLVPPYSTI-GGNPAQVV 154 (184)
T ss_pred eeccCCcccCcccccCCceEE-cCCCceee
Confidence 999999999999999988888 88888865
No 423
>PRK09897 hypothetical protein; Provisional
Probab=97.73 E-value=0.00014 Score=95.29 Aligned_cols=42 Identities=33% Similarity=0.618 Sum_probs=35.2
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCCCCC-ceEEE
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYHTVG-GMCES 63 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~riG-G~~~t 63 (2280)
++|+|||||++|+++|.+|.+.+.. +|+|||++..+| |...+
T Consensus 2 ~~IAIIGgGp~Gl~~a~~L~~~~~~l~V~lfEp~~~~G~G~ays 45 (534)
T PRK09897 2 KKIAIVGAGPTGIYTFFSLLQQQTPLSISIFEQADEAGVGMPYS 45 (534)
T ss_pred CeEEEECCcHHHHHHHHHHHhcCCCCcEEEEecCCCCCcceeec
Confidence 5899999999999999999876431 699999999998 65444
No 424
>PRK07081 acyl carrier protein; Provisional
Probab=97.70 E-value=8.3e-05 Score=71.87 Aligned_cols=73 Identities=15% Similarity=0.244 Sum_probs=64.1
Q ss_pred HHHHHHHHHHHh--CCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccC--cccHHHHHHHHHhhhh
Q 037878 1083 VEFLKGLVSEQT--GIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFT--ATCIADLASFSENLVM 1155 (2280)
Q Consensus 1083 e~~l~~iw~~vL--g~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~--~pti~~LA~~l~~~~~ 1155 (2280)
++.++++..+.+ +.+++.++.+++|+++|-||+.+++++..|.+.||++++..++.. .+|+++|++++.....
T Consensus 2 ~~~i~~ii~~~~~~~~~~~~i~~d~~l~dlGlDSl~~v~li~~lE~~f~I~i~~~~~~~~~~~tv~~l~~~V~~~~~ 78 (83)
T PRK07081 2 KNTIRTILKKVAKLEVPIDSIADDADLYEAGLSSLATVQLMLAIEDAFDIEIPDEMLNRKLFASIDALAGAVTQLQD 78 (83)
T ss_pred hHHHHHHHHHHHcCCCCHHhcCCCCCHhhcCCCHHHHHHHHHHHHHHhCCcCCHHHcCHHHhccHHHHHHHHHHHHh
Confidence 467888999984 445568999999999999999999999999999999999998875 8999999999987654
No 425
>PRK12844 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=97.69 E-value=0.00028 Score=94.67 Aligned_cols=41 Identities=32% Similarity=0.480 Sum_probs=37.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||+|.+||+||+.|+++|. +|+||||++..||.+
T Consensus 5 ~~~DvvIiG~G~aGl~aA~~~a~~G~-~v~liEk~~~~gG~~ 45 (557)
T PRK12844 5 ETYDVVVVGSGGGGMCAALAAADSGL-EPLIVEKQDKVGGST 45 (557)
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCCCCcee
Confidence 36799999999999999999999998 699999999999964
No 426
>KOG2404 consensus Fumarate reductase, flavoprotein subunit [Energy production and conversion]
Probab=97.67 E-value=0.0003 Score=80.85 Aligned_cols=39 Identities=36% Similarity=0.548 Sum_probs=35.6
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
.|+|||+|.+||+|+-.+-..|- .|+++|++..+||..-
T Consensus 11 pvvVIGgGLAGLsasn~iin~gg-~V~llek~~s~GGNSi 49 (477)
T KOG2404|consen 11 PVVVIGGGLAGLSASNDIINKGG-IVILLEKAGSIGGNSI 49 (477)
T ss_pred cEEEECCchhhhhhHHHHHhcCC-eEEEEeccCCcCCcce
Confidence 59999999999999999999987 5999999999999543
No 427
>KOG1335 consensus Dihydrolipoamide dehydrogenase [Energy production and conversion]
Probab=97.67 E-value=0.00021 Score=84.38 Aligned_cols=44 Identities=36% Similarity=0.664 Sum_probs=40.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESV 64 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~ 64 (2280)
.++||+|||+|++|-.||+..+|.|+ +-+.+|+++.+||-|-..
T Consensus 38 ~d~DvvvIG~GpGGyvAAikAaQlGl-kTacvEkr~~LGGTcLnv 81 (506)
T KOG1335|consen 38 NDYDVVVIGGGPGGYVAAIKAAQLGL-KTACVEKRGTLGGTCLNV 81 (506)
T ss_pred ccCCEEEECCCCchHHHHHHHHHhcc-eeEEEeccCccCceeeec
Confidence 57999999999999999999999999 499999999999988553
No 428
>PRK05945 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.65 E-value=0.00029 Score=95.04 Aligned_cols=40 Identities=28% Similarity=0.529 Sum_probs=35.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC--CCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLG--YRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G--~~~VtVlEk~~riGG~ 60 (2280)
.+.||+|||||+|||+||+.++++| . +|+|+||....||.
T Consensus 2 ~~~DVlVIG~G~AGl~AAi~aa~~g~g~-~V~vleK~~~~gg~ 43 (575)
T PRK05945 2 LEHDVVIVGGGLAGCRAALEIKRLDPSL-DVAVVAKTHPIRSH 43 (575)
T ss_pred CcccEEEECccHHHHHHHHHHHHhcCCC-cEEEEeccCCCchh
Confidence 4579999999999999999999875 6 69999998877773
No 429
>PRK12837 3-ketosteroid-delta-1-dehydrogenase; Provisional
Probab=97.64 E-value=0.0006 Score=90.78 Aligned_cols=40 Identities=30% Similarity=0.552 Sum_probs=36.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+||||| +||+||+.++++|. +|+|+||....||.+
T Consensus 6 ~~~DVvVVG~G-aGl~aA~~aa~~G~-~V~vlEk~~~~Gg~t 45 (513)
T PRK12837 6 EEVDVLVAGSG-GGVAGAYTAAREGL-SVALVEATDKFGGTT 45 (513)
T ss_pred CccCEEEECch-HHHHHHHHHHHCCC-cEEEEecCCCCCcce
Confidence 36799999999 99999999999998 699999999999854
No 430
>PRK06617 2-octaprenyl-6-methoxyphenyl hydroxylase; Validated
Probab=97.64 E-value=0.00022 Score=91.44 Aligned_cols=33 Identities=33% Similarity=0.479 Sum_probs=31.0
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
.||+|||||++|+++|+.|++.|+ +|+|+|+.+
T Consensus 2 ~dV~IvGgG~~Gl~~A~~L~~~G~-~v~l~E~~~ 34 (374)
T PRK06617 2 SNTVILGCGLSGMLTALSFAQKGI-KTTIFESKS 34 (374)
T ss_pred ccEEEECCCHHHHHHHHHHHcCCC-eEEEecCCC
Confidence 589999999999999999999999 699999864
No 431
>PLN02927 antheraxanthin epoxidase/zeaxanthin epoxidase
Probab=97.63 E-value=0.00027 Score=94.11 Aligned_cols=49 Identities=22% Similarity=0.280 Sum_probs=38.7
Q ss_pred HHHHHHHHhHCCCc-eEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 189 TSLWQKLSKYLPTE-VHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 189 ~~l~~~la~~lg~~-I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
..|.+.|.+.++.+ ++++++|++|+.+++++ +++..+| +++++|.||.|
T Consensus 194 ~~L~~~L~~alg~~~i~~g~~V~~I~~~~d~V--tV~~~dG--~ti~aDlVVGA 243 (668)
T PLN02927 194 MTLQQILARAVGEDVIRNESNVVDFEDSGDKV--TVVLENG--QRYEGDLLVGA 243 (668)
T ss_pred HHHHHHHHhhCCCCEEEcCCEEEEEEEeCCEE--EEEECCC--CEEEcCEEEEC
Confidence 45777777777754 67899999999888865 5666777 47899999998
No 432
>PRK12843 putative FAD-binding dehydrogenase; Reviewed
Probab=97.63 E-value=0.00074 Score=91.12 Aligned_cols=43 Identities=30% Similarity=0.495 Sum_probs=38.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
.+.||+|||+|.+|++||+.++++|. +|+|+||++.+||.+..
T Consensus 15 ~~~dvvvvG~G~aG~~aa~~~~~~g~-~v~l~ek~~~~gg~~~~ 57 (578)
T PRK12843 15 AEFDVIVIGAGAAGMSAALFAAIAGL-KVLLVERTEYVGGTTAT 57 (578)
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCCCCCcccc
Confidence 35799999999999999999999998 69999999999996643
No 433
>PRK07117 acyl carrier protein; Validated
Probab=97.62 E-value=0.00013 Score=69.37 Aligned_cols=74 Identities=20% Similarity=0.249 Sum_probs=69.3
Q ss_pred hhHHHHHHHHHHHHHh-CCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1079 NKDIVEFLKGLVSEQT-GIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vL-g~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
..++.+.++++.++.+ ++++++|..+.+|.+||.|||..+.++..+.+.||+.++-.++-+-.|+++++.++.+
T Consensus 3 ~~ei~~~v~~ii~e~~p~i~~~~I~~~~~l~DLg~DSlD~veiv~~led~f~i~I~~~~~~~i~Tv~d~v~~i~~ 77 (79)
T PRK07117 3 KQRIFDILVRHIREVLPDLDQHQFQPEDSLVDLGANSMDRAEIVIMTLESLSLKIPLVEFAGAKNIGELADLLYA 77 (79)
T ss_pred HHHHHHHHHHHHHHHcCCCCHHHCCCCCChhhcCCChHHHHHHHHHHHHHHCCccCHHHHHhcCCHHHHHHHHHH
Confidence 3567789999999999 7999999999999999999999999999999999999999999999999999999875
No 434
>PRK05828 acyl carrier protein; Validated
Probab=97.62 E-value=0.00017 Score=69.46 Aligned_cols=76 Identities=13% Similarity=0.195 Sum_probs=69.1
Q ss_pred hhHHHHHHHHHHHH-HhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1079 NKDIVEFLKGLVSE-QTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~-vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
..++.+.+.++.++ .++.+.+.+..+.+|.+||.|||..+.++..+.+.||++++-.++.+..|++++..++.+..
T Consensus 3 ~~eI~~~i~~ii~e~~~~~~~d~i~~~~~~~dLg~DSLd~velv~~lE~~f~I~i~~e~~~~i~Tv~d~~~~v~~~~ 79 (84)
T PRK05828 3 EMEILLKIKEIAKKKNFAVTLDESNINKPYRELKIDSLDMFSIIVSLESEFNIEFSDEKLMKLKNLADLILEVKELK 79 (84)
T ss_pred HHHHHHHHHHHHHHhccCCCcccccCCCCHHhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence 45677889999997 68888888899999999999999999999999999999999999999999999999997644
No 435
>PRK15317 alkyl hydroperoxide reductase subunit F; Provisional
Probab=97.61 E-value=0.00025 Score=94.69 Aligned_cols=39 Identities=28% Similarity=0.506 Sum_probs=34.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
..+||+|||||++||+||.+|++.|+ +|+|+|+ ++||.+
T Consensus 210 ~~~dvvIIGgGpaGl~aA~~la~~G~-~v~li~~--~~GG~~ 248 (517)
T PRK15317 210 DPYDVLVVGGGPAGAAAAIYAARKGI-RTGIVAE--RFGGQV 248 (517)
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEec--CCCCee
Confidence 45799999999999999999999999 6999986 489865
No 436
>PRK11445 putative oxidoreductase; Provisional
Probab=97.60 E-value=0.00033 Score=88.96 Aligned_cols=34 Identities=32% Similarity=0.469 Sum_probs=31.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+||+|||||++|+++|+.|+++ + +|+|+|+++..
T Consensus 2 ~dV~IvGaGpaGl~~A~~La~~-~-~V~liE~~~~~ 35 (351)
T PRK11445 2 YDVAIIGLGPAGSALARLLAGK-M-KVIAIDKKHQC 35 (351)
T ss_pred ceEEEECCCHHHHHHHHHHhcc-C-CEEEEECCCcc
Confidence 6999999999999999999999 8 69999998764
No 437
>TIGR01989 COQ6 Ubiquinone biosynthesis mono0xygenase COQ6. This model represents the monooxygenase responsible for the 4-hydroxylateion of the phenol ring in the aerobic biosynthesis of ubiquinone
Probab=97.59 E-value=0.00033 Score=91.70 Aligned_cols=33 Identities=42% Similarity=0.606 Sum_probs=30.5
Q ss_pred CeEEEECccHHHHHHHHHHHh----CCCCceEEEecCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAK----LGYRNVTLLEKYH 55 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~----~G~~~VtVlEk~~ 55 (2280)
+||+|||||++||++|+.|++ +|+ +|+|+|+++
T Consensus 1 ~DV~IVGaGp~Gl~~A~~La~~~~~~G~-~v~viE~~~ 37 (437)
T TIGR01989 1 FDVVIVGGGPVGLALAAALGNNPLTKDL-KVLLLDAVD 37 (437)
T ss_pred CcEEEECCcHHHHHHHHHHhcCcccCCC-eEEEEeCCC
Confidence 489999999999999999999 899 699999954
No 438
>PLN02464 glycerol-3-phosphate dehydrogenase
Probab=97.58 E-value=0.0002 Score=96.91 Aligned_cols=39 Identities=31% Similarity=0.447 Sum_probs=35.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+++||+|||||+.|+++|+.|+++|. +|+|+||++..+|
T Consensus 70 ~~~DVvVIGGGi~Ga~~A~~lA~rGl-~V~LvE~~d~a~G 108 (627)
T PLN02464 70 EPLDVLVVGGGATGAGVALDAATRGL-RVGLVEREDFSSG 108 (627)
T ss_pred CccCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccccCCC
Confidence 45899999999999999999999999 6999999987666
No 439
>PRK08294 phenol 2-monooxygenase; Provisional
Probab=97.58 E-value=0.00057 Score=92.84 Aligned_cols=38 Identities=32% Similarity=0.482 Sum_probs=33.8
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHh-CCCCceEEEecCCC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAK-LGYRNVTLLEKYHT 56 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~-~G~~~VtVlEk~~r 56 (2280)
|+++.||+|||||++||++|..|++ .|+ +|+||||.+.
T Consensus 29 ~~~~~dVlIVGAGPaGL~lA~~Lar~~Gi-~v~IiE~~~~ 67 (634)
T PRK08294 29 LPDEVDVLIVGCGPAGLTLAAQLSAFPDI-TTRIVERKPG 67 (634)
T ss_pred CCCCCCEEEECCCHHHHHHHHHHhcCCCC-cEEEEEcCCC
Confidence 4567899999999999999999999 599 6999999753
No 440
>PRK06069 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.58 E-value=0.00095 Score=90.26 Aligned_cols=41 Identities=27% Similarity=0.378 Sum_probs=36.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC---CCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLG---YRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G---~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||+|||+||+.++++| . +|+|+||....||.+
T Consensus 4 ~~~DVlVVG~G~AGl~AA~~Aa~~G~~~~-~V~lleK~~~~~~~s 47 (577)
T PRK06069 4 LKYDVVIVGSGLAGLRAAVAAAERSGGKL-SVAVVSKTQPMRSHS 47 (577)
T ss_pred eecCEEEECccHHHHHHHHHHHHhCCCCC-cEEEEEcccCCCCCc
Confidence 3579999999999999999999998 7 699999999888743
No 441
>PTZ00306 NADH-dependent fumarate reductase; Provisional
Probab=97.57 E-value=0.0002 Score=103.48 Aligned_cols=42 Identities=40% Similarity=0.571 Sum_probs=38.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.+.||+|||||.|||+||+..+++|. +|+|+||.+..||.+
T Consensus 407 t~~~DVvVVG~G~AGl~AAi~Aae~Ga-~VivlEK~~~~GG~s 448 (1167)
T PTZ00306 407 SLPARVIVVGGGLAGCSAAIEAASCGA-QVILLEKEAKLGGNS 448 (1167)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEEccCCCCCch
Confidence 456899999999999999999999998 699999999999954
No 442
>TIGR01812 sdhA_frdA_Gneg succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup. This model represents the succinate dehydrogenase flavoprotein subunit as found in Gram-negative bacteria, mitochondria, and some Archaea. Mitochondrial forms interact with ubiquinone and are designated EC 1.3.5.1, but can be degraded to 1.3.99.1. Some isozymes in E. coli and other species run primarily in the opposite direction and are designated fumarate reductase.
Probab=97.57 E-value=0.00047 Score=93.36 Aligned_cols=38 Identities=32% Similarity=0.425 Sum_probs=34.8
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
||+|||||+|||+||+.++++|. +|+|+||....||.+
T Consensus 1 DVlVVG~G~AGl~AA~~aae~G~-~V~lleK~~~~~g~s 38 (566)
T TIGR01812 1 DVVIVGAGLAGLRAAVEAAKAGL-NTAVISKVYPTRSHT 38 (566)
T ss_pred CEEEECccHHHHHHHHHHHHCCC-cEEEEeccCCCCCcc
Confidence 79999999999999999999998 699999998877743
No 443
>PRK12779 putative bifunctional glutamate synthase subunit beta/2-polyprenylphenol hydroxylase; Provisional
Probab=97.57 E-value=6.8e-05 Score=104.96 Aligned_cols=43 Identities=47% Similarity=0.842 Sum_probs=40.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
++.++|+|||||+|||+||++|+++|+ +|+|||+.+++||.++
T Consensus 304 ~~gkkVaVIGsGPAGLsaA~~Lar~G~-~VtVfE~~~~~GG~l~ 346 (944)
T PRK12779 304 AVKPPIAVVGSGPSGLINAYLLAVEGF-PVTVFEAFHDLGGVLR 346 (944)
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEeeCCCCCceEE
Confidence 457899999999999999999999999 6999999999999875
No 444
>TIGR03315 Se_ygfK putative selenate reductase, YgfK subunit. Members of this protein family are YgfK, predicted to be one subunit of a three-subunit, molybdopterin-containing selenate reductase. This enzyme is found, typically, in genomic regions associated with xanthine dehydrogenase homologs predicted to belong to the selenium-dependent molybdenum hydroxylases (SDMH). Therefore, the selenate reductase is suggested to play a role in furnishing selenide for SelD, the selenophosphate synthase.
Probab=97.54 E-value=8.7e-05 Score=102.56 Aligned_cols=43 Identities=37% Similarity=0.729 Sum_probs=39.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
+.+||+|||||+|||+||++|+++|+ +|+|+|+++.+||.++.
T Consensus 536 ~~kkVaIIGGGPAGLSAA~~LAr~G~-~VTV~Ek~~~lGG~l~~ 578 (1012)
T TIGR03315 536 SAHKVAVIGAGPAGLSAGYFLARAGH-PVTVFEKKEKPGGVVKN 578 (1012)
T ss_pred CCCcEEEECCCHHHHHHHHHHHHCCC-eEEEEecccccCceeee
Confidence 35799999999999999999999999 69999999999997643
No 445
>PRK07395 L-aspartate oxidase; Provisional
Probab=97.54 E-value=0.00062 Score=90.92 Aligned_cols=40 Identities=28% Similarity=0.360 Sum_probs=35.2
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
..+.||+|||+|.|||+||+.++ +|. +|+|+||.+..||.
T Consensus 7 ~~e~DVlVVG~G~AGl~AAi~A~-~G~-~V~lieK~~~~gg~ 46 (553)
T PRK07395 7 PSQFDVLVVGSGAAGLYAALCLP-SHL-RVGLITKDTLKTSA 46 (553)
T ss_pred cccCCEEEECccHHHHHHHHHhh-cCC-CEEEEEccCCCCCc
Confidence 34679999999999999999996 488 69999999988884
No 446
>TIGR03140 AhpF alkyl hydroperoxide reductase, F subunit. This enzyme is the partner of the peroxiredoxin (alkyl hydroperoxide reductase) AhpC which contains the peroxide-reactive cysteine. AhpF contains the reductant (NAD(P)H) binding domain (pfam00070) and presumably acts to resolve the disulfide which forms after oxidation of the active site cysteine in AphC. This proteins contains two paired conserved cysteine motifs, CxxCP and CxHCDGP.
Probab=97.53 E-value=0.00038 Score=92.82 Aligned_cols=40 Identities=28% Similarity=0.519 Sum_probs=35.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
...+||+|||||++||+||.+|++.|+ +|+|+|. ++||.+
T Consensus 210 ~~~~dVvIIGgGpAGl~AA~~la~~G~-~v~li~~--~~GG~~ 249 (515)
T TIGR03140 210 LDPYDVLVVGGGPAGAAAAIYAARKGL-RTAMVAE--RIGGQV 249 (515)
T ss_pred cCCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEec--CCCCcc
Confidence 345899999999999999999999999 6999984 688854
No 447
>PRK06996 hypothetical protein; Provisional
Probab=97.51 E-value=0.0002 Score=92.79 Aligned_cols=37 Identities=32% Similarity=0.457 Sum_probs=31.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCC---CceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGY---RNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~---~~VtVlEk~~r 56 (2280)
+.+||+|||||++|+++|+.|++.|. .+|+|+|+.+.
T Consensus 10 ~~~dv~IvGgGpaG~~~A~~L~~~g~~~g~~v~l~e~~~~ 49 (398)
T PRK06996 10 PDFDIAIVGAGPVGLALAGWLARRSATRALSIALIDAREP 49 (398)
T ss_pred CCCCEEEECcCHHHHHHHHHHhcCCCcCCceEEEecCCCC
Confidence 35799999999999999999999873 15999999754
No 448
>PTZ00139 Succinate dehydrogenase [ubiquinone] flavoprotein subunit; Provisional
Probab=97.51 E-value=0.00095 Score=90.38 Aligned_cols=41 Identities=27% Similarity=0.434 Sum_probs=36.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||.|||+||+.++++|. +|+|+||....||.+
T Consensus 28 ~~~DVlVIG~G~AGl~AAi~Aa~~G~-~V~lveK~~~~~g~t 68 (617)
T PTZ00139 28 HTYDAVVVGAGGAGLRAALGLVELGY-KTACISKLFPTRSHT 68 (617)
T ss_pred cccCEEEECccHHHHHHHHHHHHcCC-cEEEEeccCCCCCCc
Confidence 35799999999999999999999998 699999998877743
No 449
>COG1148 HdrA Heterodisulfide reductase, subunit A and related polyferredoxins [Energy production and conversion]
Probab=97.50 E-value=7.8e-05 Score=90.38 Aligned_cols=43 Identities=35% Similarity=0.697 Sum_probs=39.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
..+++.|||||+|||+||..|++.|+ +|.++||+..+|||+..
T Consensus 123 v~~svLVIGGGvAGitAAl~La~~G~-~v~LVEKepsiGGrmak 165 (622)
T COG1148 123 VSKSVLVIGGGVAGITAALELADMGF-KVYLVEKEPSIGGRMAK 165 (622)
T ss_pred hccceEEEcCcHHHHHHHHHHHHcCC-eEEEEecCCcccccHHh
Confidence 35789999999999999999999999 59999999999998654
No 450
>PRK05192 tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA; Validated
Probab=97.49 E-value=0.00045 Score=90.42 Aligned_cols=40 Identities=35% Similarity=0.578 Sum_probs=36.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecC-CCCCc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY-HTVGG 59 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~-~riGG 59 (2280)
+.++||+|||||+||+.||+.+++.|. +|+++|++ +.+|+
T Consensus 2 ~~~yDVIVVGGGpAG~eAA~~aAR~G~-kV~LiE~~~d~iG~ 42 (618)
T PRK05192 2 PEEYDVIVVGGGHAGCEAALAAARMGA-KTLLLTHNLDTIGQ 42 (618)
T ss_pred CccceEEEECchHHHHHHHHHHHHcCC-cEEEEecccccccc
Confidence 456899999999999999999999999 59999998 57776
No 451
>PRK08958 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.49 E-value=0.0011 Score=89.44 Aligned_cols=39 Identities=21% Similarity=0.376 Sum_probs=35.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+.||+|||||.|||+||+.++++|. +|+|+||....||.
T Consensus 7 ~~DVlVVG~G~AGl~AAi~Aa~~G~-~V~lleK~~~~~g~ 45 (588)
T PRK08958 7 EFDAVVIGAGGAGMRAALQISQSGQ-SCALLSKVFPTRSH 45 (588)
T ss_pred ccCEEEECccHHHHHHHHHHHHcCC-cEEEEEccCCCCCc
Confidence 5799999999999999999999998 69999999888774
No 452
>TIGR00551 nadB L-aspartate oxidase. L-aspartate oxidase is the B protein, NadB, of the quinolinate synthetase complex. Quinolinate synthetase makes a precursor of the pyridine nucleotide portion of NAD. This model identifies proteins that cluster as L-aspartate oxidase (a flavoprotein difficult to separate from the set of closely related flavoprotein subunits of succinate dehydrogenase and fumarate reductase) by both UPGMA and neighbor-joining trees. The most distant protein accepted as an L-aspartate oxidase (NadB), that from Pyrococcus horikoshii, not only clusters with other NadB but is just one gene away from NadA.
Probab=97.48 E-value=0.001 Score=88.15 Aligned_cols=38 Identities=39% Similarity=0.599 Sum_probs=34.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+.||+|||||+|||+||+.+++.| . |+|+||.+..||.
T Consensus 2 ~~DVlVVG~G~AGl~AA~~aa~~G-~-V~lleK~~~~~g~ 39 (488)
T TIGR00551 2 SCDVVVIGSGAAGLSAALALADQG-R-VIVLSKAPVTEGN 39 (488)
T ss_pred CccEEEECccHHHHHHHHHHHhCC-C-EEEEEccCCCCCc
Confidence 369999999999999999999999 4 9999999888774
No 453
>PRK07803 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.48 E-value=0.00051 Score=93.29 Aligned_cols=38 Identities=21% Similarity=0.288 Sum_probs=35.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||+|||+||+.++++|. +|+|+||....||
T Consensus 8 ~~DVvVIG~G~AGl~AAl~Aae~G~-~V~lieK~~~~~g 45 (626)
T PRK07803 8 SYDVVVIGAGGAGLRAAIEARERGL-RVAVVCKSLFGKA 45 (626)
T ss_pred eecEEEECcCHHHHHHHHHHHHCCC-CEEEEeccCCCCC
Confidence 5799999999999999999999998 6999999987666
No 454
>PRK07843 3-ketosteroid-delta-1-dehydrogenase; Reviewed
Probab=97.47 E-value=0.001 Score=89.42 Aligned_cols=40 Identities=28% Similarity=0.469 Sum_probs=37.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.||+|||+|.+|++||+.++++|. +|+||||...+||.+
T Consensus 7 ~~DvvVvG~G~aG~~aA~~aa~~G~-~v~llEk~~~~gG~~ 46 (557)
T PRK07843 7 EYDVVVVGSGAAGMVAALTAAHRGL-STVVVEKAPHYGGST 46 (557)
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCCCCccc
Confidence 5799999999999999999999998 699999999998854
No 455
>PRK06263 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.46 E-value=0.0015 Score=87.73 Aligned_cols=39 Identities=28% Similarity=0.353 Sum_probs=33.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC-CCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT-VGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r-iGG~ 60 (2280)
.+.||+|||||.|||+||+.+ +.|. +|+|+||... .||.
T Consensus 6 ~~~DVlVVG~G~AGl~AAi~A-~~G~-~VilleK~~~~~gG~ 45 (543)
T PRK06263 6 MITDVLIIGSGGAGARAAIEA-ERGK-NVVIVSKGLFGKSGC 45 (543)
T ss_pred eccCEEEECccHHHHHHHHHH-hcCC-CEEEEEccCCCCCcc
Confidence 357999999999999999999 8998 6999999865 4554
No 456
>PF13454 NAD_binding_9: FAD-NAD(P)-binding
Probab=97.46 E-value=0.00074 Score=74.73 Aligned_cols=35 Identities=29% Similarity=0.552 Sum_probs=28.5
Q ss_pred EeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcC
Q 037878 204 HCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISG 242 (2280)
Q Consensus 204 ~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~ 242 (2280)
+.+.+|++|++.++++ .+.+.+| ..+.||+||+|+
T Consensus 119 ~~~~~V~~i~~~~~~~--~v~~~~g--~~~~~d~VvLa~ 153 (156)
T PF13454_consen 119 HVRAEVVDIRRDDDGY--RVVTADG--QSIRADAVVLAT 153 (156)
T ss_pred EEeeEEEEEEEcCCcE--EEEECCC--CEEEeCEEEECC
Confidence 4577999999998876 5566778 578999999983
No 457
>KOG2853 consensus Possible oxidoreductase [General function prediction only]
Probab=97.46 E-value=0.0031 Score=73.33 Aligned_cols=47 Identities=40% Similarity=0.718 Sum_probs=39.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC----CCCceEEEecCCC---------CCceEEEEeec
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL----GYRNVTLLEKYHT---------VGGMCESVEIE 67 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~----G~~~VtVlEk~~r---------iGG~~~t~~~~ 67 (2280)
.+.||+|||||.+|+|.|+.|+++ |+ +|+|+|+++. +||-|+.+...
T Consensus 85 ~~~dVvIIGGG~~GsS~AfWLKer~rd~gl-~VvVVErddtytqssT~lSvGGi~QQFSlp 144 (509)
T KOG2853|consen 85 YHCDVVIIGGGGSGSSTAFWLKERARDEGL-NVVVVERDDTYTQSSTMLSVGGICQQFSLP 144 (509)
T ss_pred cccCEEEECCCccchhhHHHHHHHhhcCCc-eEEEEeccCcccccceeeeecceeeecccc
Confidence 467999999999999999999765 67 6999999874 77877776543
No 458
>PRK12831 putative oxidoreductase; Provisional
Probab=97.45 E-value=0.00014 Score=95.18 Aligned_cols=44 Identities=39% Similarity=0.745 Sum_probs=40.2
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
..+.+||+|||||++||+||++|++.|+ +|+|+|+++.+||.+.
T Consensus 137 ~~~~~~V~IIG~GpAGl~aA~~l~~~G~-~V~v~e~~~~~GG~l~ 180 (464)
T PRK12831 137 EKKGKKVAVIGSGPAGLTCAGDLAKMGY-DVTIFEALHEPGGVLV 180 (464)
T ss_pred CCCCCEEEEECcCHHHHHHHHHHHhCCC-eEEEEecCCCCCCeee
Confidence 3456899999999999999999999999 6999999999999875
No 459
>PRK08071 L-aspartate oxidase; Provisional
Probab=97.45 E-value=0.0004 Score=92.23 Aligned_cols=39 Identities=26% Similarity=0.404 Sum_probs=34.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
..||+|||+|.|||+||..+++ |. +|+|+||....||.+
T Consensus 3 ~~DVlVVG~G~AGl~AAl~a~~-g~-~V~lveK~~~~~g~s 41 (510)
T PRK08071 3 SADVIIIGSGIAALTVAKELCH-EY-NVIIITKKTKRNSNS 41 (510)
T ss_pred ccCEEEECccHHHHHHHHHhhc-CC-CEEEEeccCCCCCCc
Confidence 5799999999999999999976 87 699999999888843
No 460
>PRK06115 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.44 E-value=0.00011 Score=96.76 Aligned_cols=43 Identities=35% Similarity=0.668 Sum_probs=39.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
+++||+|||||++|++||.+++++|. +|+|+|+++.+||.|-.
T Consensus 2 ~~~DvvVIG~GpaG~~AA~~aa~~G~-~V~liE~~~~~GG~c~~ 44 (466)
T PRK06115 2 ASYDVVIIGGGPGGYNAAIRAGQLGL-KVACVEGRSTLGGTCLN 44 (466)
T ss_pred CcccEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCceeeeecc
Confidence 35899999999999999999999998 69999998899997644
No 461
>PF06100 Strep_67kDa_ant: Streptococcal 67 kDa myosin-cross-reactive antigen like family ; InterPro: IPR010354 Members of this family are thought to have structural features in common with the beta chain of the class II antigens, as well as myosin, and may play an important role in the pathogenesis [].
Probab=97.44 E-value=0.0014 Score=82.23 Aligned_cols=45 Identities=29% Similarity=0.420 Sum_probs=38.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCC---CceEEEecCCCCCceEEEEe
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGY---RNVTLLEKYHTVGGMCESVE 65 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~---~~VtVlEk~~riGG~~~t~~ 65 (2280)
++++=|||+|+|+|+||.+|-+.|. ++|+|||+.+..||-+....
T Consensus 2 ~~~AyivGsGiAsLAAAvfLIrDa~~pg~nIhIlE~~~~~GGsldg~g 49 (500)
T PF06100_consen 2 NKKAYIVGSGIASLAAAVFLIRDAKMPGENIHILEELDVPGGSLDGAG 49 (500)
T ss_pred CceEEEECCCHHHHHhhhhhhccCCCCccceEEEeCCCCCCCcccCCC
Confidence 5688999999999999999987753 37999999999999876654
No 462
>PRK07804 L-aspartate oxidase; Provisional
Probab=97.43 E-value=0.001 Score=89.07 Aligned_cols=41 Identities=27% Similarity=0.364 Sum_probs=37.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
..+.||+|||||+|||+||+.+++.|. +|+|+||....||.
T Consensus 14 ~~~~DVlVIG~G~AGl~AAi~aae~G~-~VilleK~~~~~g~ 54 (541)
T PRK07804 14 RDAADVVVVGSGVAGLTAALAARRAGR-RVLVVTKAALDDGS 54 (541)
T ss_pred ccccCEEEECccHHHHHHHHHHHHcCC-eEEEEEccCCCCCc
Confidence 346899999999999999999999998 69999999988773
No 463
>PLN02815 L-aspartate oxidase
Probab=97.43 E-value=0.00048 Score=92.30 Aligned_cols=45 Identities=22% Similarity=0.272 Sum_probs=38.8
Q ss_pred cCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 14 LHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 14 ~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+......+.||+|||+|.|||+||+.+++.| + |+|+||....||.
T Consensus 22 ~~~~~~~~~DVlVVG~G~AGl~AAl~Aae~G-~-VvlleK~~~~gg~ 66 (594)
T PLN02815 22 LDDESTKYFDFLVIGSGIAGLRYALEVAEYG-T-VAIITKDEPHESN 66 (594)
T ss_pred cccCcccccCEEEECccHHHHHHHHHHhhCC-C-EEEEECCCCCCCc
Confidence 4444455689999999999999999999999 5 9999999998884
No 464
>PRK05249 soluble pyridine nucleotide transhydrogenase; Provisional
Probab=97.43 E-value=0.00011 Score=97.06 Aligned_cols=43 Identities=37% Similarity=0.736 Sum_probs=39.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
.++||+|||||++|++||++|++.|. +|+|+|+++.+||.|..
T Consensus 4 ~~yDvvVIGaGpaG~~aA~~la~~G~-~v~liE~~~~~GG~~~~ 46 (461)
T PRK05249 4 YDYDLVVIGSGPAGEGAAMQAAKLGK-RVAVIERYRNVGGGCTH 46 (461)
T ss_pred ccccEEEECCCHHHHHHHHHHHhCCC-EEEEEeccccccccccc
Confidence 46899999999999999999999998 69999999999997643
No 465
>PLN02852 ferredoxin-NADP+ reductase
Probab=97.42 E-value=0.00017 Score=93.48 Aligned_cols=44 Identities=34% Similarity=0.483 Sum_probs=38.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHh--CCCCceEEEecCCCCCceEEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAK--LGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~--~G~~~VtVlEk~~riGG~~~t 63 (2280)
...++|+|||||+|||+||+.|++ .|+ +|+|||+.+.+||.++.
T Consensus 24 ~~~~~VaIVGaGPAGl~AA~~L~~~~~g~-~Vtv~E~~p~pgGlvr~ 69 (491)
T PLN02852 24 SEPLHVCVVGSGPAGFYTADKLLKAHDGA-RVDIIERLPTPFGLVRS 69 (491)
T ss_pred CCCCcEEEECccHHHHHHHHHHHhhCCCC-eEEEEecCCCCcceEee
Confidence 346789999999999999999987 788 69999999999996653
No 466
>cd05787 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon). eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B epsilon subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold, a central LbH domain containing 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal domain of unknown function that is present in eIF-4 gamma, eIF-5, and eIF-2B epsilon. The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.
Probab=97.42 E-value=0.00054 Score=66.16 Aligned_cols=17 Identities=24% Similarity=0.472 Sum_probs=12.9
Q ss_pred eEECCCCEeCCCCEEee
Q 037878 1337 VLIGDGAVISEGALIQS 1353 (2280)
Q Consensus 1337 ~~IG~~~~I~~~~~l~~ 1353 (2280)
..||++|.|++++.|.+
T Consensus 17 s~ig~~~~ig~~~~i~~ 33 (79)
T cd05787 17 SVIGRNCKIGKNVVIDN 33 (79)
T ss_pred cEECCCCEECCCCEEeC
Confidence 45888888888888753
No 467
>TIGR02485 CobZ_N-term precorrin 3B synthase CobZ. CobZ is essential for cobalamin biosynthesis (by knockout of the R. capsulatus gene ) and is complemented by the characterized precorrin 3B synthase CobG. The enzyme has been shown to contain flavin, heme and Fe-S cluster cofactors and is believed to require dioxygen as a substrate. This model identifies the N-terminal portion of the R. capsulatus gene which, in other species exists as a separate protein. The C-terminal portion is homologous to the 2-component signal transduction system protein CitB (TIGR02484).
Probab=97.42 E-value=0.00069 Score=88.65 Aligned_cols=35 Identities=37% Similarity=0.592 Sum_probs=31.0
Q ss_pred EECccHHHHHHHHHHHhCCCCceEEEecCCC--CCceE
Q 037878 26 IVGGGPSGLSTAYALAKLGYRNVTLLEKYHT--VGGMC 61 (2280)
Q Consensus 26 IIGaGisGLsAA~~La~~G~~~VtVlEk~~r--iGG~~ 61 (2280)
|||+|++||+||+.++++|. +|+|+||.+. .||..
T Consensus 1 VVG~G~AGl~AA~~Aa~~Ga-~V~vlEK~~~~~~Gg~s 37 (432)
T TIGR02485 1 VIGGGLAGLCAAIEARRAGA-SVLLLEAAPRARRGGNA 37 (432)
T ss_pred CCcccHHHHHHHHHHHhCCC-cEEEEeCCCCCcCCcCc
Confidence 79999999999999999998 6999999884 56643
No 468
>PRK06452 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.41 E-value=0.00042 Score=93.13 Aligned_cols=41 Identities=24% Similarity=0.481 Sum_probs=36.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||.|||+||+.++++|. +|+|+||....||.+
T Consensus 4 ~~~DVvVVG~G~AGl~AAl~Aae~G~-~V~lveK~~~~~g~s 44 (566)
T PRK06452 4 IEYDAVVIGGGLAGLMSAHEIASAGF-KVAVISKVFPTRSHS 44 (566)
T ss_pred ccCcEEEECccHHHHHHHHHHHHCCC-cEEEEEccCCCCCcc
Confidence 35799999999999999999999998 699999998877743
No 469
>KOG1461 consensus Translation initiation factor 2B, epsilon subunit (eIF-2Bepsilon/GCD6) [Translation, ribosomal structure and biogenesis]
Probab=97.41 E-value=0.00021 Score=89.54 Aligned_cols=68 Identities=24% Similarity=0.359 Sum_probs=56.1
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCC-----cEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEE
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDN-----SVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIY 1667 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~-----~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~ 1667 (2280)
..||.||.||++|.|.+. +....|+||+| |+|+.++.|..|+++.++|+||.+.+++++..+|.++..
T Consensus 351 SVIG~~c~IgsN~~I~~S------~iw~~v~Igdnc~I~~aii~d~v~i~~~~~l~~g~vl~~~VVv~~~~~l~~ns~~ 423 (673)
T KOG1461|consen 351 SVIGANCRIGSNVRIKNS------FIWNNVTIGDNCRIDHAIICDDVKIGEGAILKPGSVLGFGVVVGRNFVLPKNSKV 423 (673)
T ss_pred ceecCCCEecCceEEeee------eeecCcEECCCceEeeeEeecCcEeCCCcccCCCcEEeeeeEeCCCccccccccc
Confidence 679999999999988433 34455677776 677888999999999999999999999999888988877
No 470
>PRK09077 L-aspartate oxidase; Provisional
Probab=97.41 E-value=0.0016 Score=87.07 Aligned_cols=40 Identities=33% Similarity=0.384 Sum_probs=35.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
..+.||+|||+|+|||+||+.+++. . +|+|+||....||.
T Consensus 6 ~~~~DVlVVG~G~AGl~AA~~aa~~-~-~VilveK~~~~~g~ 45 (536)
T PRK09077 6 EHQCDVLIIGSGAAGLSLALRLAEH-R-RVAVLSKGPLSEGS 45 (536)
T ss_pred cccCCEEEECchHHHHHHHHHHHHC-C-CEEEEeccCCCCCC
Confidence 4467999999999999999999986 6 69999999988884
No 471
>PRK07057 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.41 E-value=0.0021 Score=86.90 Aligned_cols=40 Identities=30% Similarity=0.464 Sum_probs=36.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.||+|||||.|||+||+.+++.|. +|+|+||....||.+
T Consensus 12 ~~DVlVIG~G~AGl~AAi~Aa~~G~-~V~vleK~~~~~g~t 51 (591)
T PRK07057 12 KFDVVIVGAGGSGMRASLQLARAGL-SVAVLSKVFPTRSHT 51 (591)
T ss_pred cCCEEEECccHHHHHHHHHHHHCCC-cEEEEeccCCCCCCc
Confidence 5799999999999999999999998 699999988877743
No 472
>PLN02985 squalene monooxygenase
Probab=97.41 E-value=0.00061 Score=90.17 Aligned_cols=36 Identities=42% Similarity=0.497 Sum_probs=32.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.+.||+|||||++|+++|+.|+++|+ +|+|+||...
T Consensus 42 ~~~DViIVGAG~aGlalA~aLa~~G~-~V~vlEr~~~ 77 (514)
T PLN02985 42 GATDVIIVGAGVGGSALAYALAKDGR-RVHVIERDLR 77 (514)
T ss_pred CCceEEEECCCHHHHHHHHHHHHcCC-eEEEEECcCC
Confidence 45799999999999999999999998 6999999753
No 473
>PLN00128 Succinate dehydrogenase [ubiquinone] flavoprotein subunit
Probab=97.40 E-value=0.0015 Score=88.33 Aligned_cols=39 Identities=26% Similarity=0.429 Sum_probs=35.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+.||+|||||+|||+||+.++++|. +|+|+||....||.
T Consensus 50 ~~DVlVIG~G~AGl~AAl~Aae~G~-~VilveK~~~~~g~ 88 (635)
T PLN00128 50 TYDAVVVGAGGAGLRAAIGLSEHGF-NTACITKLFPTRSH 88 (635)
T ss_pred ecCEEEECccHHHHHHHHHHHhcCC-cEEEEEcCCCCCCc
Confidence 4699999999999999999999998 69999999887773
No 474
>PRK09853 putative selenate reductase subunit YgfK; Provisional
Probab=97.40 E-value=0.00015 Score=99.68 Aligned_cols=44 Identities=34% Similarity=0.724 Sum_probs=39.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
.+.++|+|||||+|||+||++|+++|+ +|+|+|+++.+||.++.
T Consensus 537 ~tgKkVaIIGgGPAGLsAA~~Lar~G~-~VtV~Ek~~~~GG~lr~ 580 (1019)
T PRK09853 537 GSRKKVAVIGAGPAGLAAAYFLARAGH-PVTVFEREENAGGVVKN 580 (1019)
T ss_pred CCCCcEEEECCCHHHHHHHHHHHHcCC-eEEEEecccccCcceee
Confidence 356899999999999999999999999 69999999999996643
No 475
>PRK09078 sdhA succinate dehydrogenase flavoprotein subunit; Reviewed
Probab=97.39 E-value=0.00084 Score=90.79 Aligned_cols=39 Identities=21% Similarity=0.384 Sum_probs=35.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+.||+|||||+|||+||+.+++.|. +|+|+||....||.
T Consensus 12 ~~DVvVIG~G~AGl~AAl~Aa~~G~-~V~lveK~~~~~g~ 50 (598)
T PRK09078 12 KYDVVVVGAGGAGLRATLGMAEAGL-KTACITKVFPTRSH 50 (598)
T ss_pred ccCEEEECccHHHHHHHHHHHHcCC-cEEEEEccCCCCcc
Confidence 5799999999999999999999998 69999998777663
No 476
>PRK05087 D-alanine--poly(phosphoribitol) ligase subunit 2; Validated
Probab=97.38 E-value=0.00042 Score=65.82 Aligned_cols=72 Identities=22% Similarity=0.264 Sum_probs=64.6
Q ss_pred HHHHHHHHHHHHhCCCCccccCCCChhhccc-chHHHHHHHHHHHHHhCCccCcccccC--cccHHHHHHHHHhh
Q 037878 1082 IVEFLKGLVSEQTGIPITKVSATDSLVSYGI-DSIGVVRAAQKLSDFLGVPVGAVDIFT--ATCIADLASFSENL 1153 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGG-dSL~a~~l~~~l~~~~g~~l~~~di~~--~pti~~LA~~l~~~ 1153 (2280)
+++.++++..+.++.+...+..++++|+.|+ |||.++.++..+.++||++++..++-. ..|+..|+++++++
T Consensus 3 i~~~I~~iL~~~~~~~~~~~~~d~~l~~~g~lDSl~~veli~~lE~~fgi~i~~~e~~~~~f~Tv~~i~~~v~~l 77 (78)
T PRK05087 3 FKEQVLDILEELTGEDIVSENMDEDLFEEGILDSMGTVELLVELENRFDIEVPVSEFDRDDWNTPNKIIAKVEEL 77 (78)
T ss_pred HHHHHHHHHHHHhCCChhccCCccchhhccCcchHHHHHHHHHHHHHhCCccChHhcCHHhhcCHHHHHHHHHHc
Confidence 5678899999999887667788999999996 999999999999999999999998888 89999999998764
No 477
>PF00996 GDI: GDP dissociation inhibitor; InterPro: IPR018203 Rab proteins constitute a family of small GTPases that serve a regulatory role in vesicular membrane traffic [, ]; C-terminal geranylgeranylation is crucial for their membrane association and function. This post-translational modification is catalysed by Rab geranylgeranyl transferase (Rab-GGTase), a multi-subunit enzyme that contains a catalytic heterodimer and an accessory component, termed Rab escort protein (REP)-1 []. REP-1 presents newly- synthesised Rab proteins to the catalytic component, and forms a stable complex with the prenylated proteins following the transfer reaction. The mechanism of REP-1-mediated membrane association of Rab5 is similar to that mediated by Rab GDP dissociation inhibitor (GDI). REP-1 and Rab GDI also share other functional properties, including the ability to inhibit the release of GDP and to remove Rab proteins from membranes. The crystal structure of the bovine alpha-isoform of Rab GDI has been determined to a resolution of 1.81A []. The protein is composed of two main structural units: a large complex multi-sheet domain I, and a smaller alpha-helical domain II. The structural organisation of domain I is closely related to FAD-containing monooxygenases and oxidases []. Conserved regions common to GDI and the choroideraemia gene product, which delivers Rab to catalytic subunits of Rab geranylgeranyltransferase II, are clustered on one face of the domain []. The two most conserved regions form a compact structure at the apex of the molecule; site-directed mutagenesis has shown these regions to play a critical role in the binding of Rab proteins [].; PDB: 1VG9_C 1VG0_A 1LTX_R 3P1W_A 3CPH_H 3CPJ_G 3CPI_H 1UKV_G 2BCG_G 1GND_A ....
Probab=97.38 E-value=0.0017 Score=82.33 Aligned_cols=49 Identities=22% Similarity=0.323 Sum_probs=37.5
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeec
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIE 67 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~ 67 (2280)
|+.+.||+|+|-|+.-.-.|-.|++.|. +|+.+|+++.-||...|..++
T Consensus 1 m~~~yDviI~GTGl~esila~als~~Gk-kVLhiD~n~yYGg~~asl~l~ 49 (438)
T PF00996_consen 1 MDEEYDVIILGTGLTESILAAALSRSGK-KVLHIDRNDYYGGEWASLNLD 49 (438)
T ss_dssp --SBESEEEE--SHHHHHHHHHHHHTT---EEEE-SSSSSCGGG-EE-HH
T ss_pred CCccceEEEECCCcHHHHHHHHHHhcCC-EEEecCCCCCcCCchhcccHH
Confidence 5678899999999999999999999998 699999999999999998744
No 478
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=97.37 E-value=0.00058 Score=69.04 Aligned_cols=56 Identities=20% Similarity=0.186 Sum_probs=30.3
Q ss_pred eEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEEC---CCCEECCCCEECCCCEECcCCccCCCCcc
Q 037878 1337 VLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVG---PYAVIQKGSVIGEEAEVAPLQKSEGGKPI 1404 (2280)
Q Consensus 1337 ~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG---~~~~i~pg~~ig~~a~ig~~s~v~~~~~~ 1404 (2280)
+.||++|.|++++.|.+ ++.||++|.|| .+++|+++++|++++.|+ .+.|.++..+
T Consensus 30 v~IG~~~~Ig~~~~I~~-----------~v~IG~~~~Ig~~i~~svi~~~~~i~~~~~lg-~siIg~~v~i 88 (101)
T cd05635 30 VYIGPGSRVKMGARIYG-----------NTTIGPTCKIGGEVEDSIIEGYSNKQHDGFLG-HSYLGSWCNL 88 (101)
T ss_pred CEECCCCEECCCCEEeC-----------cCEECCCCEECCEECccEEcCCCEecCcCEEe-eeEECCCCEE
Confidence 45666666666655542 33466666666 455555555555555554 4444444444
No 479
>PRK07251 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=97.35 E-value=0.00017 Score=94.53 Aligned_cols=43 Identities=30% Similarity=0.492 Sum_probs=38.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC-CCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT-VGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r-iGG~~~t 63 (2280)
+++||+|||||++|++||.+|++.|+ +|+|+||++. +||.|-.
T Consensus 2 ~~~dvvVIG~GpaG~~aA~~l~~~g~-~V~liE~~~~~~GG~c~~ 45 (438)
T PRK07251 2 LTYDLIVIGFGKAGKTLAAKLASAGK-KVALVEESKAMYGGTCIN 45 (438)
T ss_pred CccCEEEECCCHHHHHHHHHHHhCCC-EEEEEecCCcccceeeec
Confidence 46899999999999999999999998 6999999875 6997643
No 480
>TIGR01176 fum_red_Fp fumarate reductase, flavoprotein subunit. The terms succinate dehydrogenase and fumarate reductase may be used interchangeably in certain systems. However, a number of species have distinct complexes, with the fumarate reductase active under anaerobic conditions. This model represents the fumarate reductase flavoprotein subunit from several such species in which a distinct succinate dehydrogenase is also found. Not all bona fide fumarate reductases will be found by this model.
Probab=97.35 E-value=0.0016 Score=87.55 Aligned_cols=40 Identities=28% Similarity=0.429 Sum_probs=35.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG~~ 61 (2280)
+.||+|||||+|||+||+.++++ |. +|+|+||....||.+
T Consensus 3 ~~DVlVIG~G~AGl~AAl~aa~~g~g~-~V~lveK~~~~~~~s 44 (580)
T TIGR01176 3 QHDIAVIGAGGAGLRAAIAAAEANPHL-DVALISKVYPMRSHT 44 (580)
T ss_pred ceeEEEECccHHHHHHHHHHHHhCCCC-cEEEEEccCCCCCCc
Confidence 57999999999999999999987 56 699999999888844
No 481
>cd05787 LbH_eIF2B_epsilon eIF-2B epsilon subunit, central Left-handed parallel beta-Helix (LbH) domain: eIF-2B is a eukaryotic translation initiator, a guanine nucleotide exchange factor (GEF) composed of five different subunits (alpha, beta, gamma, delta and epsilon). eIF2B is important for regenerating GTP-bound eIF2 during the initiation process. This event is obligatory for eIF2 to bind initiator methionyl-tRNA, forming the ternary initiation complex. The eIF-2B epsilon subunit contains an N-terminal domain that resembles a dinucleotide-binding Rossmann fold, a central LbH domain containing 4 turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X), and a C-terminal domain of unknown function that is present in eIF-4 gamma, eIF-5, and eIF-2B epsilon. The epsilon and gamma subunits form the catalytic subcomplex of eIF-2B, which binds eIF2 and catalyzes guanine nucleotide exchange.
Probab=97.35 E-value=0.0006 Score=65.84 Aligned_cols=72 Identities=18% Similarity=0.206 Sum_probs=28.4
Q ss_pred CEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEE
Q 037878 1318 AKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEV 1392 (2280)
Q Consensus 1318 a~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~i 1392 (2280)
++|++++.|....+ .+.+.||++|.|. ++.+..+..-+...++....|++++.||.++.|.+|++|++++.|
T Consensus 6 ~~I~~~~~i~~s~i--g~~~~ig~~~~i~-~s~i~~~~~i~~~~~i~~~~i~~~~~i~~~~~i~~~~~v~~~~~i 77 (79)
T cd05787 6 TSIGEGTTIKNSVI--GRNCKIGKNVVID-NSYIWDDVTIEDGCTIHHSIVADGAVIGKGCTIPPGSLISFGVVI 77 (79)
T ss_pred CEECCCCEEeccEE--CCCCEECCCCEEe-CcEEeCCCEECCCCEEeCcEEcCCCEECCCCEECCCCEEeCCcEe
Confidence 44455554432111 2344455555554 344433332222222233334444444444444444444444433
No 482
>cd05635 LbH_unknown Uncharacterized proteins, Left-handed parallel beta-Helix (LbH) domain: Members in this group are uncharacterized bacterial proteins containing a LbH domain with multiple turns, each containing three imperfect tandem repeats of a hexapeptide repeat motif (X-[STAV]-X-[LIV]-[GAED]-X). Proteins containing hexapeptide repeats are often enzymes showing acyltransferase activity.
Probab=97.35 E-value=0.00066 Score=68.61 Aligned_cols=71 Identities=24% Similarity=0.279 Sum_probs=39.6
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEc---cCCeeCCCcEeCCCcEEc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIG---SQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG---~~~~v~~g~~ig~~~~vg 1650 (2280)
+.||+++.|+..+.+ ...+.||+++.|++++.|. +.+.||++|.|| .++++.++++|++++.|+
T Consensus 12 v~ig~~~~I~~~~~i--~g~v~IG~~~~Ig~~~~I~-----------~~v~IG~~~~Ig~~i~~svi~~~~~i~~~~~lg 78 (101)
T cd05635 12 IYIGKDAVIEPFAVI--EGPVYIGPGSRVKMGARIY-----------GNTTIGPTCKIGGEVEDSIIEGYSNKQHDGFLG 78 (101)
T ss_pred EEECCCCEECCCCEE--eCCCEECCCCEECCCCEEe-----------CcCEECCCCEECCEECccEEcCCCEecCcCEEe
Confidence 456666666654322 2236677777777777664 345566666665 455555555555555554
Q ss_pred cCccccCC
Q 037878 1651 ALSVAPMH 1658 (2280)
Q Consensus 1651 ~~s~v~~~ 1658 (2280)
.|.|-.+
T Consensus 79 -~siIg~~ 85 (101)
T cd05635 79 -HSYLGSW 85 (101)
T ss_pred -eeEECCC
Confidence 4444333
No 483
>COG1208 GCD1 Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) [Cell envelope biogenesis, outer membrane / Translation, ribosomal structure and biogenesis]
Probab=97.34 E-value=0.00081 Score=84.65 Aligned_cols=39 Identities=26% Similarity=0.347 Sum_probs=34.0
Q ss_pred ceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc
Q 037878 1360 VLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS 1398 (2280)
Q Consensus 1360 ~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v 1398 (2280)
....+|+.||++|.||.++.|.|+++||+||.||+++.+
T Consensus 256 ~~i~gp~~ig~~~~i~~~~~i~~~~~ig~~~~I~~~~~i 294 (358)
T COG1208 256 AYIIGPVVIGPGAKIGPGALIGPYTVIGEGVTIGNGVEI 294 (358)
T ss_pred ceEeCCEEECCCCEECCCCEECCCcEECCCCEECCCcEE
Confidence 445688999999999999999999999999999997543
No 484
>PF01134 GIDA: Glucose inhibited division protein A; InterPro: IPR002218 GidA is a tRNA modification enzyme found in bacteria and mitochondria. Though its precise molecular function of these proteins is not known, it is involved in the 5-carboxymethylaminomethyl modification of the wobble uridine base in some tRNAs [, ]. Sequence variations in the human mitochondrial protein may influence the severity of aminoglycoside-induced deafness []. This entry is found in GidA and related proteins, such as the methylenetetrahydrofolate--tRNA-(uracil-5-)-methyltransferase enzyme TrmFO.; GO: 0050660 flavin adenine dinucleotide binding, 0008033 tRNA processing; PDB: 3CES_C 3CP2_A 3G05_A 2CUL_A 3CP8_A 2ZXI_B 2ZXH_A 3G5S_A 3G5R_A 3G5Q_A.
Probab=97.34 E-value=0.00043 Score=85.97 Aligned_cols=36 Identities=36% Similarity=0.623 Sum_probs=29.4
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEE-ecCCCCCc
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLL-EKYHTVGG 59 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVl-Ek~~riGG 59 (2280)
||+|||||.||..||+.+++.|. +|+++ ++.+.+|.
T Consensus 1 DViVVGgG~AG~eAA~aaAr~G~-~V~Lit~~~d~i~~ 37 (392)
T PF01134_consen 1 DVIVVGGGHAGCEAALAAARMGA-KVLLITHNTDTIGE 37 (392)
T ss_dssp EEEEESSSHHHHHHHHHHHHTT---EEEEES-GGGTT-
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-CEEEEeeccccccc
Confidence 89999999999999999999999 59999 66666665
No 485
>PLN02661 Putative thiazole synthesis
Probab=97.33 E-value=0.0002 Score=87.42 Aligned_cols=51 Identities=31% Similarity=0.491 Sum_probs=40.9
Q ss_pred cccccccCCCCCCCCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCCCCCceE
Q 037878 8 DDQFCKLHPCLPVNTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 8 ~~~~~~~~~~~~~~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~riGG~~ 61 (2280)
++.|.++... .+.||+|||||++||+||++|++. |. +|+|+||+..+||.+
T Consensus 81 ~~~~~~l~~~--~~~DVlIVGaG~AGl~AA~~La~~~g~-kV~viEk~~~~GGG~ 132 (357)
T PLN02661 81 RRYMTDMITY--ADTDVVIVGAGSAGLSCAYELSKNPNV-KVAIIEQSVSPGGGA 132 (357)
T ss_pred HhHhhhhhhc--ccCCEEEECCHHHHHHHHHHHHHcCCC-eEEEEecCcccccce
Confidence 3345555433 357999999999999999999986 88 699999999998844
No 486
>PRK07639 acyl carrier protein; Provisional
Probab=97.33 E-value=0.00073 Score=65.79 Aligned_cols=76 Identities=16% Similarity=0.141 Sum_probs=66.8
Q ss_pred hhHHHHHHHHHHHHHhCCCC-ccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccc--cCcccHHHHHHHHHhhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPI-TKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDI--FTATCIADLASFSENLV 1154 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~-~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di--~~~pti~~LA~~l~~~~ 1154 (2280)
.+++.+.++++.++.++.+. +++..+.+|+ +||.||+.++++...+.++||+.++-.++ -.--|++++++++.+..
T Consensus 3 ~~ei~~~i~~il~e~l~~~~~~~i~~d~~l~edL~lDSld~velv~~lE~~fgi~i~d~~~~~~~~~Tv~~l~~~i~~~~ 82 (86)
T PRK07639 3 REALKNAVLKIMEEKLELKNVTHLEETMRLNEDLYIDSVMMLQLIVYIEMDVKLCVPEDEVDPKAFLTVGSLLDFMEELQ 82 (86)
T ss_pred HHHHHHHHHHHHHHHhCCCccccCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHccHHHhCCHHHHHHHHHHhh
Confidence 45677899999999999975 6899999998 59999999999999999999999998876 46789999999998743
No 487
>PRK09231 fumarate reductase flavoprotein subunit; Validated
Probab=97.33 E-value=0.00073 Score=91.07 Aligned_cols=41 Identities=24% Similarity=0.425 Sum_probs=35.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC--CCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLG--YRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G--~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||+|||+||+.+++.| . +|+|+||....||.+
T Consensus 3 ~~~DVlVVG~G~AGl~AAi~Aa~~g~g~-~V~lleK~~~~~g~s 45 (582)
T PRK09231 3 FQADLAIIGAGGAGLRAAIAAAEANPNL-KIALISKVYPMRSHT 45 (582)
T ss_pred eeeeEEEECccHHHHHHHHHHHHhCCCC-cEEEEEccCCCCCCh
Confidence 3579999999999999999999874 6 699999998888743
No 488
>PRK08172 putative acyl carrier protein IacP; Validated
Probab=97.32 E-value=0.00046 Score=66.40 Aligned_cols=74 Identities=18% Similarity=0.274 Sum_probs=69.1
Q ss_pred HHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1081 DIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1081 ~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
+..+.+.++.++.|+++++.|..+.+|. +||-|||..+.++..+.+.||+.++..++.+-.|++++..++.+..
T Consensus 4 ~i~~~v~~iiae~l~v~~~~i~~d~~l~~dL~~DSld~v~lv~~lEe~F~I~i~~~d~~~i~Tv~di~~~v~~~~ 78 (82)
T PRK08172 4 DIEARVKKVITSCIAVDVDSINGQTHLVEDLYADSLDLIDIVFGLSEEFDISCNENDLPDMTTFADICRVVKKSL 78 (82)
T ss_pred cHHHHHHHHHHHHHCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHHH
Confidence 5678899999999999999999999995 8999999999999999999999999999999999999999998744
No 489
>PRK08010 pyridine nucleotide-disulfide oxidoreductase; Provisional
Probab=97.32 E-value=0.00022 Score=93.59 Aligned_cols=43 Identities=35% Similarity=0.555 Sum_probs=38.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC-CCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH-TVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~-riGG~~~t 63 (2280)
+++||+|||||++|++||++|+++|+ +|+|+|+.+ .+||.|..
T Consensus 2 ~~yDvvVIGgGpaGl~aA~~la~~g~-~V~lie~~~~~~GG~~~~ 45 (441)
T PRK08010 2 NKYQAVIIGFGKAGKTLAVTLAKAGW-RVALIEQSNAMYGGTCIN 45 (441)
T ss_pred CcCCEEEECCCHhHHHHHHHHHHCCC-eEEEEcCCCCccceeEee
Confidence 46899999999999999999999998 699999976 48997754
No 490
>PRK06467 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.31 E-value=0.00022 Score=94.07 Aligned_cols=44 Identities=36% Similarity=0.824 Sum_probs=39.7
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
|+.++||+|||||++|++||.+|++.|. +|+|+|+++.+||.|.
T Consensus 1 ~~~~~DvvVIG~GpaG~~aA~~aa~~G~-~V~lie~~~~~GG~c~ 44 (471)
T PRK06467 1 MEIKTQVVVLGAGPAGYSAAFRAADLGL-ETVCVERYSTLGGVCL 44 (471)
T ss_pred CCccceEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCccccccc
Confidence 4457899999999999999999999998 6999999889999663
No 491
>COG0236 AcpP Acyl carrier protein [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.30 E-value=0.00049 Score=66.41 Aligned_cols=74 Identities=24% Similarity=0.461 Sum_probs=67.9
Q ss_pred hHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1080 KDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1080 ~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
...+..++++..+.|+.++..+..+++|. ++|.|||.++.|...|.+.||+.++..++....|++++++++...
T Consensus 4 ~~~~~~i~~ii~e~l~~~~~~i~~~~~~~~dlg~DSld~veLi~~lE~~f~i~i~~e~~~~~~tv~~l~~~i~~~ 78 (80)
T COG0236 4 EAIEERVKDIIAEQLGVDEEEITTEASFVEDLGLDSLDLVELVMALEEEFGIEIPDEELENIKTVGDLVDYIEEL 78 (80)
T ss_pred HHHHHHHHHHHHHHhCCchhhcCcccccccccCccHHHHHHHHHHHHHHHCCcCCHHHHHHHHhHHHHHHHHHHh
Confidence 45678899999999999877888899998 599999999999999999999999999999999999999998763
No 492
>PRK06116 glutathione reductase; Validated
Probab=97.30 E-value=0.00018 Score=94.62 Aligned_cols=43 Identities=30% Similarity=0.601 Sum_probs=38.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
+.++||+|||||++|++||.+|+++|+ +|+|+|+. .+||.|..
T Consensus 2 ~~~~DvvVIG~GpaG~~aA~~~a~~G~-~V~liE~~-~~GG~c~n 44 (450)
T PRK06116 2 TKDYDLIVIGGGSGGIASANRAAMYGA-KVALIEAK-RLGGTCVN 44 (450)
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecc-chhhhhhc
Confidence 346899999999999999999999998 69999995 89996643
No 493
>PRK06854 adenylylsulfate reductase subunit alpha; Validated
Probab=97.28 E-value=0.0021 Score=87.00 Aligned_cols=38 Identities=29% Similarity=0.462 Sum_probs=34.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||+|||+||+.++++ |. +|+|+||.+..++
T Consensus 11 ~~DVlVIG~G~AGl~AAi~Aae~~~G~-~V~lieK~~~~~s 50 (608)
T PRK06854 11 DTDILIIGGGMAGCGAAFEAKEWAPDL-KVLIVEKANIKRS 50 (608)
T ss_pred EeCEEEECcCHHHHHHHHHHHHhCCCC-eEEEEECCCcCCC
Confidence 47999999999999999999998 98 6999999886544
No 494
>PRK06370 mercuric reductase; Validated
Probab=97.28 E-value=0.00023 Score=94.03 Aligned_cols=44 Identities=30% Similarity=0.464 Sum_probs=38.6
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
|+.++||+|||||++|++||.+|++.|+ +|+|+|+. .+||.|..
T Consensus 2 ~~~~~DvvVIG~GpaG~~aA~~aa~~G~-~v~lie~~-~~GG~c~~ 45 (463)
T PRK06370 2 PAQRYDAIVIGAGQAGPPLAARAAGLGM-KVALIERG-LLGGTCVN 45 (463)
T ss_pred CCccccEEEECCCHHHHHHHHHHHhCCC-eEEEEecC-ccCCceec
Confidence 5567899999999999999999999998 69999995 78886643
No 495
>PRK05329 anaerobic glycerol-3-phosphate dehydrogenase subunit B; Validated
Probab=97.27 E-value=0.0012 Score=84.29 Aligned_cols=34 Identities=35% Similarity=0.545 Sum_probs=31.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
++||+|||||++|++||+.|+++|. +|+|+|+..
T Consensus 2 ~~DviIIG~G~aGl~aA~~la~~g~-~v~vi~~~~ 35 (422)
T PRK05329 2 KFDVLVIGGGLAGLTAALAAAEAGK-RVALVAKGQ 35 (422)
T ss_pred CCCEEEECccHHHHHHHHHHHHCCC-cEEEEECCC
Confidence 5799999999999999999999998 699999863
No 496
>PTZ00188 adrenodoxin reductase; Provisional
Probab=97.27 E-value=0.00034 Score=88.83 Aligned_cols=43 Identities=28% Similarity=0.415 Sum_probs=37.6
Q ss_pred CCCeEEEECccHHHHHHHHHH-HhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYAL-AKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~L-a~~G~~~VtVlEk~~riGG~~~t 63 (2280)
..++|+|||||+|||+||.+| ++.|+ +|+||||.+.+||.++.
T Consensus 38 ~~krVAIVGaGPAGlyaA~~Ll~~~g~-~VtlfEk~p~pgGLvR~ 81 (506)
T PTZ00188 38 KPFKVGIIGAGPSALYCCKHLLKHERV-KVDIFEKLPNPYGLIRY 81 (506)
T ss_pred CCCEEEEECCcHHHHHHHHHHHHhcCC-eEEEEecCCCCccEEEE
Confidence 457899999999999999975 56798 69999999999997765
No 497
>PRK07818 dihydrolipoamide dehydrogenase; Reviewed
Probab=97.26 E-value=0.00026 Score=93.51 Aligned_cols=43 Identities=30% Similarity=0.589 Sum_probs=38.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
+.++||+|||||++|++||.+|++.|. +|+|+|+ +.+||.|..
T Consensus 2 ~~~~DvvIIG~GpaG~~AA~~aa~~G~-~V~lie~-~~~GG~c~~ 44 (466)
T PRK07818 2 MTHYDVVVLGAGPGGYVAAIRAAQLGL-KTAVVEK-KYWGGVCLN 44 (466)
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC-eEEEEec-CCCCCceec
Confidence 346899999999999999999999998 6999998 588997744
No 498
>PRK12775 putative trifunctional 2-polyprenylphenol hydroxylase/glutamate synthase subunit beta/ferritin domain-containing protein; Provisional
Probab=97.26 E-value=0.00029 Score=99.84 Aligned_cols=43 Identities=40% Similarity=0.678 Sum_probs=39.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
+.+||+|||||+|||+||++|+++|+ +|+|||+.+.+||.++.
T Consensus 429 ~~~kVaIIG~GPAGLsaA~~La~~G~-~VtV~E~~~~~GG~l~~ 471 (1006)
T PRK12775 429 KLGKVAICGSGPAGLAAAADLVKYGV-DVTVYEALHVVGGVLQY 471 (1006)
T ss_pred CCCEEEEECCCHHHHHHHHHHHHcCC-cEEEEecCCCCcceeec
Confidence 46799999999999999999999999 69999999999997653
No 499
>KOG2415 consensus Electron transfer flavoprotein ubiquinone oxidoreductase [Energy production and conversion]
Probab=97.26 E-value=0.00018 Score=85.18 Aligned_cols=43 Identities=42% Similarity=0.598 Sum_probs=37.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC------CCceEEEecCCCCCceEEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLG------YRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G------~~~VtVlEk~~riGG~~~t 63 (2280)
...||+|||||+||||||++|+|.- + +|.|+||...+||++-|
T Consensus 75 e~~Dv~IVG~GPAGLsaAIrlKQla~~~~~dl-rVcvvEKaa~~GghtlS 123 (621)
T KOG2415|consen 75 EEVDVVIVGAGPAGLSAAIRLKQLAAKANKDL-RVCVVEKAAEVGGHTLS 123 (621)
T ss_pred ccccEEEECCCchhHHHHHHHHHHHHhcCCce-EEEEEeeccccCCceec
Confidence 4579999999999999999997652 3 69999999999998876
No 500
>PRK08626 fumarate reductase flavoprotein subunit; Provisional
Probab=97.26 E-value=0.0011 Score=90.19 Aligned_cols=39 Identities=26% Similarity=0.311 Sum_probs=35.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+.||+|||||+|||+||..++++|. +|+|+||....+|.
T Consensus 5 ~~DVlVIG~G~AGl~AAi~Aae~G~-~VivleK~~~~~s~ 43 (657)
T PRK08626 5 YTDALVIGAGLAGLRVAIAAAQRGL-DTIVLSLVPAKRSH 43 (657)
T ss_pred eccEEEECccHHHHHHHHHHHHcCC-CEEEEeCCCCCCcc
Confidence 5799999999999999999999998 69999998887763
Done!