Query 037878
Match_columns 2280
No_of_seqs 1410 out of 9781
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 08:29:16 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037878.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/037878hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4dg8_A PA1221; ANL superfamily 100.0 8E-80 2.7E-84 833.2 46.6 572 465-1154 23-596 (620)
2 2vsq_A Surfactin synthetase su 100.0 2.2E-75 7.4E-80 855.5 52.8 579 468-1154 463-1043(1304)
3 3rg2_A Enterobactin synthase c 100.0 2E-74 7E-79 784.8 50.9 578 465-1152 23-614 (617)
4 1amu_A GRSA, gramicidin synthe 100.0 1.7E-65 5.7E-70 688.3 43.1 524 464-1097 34-558 (563)
5 3kxw_A Saframycin MX1 syntheta 100.0 5.4E-65 1.8E-69 691.8 45.6 542 467-1038 9-573 (590)
6 3ni2_A 4-coumarate:COA ligase; 100.0 1E-64 3.4E-69 678.8 46.4 509 460-1031 13-534 (536)
7 3etc_A AMP-binding protein; ad 100.0 2.2E-64 7.5E-69 679.2 46.6 500 470-1031 57-578 (580)
8 1pg4_A Acetyl-COA synthetase; 100.0 6.9E-64 2.4E-68 683.7 51.1 517 469-1033 76-622 (652)
9 4fuq_A Malonyl COA synthetase; 100.0 3.3E-64 1.1E-68 667.8 42.4 491 473-1032 4-500 (503)
10 3g7s_A Long-chain-fatty-acid-- 100.0 1.5E-64 5.3E-69 679.0 38.6 513 468-1032 18-542 (549)
11 3r44_A Fatty acyl COA syntheta 100.0 6.5E-64 2.2E-68 667.3 43.5 498 465-1033 12-514 (517)
12 3fce_A D-alanine--poly(phospho 100.0 9E-64 3.1E-68 666.5 42.7 505 469-1034 1-506 (512)
13 1mdb_A 2,3-dihydroxybenzoate-A 100.0 9.4E-64 3.2E-68 669.4 42.6 494 468-1033 24-532 (539)
14 4gr5_A Non-ribosomal peptide s 100.0 1.9E-64 6.3E-69 680.9 35.5 495 466-1029 72-568 (570)
15 3e7w_A D-alanine--poly(phospho 100.0 4.6E-63 1.6E-67 659.1 47.4 502 469-1032 1-503 (511)
16 1t5h_X 4-chlorobenzoyl COA lig 100.0 1.2E-62 4.1E-67 654.0 48.6 492 469-1031 2-503 (504)
17 1ry2_A Acetyl-coenzyme A synth 100.0 6E-63 2.1E-67 674.3 43.4 518 469-1032 82-637 (663)
18 3o83_A Peptide arylation enzym 100.0 2.1E-63 7.2E-68 666.7 34.6 496 467-1033 28-541 (544)
19 3c5e_A Acyl-coenzyme A synthet 100.0 6E-62 2.1E-66 654.7 45.4 504 469-1032 38-562 (570)
20 3gqw_A Fatty acid AMP ligase; 100.0 8.9E-62 3.1E-66 658.8 47.5 528 465-1034 17-565 (576)
21 3rix_A Luciferase, luciferin 4 100.0 6.6E-63 2.3E-67 663.3 34.0 501 468-1032 19-541 (550)
22 1v25_A Long-chain-fatty-acid-C 100.0 1.7E-62 5.8E-67 657.5 37.3 506 469-1032 18-536 (541)
23 3l8c_A D-alanine--poly(phospho 100.0 2.1E-62 7.1E-67 655.3 37.7 504 468-1033 3-513 (521)
24 2d1s_A Luciferase, luciferin 4 100.0 7.8E-62 2.7E-66 651.6 43.1 501 465-1033 21-544 (548)
25 3ivr_A Putative long-chain-fat 100.0 4.9E-62 1.7E-66 649.3 37.2 488 468-1033 5-502 (509)
26 3tsy_A Fusion protein 4-coumar 100.0 9.2E-62 3.2E-66 694.9 38.7 516 460-1040 52-590 (979)
27 3nyq_A Malonyl-COA ligase; A/B 100.0 1.2E-61 4.3E-66 642.9 33.5 477 469-1028 22-504 (505)
28 2v7b_A Benzoate-coenzyme A lig 100.0 1.8E-60 6.1E-65 637.4 39.7 491 469-1028 24-528 (529)
29 3ej6_A Catalase-3; heme, hydro 100.0 1.6E-61 5.5E-66 615.5 22.1 298 1710-2044 63-383 (688)
30 3ttv_A Catalase HPII; heme ori 100.0 1.2E-61 4.3E-66 618.4 20.8 298 1710-2044 120-440 (753)
31 1gwe_A Catalase; oxidoreductas 100.0 1.8E-61 6.3E-66 596.5 21.0 298 1710-2044 53-367 (503)
32 3ipl_A 2-succinylbenzoate--COA 100.0 8.8E-60 3E-64 626.7 38.5 476 470-1030 2-495 (501)
33 1qwl_A KATA catalase; beta bar 100.0 3.6E-61 1.2E-65 594.2 22.6 298 1710-2044 48-363 (505)
34 1a4e_A Catalase A; oxidoreduct 100.0 2.3E-61 7.8E-66 595.1 20.0 297 1710-2043 48-364 (488)
35 2isa_A Catalase; peroxidase, h 100.0 3.6E-61 1.2E-65 594.2 21.6 298 1710-2044 45-360 (483)
36 2j2m_A Catalase; functional cl 100.0 3.7E-61 1.3E-65 593.7 21.4 298 1710-2044 48-363 (491)
37 1si8_A Catalase; N-terminal AR 100.0 2.4E-61 8.2E-66 594.4 19.5 298 1710-2044 46-361 (484)
38 1m7s_A Catalase; beta barrel, 100.0 3.6E-61 1.2E-65 592.8 20.5 296 1710-2044 44-356 (484)
39 2xq1_A Peroxisomal catalase; o 100.0 2.8E-61 9.5E-66 595.7 19.3 297 1710-2043 59-373 (509)
40 3ite_A SIDN siderophore synthe 100.0 4.4E-60 1.5E-64 638.6 32.7 504 465-1033 16-544 (562)
41 1dgf_A Catalase; heme, NADPH, 100.0 4.3E-61 1.5E-65 593.9 19.4 292 1710-2036 63-372 (497)
42 3e4w_A Putative uncharacterize 100.0 1E-60 3.6E-65 566.5 20.8 283 1697-2021 17-312 (320)
43 2iuf_A Catalase; oxidoreductas 100.0 1.2E-60 4E-65 610.9 22.1 298 1710-2044 55-375 (688)
44 1sy7_A Catalase 1; heme oxidat 100.0 1.2E-57 4E-62 594.7 22.1 285 1710-2021 63-369 (715)
45 1u5u_A Allene oxide synthase-l 100.0 5.6E-56 1.9E-60 536.1 20.7 292 1711-2021 58-364 (374)
46 3t5a_A Long-chain-fatty-acid-- 100.0 2.4E-52 8.1E-57 553.1 38.4 422 468-911 23-480 (480)
47 3dy5_A Allene oxide synthase-l 100.0 1.4E-52 4.9E-57 567.3 21.4 298 1708-2020 56-363 (1066)
48 4gs5_A Acyl-COA synthetase (AM 100.0 1.5E-43 5E-48 446.7 22.7 316 634-1033 36-355 (358)
49 3qov_A Phenylacetate-coenzyme 100.0 4.3E-39 1.5E-43 419.6 30.8 329 632-1024 82-429 (436)
50 2y4o_A Phenylacetate-coenzyme 100.0 2.7E-38 9.3E-43 412.9 28.9 331 631-1024 88-436 (443)
51 2y27_A Phenylacetate-coenzyme 100.0 1.9E-37 6.6E-42 404.2 29.9 330 631-1024 86-431 (437)
52 3hgu_A EHPF; phenazine, antibi 99.9 7.7E-25 2.7E-29 278.4 17.6 236 632-921 88-368 (369)
53 2b9w_A Putative aminooxidase; 99.8 3.5E-20 1.2E-24 240.5 26.7 376 19-423 4-419 (424)
54 3fs8_A QDTC; acetyltransferase 99.8 1.7E-17 5.8E-22 200.7 21.7 96 1574-1674 125-220 (273)
55 3hsq_A Acyl-[acyl-carrier-prot 99.8 1.9E-17 6.6E-22 197.7 21.2 86 1574-1674 104-189 (259)
56 3r0s_A Acyl-[acyl-carrier-prot 99.7 1.2E-17 4E-22 200.1 18.5 109 1574-1699 109-223 (266)
57 3eh0_A UDP-3-O-[3-hydroxymyris 99.7 2.8E-17 9.5E-22 203.7 19.2 98 1574-1673 201-308 (341)
58 1j2z_A Acyl-[acyl-carrier-prot 99.7 5.1E-17 1.7E-21 194.5 20.6 87 1574-1675 105-191 (270)
59 3t57_A UDP-N-acetylglucosamine 99.7 3.8E-17 1.3E-21 199.4 19.9 53 1620-1674 166-218 (305)
60 3pmo_A UDP-3-O-[3-hydroxymyris 99.7 1.9E-17 6.7E-22 206.3 16.9 98 1574-1673 223-330 (372)
61 1s3e_A Amine oxidase [flavin-c 99.7 1.7E-16 5.8E-21 211.1 26.1 247 19-271 2-293 (520)
62 4eqy_A Acyl-[acyl-carrier-prot 99.7 6.2E-17 2.1E-21 195.7 17.5 86 1574-1674 126-211 (283)
63 4e79_A UDP-3-O-acylglucosamine 99.7 8.1E-17 2.8E-21 200.1 18.0 97 1574-1672 206-312 (357)
64 2qia_A UDP-N-acetylglucosamine 99.7 1.3E-16 4.4E-21 191.4 19.1 86 1574-1674 109-194 (262)
65 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.7 5.7E-17 2E-21 204.0 16.2 53 1619-1673 283-335 (374)
66 4e6u_A Acyl-[acyl-carrier-prot 99.7 1.6E-16 5.5E-21 190.6 17.7 85 1574-1673 111-195 (265)
67 2ivd_A PPO, PPOX, protoporphyr 99.7 4E-16 1.4E-20 205.7 19.2 209 179-407 228-450 (478)
68 3i6d_A Protoporphyrinogen oxid 99.7 1.2E-15 4.2E-20 200.7 22.3 207 179-408 225-446 (470)
69 4fce_A Bifunctional protein GL 99.7 2E-16 6.9E-21 207.1 14.0 94 1574-1676 356-449 (459)
70 3nks_A Protoporphyrinogen oxid 99.7 9.3E-16 3.2E-20 202.1 20.3 207 179-407 224-451 (477)
71 2yg5_A Putrescine oxidase; oxi 99.7 2E-15 6.8E-20 197.5 22.5 241 20-267 4-289 (453)
72 1sez_A Protoporphyrinogen oxid 99.6 9.1E-16 3.1E-20 203.6 17.7 211 180-408 234-471 (504)
73 2vvm_A Monoamine oxidase N; FA 99.6 6.8E-15 2.3E-19 194.7 25.5 358 22-408 40-460 (495)
74 3mqg_A Lipopolysaccharides bio 99.6 2.7E-15 9.2E-20 171.0 17.9 80 1594-1675 70-153 (192)
75 4dgk_A Phytoene dehydrogenase; 99.6 1.4E-15 4.8E-20 201.7 17.0 64 179-245 211-277 (501)
76 4gde_A UDP-galactopyranose mut 99.6 3.1E-15 1E-19 199.2 19.7 200 180-405 213-450 (513)
77 3lov_A Protoporphyrinogen oxid 99.6 7.2E-15 2.5E-19 193.4 21.3 206 178-408 225-443 (475)
78 3nrn_A Uncharacterized protein 99.6 1.2E-14 4.2E-19 187.9 22.7 349 22-408 1-382 (421)
79 2v0h_A Bifunctional protein GL 99.6 2.2E-15 7.6E-20 197.0 15.6 94 1574-1676 353-446 (456)
80 1hm9_A GLMU, UDP-N-acetylgluco 99.6 5E-15 1.7E-19 194.1 18.1 92 1574-1674 361-452 (468)
81 2iid_A L-amino-acid oxidase; f 99.6 1.3E-14 4.6E-19 192.0 21.8 93 178-272 230-324 (498)
82 3ka7_A Oxidoreductase; structu 99.6 5.8E-15 2E-19 191.4 17.6 359 22-408 1-402 (425)
83 1rsg_A FMS1 protein; FAD bindi 99.6 2.6E-14 8.9E-19 189.6 20.8 88 182-274 196-296 (516)
84 4dsg_A UDP-galactopyranose mut 99.6 8.4E-14 2.9E-18 182.2 24.9 206 181-409 208-430 (484)
85 3k7m_X 6-hydroxy-L-nicotine ox 99.6 7.5E-14 2.6E-18 181.3 22.2 82 183-269 201-282 (431)
86 3r3r_A Ferripyochelin binding 99.5 7.6E-14 2.6E-18 158.3 18.8 101 1593-1706 83-183 (187)
87 3tv0_A Dynactin subunit 6; LEF 99.5 6.2E-14 2.1E-18 159.7 16.7 98 1594-1703 86-187 (194)
88 3r1w_A Carbonic anhydrase; bet 99.5 6.6E-14 2.2E-18 159.2 15.8 100 1592-1704 86-185 (189)
89 2xag_A Lysine-specific histone 99.5 6.6E-14 2.3E-18 191.2 18.2 177 178-371 561-752 (852)
90 2jae_A L-amino acid oxidase; o 99.5 4.2E-13 1.4E-17 177.2 24.9 73 178-252 228-302 (489)
91 3qj4_A Renalase; FAD/NAD(P)-bi 99.5 1.4E-13 4.7E-18 172.8 19.3 300 22-409 2-321 (342)
92 2z3y_A Lysine-specific histone 99.5 6.2E-14 2.1E-18 190.3 15.8 177 178-371 390-581 (662)
93 3ixc_A Hexapeptide transferase 99.5 1.2E-13 4E-18 156.8 15.4 95 1593-1700 95-189 (191)
94 1xhd_A Putative acetyltransfer 99.5 2.2E-13 7.5E-18 152.1 16.0 98 1592-1702 72-169 (173)
95 3vbi_A ANTD, galactoside O-ace 99.5 8.5E-14 2.9E-18 160.3 12.4 55 1619-1675 131-185 (205)
96 3st8_A Bifunctional protein GL 99.5 3.6E-13 1.2E-17 177.2 19.6 173 1317-1672 283-460 (501)
97 3pmo_A UDP-3-O-[3-hydroxymyris 99.5 1E-12 3.4E-17 163.9 22.0 54 1619-1672 259-312 (372)
98 1v3w_A Ferripyochelin binding 99.5 3.2E-13 1.1E-17 150.7 15.0 100 1592-1704 70-169 (173)
99 2cq8_A 10-formyltetrahydrofola 99.5 6.9E-14 2.4E-18 138.5 8.1 77 1076-1154 20-98 (110)
100 1krr_A Galactoside O-acetyltra 99.4 2.7E-13 9.1E-18 153.4 12.7 104 1573-1679 75-185 (203)
101 3r0s_A Acyl-[acyl-carrier-prot 99.4 1.2E-12 4.1E-17 156.6 19.1 87 1575-1672 85-176 (266)
102 4gut_A Lysine-specific histone 99.4 1.6E-13 5.3E-18 186.8 12.3 87 178-270 523-611 (776)
103 2ggo_A 401AA long hypothetical 99.4 1.1E-12 3.6E-17 168.4 18.6 46 1621-1668 355-400 (401)
104 3jqy_B NEUO, polysialic acid O 99.4 1.7E-13 5.9E-18 162.5 10.0 100 1575-1676 107-215 (252)
105 4eqy_A Acyl-[acyl-carrier-prot 99.4 1.8E-12 6.3E-17 156.5 18.2 86 1575-1671 102-192 (283)
106 3ftt_A Putative acetyltransfer 99.4 4.1E-13 1.4E-17 153.0 11.3 105 1573-1680 74-185 (199)
107 3hsq_A Acyl-[acyl-carrier-prot 99.4 2.5E-12 8.6E-17 153.4 18.3 86 1574-1670 80-169 (259)
108 1b37_A Protein (polyamine oxid 99.4 3E-12 1E-16 167.9 19.9 80 184-267 201-293 (472)
109 4e79_A UDP-3-O-acylglucosamine 99.4 7.5E-12 2.6E-16 155.5 22.3 54 1619-1672 242-295 (357)
110 3nz2_A Hexapeptide-repeat cont 99.4 8.1E-13 2.8E-17 150.0 12.5 104 1573-1679 76-186 (195)
111 3hjj_A Maltose O-acetyltransfe 99.4 1.1E-12 3.9E-17 148.3 12.9 104 1573-1679 78-188 (190)
112 2qia_A UDP-N-acetylglucosamine 99.4 5.1E-12 1.7E-16 151.4 18.6 85 1575-1670 85-174 (262)
113 1j2z_A Acyl-[acyl-carrier-prot 99.4 5.4E-12 1.9E-16 150.9 18.4 85 1575-1670 81-170 (270)
114 4i4d_A Peptide synthetase NRPS 99.4 3.7E-13 1.3E-17 132.9 6.6 75 1078-1154 13-87 (93)
115 3mc4_A WW/RSP5/WWP domain:bact 99.4 2.1E-12 7.1E-17 151.6 14.1 106 1569-1676 160-268 (287)
116 3srt_A Maltose O-acetyltransfe 99.4 1.4E-12 4.8E-17 147.1 11.9 104 1573-1679 76-186 (188)
117 1ocx_A Maltose O-acetyltransfe 99.4 1.1E-12 3.8E-17 146.4 10.9 99 1573-1673 72-177 (182)
118 3eh0_A UDP-3-O-[3-hydroxymyris 99.4 1.4E-11 4.7E-16 152.7 20.9 54 1619-1672 237-290 (341)
119 2p2o_A Maltose transacetylase; 99.3 2.1E-12 7.1E-17 144.8 10.5 103 1573-1678 74-183 (185)
120 1dny_A Non-ribosomal peptide s 99.3 9.1E-13 3.1E-17 129.2 6.7 75 1077-1153 10-84 (91)
121 3t57_A UDP-N-acetylglucosamine 99.3 2.2E-11 7.4E-16 148.6 19.8 86 1574-1670 109-198 (305)
122 3eev_A Chloramphenicol acetylt 99.3 4.6E-12 1.6E-16 146.1 12.3 113 1573-1687 24-174 (212)
123 3r8y_A 2,3,4,5-tetrahydropyrid 99.3 1.5E-11 5.1E-16 145.1 16.6 80 1594-1679 140-219 (240)
124 4ea9_A Perosamine N-acetyltran 99.3 1.3E-11 4.3E-16 143.8 14.8 67 1594-1673 148-214 (220)
125 4hur_A Virginiamycin A acetylt 99.3 1.5E-11 5.1E-16 142.6 14.3 113 1573-1687 35-182 (220)
126 1ssq_A SAT, serine acetyltrans 99.3 1.1E-11 3.6E-16 145.1 12.7 103 1570-1674 134-239 (267)
127 1t3d_A SAT, serine acetyltrans 99.3 1.7E-11 5.9E-16 144.3 14.3 107 1570-1679 154-263 (289)
128 2wlg_A Polysialic acid O-acety 99.3 1.8E-11 6.2E-16 141.7 14.1 100 1575-1676 81-190 (215)
129 3kwd_A Carbon dioxide concentr 99.3 1.7E-11 5.9E-16 141.8 13.6 73 1594-1679 112-190 (213)
130 1xat_A Xenobiotic acetyltransf 99.3 1.6E-11 5.5E-16 139.8 12.9 109 1570-1680 19-166 (212)
131 2bcg_G Secretory pathway GDP d 99.3 2.4E-11 8.2E-16 157.9 16.2 50 18-68 8-57 (453)
132 3f1x_A Serine acetyltransferas 99.3 1.9E-11 6.4E-16 145.7 13.0 102 1572-1675 189-302 (310)
133 4e6u_A Acyl-[acyl-carrier-prot 99.2 7E-11 2.4E-15 141.6 17.3 86 1575-1671 87-177 (265)
134 2iu8_A LPXD, UDP-3-O-[3-hydrox 99.2 1.1E-10 3.6E-15 147.0 19.2 86 1574-1670 229-316 (374)
135 3bfp_A Acetyltransferase; LEFT 99.2 4.9E-11 1.7E-15 135.5 14.6 84 1575-1673 109-192 (194)
136 1yvv_A Amine oxidase, flavin-c 99.2 2.6E-10 8.9E-15 142.5 22.1 289 21-408 2-305 (336)
137 4e8l_A Virginiamycin A acetylt 99.2 3.7E-11 1.2E-15 137.6 12.9 106 1573-1680 34-174 (219)
138 3lax_A Phenylacetate-coenzyme 99.2 4.6E-11 1.6E-15 122.0 11.4 97 910-1023 1-101 (109)
139 3fsy_A Tetrahydrodipicolinate 99.2 1.5E-11 5.2E-16 142.4 8.1 89 1574-1671 192-288 (332)
140 3p1w_A Rabgdi protein; GDI RAB 99.2 1.3E-10 4.4E-15 148.4 17.1 61 178-241 245-309 (475)
141 3q1x_A Serine acetyltransferas 99.2 5.1E-11 1.7E-15 142.4 11.3 103 1570-1674 160-275 (313)
142 1qre_A Carbonic anhydrase; bet 99.2 8.7E-11 3E-15 138.8 13.1 54 1336-1400 59-116 (247)
143 2bi7_A UDP-galactopyranose mut 99.2 2.6E-11 9E-16 153.6 8.9 46 21-67 3-48 (384)
144 1krr_A Galactoside O-acetyltra 99.2 2.7E-11 9.3E-16 136.9 7.6 90 2184-2274 73-167 (203)
145 1mr7_A Streptogramin A acetylt 99.2 1E-10 3.5E-15 133.3 12.1 107 1572-1680 28-169 (209)
146 2e1m_A L-glutamate oxidase; L- 99.1 1.5E-10 5.1E-15 144.0 14.2 48 18-66 41-89 (376)
147 3eg4_A 2,3,4,5-tetrahydropyrid 99.1 3.6E-10 1.2E-14 136.0 16.6 66 1312-1396 124-189 (304)
148 3gos_A 2,3,4,5-tetrahydropyrid 99.1 1.7E-10 5.9E-15 137.6 13.4 75 1594-1671 152-241 (276)
149 3ayj_A Pro-enzyme of L-phenyla 99.1 8.9E-11 3E-15 155.7 12.0 97 178-274 336-478 (721)
150 3fs8_A QDTC; acetyltransferase 99.1 5.5E-10 1.9E-14 134.8 17.3 85 1573-1670 106-200 (273)
151 3tk8_A 2,3,4,5-tetrahydropyrid 99.1 1.2E-10 4.3E-15 140.1 11.5 93 1574-1671 175-282 (316)
152 1v0j_A UDP-galactopyranose mut 99.1 9.2E-12 3.1E-16 158.9 1.7 48 18-66 4-52 (399)
153 3r5d_A Tetrahydrodipicolinate 99.1 7.5E-11 2.6E-15 137.8 8.8 77 1574-1659 215-291 (347)
154 3gxs_A Phenylacetate-coenzyme 99.1 1.6E-10 5.6E-15 117.7 10.3 97 910-1024 1-102 (109)
155 1d5t_A Guanine nucleotide diss 99.1 3E-10 1E-14 146.5 15.0 47 18-65 3-49 (433)
156 3ftt_A Putative acetyltransfer 99.1 1.3E-10 4.5E-15 132.2 9.5 85 2189-2274 77-166 (199)
157 1i8t_A UDP-galactopyranose mut 99.1 1.2E-10 4.2E-15 146.6 9.8 46 22-68 2-47 (367)
158 3kwd_A Carbon dioxide concentr 99.1 4.4E-10 1.5E-14 129.9 13.0 75 1574-1665 112-186 (213)
159 1ocx_A Maltose O-acetyltransfe 99.1 1.2E-10 4E-15 130.0 7.3 91 2183-2274 69-164 (182)
160 3srt_A Maltose O-acetyltransfe 99.1 9E-11 3.1E-15 132.3 6.4 103 2171-2274 61-168 (188)
161 4f6l_B AUSA reductase domain p 99.1 1.6E-11 5.3E-16 162.5 0.0 75 1077-1154 41-115 (508)
162 2afd_A Protein ASL1650; twiste 99.0 3.4E-10 1.2E-14 110.8 8.9 76 1078-1153 11-86 (88)
163 3nz2_A Hexapeptide-repeat cont 99.0 1.5E-10 5E-15 131.4 7.1 108 2166-2274 56-168 (195)
164 2p2o_A Maltose transacetylase; 99.0 1.4E-10 4.7E-15 130.0 6.4 92 2182-2274 70-166 (185)
165 3hjj_A Maltose O-acetyltransfe 99.0 1.8E-10 6.1E-15 130.3 7.1 108 2166-2274 57-170 (190)
166 2v0h_A Bifunctional protein GL 99.0 2.8E-10 9.5E-15 148.6 9.5 51 1621-1671 368-425 (456)
167 1v3w_A Ferripyochelin binding 99.0 7.8E-10 2.7E-14 123.2 11.7 70 1575-1658 73-143 (173)
168 2pig_A Putative transferase; S 99.0 7E-10 2.4E-14 134.7 11.7 51 1621-1671 261-315 (334)
169 2jgp_A Tyrocidine synthetase 3 99.0 3.4E-10 1.2E-14 150.5 9.5 107 1077-1196 6-112 (520)
170 1qre_A Carbonic anhydrase; bet 99.0 9.3E-10 3.2E-14 130.0 12.0 60 1317-1384 59-118 (247)
171 2kr5_A PKS, aflatoxin biosynth 99.0 6.7E-10 2.3E-14 108.8 8.9 75 1078-1152 8-84 (89)
172 4fce_A Bifunctional protein GL 99.0 1.5E-09 5.1E-14 141.8 14.9 65 1594-1670 356-427 (459)
173 1xhd_A Putative acetyltransfer 99.0 1.4E-09 4.9E-14 121.1 12.5 70 1575-1658 75-145 (173)
174 3tv0_A Dynactin subunit 6; LEF 99.0 2.1E-09 7.1E-14 122.2 13.6 72 1573-1658 85-156 (194)
175 3mc4_A WW/RSP5/WWP domain:bact 99.0 1.6E-09 5.5E-14 127.3 12.9 102 1313-1415 160-269 (287)
176 2ju1_A Erythronolide synthase; 99.0 5.9E-10 2E-14 110.8 7.3 75 1079-1153 18-93 (95)
177 3ixc_A Hexapeptide transferase 99.0 2.1E-09 7E-14 121.9 12.7 71 1574-1658 96-167 (191)
178 3r1w_A Carbonic anhydrase; bet 98.9 5.1E-09 1.7E-13 118.7 13.8 63 1574-1650 88-150 (189)
179 1hm9_A GLMU, UDP-N-acetylgluco 98.9 5.5E-09 1.9E-13 136.7 15.8 64 1594-1669 361-431 (468)
180 3mqg_A Lipopolysaccharides bio 98.9 3.4E-09 1.2E-13 120.4 11.7 96 1317-1414 33-154 (192)
181 2liu_A CURA; holo state, trans 98.9 2.1E-09 7.2E-14 107.7 8.7 77 1078-1154 18-94 (99)
182 3eev_A Chloramphenicol acetylt 98.9 2.9E-09 9.9E-14 122.6 10.7 97 1317-1414 24-163 (212)
183 3c8v_A Putative acetyltransfer 98.9 3E-09 1E-13 135.2 11.5 71 1594-1673 343-415 (496)
184 1t3d_A SAT, serine acetyltrans 98.9 3.3E-09 1.1E-13 124.9 10.7 94 1317-1414 163-261 (289)
185 1ssq_A SAT, serine acetyltrans 98.9 3.3E-09 1.1E-13 124.1 10.3 94 1317-1414 143-241 (267)
186 3gos_A 2,3,4,5-tetrahydropyrid 98.9 1.5E-08 5E-13 121.0 15.6 76 1593-1681 177-260 (276)
187 3r3r_A Ferripyochelin binding 98.9 8.3E-09 2.8E-13 116.8 12.7 71 1574-1658 84-155 (187)
188 3tej_A Enterobactin synthase c 98.9 1.7E-09 5.8E-14 134.5 7.3 75 1077-1153 7-81 (329)
189 3c8v_A Putative acetyltransfer 98.8 3.3E-09 1.1E-13 134.8 9.6 67 1593-1671 325-397 (496)
190 4hur_A Virginiamycin A acetylt 98.8 6.5E-09 2.2E-13 120.4 11.3 97 1316-1414 34-171 (220)
191 3eg4_A 2,3,4,5-tetrahydropyrid 98.8 1.1E-08 3.8E-13 123.0 12.1 61 1592-1668 201-261 (304)
192 2ggo_A 401AA long hypothetical 98.8 2E-08 6.8E-13 128.6 15.1 63 1318-1398 233-295 (401)
193 2lol_A ACP, acyl carrier prote 98.8 1E-08 3.6E-13 98.3 9.4 75 1079-1153 4-79 (81)
194 1xat_A Xenobiotic acetyltransf 98.8 1.2E-08 4.3E-13 116.0 11.6 101 1313-1414 18-162 (212)
195 3f1x_A Serine acetyltransferas 98.8 1.5E-08 5.2E-13 120.8 12.5 95 1318-1413 197-302 (310)
196 3hdq_A UDP-galactopyranose mut 98.8 6.8E-10 2.3E-14 139.3 0.6 46 19-65 27-72 (397)
197 3vbi_A ANTD, galactoside O-ace 98.8 7.1E-09 2.4E-13 119.1 8.4 51 1363-1414 132-186 (205)
198 1l0i_A Acyl carrier protein; a 98.8 8.1E-09 2.8E-13 98.3 7.3 72 1081-1152 3-75 (78)
199 2cnr_A FAS, ACP, acyl carrier 98.8 1.8E-08 6.1E-13 96.9 9.7 75 1078-1152 4-79 (82)
200 2l22_A Mupirocin didomain acyl 98.8 2.2E-08 7.5E-13 115.4 12.1 77 1079-1155 24-100 (212)
201 4e8l_A Virginiamycin A acetylt 98.8 1.7E-08 5.9E-13 115.5 10.9 97 1317-1414 34-170 (219)
202 2ehs_A ACP, acyl carrier prote 98.8 9.5E-09 3.2E-13 97.6 7.2 72 1082-1153 2-74 (77)
203 2ava_A ACP I, acyl carrier pro 98.8 1.1E-08 3.7E-13 98.4 7.6 75 1080-1154 3-78 (82)
204 3q1x_A Serine acetyltransferas 98.7 2.5E-08 8.4E-13 119.3 11.8 101 1315-1415 161-278 (313)
205 4ea9_A Perosamine N-acetyltran 98.7 2.2E-08 7.7E-13 116.3 10.3 93 1317-1411 111-214 (220)
206 1x3o_A Acyl carrier protein; s 98.7 2E-08 6.7E-13 96.1 7.9 75 1079-1153 3-78 (80)
207 2kjs_A Putative acyl carrier p 98.7 1.8E-08 6.1E-13 96.9 7.0 73 1083-1155 4-77 (87)
208 3tk8_A 2,3,4,5-tetrahydropyrid 98.7 7.9E-08 2.7E-12 115.8 13.2 51 1594-1655 219-276 (316)
209 2dnw_A Acyl carrier protein; A 98.7 4E-08 1.4E-12 97.9 8.9 78 1077-1154 11-89 (99)
210 2wlg_A Polysialic acid O-acety 98.7 3.5E-08 1.2E-12 114.0 9.8 98 1318-1415 80-191 (215)
211 3v76_A Flavoprotein; structura 98.7 1.1E-07 3.7E-12 121.3 14.8 42 19-61 25-66 (417)
212 1mr7_A Streptogramin A acetylt 98.7 3.6E-08 1.2E-12 112.3 9.3 99 1315-1414 27-165 (209)
213 3jqy_B NEUO, polysialic acid O 98.7 2.6E-08 8.9E-13 118.0 8.5 97 1318-1415 106-216 (252)
214 3bfp_A Acetyltransferase; LEFT 98.7 5E-08 1.7E-12 110.7 10.4 94 1317-1412 87-193 (194)
215 2rij_A Putative 2,3,4,5-tetrah 98.6 4E-08 1.4E-12 119.2 8.5 68 1594-1669 265-332 (387)
216 3gzm_A Acyl carrier protein; h 98.6 6.2E-08 2.1E-12 92.7 8.0 75 1079-1153 3-78 (81)
217 3dme_A Conserved exported prot 98.6 2.1E-07 7.3E-12 117.5 15.3 41 19-60 2-42 (369)
218 3fsy_A Tetrahydrodipicolinate 98.6 5.3E-08 1.8E-12 113.1 8.2 84 1316-1404 172-270 (332)
219 2l22_A Mupirocin didomain acyl 98.6 7.4E-08 2.5E-12 111.0 9.4 76 1079-1154 128-203 (212)
220 3r8y_A 2,3,4,5-tetrahydropyrid 98.6 7.9E-08 2.7E-12 113.2 9.8 97 1317-1415 103-218 (240)
221 1klp_A ACP, ACPM, meromycolate 98.6 1.8E-07 6.2E-12 95.9 11.2 79 1078-1156 4-83 (115)
222 1f80_D Acyl carrier protein; t 98.6 4.1E-08 1.4E-12 94.1 5.7 74 1079-1152 5-79 (81)
223 3r5d_A Tetrahydrodipicolinate 98.6 5.9E-08 2E-12 113.6 7.8 64 1337-1405 231-294 (347)
224 2pig_A Putative transferase; S 98.6 5.9E-07 2E-11 109.1 17.0 49 1621-1669 242-291 (334)
225 2qnw_A Acyl carrier protein; m 98.6 1.1E-07 3.8E-12 91.3 8.4 75 1079-1153 5-80 (82)
226 3kkj_A Amine oxidase, flavin-c 98.5 4.6E-08 1.6E-12 118.3 5.7 48 21-69 2-49 (336)
227 2i0z_A NAD(FAD)-utilizing dehy 98.5 2.4E-07 8.2E-12 120.0 11.8 40 20-60 25-64 (447)
228 3dje_A Fructosyl amine: oxygen 98.5 5E-07 1.7E-11 117.1 14.7 43 18-60 3-45 (438)
229 2l3v_A ACP, acyl carrier prote 98.5 1.4E-08 4.6E-13 97.0 -0.1 72 1081-1152 4-76 (79)
230 1or5_A Acyl carrier protein; A 98.5 8.1E-08 2.8E-12 92.5 5.0 71 1082-1152 5-78 (83)
231 2kwl_A ACP, acyl carrier prote 98.5 3E-07 1E-11 88.7 8.9 76 1078-1153 6-82 (84)
232 1nq4_A Oxytetracycline polyket 98.5 1.9E-07 6.6E-12 91.9 7.0 73 1083-1155 6-82 (95)
233 3ejb_A Acyl carrier protein; p 98.5 1.4E-07 4.9E-12 93.1 6.1 75 1078-1152 19-94 (97)
234 2gqf_A Hypothetical protein HI 98.4 5E-07 1.7E-11 114.8 12.5 43 18-61 1-43 (401)
235 1yp2_A Glucose-1-phosphate ade 98.4 2.2E-07 7.5E-12 120.7 9.1 63 1574-1655 389-451 (451)
236 3nyc_A D-arginine dehydrogenas 98.4 3.4E-07 1.2E-11 116.2 10.2 39 20-60 8-46 (381)
237 3oz2_A Digeranylgeranylglycero 98.4 5.6E-07 1.9E-11 114.8 11.3 40 19-59 2-41 (397)
238 1af8_A Actinorhodin polyketide 98.4 2.1E-07 7.1E-12 90.2 5.5 73 1082-1154 6-82 (86)
239 3nix_A Flavoprotein/dehydrogen 98.4 7.7E-07 2.6E-11 114.7 12.5 47 195-241 115-161 (421)
240 4a9w_A Monooxygenase; baeyer-v 98.4 3.8E-07 1.3E-11 114.6 8.2 39 21-60 3-41 (357)
241 3ps9_A TRNA 5-methylaminomethy 98.4 2.1E-06 7.2E-11 117.3 16.2 39 20-59 271-309 (676)
242 2jq4_A AGR_C_4658P, hypothetic 98.3 4.7E-07 1.6E-11 90.7 6.9 78 1078-1155 19-100 (105)
243 3pvc_A TRNA 5-methylaminomethy 98.3 1.2E-06 4E-11 119.9 13.1 40 20-60 263-302 (689)
244 3gwf_A Cyclohexanone monooxyge 98.3 7E-07 2.4E-11 117.7 9.7 41 20-61 7-48 (540)
245 3rp8_A Flavoprotein monooxygen 98.3 2.7E-06 9.2E-11 109.0 14.9 44 14-58 16-59 (407)
246 1vku_A Acyl carrier protein; T 98.3 1.3E-06 4.6E-11 86.3 8.6 78 1079-1156 15-92 (100)
247 1qo8_A Flavocytochrome C3 fuma 98.3 1.7E-06 5.8E-11 115.5 12.4 41 19-60 119-159 (566)
248 2qa1_A PGAE, polyketide oxygen 98.3 2.7E-06 9.3E-11 111.4 14.0 43 15-58 5-47 (500)
249 3uox_A Otemo; baeyer-villiger 98.3 1.7E-06 5.9E-11 114.2 11.8 41 20-61 8-48 (545)
250 2oln_A NIKD protein; flavoprot 98.3 2E-06 6.7E-11 109.9 11.9 38 20-58 3-40 (397)
251 1vg0_A RAB proteins geranylger 98.3 6.4E-06 2.2E-10 108.1 16.7 50 17-67 4-53 (650)
252 1y0p_A Fumarate reductase flav 98.3 2.4E-06 8.1E-11 114.3 12.8 42 19-61 124-165 (571)
253 3st8_A Bifunctional protein GL 98.2 2.5E-06 8.5E-11 112.0 11.9 80 1573-1667 352-438 (501)
254 2uzz_A N-methyl-L-tryptophan o 98.2 1.8E-06 6.2E-11 109.1 10.2 38 21-59 2-39 (372)
255 2rij_A Putative 2,3,4,5-tetrah 98.2 1.1E-06 3.8E-11 106.8 7.3 89 1316-1406 228-329 (387)
256 4hb9_A Similarities with proba 98.2 9.1E-07 3.1E-11 113.5 7.1 50 189-241 112-161 (412)
257 4ap3_A Steroid monooxygenase; 98.2 2.6E-06 8.8E-11 112.6 11.4 41 20-61 20-60 (549)
258 1y56_B Sarcosine oxidase; dehy 98.2 5.3E-06 1.8E-10 105.3 14.0 38 20-59 4-41 (382)
259 2gag_B Heterotetrameric sarcos 98.2 4.7E-06 1.6E-10 106.6 13.6 38 20-58 20-59 (405)
260 3cgv_A Geranylgeranyl reductas 98.2 1.2E-06 4.1E-11 111.8 7.6 39 20-59 3-41 (397)
261 1ryi_A Glycine oxidase; flavop 98.2 2.1E-06 7.3E-11 108.9 9.8 40 19-59 15-54 (382)
262 3ihg_A RDME; flavoenzyme, anth 98.2 2.9E-06 1E-10 112.7 11.4 38 20-58 4-41 (535)
263 3i3l_A Alkylhalidase CMLS; fla 98.2 4.4E-06 1.5E-10 111.0 12.9 43 15-58 17-59 (591)
264 2amw_A Hypothetical protein NE 98.2 2.3E-06 7.7E-11 82.2 7.4 73 1082-1154 3-81 (83)
265 2gf3_A MSOX, monomeric sarcosi 98.2 1.5E-06 5.1E-11 110.7 7.7 37 21-58 3-39 (389)
266 2qa2_A CABE, polyketide oxygen 98.2 6.8E-06 2.3E-10 107.6 13.8 54 187-241 108-161 (499)
267 4dxe_H ACP, acyl carrier prote 98.2 1.9E-06 6.7E-11 85.3 6.4 73 1080-1152 25-98 (101)
268 4at0_A 3-ketosteroid-delta4-5a 98.2 1.1E-05 3.7E-10 106.3 15.5 41 20-61 40-80 (510)
269 2cg5_B Fatty acid synthase; tr 98.2 2.4E-06 8.3E-11 81.9 6.7 69 1084-1153 9-78 (91)
270 2gv8_A Monooxygenase; FMO, FAD 98.1 3.8E-06 1.3E-10 108.9 10.9 43 19-61 4-47 (447)
271 3alj_A 2-methyl-3-hydroxypyrid 98.1 7.7E-06 2.6E-10 103.6 13.4 40 19-59 9-48 (379)
272 2vou_A 2,6-dihydroxypyridine h 98.1 1.1E-05 3.6E-10 103.0 14.5 37 20-57 4-40 (397)
273 3c96_A Flavin-containing monoo 98.1 1E-05 3.6E-10 103.6 14.0 41 18-59 1-42 (410)
274 2lte_A Specialized acyl carrie 97.4 3.4E-07 1.2E-11 91.2 0.0 72 1082-1153 27-98 (103)
275 3ab1_A Ferredoxin--NADP reduct 98.1 4E-06 1.4E-10 105.5 9.8 43 18-61 11-53 (360)
276 3f8d_A Thioredoxin reductase ( 98.1 2.6E-06 8.9E-11 105.2 7.6 37 21-60 15-51 (323)
277 2kw2_A Specialized acyl carrie 98.1 1.9E-06 6.3E-11 86.0 5.0 75 1081-1155 3-89 (101)
278 3e1t_A Halogenase; flavoprotei 98.1 4.1E-06 1.4E-10 110.4 9.8 51 191-241 116-167 (512)
279 1w4x_A Phenylacetone monooxyge 98.1 9.3E-06 3.2E-10 107.7 13.0 42 19-61 14-55 (542)
280 1d4d_A Flavocytochrome C fumar 98.1 1.4E-05 4.9E-10 106.4 14.9 41 20-61 125-165 (572)
281 2zbw_A Thioredoxin reductase; 98.1 9.2E-06 3.1E-10 101.0 11.7 41 20-61 4-44 (335)
282 3fmw_A Oxygenase; mithramycin, 98.1 5.7E-06 2E-10 109.8 10.2 47 194-241 156-202 (570)
283 3nlc_A Uncharacterized protein 98.1 9.9E-06 3.4E-10 105.9 12.0 40 21-61 107-146 (549)
284 3d1c_A Flavin-containing putat 98.0 8.1E-06 2.8E-10 103.0 10.4 40 20-60 3-42 (369)
285 2l4b_A Acyl carrier protein; i 98.0 3.7E-06 1.3E-10 81.7 5.4 76 1079-1154 6-85 (88)
286 3itj_A Thioredoxin reductase 1 98.0 3.3E-06 1.1E-10 105.1 6.5 41 19-60 20-64 (338)
287 3da1_A Glycerol-3-phosphate de 98.0 8.4E-06 2.9E-10 108.2 10.7 40 20-60 17-56 (561)
288 1dv5_A APO-DCP, APO-D-alanyl c 98.0 8.6E-06 2.9E-10 77.4 7.7 73 1080-1152 3-78 (80)
289 2l9f_A CALE8, meacp; transfera 98.0 1.4E-05 4.7E-10 77.0 8.8 77 1079-1155 12-90 (102)
290 1pj5_A N,N-dimethylglycine oxi 98.0 1.8E-05 6.1E-10 110.7 13.8 39 19-57 2-40 (830)
291 4b2g_A GH3-1 auxin conjugating 98.0 3.7E-05 1.3E-09 99.7 15.4 62 850-935 393-459 (609)
292 3atr_A Conserved archaeal prot 98.0 1.3E-05 4.4E-10 104.1 11.2 37 20-57 5-41 (453)
293 2xve_A Flavin-containing monoo 98.0 1.1E-05 3.8E-10 104.7 10.5 39 22-61 3-47 (464)
294 3lzw_A Ferredoxin--NADP reduct 98.0 7.6E-06 2.6E-10 101.5 8.6 40 21-61 7-46 (332)
295 2r0c_A REBC; flavin adenine di 98.0 6.9E-06 2.4E-10 109.1 8.7 38 21-59 26-63 (549)
296 3s5w_A L-ornithine 5-monooxyge 98.0 5.3E-06 1.8E-10 108.2 7.3 38 21-59 30-72 (463)
297 2x3n_A Probable FAD-dependent 98.0 4.9E-06 1.7E-10 106.3 6.6 36 21-57 6-41 (399)
298 2bry_A NEDD9 interacting prote 98.0 1.8E-05 6.3E-10 103.4 12.0 40 19-59 90-129 (497)
299 4eql_A 4-substituted benzoates 97.9 9.8E-05 3.3E-09 95.8 17.6 62 851-936 382-448 (581)
300 4epl_A Jasmonic acid-amido syn 97.9 0.00047 1.6E-08 89.1 22.5 62 850-935 388-454 (581)
301 2qcu_A Aerobic glycerol-3-phos 97.9 7.5E-05 2.6E-09 98.0 15.6 39 20-59 2-40 (501)
302 2fq1_A Isochorismatase; ENTB, 97.9 7.8E-06 2.7E-10 98.5 5.6 67 1083-1151 217-283 (287)
303 3lad_A Dihydrolipoamide dehydr 97.9 1.6E-05 5.5E-10 103.9 8.8 40 20-60 2-41 (476)
304 1k0i_A P-hydroxybenzoate hydro 97.8 2.5E-05 8.6E-10 99.5 9.9 35 21-56 2-36 (394)
305 3axb_A Putative oxidoreductase 97.8 3.1E-05 1.1E-09 100.4 10.6 39 19-58 21-60 (448)
306 3fpz_A Thiazole biosynthetic e 97.8 6.8E-06 2.3E-10 101.7 3.4 41 21-62 65-107 (326)
307 3ce7_A Specific mitochodrial a 97.8 5.3E-05 1.8E-09 75.9 8.7 77 1078-1155 16-98 (107)
308 2gmh_A Electron transfer flavo 97.8 6E-05 2.1E-09 100.5 11.6 39 21-60 35-79 (584)
309 2q0l_A TRXR, thioredoxin reduc 97.7 2.6E-05 9E-10 95.7 7.0 37 22-60 2-39 (311)
310 3lxd_A FAD-dependent pyridine 97.7 3.3E-05 1.1E-09 99.0 7.9 51 189-242 197-247 (415)
311 2dkh_A 3-hydroxybenzoate hydro 97.7 4.4E-05 1.5E-09 103.1 9.0 38 20-58 31-69 (639)
312 1fl2_A Alkyl hydroperoxide red 97.7 3.2E-05 1.1E-09 94.9 7.0 36 22-60 2-37 (310)
313 3fbs_A Oxidoreductase; structu 97.7 0.00015 5.2E-09 88.0 12.9 35 21-56 2-36 (297)
314 2kci_A Putative acyl carrier p 97.7 4.8E-05 1.7E-09 72.7 6.3 73 1083-1155 4-77 (87)
315 2lki_A Putative uncharacterize 97.7 7.4E-05 2.5E-09 74.5 7.8 73 1081-1153 24-102 (105)
316 3iwa_A FAD-dependent pyridine 97.7 6.4E-05 2.2E-09 98.1 9.6 37 21-58 3-41 (472)
317 1chu_A Protein (L-aspartate ox 97.7 9.4E-05 3.2E-09 97.5 11.2 39 21-61 8-46 (540)
318 2h88_A Succinate dehydrogenase 97.6 9.9E-05 3.4E-09 98.3 11.2 40 20-60 17-56 (621)
319 4gcm_A TRXR, thioredoxin reduc 97.6 2.4E-05 8.3E-10 96.1 4.9 39 21-61 6-44 (312)
320 2ywl_A Thioredoxin reductase r 97.6 9.9E-05 3.4E-09 82.5 9.5 33 22-55 2-34 (180)
321 3fg2_P Putative rubredoxin red 97.6 0.00014 4.6E-09 92.9 11.6 51 189-242 187-237 (404)
322 4fk1_A Putative thioredoxin re 97.6 3E-05 1E-09 94.9 4.9 41 17-59 2-42 (304)
323 3urh_A Dihydrolipoyl dehydroge 97.6 2.7E-05 9.2E-10 102.1 4.5 45 16-61 20-64 (491)
324 2wdq_A Succinate dehydrogenase 97.6 0.00021 7.2E-09 95.2 12.3 38 21-59 7-44 (588)
325 4a5l_A Thioredoxin reductase; 97.5 4.1E-05 1.4E-09 94.1 4.8 37 18-55 1-37 (314)
326 2aqj_A Tryptophan halogenase, 97.5 0.00014 4.9E-09 96.3 10.2 36 20-56 4-42 (538)
327 3ics_A Coenzyme A-disulfide re 97.5 0.00021 7.3E-09 95.8 11.9 39 19-58 34-74 (588)
328 3klj_A NAD(FAD)-dependent dehy 97.5 0.00031 1.1E-08 88.6 12.0 42 16-58 4-45 (385)
329 1yp2_A Glucose-1-phosphate ade 97.5 0.00012 4.2E-09 94.7 8.5 86 1317-1405 330-446 (451)
330 4b63_A L-ornithine N5 monooxyg 97.5 0.00014 4.6E-09 95.3 8.9 38 22-60 40-77 (501)
331 2q7v_A Thioredoxin reductase; 97.4 6E-05 2E-09 93.2 4.7 43 17-61 4-46 (325)
332 1fh1_A NODF, nodulation protei 97.4 1.2E-05 4.2E-10 78.6 -1.3 72 1082-1153 5-87 (92)
333 3l8k_A Dihydrolipoyl dehydroge 97.4 4.7E-05 1.6E-09 99.1 3.4 41 20-61 3-43 (466)
334 2weu_A Tryptophan 5-halogenase 97.4 0.00038 1.3E-08 91.8 12.1 51 188-241 175-225 (511)
335 3cty_A Thioredoxin reductase; 97.4 7E-05 2.4E-09 92.3 4.5 44 16-61 11-54 (319)
336 1mo9_A ORF3; nucleotide bindin 97.4 8.6E-05 2.9E-09 98.0 5.5 47 14-61 36-82 (523)
337 1hyu_A AHPF, alkyl hydroperoxi 97.4 0.00023 8E-09 93.6 9.4 38 20-60 211-248 (521)
338 1pn0_A Phenol 2-monooxygenase; 97.4 0.00019 6.4E-09 97.1 8.6 36 21-57 8-48 (665)
339 3o0h_A Glutathione reductase; 97.4 6.8E-05 2.3E-09 98.1 4.1 39 21-61 26-64 (484)
340 1c0p_A D-amino acid oxidase; a 97.4 0.00012 4E-09 92.1 6.2 39 19-58 4-42 (363)
341 2xdo_A TETX2 protein; tetracyc 97.4 0.00011 3.8E-09 93.5 6.0 41 18-59 23-63 (398)
342 2vdc_G Glutamate synthase [NAD 97.4 0.00012 4E-09 94.4 5.8 41 20-61 121-161 (456)
343 1jnr_A Adenylylsulfate reducta 97.3 0.0014 4.9E-08 88.2 16.3 36 21-57 22-61 (643)
344 2cgq_A Acyl carrier protein AC 97.3 0.00019 6.4E-09 72.3 5.5 71 1079-1154 28-99 (113)
345 4dna_A Probable glutathione re 97.3 0.00011 3.8E-09 95.5 4.2 39 21-61 5-43 (463)
346 3cgb_A Pyridine nucleotide-dis 97.3 0.00092 3.2E-08 87.2 12.9 37 21-58 36-74 (480)
347 1rp0_A ARA6, thiazole biosynth 97.2 0.00015 5.3E-09 87.4 4.8 40 20-60 38-78 (284)
348 3ntd_A FAD-dependent pyridine 97.2 0.00099 3.4E-08 89.0 13.0 36 22-58 2-39 (565)
349 3vrd_B FCCB subunit, flavocyto 97.2 0.001 3.5E-08 84.7 12.5 36 21-56 2-38 (401)
350 1ojt_A Surface protein; redox- 97.2 0.00011 3.8E-09 96.0 3.4 43 18-61 3-45 (482)
351 3brk_X Glucose-1-phosphate ade 97.2 0.00033 1.1E-08 89.7 7.7 71 1573-1660 324-394 (420)
352 2qae_A Lipoamide, dihydrolipoy 97.2 0.00015 5.2E-09 94.4 4.4 40 21-61 2-41 (468)
353 3jsk_A Cypbp37 protein; octame 97.2 0.00019 6.5E-09 87.3 4.8 38 21-59 79-118 (344)
354 1zk7_A HGII, reductase, mercur 97.2 0.00018 6.2E-09 93.7 5.0 42 18-61 1-42 (467)
355 3r9u_A Thioredoxin reductase; 97.2 0.00016 5.5E-09 88.7 4.2 40 20-61 3-43 (315)
356 2r9z_A Glutathione amide reduc 97.2 0.00017 5.8E-09 93.6 4.5 41 19-61 2-42 (463)
357 1dxl_A Dihydrolipoamide dehydr 97.2 0.00019 6.6E-09 93.5 4.9 42 19-61 4-45 (470)
358 3k30_A Histamine dehydrogenase 97.2 0.00023 7.7E-09 97.2 5.7 45 18-63 388-432 (690)
359 2cul_A Glucose-inhibited divis 97.2 0.00025 8.4E-09 82.9 5.2 35 20-55 2-36 (232)
360 3qfa_A Thioredoxin reductase 1 97.2 0.00021 7.2E-09 94.1 5.2 42 19-61 30-79 (519)
361 2a87_A TRXR, TR, thioredoxin r 97.2 0.00021 7E-09 88.7 4.8 43 16-60 9-51 (335)
362 1v59_A Dihydrolipoamide dehydr 97.2 0.00012 3.9E-09 95.8 2.6 42 19-61 3-44 (478)
363 1ges_A Glutathione reductase; 97.1 0.00016 5.4E-09 93.6 3.7 41 19-61 2-42 (450)
364 3ihm_A Styrene monooxygenase A 97.1 0.00022 7.6E-09 91.6 5.1 35 20-55 21-55 (430)
365 1vdc_A NTR, NADPH dependent th 97.1 0.00015 5.1E-09 89.9 2.9 40 20-60 7-50 (333)
366 1zmd_A Dihydrolipoyl dehydroge 97.1 0.00018 6.1E-09 93.9 3.6 41 20-61 5-45 (474)
367 2wpf_A Trypanothione reductase 97.1 0.00016 5.3E-09 94.7 3.0 44 17-61 3-55 (495)
368 1trb_A Thioredoxin reductase; 97.1 0.00017 5.9E-09 88.7 3.2 40 19-60 3-42 (320)
369 2hqm_A GR, grase, glutathione 97.1 0.00019 6.5E-09 93.6 3.8 41 19-61 9-49 (479)
370 2gjc_A Thiazole biosynthetic e 97.1 0.00024 8.1E-09 86.0 4.2 37 22-59 66-104 (326)
371 3dk9_A Grase, GR, glutathione 97.1 0.00018 6.3E-09 93.9 3.5 40 20-61 19-58 (478)
372 3g3e_A D-amino-acid oxidase; F 97.1 0.0002 6.7E-09 89.6 3.5 37 22-59 1-43 (351)
373 2yqu_A 2-oxoglutarate dehydrog 97.0 0.00027 9.1E-09 91.7 4.2 39 22-61 2-40 (455)
374 1o94_A Tmadh, trimethylamine d 97.0 0.00035 1.2E-08 95.7 5.6 44 19-63 387-430 (729)
375 3ic9_A Dihydrolipoamide dehydr 97.0 0.00023 7.8E-09 93.1 3.3 39 21-61 8-46 (492)
376 1lvl_A Dihydrolipoamide dehydr 97.0 0.00027 9.1E-09 91.7 3.4 40 20-61 4-43 (458)
377 3c4a_A Probable tryptophan hyd 97.0 0.00048 1.6E-08 87.1 5.5 35 22-57 1-37 (381)
378 3dgz_A Thioredoxin reductase 2 96.9 0.00038 1.3E-08 91.1 4.3 41 20-61 5-53 (488)
379 1fec_A Trypanothione reductase 96.9 0.00036 1.2E-08 91.2 4.0 40 21-61 3-51 (490)
380 2a8x_A Dihydrolipoyl dehydroge 96.9 0.0003 1E-08 91.4 3.4 39 21-61 3-41 (464)
381 2eq6_A Pyruvate dehydrogenase 96.9 0.00033 1.1E-08 91.0 3.4 39 21-61 6-44 (464)
382 3c4n_A Uncharacterized protein 96.9 0.00046 1.6E-08 88.0 4.3 38 21-59 36-75 (405)
383 1xdi_A RV3303C-LPDA; reductase 96.9 0.00033 1.1E-08 91.9 2.9 39 21-61 2-43 (499)
384 3dgh_A TRXR-1, thioredoxin red 96.8 0.00054 1.8E-08 89.5 4.8 34 19-53 7-40 (483)
385 2rgh_A Alpha-glycerophosphate 96.8 0.00063 2.2E-08 90.4 5.5 38 21-59 32-69 (571)
386 3pl8_A Pyranose 2-oxidase; sub 96.8 0.00061 2.1E-08 91.2 5.1 42 19-61 44-85 (623)
387 1onf_A GR, grase, glutathione 96.8 0.00052 1.8E-08 90.0 4.2 39 21-61 2-40 (500)
388 1ebd_A E3BD, dihydrolipoamide 96.8 0.00048 1.6E-08 89.3 3.8 39 21-61 3-41 (455)
389 2eq6_A Pyruvate dehydrogenase 96.8 0.0037 1.3E-07 81.0 12.2 36 21-57 169-204 (464)
390 1ps9_A 2,4-dienoyl-COA reducta 96.8 0.00087 3E-08 91.2 6.2 42 20-62 372-413 (671)
391 3brk_X Glucose-1-phosphate ade 96.7 0.0014 4.7E-08 83.9 7.2 68 1317-1400 324-391 (420)
392 3kd9_A Coenzyme A disulfide re 96.7 0.00087 3E-08 86.7 5.1 39 20-59 2-42 (449)
393 1lqt_A FPRA; NADP+ derivative, 96.7 0.00063 2.1E-08 87.7 3.4 41 20-61 2-49 (456)
394 3g5s_A Methylenetetrahydrofola 96.7 0.0013 4.5E-08 79.9 5.7 37 22-59 2-38 (443)
395 3oc4_A Oxidoreductase, pyridin 96.6 0.00093 3.2E-08 86.5 4.7 36 22-58 3-40 (452)
396 2bs2_A Quinol-fumarate reducta 96.6 0.00086 2.9E-08 90.0 4.2 38 21-59 5-42 (660)
397 2v3a_A Rubredoxin reductase; a 96.6 0.0049 1.7E-07 77.8 10.8 36 21-57 145-180 (384)
398 2vz8_A Fatty acid synthase; tr 96.5 0.00037 1.3E-08 106.5 0.0 71 1082-1153 2124-2195(2512)
399 3cp8_A TRNA uridine 5-carboxym 96.5 0.0013 4.4E-08 86.5 4.9 41 18-59 18-59 (641)
400 2e5v_A L-aspartate oxidase; ar 96.5 0.0014 4.8E-08 85.0 5.3 36 23-60 1-36 (472)
401 2bc0_A NADH oxidase; flavoprot 96.5 0.0016 5.3E-08 85.2 5.8 38 20-58 34-74 (490)
402 2e4g_A Tryptophan halogenase; 96.5 0.0015 5.3E-08 86.5 5.7 35 20-55 24-61 (550)
403 1gte_A Dihydropyrimidine dehyd 96.5 0.0013 4.6E-08 93.2 5.2 41 21-61 187-227 (1025)
404 1y56_A Hypothetical protein PH 96.5 0.0007 2.4E-08 88.4 1.9 40 21-62 108-147 (493)
405 3h28_A Sulfide-quinone reducta 96.5 0.0013 4.3E-08 84.6 4.2 38 21-59 2-41 (430)
406 2gag_A Heterotetrameric sarcos 96.5 0.0012 4.1E-08 93.0 4.2 41 21-62 128-168 (965)
407 1q1r_A Putidaredoxin reductase 96.5 0.0021 7E-08 82.5 6.0 38 20-57 3-41 (431)
408 2pyx_A Tryptophan halogenase; 96.4 0.0018 6.2E-08 85.5 5.5 51 188-241 177-228 (526)
409 1cjc_A Protein (adrenodoxin re 96.4 0.0018 6.3E-08 83.5 4.8 40 21-61 6-47 (460)
410 2zxi_A TRNA uridine 5-carboxym 96.4 0.002 7E-08 84.3 5.2 39 20-59 26-65 (637)
411 3h8l_A NADH oxidase; membrane 96.4 0.0014 4.7E-08 83.7 3.6 37 22-59 2-41 (409)
412 4b1b_A TRXR, thioredoxin reduc 96.4 0.0016 5.4E-08 85.3 4.1 40 21-61 42-89 (542)
413 3ces_A MNMG, tRNA uridine 5-ca 96.3 0.002 6.7E-08 84.8 4.9 38 20-58 27-65 (651)
414 3ef6_A Toluene 1,2-dioxygenase 96.3 0.0025 8.7E-08 81.1 5.7 38 22-59 3-41 (410)
415 1kf6_A Fumarate reductase flav 96.3 0.0016 5.4E-08 86.9 3.8 38 21-59 5-44 (602)
416 1ges_A Glutathione reductase; 96.3 0.0086 2.9E-07 77.2 10.5 36 21-57 167-202 (450)
417 1m6i_A Programmed cell death p 96.3 0.0019 6.6E-08 84.3 4.4 42 16-58 6-49 (493)
418 2v3a_A Rubredoxin reductase; a 96.2 0.0026 8.9E-08 80.4 5.1 37 19-55 2-39 (384)
419 2gqw_A Ferredoxin reductase; f 96.2 0.0027 9.3E-08 80.8 5.2 39 20-58 6-45 (408)
420 1v59_A Dihydrolipoamide dehydr 96.2 0.011 3.7E-07 77.0 10.9 37 21-58 183-219 (478)
421 3gyx_A Adenylylsulfate reducta 96.2 0.0024 8.3E-08 85.5 4.5 38 21-59 22-65 (662)
422 2x8g_A Thioredoxin glutathione 96.2 0.0029 1E-07 84.9 5.2 35 19-54 105-139 (598)
423 1nhp_A NADH peroxidase; oxidor 96.1 0.012 3.9E-07 76.0 10.6 38 20-58 148-185 (447)
424 2yqu_A 2-oxoglutarate dehydrog 96.1 0.013 4.3E-07 75.8 10.8 36 21-57 167-202 (455)
425 3sx6_A Sulfide-quinone reducta 96.1 0.0027 9.4E-08 81.6 4.4 35 21-56 4-41 (437)
426 1nhp_A NADH peroxidase; oxidor 96.1 0.0031 1.1E-07 81.4 4.8 36 22-58 1-38 (447)
427 2cdu_A NADPH oxidase; flavoenz 96.1 0.0033 1.1E-07 81.3 5.0 36 22-58 1-38 (452)
428 2qae_A Lipoamide, dihydrolipoy 96.1 0.02 6.9E-07 74.2 12.5 36 21-57 174-209 (468)
429 3ic9_A Dihydrolipoamide dehydr 96.1 0.021 7E-07 74.5 12.4 36 21-57 174-209 (492)
430 1ebd_A E3BD, dihydrolipoamide 96.0 0.016 5.6E-07 74.8 11.4 36 21-57 170-205 (455)
431 1zmd_A Dihydrolipoyl dehydroge 95.9 0.028 9.5E-07 73.0 12.6 36 21-57 178-213 (474)
432 2r9z_A Glutathione amide reduc 95.7 0.038 1.3E-06 71.4 12.8 36 21-57 166-201 (463)
433 3ef6_A Toluene 1,2-dioxygenase 95.7 0.017 5.7E-07 73.6 9.1 37 20-57 142-178 (410)
434 4g6h_A Rotenone-insensitive NA 95.7 0.0051 1.8E-07 80.2 4.4 41 15-56 36-76 (502)
435 4eqs_A Coenzyme A disulfide re 95.7 0.0055 1.9E-07 78.6 4.6 37 22-58 1-38 (437)
436 3urh_A Dihydrolipoyl dehydroge 95.7 0.031 1.1E-06 72.9 11.8 36 21-57 198-233 (491)
437 1xhc_A NADH oxidase /nitrite r 95.7 0.0058 2E-07 76.5 4.5 35 21-57 8-42 (367)
438 3s5w_A L-ornithine 5-monooxyge 95.6 0.032 1.1E-06 72.2 11.5 44 199-242 329-373 (463)
439 2q0l_A TRXR, thioredoxin reduc 95.6 0.049 1.7E-06 66.2 12.5 36 21-57 143-178 (311)
440 3hyw_A Sulfide-quinone reducta 95.6 0.0059 2E-07 78.2 4.2 34 22-56 3-38 (430)
441 1kdg_A CDH, cellobiose dehydro 95.5 0.0079 2.7E-07 79.7 5.1 36 20-56 6-41 (546)
442 1dxl_A Dihydrolipoamide dehydr 95.5 0.023 7.9E-07 73.7 9.3 36 21-57 177-212 (470)
443 2hqm_A GR, grase, glutathione 95.4 0.041 1.4E-06 71.5 11.1 36 21-57 185-220 (479)
444 1fec_A Trypanothione reductase 95.3 0.044 1.5E-06 71.3 11.3 36 21-57 187-225 (490)
445 1xdi_A RV3303C-LPDA; reductase 95.3 0.048 1.6E-06 71.2 11.5 36 21-57 182-217 (499)
446 2a8x_A Dihydrolipoyl dehydroge 95.3 0.049 1.7E-06 70.5 11.4 36 21-57 171-206 (464)
447 1q1r_A Putidaredoxin reductase 95.3 0.037 1.3E-06 70.8 10.1 37 20-57 148-184 (431)
448 1lvl_A Dihydrolipoamide dehydr 95.2 0.02 6.9E-07 73.9 7.6 36 21-57 171-206 (458)
449 1onf_A GR, grase, glutathione 95.2 0.058 2E-06 70.4 12.0 36 21-57 176-211 (500)
450 3itj_A Thioredoxin reductase 1 95.2 0.067 2.3E-06 65.7 12.0 36 20-56 172-207 (338)
451 2gqw_A Ferredoxin reductase; f 95.2 0.055 1.9E-06 68.7 11.1 37 20-57 144-180 (408)
452 3iwa_A FAD-dependent pyridine 95.1 0.053 1.8E-06 70.3 11.2 36 21-57 159-195 (472)
453 3o0h_A Glutathione reductase; 95.1 0.053 1.8E-06 70.6 10.9 36 21-57 191-226 (484)
454 3q9t_A Choline dehydrogenase a 95.1 0.012 4.2E-07 77.5 4.7 37 20-56 5-41 (577)
455 1trb_A Thioredoxin reductase; 95.0 0.089 3.1E-06 64.1 12.3 35 21-56 145-179 (320)
456 2wpf_A Trypanothione reductase 95.0 0.063 2.2E-06 69.9 11.3 36 21-57 191-229 (495)
457 3r9u_A Thioredoxin reductase; 95.0 0.079 2.7E-06 64.4 11.6 36 21-57 147-182 (315)
458 1ju2_A HydroxynitrIle lyase; f 95.0 0.0074 2.5E-07 79.4 2.5 37 20-58 25-61 (536)
459 1n4w_A CHOD, cholesterol oxida 94.9 0.014 4.9E-07 76.2 5.0 38 20-58 4-41 (504)
460 3cgb_A Pyridine nucleotide-dis 94.9 0.059 2E-06 70.0 10.7 37 20-57 185-221 (480)
461 3oc4_A Oxidoreductase, pyridin 94.9 0.072 2.5E-06 68.6 11.5 36 21-57 147-182 (452)
462 3t37_A Probable dehydrogenase; 94.9 0.013 4.4E-07 77.4 4.3 36 20-56 16-52 (526)
463 1fl2_A Alkyl hydroperoxide red 94.8 0.09 3.1E-06 63.8 11.5 35 21-56 144-178 (310)
464 1mo9_A ORF3; nucleotide bindin 94.8 0.067 2.3E-06 70.2 11.0 35 22-57 215-249 (523)
465 2cdu_A NADPH oxidase; flavoenz 94.7 0.12 4.2E-06 66.4 13.0 36 21-57 149-184 (452)
466 3l8k_A Dihydrolipoyl dehydroge 94.6 0.092 3.1E-06 67.9 11.3 36 21-57 172-207 (466)
467 2bc0_A NADH oxidase; flavoprot 94.6 0.079 2.7E-06 69.0 10.6 37 20-57 193-229 (490)
468 3dk9_A Grase, GR, glutathione 94.6 0.12 4E-06 67.2 12.1 36 21-57 187-222 (478)
469 3ab1_A Ferredoxin--NADP reduct 94.5 0.077 2.6E-06 66.0 10.0 35 21-56 163-197 (360)
470 2q7v_A Thioredoxin reductase; 94.5 0.13 4.6E-06 62.8 11.9 35 21-56 152-186 (325)
471 1coy_A Cholesterol oxidase; ox 94.4 0.023 7.9E-07 74.3 5.0 38 19-57 9-46 (507)
472 1vdc_A NTR, NADPH dependent th 94.4 0.15 5.2E-06 62.4 12.2 36 20-56 158-193 (333)
473 4dna_A Probable glutathione re 94.4 0.12 4.2E-06 66.6 11.7 35 21-56 170-204 (463)
474 3ntd_A FAD-dependent pyridine 94.3 0.14 4.8E-06 68.0 12.2 36 21-57 151-186 (565)
475 1ojt_A Surface protein; redox- 94.2 0.057 2E-06 70.2 7.9 36 21-57 185-220 (482)
476 4b1b_A TRXR, thioredoxin reduc 94.1 0.19 6.4E-06 65.8 12.4 34 21-55 223-256 (542)
477 1zk7_A HGII, reductase, mercur 93.9 0.2 6.7E-06 64.8 12.1 36 21-57 176-211 (467)
478 3qvp_A Glucose oxidase; oxidor 93.8 0.032 1.1E-06 73.6 4.3 35 20-55 18-53 (583)
479 2hfk_A Pikromycin, type I poly 93.7 0.004 1.4E-07 76.4 -4.1 52 1076-1149 23-74 (319)
480 2px6_A Thioesterase domain; th 93.7 0.006 2.1E-07 74.7 -2.6 37 1111-1147 1-37 (316)
481 1gpe_A Protein (glucose oxidas 93.7 0.037 1.3E-06 73.5 4.8 37 20-57 23-60 (587)
482 2jbv_A Choline oxidase; alcoho 93.6 0.036 1.2E-06 73.0 4.5 38 20-58 12-50 (546)
483 3dgh_A TRXR-1, thioredoxin red 93.6 0.33 1.1E-05 62.9 13.5 33 21-54 187-219 (483)
484 3fim_B ARYL-alcohol oxidase; A 93.5 0.03 1E-06 73.7 3.3 36 21-57 2-38 (566)
485 3dgz_A Thioredoxin reductase 2 93.5 0.34 1.2E-05 62.9 13.4 33 21-54 185-217 (488)
486 1m6i_A Programmed cell death p 93.5 0.2 6.8E-06 65.2 11.1 43 196-242 236-278 (493)
487 3ics_A Coenzyme A-disulfide re 93.3 0.19 6.7E-06 67.0 10.8 36 21-57 187-222 (588)
488 3cty_A Thioredoxin reductase; 92.9 0.36 1.2E-05 58.7 11.5 35 21-56 155-189 (319)
489 3f8d_A Thioredoxin reductase ( 92.8 0.39 1.3E-05 58.3 11.7 37 20-57 153-189 (323)
490 2zbw_A Thioredoxin reductase; 92.7 0.42 1.4E-05 58.5 12.0 35 21-56 152-186 (335)
491 3qfa_A Thioredoxin reductase 1 92.7 0.42 1.4E-05 62.5 12.6 33 21-54 210-242 (519)
492 2x8g_A Thioredoxin glutathione 91.8 0.75 2.6E-05 61.4 13.6 33 21-54 286-318 (598)
493 3lzw_A Ferredoxin--NADP reduct 90.9 0.87 3E-05 55.4 11.9 35 21-56 154-188 (332)
494 2e1m_B L-glutamate oxidase; L- 90.7 0.059 2E-06 55.4 0.8 45 231-275 4-48 (130)
495 4gcm_A TRXR, thioredoxin reduc 90.4 0.19 6.4E-06 61.0 5.1 36 21-57 145-180 (312)
496 3fwz_A Inner membrane protein 90.3 0.31 1.1E-05 51.3 6.1 35 20-55 6-40 (140)
497 3klj_A NAD(FAD)-dependent dehy 89.9 0.19 6.6E-06 62.9 4.8 37 21-58 146-182 (385)
498 1lss_A TRK system potassium up 89.2 0.32 1.1E-05 50.9 5.1 34 21-55 4-37 (140)
499 3k30_A Histamine dehydrogenase 89.0 0.67 2.3E-05 62.9 9.4 40 18-58 520-561 (690)
500 2g1u_A Hypothetical protein TM 89.0 0.36 1.2E-05 51.8 5.3 34 21-55 19-52 (155)
No 1
>4dg8_A PA1221; ANL superfamily, adenylation domain, peptidyl carrier protei ribosomal peptide synthetase, NRPS, valine adenylation, LIG; HET: AMP; 2.15A {Pseudomonas aeruginosa} PDB: 4dg9_A*
Probab=100.00 E-value=8e-80 Score=833.17 Aligned_cols=572 Identities=14% Similarity=0.152 Sum_probs=386.7
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
.+...++.+++++++++. |+++|+.+.+ +++||+||+++++++|++|+++ |+++||+|+++++|+++++
T Consensus 23 ~~~~~tl~~~~~~~a~~~--Pd~~Av~~~~------~~lTY~eL~~~a~~lA~~L~~~---Gv~~g~~V~i~~~~s~~~v 91 (620)
T 4dg8_A 23 LYAHPTVVARFSEMAALH--PHREAIRDRF------GSVDYRQLLDSAEQLSDYLLEH---YPQPGVCLGVYGEYSRESI 91 (620)
T ss_dssp GGGSCCHHHHHHHHHHHC--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHH---CCSSCCEEEEESSSCHHHH
T ss_pred CCCCCCHHHHHHHHHHhC--CCCeEEEcCC------CcCcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHH
Confidence 344678999999998874 8999998643 5899999999999999999999 9999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccc
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAE 624 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 624 (2280)
+++|||+|+|++|||+|+.+|.++ +.++++++++++++++....... ........... ....
T Consensus 92 va~lailkaGa~~vpld~~~p~~~-------l~~il~~~~~~~vl~~~~~~~~~-----~~~~~~~~~~~------~~~~ 153 (620)
T 4dg8_A 92 TCLLAILLSGHHYLYIDLKQPAAW-------NAELCRQVDCRLILDCSTTPTPA-----NGLPCVPVRHL------PAAP 153 (620)
T ss_dssp HHHHHHHHTTCEEEECCTTSCHHH-------HHHHHHHHTEEEEEECCSSCCCC-----TTSCEEEGGGC------CCCC
T ss_pred HHHHHHHHhCCEEEeeCccChHHH-------HHHHHHhCCCcEEEecCcccccc-----cCCceeeeccC------CcCC
Confidence 999999999999999999999998 88999999999999764332111 11111111100 0001
Q ss_pred cccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccce
Q 037878 625 NVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGST 704 (2280)
Q Consensus 625 ~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~ 704 (2280)
.........++|+|||+|||||||+||||+++|+++.+.+.. ...+++.+++++++++|++|++++ .+++.+|+.|++
T Consensus 154 ~~~~~~~~~~~d~a~iiyTSGSTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~ 231 (620)
T 4dg8_A 154 ASVARPCFAADQIAYINFSSGTTGRPKAIACTHAGITRLCLG-QSFLAFAPQMRFLVNSPLSFDAAT-LEIWGALLNGGC 231 (620)
T ss_dssp CCSSCCCCCTTSEEEEEEEBSSSSSCEEEEEEHHHHHHHHSS-CGGGTTCTTCEEEECSCTTSTHHH-HHHHHHHTTTCE
T ss_pred ccccCCCCCCCCeEEEEECCCccccCeEEEEchHHHHHHHHH-HHhhCCCCCCEEEEECccCHHHHH-HHHHHHHhcCCE
Confidence 111223356899999999999999999999999999887765 456788999999999999999997 468999999999
Q ss_pred EEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhc
Q 037878 705 AILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTR 784 (2280)
Q Consensus 705 ~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~ 784 (2280)
+++.+...+ +|..+.+.++++++|++..+|+++..+.+.. ..++++||.+++|||++++++++++.+.+
T Consensus 232 ~v~~~~~~~--~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~--------~~~l~~lr~v~~gGe~l~~~~~~~~~~~~- 300 (620)
T 4dg8_A 232 CVLNDLGPL--DPGVLRQLIGERGADSAWLTASLFNTLVDLD--------PDCLGGLRQLLTGGDILSVPHVRRALLRH- 300 (620)
T ss_dssp EEECCSSSC--CHHHHHHHHHTTCCCEEEEEHHHHHHHHHHC--------GGGGTTCSEEEEESSCCCHHHHHHHHHHC-
T ss_pred EEeCccccC--CHHHHHHHHHHhCCcEEEccHHHHHHHHhcC--------hhhCCCccEEEEEeCcCCHHHHHHHHHhC-
Confidence 998754433 9999999999999999999999999887531 14578999999999999999999998864
Q ss_pred CCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCC
Q 037878 785 PFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPS 864 (2280)
Q Consensus 785 ~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~ 864 (2280)
++++++|.||+||+++++++........ ....+++|+|++|++++|+|+++. +++|+|++|||||+|++
T Consensus 301 ----~~~~l~n~YG~TE~~~~~~~~~~~~~~~------~~~~~~iG~p~~~~~~~i~d~~~~-~~~~~g~~GEl~i~G~~ 369 (620)
T 4dg8_A 301 ----PRLHLVNGYGPTENTTFTCCHVVTDDDL------EEDDIPIGKAIAGTAVLLLDEHGQ-EIAEPDRAGEIVAFGAG 369 (620)
T ss_dssp ----TTCEEEEEECCGGGCSCSEEEECCTGGG------GSSSCCCBEECTTEEEEEECTTSC-BCCSSSCCEEEEEEETT
T ss_pred ----CCeEEEeeEchhhhhhheEEEecccccc------CCCCCCceecccCcEEEEECccCC-CCCCCCCceEEEEeccc
Confidence 5788999999999998776543222111 112357899999999999998764 55689999999999999
Q ss_pred cccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCce
Q 037878 865 AGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGC 943 (2280)
Q Consensus 865 v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~ 943 (2280)
+++||||+|++|+++|.+++....+.+||||||+|+++ ||.|+|+||+|||||++|+||+|+|||++|.+||+|.+
T Consensus 370 v~~GY~~~p~~t~~~f~~~p~~~~~~~~yrTGDl~~~~~dG~l~~~GR~dd~Ik~~G~ri~~~eIE~~l~~~p~V~~--- 446 (620)
T 4dg8_A 370 LAQGYRNDAARTRASFVELPYRGRLLRAYRTGDRARYDEQGRLRFIGRGDGQVKLNGYRLDLPALEQRFRRQPGILD--- 446 (620)
T ss_dssp CCSEETTCHHHHHHHEEEEEETTEEEEEEEEEEEEEECTTSCEEEEECSSSEEEETTEEEEHHHHHHHHHTSTTEEE---
T ss_pred cccccCCChhhhhhhhccCCCCCCCceEEeCCCEEEECCCCeEEEEccCCCEEEECCEEcCHHHHHHHHHhCCCccE---
Confidence 99999999999999998766433333899999999997 99999999999999999999999999999999999975
Q ss_pred eEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccch
Q 037878 944 CAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKR 1023 (2280)
Q Consensus 944 aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR 1023 (2280)
|+|++.+++.. ..+++..... .. ++.+.++++|+. |++| ..++.+++||+|+||||||
T Consensus 447 a~Vv~~~~~~~-------------~~lv~~~~~~-~~----~~~~~l~~~Lp~-y~~P---~~~~~v~~lP~t~~GKidR 504 (620)
T 4dg8_A 447 CALLVRERNGV-------------KQLLCAWTGK-AD----ASPQALLRQLPT-WQRP---HACVRVEALPLTAHGKLDR 504 (620)
T ss_dssp EEEEEEEETTE-------------EEEEEEEEEC-TT----CCCHHHHHHSCG-GGSC---SEEEECSSCCCC----CCH
T ss_pred EEEEEEeCCCc-------------eEEEEEEecC-hH----HHHHHHHHhChh-hcCC---cEEEEECcCCCCcccCHhH
Confidence 78887654321 1122222211 11 123455555553 5544 4455669999999999999
Q ss_pred HHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCCCccccC
Q 037878 1024 FECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIPITKVSA 1103 (2280)
Q Consensus 1024 ~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~~~~i~~ 1103 (2280)
++|++.+.+.... ...+.+++|+.|+++|+++||++ .++.
T Consensus 505 ~~L~~~~~~~~~~--------------------------------------~~~~~~~~e~~l~~iw~~vL~~~--~~~~ 544 (620)
T 4dg8_A 505 AALLRRLEEPLER--------------------------------------CASALDPDQRGCAQLWSELLGCE--VGAA 544 (620)
T ss_dssp HHHHHHTCSCC---------------------------------------------------------------------
T ss_pred HHHhhcccccccc--------------------------------------ccCCCCHHHHHHHHHHHHHhCCC--CCCC
Confidence 9998875322100 01134667889999999999996 7899
Q ss_pred CCChhhcccchHHHHHHHHHHHH-HhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1104 TDSLVSYGIDSIGVVRAAQKLSD-FLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1104 ~~~Ff~lGGdSL~a~~l~~~l~~-~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
+||||++|||||+||||++++++ .+|+++++++||+||||++||+++++..
T Consensus 545 ~d~Ff~lGGdSl~a~~l~~~l~~~~~~~~l~~~~~f~~pti~~la~~l~~~~ 596 (620)
T 4dg8_A 545 DQDFFLCGGNSLLALQLVALCQSAGAGANLGLADLQANSRLDQFSRLLRSHG 596 (620)
T ss_dssp ----------------------------------------------------
T ss_pred CCChhhccCcHHHHHHHHHHHHhhCCCCCcCHHHHhcCCCHHHHHHHHHhcC
Confidence 99999999999999999999998 7999999999999999999999998644
No 2
>2vsq_A Surfactin synthetase subunit 3; ligase, peptidyl carrier protein, ligase phosphoprotein, TER module, phosphopantetheine; 2.60A {Bacillus subtilis}
Probab=100.00 E-value=2.2e-75 Score=855.54 Aligned_cols=579 Identities=20% Similarity=0.264 Sum_probs=463.7
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.++++.++++. |+++|+.+.+ +++||+||+++++++|++|+++ |+++||+|+|+++||+++++++
T Consensus 463 ~~~l~~~~~~~~~~~--p~~~Av~~~~------~~lTY~eL~~~a~~lA~~L~~~---Gv~~g~~V~i~~~~s~~~vv~~ 531 (1304)
T 2vsq_A 463 TKPLTYWFKEAVNAN--PDAPALTYSG------QTLSYRELDEEANRIARRLQKH---GAGKGSVVALYTKRSLELVIGI 531 (1304)
T ss_dssp CCCHHHHHHHHHHHC--TTSEEEESSS------CEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEECCCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHhC--CCCeEEEECC------eeEcHHHHHHHHHHHHHHHHhc---CcCCcCEEEEEeCCCHHHHHHH
Confidence 368999999988874 8999997532 5899999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCC-ccccccccccccccccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLP-WLHTDSWVKNSKNLLAENV 626 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 626 (2280)
|||+|+|++|||+||.+|.+| +.++++++++++++++......... .+... .+..++. ........
T Consensus 532 lailkaG~~~vpldp~~p~~r-------l~~il~~~~~~~vl~~~~~~~~~~~--~~~~~~~~~~~~~----~~~~~~~~ 598 (1304)
T 2vsq_A 532 LGVLKAGAAYLPVDPKLPEDR-------ISYMLADSAAACLLTHQEMKEQAAE--LPYTGTTLFIDDQ----TRFEEQAS 598 (1304)
T ss_dssp HHHHHTTCEEEECCTTSCHHH-------HHHHHHHHTCCEEEECSTTCTTSTT--CCCCSEEEESSCG----GGGGSCSS
T ss_pred HHHHHHCCEEEEECCCCHHHH-------HHHHHHHcCCCEEEECcchhhhhhc--cCCCCcEEEeccc----cccccccC
Confidence 999999999999999999999 8899999999999998765433211 11111 1111110 00001111
Q ss_pred cccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEE
Q 037878 627 VCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAI 706 (2280)
Q Consensus 627 ~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~v 706 (2280)
.......++|+|||+|||||||+||||+++|+++.+. .+....+++++++++++++|++|+.+. .+++.+|..|++++
T Consensus 599 ~~~~~~~~~~~ayiiyTSGSTG~PKgV~~~h~~l~~~-~~~~~~~~~~~~d~~l~~~~~~fd~~~-~~~~~~l~~G~~l~ 676 (1304)
T 2vsq_A 599 DPATAIDPNDPAYIMYTSGTTGKPKGNITTHANIQGL-VKHVDYMAFSDQDTFLSVSNYAFDAFT-FDFYASMLNAARLI 676 (1304)
T ss_dssp CCCCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHH-HSSCCSSCCCTTCEEEECSCTTSTHHH-HHHHHHHTTTCEEE
T ss_pred CCCCCCCCCCeEEEEeCCCCCCCCCEEEEehHHHHHH-HHHHHhcCCCCCCEEEEECCccHHHHH-HHHHHHHHcCCEEE
Confidence 1223457899999999999999999999999999876 444556788899999999999999986 57899999999999
Q ss_pred EeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCC
Q 037878 707 LFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPF 786 (2280)
Q Consensus 707 l~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~ 786 (2280)
+.++.. ..+|..+.+.++++++|++..+|++++.+.+.. ...+++||.+++|||+++++++++|.+.+
T Consensus 677 ~~~~~~-~~~~~~l~~~i~~~~vt~~~~~p~~~~~l~~~~--------~~~~~~lr~~~~gGe~l~~~~~~~~~~~~--- 744 (1304)
T 2vsq_A 677 IADEHT-LLDTERLTDLILQENVNVMFATTALFNLLTDAG--------EDWMKGLRCILFGGERASVPHVRKALRIM--- 744 (1304)
T ss_dssp ECCGGG-TTCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHC--------SHHHHTCSEEEEESSCCCHHHHHHHHHHH---
T ss_pred ECChhh-cCCHHHHHHHHHHcCCcEEEccHHHHHHHHhhc--------hhcCCCccEEEEecCCCCHHHHHHHHHhC---
Confidence 987643 459999999999999999999999999886531 12357899999999999999999999876
Q ss_pred CCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcc
Q 037878 787 GLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAG 866 (2280)
Q Consensus 787 g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~ 866 (2280)
++++++|.||+||++++++.......+ ......++|+|++|++++|+|+++ .++|.|++|||||+|++++
T Consensus 745 --~~~~l~n~YG~TE~~~~~~~~~~~~~~------~~~~~~~iG~p~~~~~~~i~d~~~--~~~p~G~~GEl~i~G~~v~ 814 (1304)
T 2vsq_A 745 --GPGKLINCYGPTEGTVFATAHVVHDLP------DSISSLPIGKPISNASVYILNEQS--QLQPFGAVGELCISGMGVS 814 (1304)
T ss_dssp --CTTCEEEEECCGGGSSCSEEEECCCCC------SSCSSCCCBEECTTEEEEEECTTS--CBCCTTCCEEEEEEETTCC
T ss_pred --CCCEEEEeEChhHHhHHheeeeccCcc------ccCCCCCCceeeCCCEEEEECCCc--CCCCCCCceEEEEeccccC
Confidence 356899999999999887764322111 111235689999999999999875 5668999999999999999
Q ss_pred cccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeE
Q 037878 867 IGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCA 945 (2280)
Q Consensus 867 ~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aa 945 (2280)
+||+|+|++|+++|+.+|+. ++++||||||+|+++ ||.|+|+||+|||||++|+||||+|||++|.+||+|.+ |+
T Consensus 815 ~GY~~~p~~T~~~f~~~p~~-~g~~~yrTGDl~~~~~dG~l~~~GR~d~qvki~G~rie~~eIE~~l~~~p~V~~---a~ 890 (1304)
T 2vsq_A 815 KGYVNRADLTKEKFIENPFK-PGETLYRTGDLARWLPDGTIEYAGRIDDQVKIRGHRIELEEIEKQLQEYPGVKD---AV 890 (1304)
T ss_dssp CCBTTCHHHHHHHEEECTTS-TTCEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHHHSSSCCE---EE
T ss_pred ccccCCcccchhhhccCCCC-CCCeeEecCCeEEEcCCCeEEEEcCCCCEEEECCEeeCHHHHHHHHHhCCCCce---EE
Confidence 99999999999999887653 567999999999997 99999999999999999999999999999999999975 77
Q ss_pred EEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHH
Q 037878 946 VIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFE 1025 (2280)
Q Consensus 946 Vv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~ 1025 (2280)
|++.+++.. +...+++++ ... ....+++++.++++|+. ||+|. .++.+++||+|+||||||++
T Consensus 891 V~~~~~~~~---------~~~l~a~vv---~~~-~~~~~~l~~~l~~~Lp~-ymvP~---~~~~l~~lP~t~~GKidR~~ 953 (1304)
T 2vsq_A 891 VVADRHESG---------DASINAYLV---NRT-QLSAEDVKAHLKKQLPA-YMVPQ---TFTFLDELPLTTNGKVNKRL 953 (1304)
T ss_dssp EEEECCSSS---------CCEEEEEEE---CSS-SSCHHHHHHHHHHHSCG-GGSCS---EEEEESCCCCCSSCSSCCSC
T ss_pred EEEEecCCC---------CEEEEEEEe---CCC-CCCHHHHHHHHHHhChH-hhhcc---EEEEecccCCCCCcccCHhh
Confidence 887654321 112233332 222 22335566666666554 45554 44455999999999999975
Q ss_pred HHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCCCccccCCC
Q 037878 1026 CLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIPITKVSATD 1105 (2280)
Q Consensus 1026 L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~~~~i~~~~ 1105 (2280)
|+.|..... . .....+.+++|+.|+++|+++||++ .|+.+|
T Consensus 954 ------------L~~~~~~~~----------~---------------~~~~~p~~~~e~~l~~~~~~vL~~~--~i~~~~ 994 (1304)
T 2vsq_A 954 ------------LPKPDQDQL----------A---------------EEWIGPRNEMEETIAQIWSEVLGRK--QIGIHD 994 (1304)
T ss_dssp ------------CCCCCGGGG----------C---------------CCCCCCSSHHHHHHHHHHHHHHTCS--CCCTTC
T ss_pred ------------cCCcchhhh----------c---------------ccccCCCChHHHHHHHHHHHHcCCC--ccCCCC
Confidence 554421100 0 0012346789999999999999986 899999
Q ss_pred ChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1106 SLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1106 ~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
|||++|||||+|++++++|++.+|+++++.++|++||+++||++++...
T Consensus 995 ~ff~lGg~Sl~a~~l~~~l~~~~g~~l~~~~~~~~~ti~~la~~~~~~~ 1043 (1304)
T 2vsq_A 995 DFFALGGHALKAMTAASRIKKELGIDLPVKLLFEAPTIAGISAYLKNGG 1043 (1304)
T ss_dssp CTTTTTCCHHHHHHHHHHSSSTTSCCCCSSCTTTCCSHHHHHHHHHHTT
T ss_pred CHHHhCCChHHHHHHHHHHHHHhCCCCCHHHHHhCCCHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999997643
No 3
>3rg2_A Enterobactin synthase component E (ENTE), 2,3-DIH dihydroxybenzoate synthetase, isochroismatase...; adenylate-forming enzymes, ANL superfamily; HET: SVS PNS; 3.10A {Escherichia coli}
Probab=100.00 E-value=2e-74 Score=784.81 Aligned_cols=578 Identities=17% Similarity=0.206 Sum_probs=454.2
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
++...++.++++++++ ||++|+.+.+ +++||+||+++++++|++|+++ |+++||+|+++++|+++++
T Consensus 23 ~~~~~~l~~~~~~~a~----pd~~Av~~~~------~~lTY~eL~~~a~~lA~~L~~~---Gv~~gd~V~l~~~~s~~~v 89 (617)
T 3rg2_A 23 YWQDLPLTDILTRHAA----SDSIAVIDGE------RQLSYRELNQAADNLACSLRRQ---GIKPGETALVQLGNVAELY 89 (617)
T ss_dssp SCCCCCTTHHHHTTTT----CCSEEEEETT------EEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSHHHH
T ss_pred CCCcCCHHHHHHHhhC----CCCeEEecCC------ceEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCcHHHH
Confidence 3445678899988876 6999997532 5899999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhh-----c--cCCCCCCCccccccccc-
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAV-----R--VGSWPNLPWLHTDSWVK- 616 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~-----~--~~~~~~~~~~~~~~~~~- 616 (2280)
+++|||+++|+++||+++.+|.++ +.++++++++++++++....... . ....+....+.......
T Consensus 90 va~lA~l~aG~~~vpl~~~~~~~~-------l~~~l~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 162 (617)
T 3rg2_A 90 ITFFALLKLGVAPVLALFSHQRSE-------LNAYASQIEPALLIADRQHALFSGDDFLNTFVTEHSSIRVVQLLNDSGE 162 (617)
T ss_dssp HHHHHHHHHTCEEEEECTTCCHHH-------HHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHHSTTCCEEEEETCCST
T ss_pred HHHHHHHhcCeEEccCCccccHHH-------HHHHHhhcCceEEEecccccccccHHHHHHHhhcCCccceeeecccccc
Confidence 999999999999999999999998 88999999999999986543100 0 00001111111100000
Q ss_pred -cccc--cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH
Q 037878 617 -NSKN--LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 617 -~~~~--~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
.... ..........+..++|+|||+|||||||+||||+++|+++++.+......+++.+++++++++|++|.+++..
T Consensus 163 ~~~~~~~~~~~~~~~~~~~~~~~~a~ii~TSGSTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~~~~~ 242 (617)
T 3rg2_A 163 HNLQDAINHPAEDFTATPSPADEVAYFQLSGGTTGTPKLIPRTHNDYYYSVRRSVEICQFTQQTRYLCAIPAAHNYAMSS 242 (617)
T ss_dssp TBHHHHHHSCCSSCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHS
T ss_pred cchhhhhcccccccCCCCCCCCCeEEEEECCCcCCCCCEeehhHHHHHHHHHHHHHhcCCCCcceEEEeccchhhhhhhH
Confidence 0000 0011111233456799999999999999999999999999999999999999999999999999999988754
Q ss_pred -HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCC
Q 037878 694 -GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVR 772 (2280)
Q Consensus 694 -~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~ 772 (2280)
+++.+++.|+++++.+. .++..+++.++++++|++..+|+++..+++....... ..++++||.+++|||+++
T Consensus 243 ~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~---~~~l~~lr~i~~gGe~l~ 315 (617)
T 3rg2_A 243 PGSLGVFLAGGTVVLAAD----PSATLCFPLIEKHQVNVTALVPPAVSLWLQALIEGES---RAQLASLKLLQVGGARLS 315 (617)
T ss_dssp SHHHHHHHHTCEEEECSS----CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHTTCC---TTTTTTCCEEEEESSCCC
T ss_pred HHHHHHHHcCCEEEEeCC----CCHHHHHHHHHHhCCcEEEcchHHHHHHHHhhhcccc---cccCCCccEEEEcCCcCC
Confidence 68999999999998764 3889999999999999999999999998876654321 246889999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCC-CCceEEEEcCCCCcccCC
Q 037878 773 QTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQND-PDVDIRIVNPETSEEIGE 851 (2280)
Q Consensus 773 ~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~-pg~~v~Ivd~~~~~~~~p 851 (2280)
+++.++|.+.+ +++++|.||+||+++.++...... ....+++|.|+ ++.+++|+|+++ .++|
T Consensus 316 ~~~~~~~~~~~------~~~~~~~YG~tE~~~~~~~~~~~~---------~~~~~~~G~p~~~~~~~~i~d~~~--~~~p 378 (617)
T 3rg2_A 316 ATLAARIPAEI------GCQLQQVFGMAEGLVNYTRLDDSA---------EKIIHTQGYPMCPDDEVWVADAEG--NPLP 378 (617)
T ss_dssp HHHHHHHHHHT------CSEEEEEEEETTEEEEECCTTSCH---------HHHHHCCCEESCTTCEEEEECTTS--CBCC
T ss_pred HHHHHHHHHHh------CCcEEEEeccCcceeecccCCCcc---------cccccCCCccCCCCceEEEECCCC--CCCC
Confidence 99999998874 578999999999986554321110 11235678887 788999999775 4568
Q ss_pred CCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHH
Q 037878 852 PGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEK 930 (2280)
Q Consensus 852 ~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~ 930 (2280)
.|++|||||+||++++||||+|++|+++|.. ++||||||+|+++ ||.|+|+||+|||||++|+||+|+|||+
T Consensus 379 ~G~~GEl~i~G~~v~~GY~~~p~~t~~~f~~-------~~~yrTGDl~~~~~dG~l~~~GR~dd~iki~G~ri~~~eIE~ 451 (617)
T 3rg2_A 379 QGEVGRLMTRGPYTFRGYYKSPQHNASAFDA-------NGFYCSGDLISIDPEGYITVQGREKDQINRGGEKIAAEEIEN 451 (617)
T ss_dssp TTCCEEEEEECSSSCSCCTTCHHHHHHHBCT-------TSCEEEEEEEEECTTSCEEEEEECSSEEEETTEEEEHHHHHH
T ss_pred CCCceEEEecCccccchhcCChhhhhhccCC-------CCceecCceEEEcCCceEEEEeecCCEEEECCEEeCHHHHHH
Confidence 9999999999999999999999999999964 4899999999997 9999999999999999999999999999
Q ss_pred HHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecC
Q 037878 931 TVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKP 1010 (2280)
Q Consensus 931 ~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~ 1010 (2280)
+|.+||+|.+ |+|++.+++..+ ...+++++ ..+ .....++.+.++++ .++.++.|..++.+
T Consensus 452 ~l~~~p~V~~---a~vv~~~~~~~~---------~~~~a~vv---~~~-~~~~~~l~~~l~~~---~lp~~~vP~~~~~v 512 (617)
T 3rg2_A 452 LLLRHPAVIY---AALVSMEDELMG---------EKSCAYLV---VKE-PLRAVQVRRFLREQ---GIAEFKLPDRVECV 512 (617)
T ss_dssp HHTTSTTEEE---EEEEEEEETTTE---------EEEEEEEE---ESS-CCCHHHHHHHHHTT---TCCGGGSCSEEEEC
T ss_pred HHHhCCCeeE---EEEEeccCcccC---------eeEEEEEE---eCC-CCCHHHHHHHHHhC---CCccccCCcEEEEe
Confidence 9999999975 888877654322 11222322 222 22334555555542 23333444455667
Q ss_pred CCccCCCCcccchHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHH
Q 037878 1011 RTMSKTTSGKIKRFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLV 1090 (2280)
Q Consensus 1011 ~~lP~t~sGKvdR~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw 1090 (2280)
++||+|+||||||++|++.+.+.... . ..+.+..|+.++++|
T Consensus 513 ~~lP~t~~GKidR~~L~~~~~~~~~~------------------~--------------------~~~~~~~~~~l~~~~ 554 (617)
T 3rg2_A 513 DSLPLTAVGKVDKKQLRQWLASRASA------------------G--------------------RASIPASKAALREVI 554 (617)
T ss_dssp SCCCBCTTSSBCHHHHHHHHHHHHHH------------------S--------------------SSCCCCSHHHHHHHH
T ss_pred cccCCCCCCCCcHHHHHHHHhccccc------------------c--------------------cccccccHHHHHHHH
Confidence 99999999999999998876432100 0 001123467899999
Q ss_pred HHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1091 SEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1091 ~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
+++|+.. +.++.+||||++|||||+||+|++++++ ++.++++.+||+||||++||+++++
T Consensus 555 ~~~l~~~-~~~~~~d~Ff~lGgdSl~a~~l~~~l~~-~~~~~~~~~~~~~pti~~la~~l~~ 614 (617)
T 3rg2_A 555 LPLLDES-DEPFDDDNLIDYGLDSVRMMALAARWRK-VHGDIDFVMLAKNPTIDAWWKLLSR 614 (617)
T ss_dssp GGGSCTT-CCCCTTSCGGGGTCCHHHHHHHHHHHHT-TSTTCCHHHHHHSCCHHHHHHHHCC
T ss_pred HHHhccC-CCCCCCCChhhcCccHHHHHHHHHHHHH-hcCCCCHHHHhcCCCHHHHHHHHHh
Confidence 9999843 4788999999999999999999999997 5889999999999999999999864
No 4
>1amu_A GRSA, gramicidin synthetase 1; peptide synthetase, adenylate forming; HET: PHE AMP; 1.90A {Brevibacillus brevis} SCOP: e.23.1.1
Probab=100.00 E-value=1.7e-65 Score=688.25 Aligned_cols=524 Identities=19% Similarity=0.238 Sum_probs=382.4
Q ss_pred CCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhH
Q 037878 464 EFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDF 543 (2280)
Q Consensus 464 ~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~ 543 (2280)
.++...++.+++++++++. |+++|+.+.+ +++||+||+++++++|+.|+++ |+++||+|+++++|++++
T Consensus 34 ~~~~~~~l~~~l~~~a~~~--p~~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~ 102 (563)
T 1amu_A 34 EYPRDKTIHQLFEEQVSKR--PNNVAIVCEN------EQLTYHELNVKANQLARIFIEK---GIGKDTLVGIMMEKSIDL 102 (563)
T ss_dssp CCCTTCCHHHHHHHHHHHC--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSHHH
T ss_pred CCCCCCcHHHHHHHHHHHC--CCCeEEEeCC------ceecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHH
Confidence 3555678999999988774 8999997532 5899999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccc
Q 037878 544 VDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLA 623 (2280)
Q Consensus 544 ~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 623 (2280)
++++|||+++|+++||+++.++.++ +.++++++++++++++............ ......... ..... .
T Consensus 103 ~~~~lA~~~~Gav~vpl~~~~~~~~-------l~~il~~~~~~~li~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~-~ 170 (563)
T 1amu_A 103 FIGILAVLKAGGAYVPIDIEYPKER-------IQYILDDSQARMLLTQKHLVHLIHNIQF-NGQVEIFEE---DTIKI-R 170 (563)
T ss_dssp HHHHHHHHHTTCEEEECCTTSCHHH-------HHHHHHHHTCSEEEECGGGHHHHTTSCC-CSEEEECCC---STTTT-S
T ss_pred HHHHHHHHHhCCEEEEeCCCCcHHH-------HHHHHHhcCCCEEEEcCchhhhhhhccc-cCceeeecc---hhhcc-c
Confidence 9999999999999999999999988 8899999999999998765433221110 000100000 00000 0
Q ss_pred ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccc
Q 037878 624 ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGS 703 (2280)
Q Consensus 624 ~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~ 703 (2280)
.......+..++|+|||+|||||||.||||++||+++.+.+......++++++|++++++|++|+++++ .++.+++.|+
T Consensus 171 ~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~ 249 (563)
T 1amu_A 171 EGTNLHVPSKSTDLAYVIYTSGTTGNPKGTMLEHKGISNLKVFFENSLNVTEKDRIGQFASISFDASVW-EMFMALLTGA 249 (563)
T ss_dssp CCSCCCCCCCTTSEEEEEEEC-----CEEEEEESHHHHHHHHHHHHTSCCCTTCEEEECSCTTSTHHHH-HHHHHHTTTC
T ss_pred cCccCCCCCCCCCeEEEEECCCCCCCCcEEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHHHHHH-HHHHHHHCCC
Confidence 111112345678999999999999999999999999999988888888999999999999999999974 6788999999
Q ss_pred eEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHh
Q 037878 704 TAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELT 783 (2280)
Q Consensus 704 ~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~ 783 (2280)
++++.+... ..++..+++.++++++|++.++|+++..+.. .+++++|.+++|||++++++.++|.+
T Consensus 250 ~~v~~~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~-----------~~~~~lr~~~~gG~~l~~~~~~~~~~-- 315 (563)
T 1amu_A 250 SLYIILKDT-INDFVKFEQYINQKEITVITLPPTYVVHLDP-----------ERILSIQTLITAGSATSPSLVNKWKE-- 315 (563)
T ss_dssp EEEECCHHH-HTCHHHHHHHHHHTTCCEEEECHHHHTTSCT-----------TTCCSCSEEEEESSCCCHHHHHHHTT--
T ss_pred EEEEcChHh-hcCHHHHHHHHHHcCCcEEEeCHHHHHHHHh-----------cccccccEEEEEEecCCHHHHHHHHh--
Confidence 999876432 3589999999999999999999988765521 34678999999999999999998864
Q ss_pred cCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCC
Q 037878 784 RPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSP 863 (2280)
Q Consensus 784 ~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp 863 (2280)
.+.++|.||+||++++++........ ....+++|+|+|+++++|+|+++ ..+|.|+.|||+|+||
T Consensus 316 ------~~~~~~~YG~TE~~~~~~~~~~~~~~-------~~~~~~vG~p~~~~~v~i~d~~~--~~~~~g~~GEl~v~g~ 380 (563)
T 1amu_A 316 ------KVTYINAYGPTETTICATTWVATKET-------IGHSVPIGAPIQNTQIYIVDENL--QLKSVGEAGELCIGGE 380 (563)
T ss_dssp ------TSEEEEEECCGGGSSCSEEEECCSSC-------CCSSCCCBEECTTEEEEEECTTS--CBCCTTCEEEEEEEET
T ss_pred ------CCeEEEEECcCHHhHhheeeeccccc-------CCCCCcccceeCCCEEEEECCCc--CCCCCCCcEEEEEech
Confidence 25799999999998766543221110 11236789999999999999775 4568999999999999
Q ss_pred CcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCc
Q 037878 864 SAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPG 942 (2280)
Q Consensus 864 ~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~ 942 (2280)
++++||||+|+.|+++|.++++ .++++||||||+|+++ ||+|+|+||+|||||++|+||+|.|||++|.+||+|.+
T Consensus 381 ~v~~GY~~~pe~t~~~f~~~~~-~~g~~w~~TGDlg~~d~dG~l~i~GR~~d~Ik~~G~~V~p~eIE~~l~~~p~V~~-- 457 (563)
T 1amu_A 381 GLARGYWKRPELTSQKFVDNPF-VPGEKLYKTGDQARWLSDGNIEYLGRIDNQVKIRGHRVELEEVESILLKHMYISE-- 457 (563)
T ss_dssp TCCCEETTCHHHHHHHEEECSS-STTSEEEEEEEEEEECTTSCEEEEEEGGGEEEETTEEEEHHHHHHHHTTSTTEEE--
T ss_pred hhChhhCCCchhhhhhcccCCC-CCCCEEEecCCEEEEcCCCeEEEeccccCEEEECCEEeCHHHHHHHHHhCCCcce--
Confidence 9999999999999999976443 2457899999999997 99999999999999999999999999999999999975
Q ss_pred eeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccc
Q 037878 943 CCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIK 1022 (2280)
Q Consensus 943 ~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvd 1022 (2280)
|+|++.+++..+ ..+.+++ .... ....+++++.++++|+. |++ |..++.+++||+|+|||||
T Consensus 458 -a~Vv~~~~~~~~----------~~~~a~v--v~~~-~~~~~~l~~~l~~~L~~-y~~---P~~i~~v~~lP~t~~GKi~ 519 (563)
T 1amu_A 458 -TAVSVHKDHQEQ----------PYLCAYF--VSEK-HIPLEQLRQFSSEELPT-YMI---PSYFIQLDKMPLTSNGKID 519 (563)
T ss_dssp -EEEEEEECTTSC----------EEEEEEE--EESS-CCCHHHHHHHHHHHSCG-GGS---CSEEEECSSCCBCTTSSBC
T ss_pred -EEEEEeecCCCC----------eEEEEEE--EeCC-CCCHHHHHHHHHhhCch-hhC---CcEEEEecccCCCCCcChh
Confidence 888887664321 1122222 2222 22335666666666553 444 4455566999999999999
Q ss_pred hHHHHHHhhcCCCCCCCCccchhcccccccccccccCCCCCCCCCCCCcccccCCChhHHHHHHHHHHHHHhCCC
Q 037878 1023 RFECLKQFVDGTLNTVPEPLFTKRKLTRSFTTGTCKEGRTPRPQLVSSPVASKKMSNKDIVEFLKGLVSEQTGIP 1097 (2280)
Q Consensus 1023 R~~L~~~~~~~~~~~lp~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~l~~iw~~vLg~~ 1097 (2280)
|++|++ +.... .. ......+.+++|+.|+++|+++||..
T Consensus 520 r~~L~~------------~~~~~---------~~---------------~~~~~~p~~~~e~~l~~iw~~~L~~~ 558 (563)
T 1amu_A 520 RKQLPE------------PDLTF---------GM---------------RVDYEAPRNEIEETLVTIWQDVLGSH 558 (563)
T ss_dssp GGGSCC------------CCCCC----------------------------------------------------
T ss_pred HHhcCC------------ccccc---------cc---------------ccccCCCCCHHHHHHHHHHHHHhhhh
Confidence 986422 11000 00 00112356889999999999999974
No 5
>3kxw_A Saframycin MX1 synthetase B; fatty acid AMP ligase, SGX, acyl adenylate, structural genom 2, protein structure initiative; HET: 1ZZ; 1.85A {Legionella pneumophila subsp} PDB: 3lnv_A*
Probab=100.00 E-value=5.4e-65 Score=691.84 Aligned_cols=542 Identities=34% Similarity=0.571 Sum_probs=426.1
Q ss_pred CCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 467 ELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 467 ~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
...++.+++++++++. |+++|+.+.+.+ ..+++||+||+++++++|+.|+++ |+++||+|+++++|+++++++
T Consensus 9 ~~~tl~~~l~~~a~~~--p~~~a~~~~~~~--~~~~~Ty~eL~~~~~~lA~~L~~~---gv~~gd~V~i~~~~~~~~~~~ 81 (590)
T 3kxw_A 9 QCQSLVDVVRLRALHS--PNKKSCTFLNKE--LEETMTYEQLDQHAKAIAATLQAE---GAKPGDRVLLLFAPGLPLIQA 81 (590)
T ss_dssp TCSSHHHHHHHHHHHC--TTSEEEEEEETT--EEEEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSHHHHHH
T ss_pred CcccHHHHHHHHHHhC--CCCeEEEEEcCC--eeEEEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCchhHHHH
Confidence 4568999999998874 899999887632 237999999999999999999998 999999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccc-cccccccccc
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWV-KNSKNLLAEN 625 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 625 (2280)
+|||+++|+++||+++..+... ..++.++++++++++++++.+.............+........ ..........
T Consensus 82 ~lA~~~~G~~~vpl~~~~~~~~----~~~~~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 157 (590)
T 3kxw_A 82 FLGCLYAGCIAVPIYPPAQEKL----LDKAQRIVTNSKPVIVLMIADHIKKFTADELNTNPKFLKIPAIALESIELNRSS 157 (590)
T ss_dssp HHHHHHTTCEEEEECCCCSHHH----HHHHHHHHHHHCCSEEEECHHHHHHHCC-----CCEETTEEEEEGGGCCGGGGG
T ss_pred HHHHHHhCcEEEEecCCCchHH----HHHHHHHHHhCCCCEEEeCHHHHHHHHHhhhhhcccccccceeechhccccccc
Confidence 9999999999999999875322 2337899999999999998765443322110111100000000 0000001111
Q ss_pred ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceE
Q 037878 626 VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTA 705 (2280)
Q Consensus 626 ~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~ 705 (2280)
........++|++||+|||||||.||||++||+++++.+.+....+++.++|++++++|++|+++++..++.+++.|+++
T Consensus 158 ~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~G~~~ 237 (590)
T 3kxw_A 158 SWQPTSIKSNDIAFLQYTSGSTMHPKGVMVSHHNLLDNLNKIFTSFHMNDETIIFSWLPPHHDMGLIGCILTPIYGGIQA 237 (590)
T ss_dssp GCCCCCCCTTSEEEEEECSSCSSSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHTTTHHHHHHTCEE
T ss_pred cCCCCCCCCCCeEEEEeCcCCCCCceEEEeeHHHHHHHHHHHHHhhCCCCcCeEEEecCCCcchhhHHHHHHHHhcCceE
Confidence 12234567899999999999999999999999999999999999999999999999999999999977789999999999
Q ss_pred EEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcC
Q 037878 706 ILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRP 785 (2280)
Q Consensus 706 vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~ 785 (2280)
++.++..+..+|..+++.++++++|++.++|+++..+.+...... ....++++||.+++|||++++++.++|.+.+..
T Consensus 238 v~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~~--~~~~~l~~lr~~~~gg~~l~~~~~~~~~~~~~~ 315 (590)
T 3kxw_A 238 IMMSPFSFLQNPLSWLKHITKYKATISGSPNFAYDYCVKRIREEK--KEGLDLSSWVTAFNGAEPVREETMEHFYQAFKE 315 (590)
T ss_dssp EECCHHHHHHCTHHHHHHHHHHTCSEEEECTHHHHHHHHHCCGGG--GTTCCCTTCCEEEECSSCCCHHHHHHHHHHHGG
T ss_pred EEeCHHHHHHCHHHHHHHHHHhCCeeecCChhHHHHHHHHhhhhh--ccCCCchhhHHHhhCCCCCCHHHHHHHHHHHHH
Confidence 998776555689999999999999999999999998887643222 223678999999999999999999999999877
Q ss_pred CCCCCcccccccCccccccceecccCCCCce--e---------------ecCCCceeeccccCCCCCceEEEEcCCCCcc
Q 037878 786 FGLSQGVMAPGYGLAENCVFVSCAYGQGKPI--I---------------LDWQGRVCCGYVDQNDPDVDIRIVNPETSEE 848 (2280)
Q Consensus 786 ~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~--~---------------~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~ 848 (2280)
.|+++..++|.||+||++++++......... . ....+....+++|+|+++ ++|+|++++ .
T Consensus 316 ~g~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~--v~i~d~~~~-~ 392 (590)
T 3kxw_A 316 FGFRKEAFYPCYGLAEATLLVTGGTPGSSYKTLTLAKEQFQDHRVHFADDNSPGSYKLVSSGNPIQE--VKIIDPDTL-I 392 (590)
T ss_dssp GTCCGGGEEEEEECGGGSSEEEECCTTSCCCEEEECSCCCSSSBCCBCCTTCTTCEEEECCCEESSE--EEEECTTTC-C
T ss_pred cCCCccccccccccccccceeecccCCCCceeeeecHHHHhcCceeeccCCCCCcceEeccCCCCCC--eEEEcCCCC-c
Confidence 7777889999999999998776542211000 0 001233456789999998 889998865 4
Q ss_pred cCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCC-CCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHH
Q 037878 849 IGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNN-RGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSAD 927 (2280)
Q Consensus 849 ~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~-~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~E 927 (2280)
.+|+|++|||+|+||++++||||+|+.|+++|...+.+. ++.+||||||+|+++||.|+|+||+|||||++|+||+|.|
T Consensus 393 ~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~f~~~~~~~~~g~~~~~TGDlg~~ddG~l~~~GR~dd~Ik~~G~~v~p~e 472 (590)
T 3kxw_A 393 PCDFDQVGEIWVQSNSVAKGYWNQPEETRHAFAGKIKDDERSAIYLRTGDLGFLHENELYVTGRIKDLIIIYGKNHYPQD 472 (590)
T ss_dssp BCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHCBCCTTC---CCBEEEEEEEEEETTEEEEEEESSCHHHHHHHTTHHHH
T ss_pred CCCCCCEEEEEEeCCcccccccCChhHHHHHHhccccCCCCCCcEEecCcEEEEECCEEEEEcCccceEEECCEecCHHH
Confidence 457999999999999999999999999999997643332 2445999999999999999999999999999999999999
Q ss_pred HHHHH-HhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC---CCCHHHHHHHHHHHHHhcCccee
Q 037878 928 VEKTV-ESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK---PVDKDVIENIKTRVVEEHGVTVA 1003 (2280)
Q Consensus 928 IE~~L-~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~---~~~~~l~~~l~~~l~~~~~~~~~ 1003 (2280)
||++| ..+|+|. ...|+|++++++. ....+++++..++. ...+++.+.+++++.+.+++|..
T Consensus 473 IE~~l~~~~~~v~-~~~~~v~~~~~~~-------------~~~~~~~v~~~~~~~~~~~~~~l~~~l~~~l~~~~~~p~~ 538 (590)
T 3kxw_A 473 IEFSLMHSPLHHV-LGKCAAFVIQEEH-------------EYKLTVMCEVKNRFMDDVAQDNLFNEIFELVYENHQLEVH 538 (590)
T ss_dssp HHHHHHHSGGGGG-EEEEEEEEEEETT-------------EEEEEEEEEESCTTCCHHHHHHHHHHHHHHHHHHHSCCCC
T ss_pred HHHHHHhcCcccc-CccEEEEEecCCC-------------CceEEEEEEeccccccchhHHHHHHHHHHHHHHHcCCcee
Confidence 99999 7788875 2347888876542 11222333333332 12367889999999988888877
Q ss_pred EEEEecCCCccCCCCcccchHHHHHHhhcCCCCCC
Q 037878 1004 SVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLNTV 1038 (2280)
Q Consensus 1004 ~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~~l 1038 (2280)
++.++.+++||+|+||||||++|++++.++.++.+
T Consensus 539 ~i~~v~~~~lP~t~sGKi~R~~L~~~~~~~~~~~~ 573 (590)
T 3kxw_A 539 TIVLIPLKAMPHTTSGKIRRNFCRKHLLDKTLPIV 573 (590)
T ss_dssp EEEEEETTCSCCCSCHHHHHHHHHHHHHHTCSCCS
T ss_pred EEEEECCCccCcCCCcHHHHHHHHHHHHcCCCcee
Confidence 77888889999999999999999999998876543
No 6
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=100.00 E-value=1e-64 Score=678.81 Aligned_cols=509 Identities=22% Similarity=0.301 Sum_probs=397.7
Q ss_pred CCCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCC
Q 037878 460 LPGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVP 539 (2280)
Q Consensus 460 ~~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~ 539 (2280)
.+....|...++.+++++++++. |+++|+++.+. + +++||+||+++++++|++|++. |+++||+|+++++|
T Consensus 13 ~~~~~~p~~~~l~~~l~~~a~~~--p~~~a~~~~~~-~---~~~Ty~el~~~~~~lA~~L~~~---Gv~~gd~V~i~~~~ 83 (536)
T 3ni2_A 13 LPDIYIPKNLPLHSYVLENLSNH--SSKPCLINGAN-G---DVYTYADVELTARRVASGLNKI---GIQQGDVIMLFLPS 83 (536)
T ss_dssp SCCCCCCSSCCHHHHHTTTGGGS--TTSEEEEETTT-C---CEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCS
T ss_pred CCCCCCCCCCcHHHHHHHHhhcC--CCceEEEECCC-C---CEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCC
Confidence 34445666789999999988874 89999875422 2 5899999999999999999998 99999999999999
Q ss_pred CHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCcccccccccc-
Q 037878 540 GLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHTDSWVKN- 617 (2280)
Q Consensus 540 s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~- 617 (2280)
++++++++|||+++|+++||+++.++.++ +.++++++++++++++......+.... ......+..+.....
T Consensus 84 ~~~~~~~~la~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (536)
T 3ni2_A 84 SPEFVLAFLGASHRGAIITAANPFSTPAE-------LAKHAKASRAKLLITQACYYEKVKDFARESDVKVMCVDSAPDGC 156 (536)
T ss_dssp SHHHHHHHHHHHHHTCEEEECCTTCCHHH-------HHHHHHHHTEEEEEECGGGTHHHHHHHHHHTCEEEESSCCCTTC
T ss_pred cHHHHHHHHHHHHhCCEEeccCCCCCHHH-------HHHHHHhcCCEEEEEChHHHHHHHHHHhhcCceEEEecCCCCCc
Confidence 99999999999999999999999999998 889999999999999876543322100 001111111110000
Q ss_pred --ccc--cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCcEEEEEcCchhhh
Q 037878 618 --SKN--LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK----RYKSTSKTVLVSWLPQYHDM 689 (2280)
Q Consensus 618 --~~~--~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~----~~~~~~~d~~l~~~pl~h~~ 689 (2280)
... .......+.....++|+|||+|||||||.||||++||+++++.+..... .+++.++|++++++|++|++
T Consensus 157 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~ 236 (536)
T 3ni2_A 157 LHFSELTQADENEAPQVDISPDDVVALPYSSGTTGLPKGVMLTHKGLITSVAQQVDGDNPNLYFHSEDVILCVLPMFHIY 236 (536)
T ss_dssp EETHHHHTSCGGGCCCCCCCTTSEEECCEECTTSSSCEEEEEEHHHHHHHHHHHHCSSSCSSCCCTTCCEEECSCTTSHH
T ss_pred cCHHHHhhccccccccCCCCccCEEEEEcCCCccccchHHHhhHHHHHHHHHHHHhhccccccCCCCCEEEEecChHHHH
Confidence 000 0011112233467899999999999999999999999999988776543 34678999999999999999
Q ss_pred hHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecC
Q 037878 690 GLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAE 769 (2280)
Q Consensus 690 gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe 769 (2280)
++...++.++..|+++++.+. .++..+++.++++++|++.++|+++..+.+.... ...++++||.+++|||
T Consensus 237 ~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~l~~lr~i~~gGe 307 (536)
T 3ni2_A 237 ALNSIMLCGLRVGAPILIMPK----FEIGSLLGLIEKYKVSIAPVVPPVMMSIAKSPDL-----DKHDLSSLRMIKSGGA 307 (536)
T ss_dssp HHHHTHHHHHHHTCCEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHTCSCG-----GGSCCTTCCEEEEESS
T ss_pred HHHHHHHHHHhcCCEEEEcCC----CCHHHHHHHHHHhCCeEEEccHHHHHHHHhCccc-----ccCCCccceEEEECCC
Confidence 998888999999999998763 3899999999999999999999999888653221 2357899999999999
Q ss_pred CCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccC-CCCceeecCCCceeeccccCCCCCceEEEEcCCCCcc
Q 037878 770 PVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYG-QGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEE 848 (2280)
Q Consensus 770 ~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~-~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~ 848 (2280)
++++++.++|.+.+ +++.++|.||+||++.+++.... ...+ .....+++|+|+++++++|+|++++.
T Consensus 308 ~l~~~~~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~~~~~~~~~------~~~~~~~~G~~~~~~~~~i~d~~~~~- 375 (536)
T 3ni2_A 308 PLGKELEDTVRAKF-----PQARLGQGYGMTEAGPVLAMCLAFAKEP------FDIKPGACGTVVRNAEMKIVDPETGA- 375 (536)
T ss_dssp CCCHHHHHHHHHHC-----TTSEEEEEEECGGGSSEEEECGGGSSSC------CCCCTTCCCEECSSCEEEEECTTTCC-
T ss_pred CCCHHHHHHHHHHC-----CCCCccccccccccchhhhcccccCCcc------ccCCCCCeeEeCCCcEEEEEeCCCCc-
Confidence 99999999999875 57889999999999976654321 1111 12235789999999999999977654
Q ss_pred cCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHH
Q 037878 849 IGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSAD 927 (2280)
Q Consensus 849 ~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~E 927 (2280)
.+|.|+.|||+|+||++++||||+|+.|+++|.. ++||||||+|+++ ||.|+|+||+|||||++|+||+|.|
T Consensus 376 ~~~~g~~GEl~v~g~~v~~GY~~~p~~t~~~~~~-------~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~e 448 (536)
T 3ni2_A 376 SLPRNQPGEICIRGDQIMKGYLNDPEATSRTIDK-------EGWLHTGDIGYIDDDDELFIVDRLKELIKYKGFQVAPAE 448 (536)
T ss_dssp BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCT-------TSCEEEEEEEEECTTSCEEEEEECSCCEEETTEEECHHH
T ss_pred CCCCCCccEEEEeCcccchhhcCChhHHHhhccC-------CCceEcccEEEEcCCceEEEEecccceEEECCEEECHHH
Confidence 4589999999999999999999999999999853 5899999999997 9999999999999999999999999
Q ss_pred HHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcceeEEE
Q 037878 928 VEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTVASVK 1006 (2280)
Q Consensus 928 IE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~ 1006 (2280)
||++|.+||+|.+ |+|++++++..+ +...+++ ...++... .+++++.++++|+. + +.|..
T Consensus 449 IE~~l~~~p~V~~---a~Vv~~~~~~~g----------~~~~a~v--v~~~~~~~~~~~l~~~l~~~l~~-~---~~p~~ 509 (536)
T 3ni2_A 449 LEALLIAHPEISD---AAVVGLKDEDAG----------EVPVAFV--VKSEKSQATEDEIKQYISKQVIF-Y---KRIKR 509 (536)
T ss_dssp HHHHHHTSTTEEE---EEEEEEEETTTE----------EEEEEEE--EECTTCCCCHHHHHHHHHTTSCG-G---GCCSE
T ss_pred HHHHHHhCCCcce---EEEEeeecCCCC----------ceeEEEE--EecCCCCCCHHHHHHHHHHhccC-C---ccccE
Confidence 9999999999975 889988775432 1222222 22333322 24555555555443 3 34444
Q ss_pred EecCCCccCCCCcccchHHHHHHhh
Q 037878 1007 LIKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 1007 lv~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
++.+++||+|+||||||++|++++.
T Consensus 510 i~~v~~lP~t~~GKi~R~~L~~~~~ 534 (536)
T 3ni2_A 510 VFFIEAIPKAPSGKILRKNLKEKLA 534 (536)
T ss_dssp EEECSCCCBCTTSCBCHHHHHTC--
T ss_pred EEEEecCCCCCCCCeeHHHHHHHhc
Confidence 5667999999999999999887653
No 7
>3etc_A AMP-binding protein; adenylate-forming acyl-COA synthetase ligase, ligase; HET: PGE 1PE EPE; 2.10A {Methanosarcina acetivorans}
Probab=100.00 E-value=2.2e-64 Score=679.16 Aligned_cols=500 Identities=19% Similarity=0.283 Sum_probs=379.9
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
...++++.++++ .|+++|+++.++++. .+++||+||+++++++|+.|+++ |+++||+|+++++|++++++++||
T Consensus 57 ~~~~~l~~~a~~--~pd~~Al~~~~~~g~-~~~~Ty~eL~~~~~~~A~~L~~~---Gv~~Gd~V~l~~~~~~e~~~~~lA 130 (580)
T 3etc_A 57 FAYDVVDVYARD--SPEKLAMIWCDDYGN-EKIFTFKDLKYYSDKAANFFVKH---GIGKGDYVMLTLKSRYDFWYCMLG 130 (580)
T ss_dssp HHHHTHHHHHHH--CTTCEEEEEEESSSC-EEEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECTTCTHHHHHHHH
T ss_pred HHHHHHHHHHhh--CCCCEEEEEEcCCCC-EeEEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHHH
Confidence 344899998876 489999998776554 37999999999999999999998 999999999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccc--hhhccC--CCCCC--Cccccc-----ccccc-
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYH--SAVRVG--SWPNL--PWLHTD-----SWVKN- 617 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~--~~~~~~--~~~~~--~~~~~~-----~~~~~- 617 (2280)
|+++|+++||+++.++.++ +.++++++++++++++.+.. ..+... ..+.. ..+... .+...
T Consensus 131 ~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 203 (580)
T 3etc_A 131 LHKLGAIAVPATHMLKTRD-------IVYRIEKAGLKMIVCIAEDDVPEQVDEAHAECGDIPLKKAKVGGDVLEGWIDFR 203 (580)
T ss_dssp HHHHTCEEEECCTTCCHHH-------HHHHHHHHTCCEEEEESSTTHHHHHHHHHHHHCSCCCEEEEESSSCCTTCEEHH
T ss_pred HHhCCEEEEeCCccCCHHH-------HHHHHHhcCCCEEEEecchhHHHHHHHHhhhCCCcceEEEEeCCccccccccHH
Confidence 9999999999999999988 88999999999999976543 111100 00111 001000 00000
Q ss_pred --cccccccc--ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH
Q 037878 618 --SKNLLAEN--VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG 693 (2280)
Q Consensus 618 --~~~~~~~~--~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~ 693 (2280)
........ ........++|+|||+|||||||.||||+++|++++..+.......++.+++++++.+|++|+.+++.
T Consensus 204 ~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (580)
T 3etc_A 204 KELEESSPIFERPTGEVSTKNEDICLVYFSSGTAGFPKMVEHDNTYPLGHILTAKYWQNVEDDGLHYTVADSGWGKCVWG 283 (580)
T ss_dssp HHHHHSCSCCCCCCGGGSCCTTSEEEEEEECCSSSSCEEEEEETTHHHHHHHHHHTTSCCCTTCEEEECCCTTSTHHHHH
T ss_pred HHHhhCCcccccCccccCCCCCCcEEEEEeCCCCCCccEEEeccHHHHHHHHHHHHhhCCCCCceEEEeCChHHHHHHHH
Confidence 00000000 00112457899999999999999999999999999888877777778899999999999999999887
Q ss_pred HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCH
Q 037878 694 GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQ 773 (2280)
Q Consensus 694 ~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~ 773 (2280)
.++.++..|+++++.++..+ ++..+++.++++++|++.++|++++.+.+. .....++++||.+++|||++++
T Consensus 284 ~~~~~l~~G~~~~~~~~~~~--~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~------~~~~~~l~~lr~i~~gGe~l~~ 355 (580)
T 3etc_A 284 KLYGQWIAGCAVFVYDYDRF--EAKNMLEKASKYGVTTFCAPPTIYRFLIKE------DLSHYNFSTLKYAVVAGEPLNP 355 (580)
T ss_dssp TTHHHHHTTCEEEEEECSSC--CHHHHHHHHHHHTCCEEEECHHHHHHHHTS------CC---CCTTCCEEEECSSCCCH
T ss_pred HHHHHHhCCcEEEEecCCCC--CHHHHHHHHHHHCCeEEEccHHHHHHHHhc------ccccCCCccceEEEEccCCCCH
Confidence 88999999999998865544 899999999999999999999999888652 1223678999999999999999
Q ss_pred HHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCC
Q 037878 774 TTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPG 853 (2280)
Q Consensus 774 ~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G 853 (2280)
++.++|.+.+ +++++|.||+||+++.++..... ....+++|+|+||++++|+|+++ ..+|+|
T Consensus 356 ~~~~~~~~~~------g~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~G~p~~~~~v~ivd~~g--~~~~~g 417 (580)
T 3etc_A 356 EVFNRFLEFT------GIKLMEGFGQTETVVTIATFPWM----------EPKPGSIGKPTPGYKIELMDRDG--RLCEVG 417 (580)
T ss_dssp HHHHHHHHHH------SCCCEEEECCTTSSCCEECCTTS----------CCCTTCCBEECTTCEEEEECTTS--CBCCTT
T ss_pred HHHHHHHHHh------CCeEecccccccccceeecCCCC----------CCCCCccccCCCCCEEEEECCCC--CCCCCC
Confidence 9999999875 56899999999998766543221 12347899999999999999875 456899
Q ss_pred CeeEEEEcC-----CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHH
Q 037878 854 KEGEVWISS-----PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSAD 927 (2280)
Q Consensus 854 ~~GEL~i~G-----p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~E 927 (2280)
+.|||+|+| +++++||+|+|+.|+++|. +|||||||+|+++ ||+|+|+||+|||||++|+||+|.|
T Consensus 418 ~~GEl~v~~~~g~~~~~~~gY~~~p~~t~~~f~--------~gwy~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~I~p~e 489 (580)
T 3etc_A 418 EEGEIVINTMEGKPVGLFVHYGKDPERTEETWH--------DGYYHTGDMAWMDEDGYLWFVGRADDIIKTSGYKVGPFE 489 (580)
T ss_dssp CCEEEEEECTTCCCTTCCCEETTCHHHHHHHEE--------TTEEEEEEEEEECTTSCEEEEEESSSCEEETTEEECHHH
T ss_pred CceEEEEecCCCCCCeeeccccCCHhHHHhhcC--------CCEEecCcEEEECCCCcEEEEecCCCEEEECCEEECHHH
Confidence 999999997 8899999999999999995 3899999999997 9999999999999999999999999
Q ss_pred HHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEE
Q 037878 928 VEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKL 1007 (2280)
Q Consensus 928 IE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~l 1007 (2280)
||++|.+||+|.+ |+|++++++..++ .+.++ +...++....+++.+.+++.+.+.++.++.|..+
T Consensus 490 IE~~l~~~p~V~~---a~Vvg~~~~~~g~----------~~~a~--vv~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i 554 (580)
T 3etc_A 490 VESALIQHPAVLE---CAITGVPDPVRGQ----------VIKAT--IVLTKDYTPSDSLKNELQDHVKNVTAPYKYPRII 554 (580)
T ss_dssp HHHHHTTSTTEEE---EEEEEEEETTTEE----------EEEEE--EEECTTCCCCHHHHHHHHHHHHHHSCGGGCCSEE
T ss_pred HHHHHHhCCCeee---EEEEeeeccCCCc----------EEEEE--EEECCCCCCCHHHHHHHHHHHHhhCCCccCCeEE
Confidence 9999999999975 8999988764331 22222 2234444444455566666666655555555556
Q ss_pred ecCCCccCCCCcccchHHHHHHhh
Q 037878 1008 IKPRTMSKTTSGKIKRFECLKQFV 1031 (2280)
Q Consensus 1008 v~~~~lP~t~sGKvdR~~L~~~~~ 1031 (2280)
+.+++||+|+||||||++|++++.
T Consensus 555 ~~v~~lP~t~sGKi~R~~Lr~~~~ 578 (580)
T 3etc_A 555 EFVPELPKTISGKIRRVEIRDKDQ 578 (580)
T ss_dssp EEECC-------------------
T ss_pred EEeCCCCCCCCcCCcHHHHHhHhh
Confidence 666999999999999999988754
No 8
>1pg4_A Acetyl-COA synthetase; AMP-forming, adenylate-forming, thioester-forming, ligase; HET: COA PRX; 1.75A {Salmonella enterica} SCOP: e.23.1.1 PDB: 1pg3_A* 2p2f_A* 2p2b_A* 2p2q_A* 2p2j_A* 2p20_A* 2p2m_A*
Probab=100.00 E-value=6.9e-64 Score=683.75 Aligned_cols=517 Identities=18% Similarity=0.222 Sum_probs=404.6
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++++++ +|+++|+++.+++....+++||+||+++++++|+.|+++ |+++||+|+++++|++|+++++|
T Consensus 76 n~~~~~l~~~a~~--~pd~~Al~~~~~~~~~~~~lTY~eL~~~v~~lA~~L~~~---Gv~~Gd~V~i~~~~~~e~vva~l 150 (652)
T 1pg4_A 76 NLAANCLDRHLQE--NGDRTAIIWEGDDTSQSKHISYRELHRDVCRFANTLLDL---GIKKGDVVAIYMPMVPEAAVAML 150 (652)
T ss_dssp CHHHHHTGGGHHH--HTTSEEEEEECSSTTCEEEEEHHHHHHHHHHHHHHHHHH---TCCTTCEEEEECCSSHHHHHHHH
T ss_pred hHHHHHHHHHhcc--CCCceEEEEEcCCCCceeEEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHHHHHH
Confidence 3567788877766 489999998754333347899999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh---------hcc--CCCC--CCC-ccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA---------VRV--GSWP--NLP-WLHTDSW 614 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~---------~~~--~~~~--~~~-~~~~~~~ 614 (2280)
||+++|++++|+++.++.++ +.+++++++++++|++...... +.. ...+ ... .+..+..
T Consensus 151 A~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~ 223 (652)
T 1pg4_A 151 ACARIGAVHSVIFGGFSPEA-------VAGCIIDSSSRLVITADEGVRAGRSIPLKKNVDDALKNPNVTSVEHVIVLKRT 223 (652)
T ss_dssp HHHHHTCEEEECCTTSCHHH-------HHHHHHHHTCSEEEEESEEEETTEEEESHHHHHHHHTSTTCCSCCEEEEECSS
T ss_pred HHHHcCcEEEecCCCCCHHH-------HHHHHHhcCCCEEEEcCccccCCcccchHHHHHHHHhcCCcCCCCEEEEEeCC
Confidence 99999999999999999988 8899999999999997654210 000 0000 111 1111000
Q ss_pred c------cc----ccccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCcEEEE
Q 037878 615 V------KN----SKNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVK-LMRKRYKSTSKTVLVS 681 (2280)
Q Consensus 615 ~------~~----~~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~-~~~~~~~~~~~d~~l~ 681 (2280)
. .. ..+.. ...........++|++||+|||||||+||||+++|++++..+. .....+++.++|++++
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~ 303 (652)
T 1pg4_A 224 GSDIDWQEGRDLWWRDLIEKASPEHQPEAMNAEDPLFILYTSGSTGKPKGVLHTTGGYLVYAATTFKYVFDYHPGDIYWC 303 (652)
T ss_dssp CCCCCCCBTTEEEHHHHHTTSCSCCCCCCEETTSEEEEEEECCSSSSCEEEEEESHHHHHHHHHHHHHHTTCCTTCEEEE
T ss_pred CCcccccCCCceeHHHHHhhcCCCCCccccCCCCCEEEEeccCCCCCCceEEECchHHHHHHHHHHHHhcCCCCCCEEEE
Confidence 0 00 00000 0111122345679999999999999999999999999877663 4566788999999999
Q ss_pred EcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCc
Q 037878 682 WLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSM 761 (2280)
Q Consensus 682 ~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~L 761 (2280)
++|++|++++...++.+|+.|++++++++.....+|..+++.++++++|++.++|++++.+.+..... ....++++|
T Consensus 304 ~~~~~~~~g~~~~~~~~L~~G~t~vl~~~~~~~~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~~~---~~~~~l~sL 380 (652)
T 1pg4_A 304 TADVGWVTGHSYLLYGPLACGATTLMFEGVPNWPTPARMCQVVDKHQVNILYTAPTAIRALMAEGDKA---IEGTDRSSL 380 (652)
T ss_dssp CSCTTSHHHHHHTTHHHHHTTCEEEEECSCTTSSSTTHHHHHHHHHTCSEEEECHHHHHHHHTTGGGG---TTTCCCTTC
T ss_pred ccCCeeeechHHHHHHHHHcCceEEEECCCCCCCCHHHHHHHHHHhCCeEEEeCHHHHHHHHhcCccc---cccCCcCce
Confidence 99999999987788999999999999876443458999999999999999999999999887643321 223678999
Q ss_pred cEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEE
Q 037878 762 KFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIV 841 (2280)
Q Consensus 762 r~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Iv 841 (2280)
|.+++|||++++++.+++.+.++ ..++.++|.||+||++..++....... ....+++|+|++|++++|+
T Consensus 381 r~i~~gGe~l~~~~~~~~~~~~g---~~~~~i~~~YG~TE~~~~~~~~~~~~~--------~~~~~s~G~p~~g~~v~i~ 449 (652)
T 1pg4_A 381 RILGSVGEPINPEAWEWYWKKIG---KEKCPVVDTWWQTETGGFMITPLPGAI--------ELKAGSATRPFFGVQPALV 449 (652)
T ss_dssp CEEEEESSCCCHHHHHHHHHHTT---TTCSCEEEEBCCGGGSSCSBCCCTTTC--------CBCTTCCBSBCTTCCEEEE
T ss_pred EEEEEecCCCCHHHHHHHHHHhC---CCCCcEEccccCcccccceecCCCCCc--------CccCCccccCcCCCeEEEE
Confidence 99999999999999999998752 234789999999999876554321111 1234789999999999999
Q ss_pred cCCCCcccCCCCCeeEEEEcC--CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEE
Q 037878 842 NPETSEEIGEPGKEGEVWISS--PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIV 918 (2280)
Q Consensus 842 d~~~~~~~~p~G~~GEL~i~G--p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi 918 (2280)
|+++ ..+|.|+.|||+|+| |++++||||+|+.+.+.|... .+|||||||+|+++ ||+|+|+||+|||||+
T Consensus 450 d~~g--~~v~~g~~GEl~i~g~~p~~~~gY~~~~e~~~~~~~~~-----~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik~ 522 (652)
T 1pg4_A 450 DNEG--HPQEGATEGNLVITDSWPGQARTLFGDHERFEQTYFST-----FKNMYFSGDGARRDEDGYYWITGRVDDVLNV 522 (652)
T ss_dssp CTTC--CBCCSSEEEEEEECSCCTTCCCEETTCHHHHHHHHHSS-----STTSEEEEEEEEECTTSCEEEEEESSSEEEE
T ss_pred CCCC--CCcCCCceEEEEEccCCCchhhhhcCCHHHHHhhhhhc-----CCCEEECCcEEEEcCCCcEEEEecCCCEEEE
Confidence 9875 345789999999999 799999999999998887531 24799999999997 9999999999999999
Q ss_pred CCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhc
Q 037878 919 AGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEH 998 (2280)
Q Consensus 919 ~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~ 998 (2280)
+|+||+|.|||++|.+||+|.+ |+|++++++..+ + ..++++...++...++++.+.+++.+.+++
T Consensus 523 ~G~rI~~~eIE~~l~~~p~V~e---a~Vvg~~~~~~g----------~--~l~a~Vv~~~~~~~~~~~~~~l~~~l~~~l 587 (652)
T 1pg4_A 523 SGHRLGTAEIESALVAHPKIAE---AAVVGIPHAIKG----------Q--AIYAYVTLNHGEEPSPELYAEVRNWVRKEI 587 (652)
T ss_dssp TTEEEEHHHHHHHHHHSTTEEE---EEEEEEEETTTE----------E--EEEEEEEECTTCCCCHHHHHHHHHHHHHHT
T ss_pred CCEEECHHHHHHHHHhCCCcce---EEEEEEEcCCCC----------e--EEEEEEEECCCCCCCHHHHHHHHHHHHHhC
Confidence 9999999999999999999975 899998775432 1 122233334444444455666777777666
Q ss_pred CcceeEEEEecCCCccCCCCcccchHHHHHHhhcC
Q 037878 999 GVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 999 ~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
+.++.|..++.+++||+|+||||||++|++.+.+.
T Consensus 588 ~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~~ 622 (652)
T 1pg4_A 588 GPLATPDVLHWTDSLPKTRSGKIMRRILRKIAAGD 622 (652)
T ss_dssp CGGGCCSEEEECSCCCBCTTSCBCHHHHHHHHHTC
T ss_pred CCCcCCeEEEEcCCCCCCCCccchHHHHHHHHhCC
Confidence 65666666777799999999999999999988654
No 9
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=100.00 E-value=3.3e-64 Score=667.81 Aligned_cols=491 Identities=23% Similarity=0.344 Sum_probs=382.4
Q ss_pred HHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHHHHH
Q 037878 473 GYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFGCMR 552 (2280)
Q Consensus 473 ~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA~l~ 552 (2280)
+++++.+++. |++.++...+.++ +++||+||+++++++|+.|+++ |+++||+|+++++|++++++++|||++
T Consensus 4 ~l~~~~a~~~--p~~~a~~~~~~~~---~~~Ty~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~~~~~~~~~~lA~~~ 75 (503)
T 4fuq_A 4 NLFARLFDKL--DDPHKLAIETAAG---DKISYAELVARAGRVANVLVAR---GLQVGDRVAAQTEKSVEALVLYLATVR 75 (503)
T ss_dssp CHHHHHHSCC--SCTTSEEEEETTC---CEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSCHHHHHHHHHHHH
T ss_pred hHHHHHHHhC--CCCceEEEecCCC---cEEEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHHHHHHHHH
Confidence 3677777775 5555555443333 5799999999999999999998 999999999999999999999999999
Q ss_pred cCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCcccccccccc---ccccccccccc
Q 037878 553 AKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHTDSWVKN---SKNLLAENVVC 628 (2280)
Q Consensus 553 aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~~~~~~~~~~ 628 (2280)
+|+++||+++.+|.++ +.++++++++++++++......+.... ............... ...........
T Consensus 76 ~Ga~~vpl~~~~~~~~-------l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (503)
T 4fuq_A 76 AGGVYLPLNTAYTLHE-------LDYFITDAEPKIVVCDPSKRDGIAAIAAKVGATVETLGPDGRGSLTDAAAGASEAFA 148 (503)
T ss_dssp TTCEEEECCTTCCHHH-------HHHHHHHHCCSEEEECGGGTTTTHHHHHHHTCEEEECCTTSCSHHHHHHHTSCSCCC
T ss_pred cCcEEEecCCCCCHHH-------HHHHHHhcCCcEEEECchhhHHHHHHHhhcCceEEEecCCcccccchhhhcCCCCcC
Confidence 9999999999999998 889999999999999875433211000 000000000000000 00000111112
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++|+|||+|||||||.||||++||+++.+.+......++++++|++++++|++|++++...++.+++.|+++++.
T Consensus 149 ~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~~~~l~~g~~~~~~ 228 (503)
T 4fuq_A 149 TIDRGADDLAAILYTSGTTGRSKGAMLSHDNLASNSLTLVDYWRFTPDDVLIHALPIYHTHGLFVASNVTLFARGSMIFL 228 (503)
T ss_dssp CCCCCTTSEEEEEECC--CCSCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCSSSHCCCCCCHHHHHHTTCEEEEC
T ss_pred cCCCCCCCeEEEEECCCcccCCeEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEeCChHHHHHHHHHHHHHHHhCCEEEEc
Confidence 23457899999999999999999999999999999999999999999999999999999999766778889999999887
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
+. .+|..+++.++ ++|++.++|+++..+++.... ...+++++|.+++|||++++++.++|.+.+
T Consensus 229 ~~----~~~~~~~~~i~--~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~lr~~~~gg~~l~~~~~~~~~~~~----- 292 (503)
T 4fuq_A 229 PK----FDPDKILDLMA--RATVLMGVPTFYTRLLQSPRL-----TKETTGHMRLFISGSAPLLADTHREWSAKT----- 292 (503)
T ss_dssp SS----CCHHHHHHHHT--TCCEEEECHHHHHHHHTCTTC-----STTTTTTCCEEEECSSCCCHHHHHHHHHHH-----
T ss_pred CC----CCHHHHHHHHh--hcCEEEEHHHHHHHHHhCCCc-----cccchhhcEEEEECCCCCCHHHHHHHHHHh-----
Confidence 63 38999999987 899999999999888754322 235678999999999999999999999875
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
++.++|.||+||+++.++.... +....+++|+|+|+++++|+|++++. .+|+|+.|||+|+||++++|
T Consensus 293 -~~~~~~~YG~TE~~~~~~~~~~----------~~~~~~~~G~p~~~~~~~i~d~~~g~-~~~~g~~GEl~v~g~~v~~G 360 (503)
T 4fuq_A 293 -GHAVLERYGMTETNMNTSNPYD----------GDRVPGAVGPALPGVSARVTDPETGK-ELPRGDIGMIEVKGPNVFKG 360 (503)
T ss_dssp -SCCEEECCEETTTEECBCCCSS----------SCCCTTEEEEBCTTCEEEEECTTTCC-BCCTTCCEEEEEESTTSCCC
T ss_pred -CCCccceEcccccCcccccCCC----------CCCcCCccccCCCCeEEEEEECCCCC-CCcCCCceEEEEECCchhhh
Confidence 4679999999999876542211 12234678999999999999976554 45899999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEE
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVI 947 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv 947 (2280)
|||+|+.|+++|.. ++||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.+||+|.+ |+|+
T Consensus 361 Y~~~~~~t~~~f~~-------~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~---a~vv 430 (503)
T 4fuq_A 361 YWRMPEKTKSEFRD-------DGFFITGDLGKIDERGYVHILGRGKDLVITGGFNVYPKEIESEIDAMPGVVE---SAVI 430 (503)
T ss_dssp BTTCHHHHHHTBCT-------TSCEEEEEEEEECTTCEEEECCSSTTCEEETTEEECHHHHHHHHHTSTTEEE---EEEE
T ss_pred hcCChhhhHhhhCC-------CCCeEcceeEEEcCCCcEEEEecCCCEEEECCEEECHHHHHHHHHhCCCeeE---EEEE
Confidence 99999999999964 4899999999997 99999999999999999999999999999999999975 8899
Q ss_pred eccccccccccccccCCCCceEEEEEEEecCCCCCC-HHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHH
Q 037878 948 GVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-KDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFEC 1026 (2280)
Q Consensus 948 ~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L 1026 (2280)
+++++..+ +.+.+++ ...++...+ +++++.++++|+. +++| ..++.+++||+|+||||||++|
T Consensus 431 ~~~~~~~~----------~~~~a~v--~~~~~~~~~~~~l~~~l~~~L~~-~~~P---~~i~~v~~lP~t~~GKi~R~~L 494 (503)
T 4fuq_A 431 GVPHADFG----------EGVTAVV--VRDKGATIDEAQVLHGLDGQLAK-FKMP---KKVIFVDDLPRNTMGKVQKNVL 494 (503)
T ss_dssp EEEETTTE----------EEEEEEE--EECTTCCCCHHHHHHHHBTTBCG-GGCC---SEEEEESCCCBCTTSCBCHHHH
T ss_pred EeEchhcC----------ceeEEEE--EeCCCCCCCHHHHHHHHHhhccc-CCCC---CEEEEECCCCCCcccceeHHHH
Confidence 88775432 1222222 233333333 4555666655543 4444 3444559999999999999999
Q ss_pred HHHhhc
Q 037878 1027 LKQFVD 1032 (2280)
Q Consensus 1027 ~~~~~~ 1032 (2280)
+++|.+
T Consensus 495 ~~~~~~ 500 (503)
T 4fuq_A 495 RETYKD 500 (503)
T ss_dssp HHHTTT
T ss_pred HHHHHH
Confidence 998754
No 10
>3g7s_A Long-chain-fatty-acid--COA ligase (FADD-1); protein structure initiative, PSI-II, NYSGXRC, 11193J, structural genomics; 2.15A {Archaeoglobus fulgidus dsm 4304}
Probab=100.00 E-value=1.5e-64 Score=679.01 Aligned_cols=513 Identities=21% Similarity=0.287 Sum_probs=367.9
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCC--CceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEE--GVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVD 545 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~--g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~v 545 (2280)
..++.+++++++++. |+++|+.+.+.+ ....+++||+||+++++++|+.|+++ |+++||+|+++++|++++++
T Consensus 18 ~~~l~~~l~~~a~~~--p~~~A~~~~~~~~~~~~~~~~Ty~el~~~~~~lA~~L~~~---Gv~~gd~V~i~~~~~~~~~~ 92 (549)
T 3g7s_A 18 KISLADRIDAAAEKF--GEKTAIISAEPKFPSEFPESMNFLEICEVTKKLASGISRK---GVRKGEHVGVCIPNSIDYVM 92 (549)
T ss_dssp CCCTTHHHHHHHHHH--TTSEEEEEESSCCCCSSCSEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSHHHHH
T ss_pred CCCHHHHHHHHHHhC--CCceEEEeCCCcccccccceeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEECCCCHHHHH
Confidence 467889999988874 899999887632 11236899999999999999999998 99999999999999999999
Q ss_pred HHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC-CCCCCCcc-ccccccccccccc-
Q 037878 546 AFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG-SWPNLPWL-HTDSWVKNSKNLL- 622 (2280)
Q Consensus 546 a~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~~- 622 (2280)
++|||+++|+++||+++.+|.++ +.++++++++++++++.......... .......+ ..........+..
T Consensus 93 ~~lA~~~~G~~~vpl~~~~~~~~-------l~~il~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 165 (549)
T 3g7s_A 93 TIYALWRVAATPVPINPMYKSFE-------LEHILNDSEATTLVVHSMLYENFKPVLEKTGVERVFVVGGEVNSLSEVMD 165 (549)
T ss_dssp HHHHHHHTTCEEEECCTTCCHHH-------HHHHHHHTTCSEEEEEGGGHHHHHHHHTTSCCCEEEEETCSSSCHHHHHH
T ss_pred HHHHHHHhCCEEEccCCCCCHHH-------HHHHHHhcCCCEEEEChHHHHHHHHHHhhCCCcEEEEeCCCCcCHHHHHh
Confidence 99999999999999999999998 88999999999999987654432210 00001110 0000000000000
Q ss_pred -cccccccCCCCC-CCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 623 -AENVVCFTESQP-DDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 623 -~~~~~~~~~~~~-~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
...........+ +|+|||+|||||||.||||+++|+++++.+......+++.++|++++++|++|++++.. ++.++.
T Consensus 166 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~~~~~p~~~~~~~~~-~~~~l~ 244 (549)
T 3g7s_A 166 SGSEDFENVKVNPEEDVALIPYTGGTTGMPKGVMLTHFNLAANALQLAVATGLSHMDTIVGCMPMFHSAEFGL-VNLMVT 244 (549)
T ss_dssp HSCSCCCCCCCCTTTSEEECCEECCCCC-CEEEEEEHHHHHHHHHHHHHHHCCCTTCEEECCSCTTSHHHHHH-HTTHHH
T ss_pred cCccccccccCCCCCCEEEEEECCCccCCCceEEEcHHHHHHHHHHHHHHcCCCCCCEEEEeCcHHHHHHHHH-HHHHHh
Confidence 001111222334 89999999999999999999999999999999999999999999999999999999865 788899
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|+++++.+. .++..+++.++++++|++.++|+++..+.+....... ..+++++|.+++|||++++++.+++.
T Consensus 245 ~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~---~~~~~~lr~~~~gg~~l~~~~~~~~~ 317 (549)
T 3g7s_A 245 VGNEYVVMGM----FNQEMLAENIEKYKGTFSWAVPPALNVLVNTLESSNK---TYDWSYLKVFATGAWPVAPALVEKLL 317 (549)
T ss_dssp HCCEEEEESS----CCHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHSCC---CCCCTTCCEEEEESSCCCHHHHHHHH
T ss_pred cCceEEEcCC----CCHHHHHHHHHHhCCeEEEeCCHHHHHHHhhhhhhcc---cCCccceeEEEeCCccCCHHHHHHHH
Confidence 9999998762 3899999999999999999999999999877654432 25688999999999999999999998
Q ss_pred HHhc-CCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEE
Q 037878 781 ELTR-PFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVW 859 (2280)
Q Consensus 781 ~~~~-~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~ 859 (2280)
+.+. .++.+.+.++|.||+||++++++...... ....+++|+|+++++++|+|++++. .+|.|+.|||+
T Consensus 318 ~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~G~p~~~~~~~i~d~~~g~-~~~~g~~GEl~ 387 (549)
T 3g7s_A 318 KLAAEKCNNPRLRHNQIWGMTEACPMVTTNPPLR---------LDKSTTQGVPMSDIELKVISLEDGR-ELGVGESGEIV 387 (549)
T ss_dssp HHHHHHSSCTTCEEEEEEECGGGSSEEEECCGGG---------GGGTTSCCEECTTCEEEEECSSSCC-EECTTCCEEEE
T ss_pred HHHHhhcCCccccccceEeccccchhhhcCCccc---------cCcCCCccccCCCCEEEEEeCCCCc-CCCCCCceEEE
Confidence 8621 12335588999999999998776543211 1124678999999999999966554 45799999999
Q ss_pred EcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCC
Q 037878 860 ISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 860 i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
|+||++++||||+|+.|+++|..+ .++.+||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.+||+|
T Consensus 388 v~g~~v~~GY~~~~~~t~~~f~~~---~~g~~~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V 464 (549)
T 3g7s_A 388 IRGPNIFKGYWKREKENQECWWYD---EKGRKFFRTGDVGFIDEEGFLHFQDRVKEVIKYKGYTIAPFELEALLMKHEAV 464 (549)
T ss_dssp EESTTSCSEETTCTTGGGTSEEEC---TTCCEEEEEEEEEEECTTSCEEEEEEC------------CHHHHHHHTTSTTE
T ss_pred EECcchhhhhCCChhhhhhhhhcc---CCCCceEccCcEEEEcCCceEEEeccccceEEECCEEECHHHHHHHHHhCCCe
Confidence 999999999999999999999532 2456799999999997 999999999999999999999999999999999999
Q ss_pred cCCceeEEEeccccccccccccccCCCCceEEEEEEEecCC---CCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccC
Q 037878 939 IRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDG---KPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSK 1015 (2280)
Q Consensus 939 ~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~---~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~ 1015 (2280)
.+ |+|++.+++..++ ...++++ . .++ ....++++++++++|+. |++|. .++.+++||+
T Consensus 465 ~~---a~Vv~~~~~~~g~---------~~~a~vv-~--~~~~~~~~~~~~l~~~l~~~L~~-~~~P~---~i~~v~~lP~ 525 (549)
T 3g7s_A 465 MD---VAVIGKPDEEAGE---------VPKAFIV-L--KPEYRGKVDEEDIIEWVRERISG-YKRVR---EVEFVEELPR 525 (549)
T ss_dssp EE---EEEECCCC---------------CEEEEE-E--CSTTTTSCCHHHHHHHHHTTCC------C---CCCEEEECC-
T ss_pred ee---EEEEeeEccccCc---------eEEEEEE-E--CCCccCcCCHHHHHHHHHHhccC-cccce---EEEEeccCCC
Confidence 75 8999887764321 2223333 2 222 22335566666666553 44443 3444589999
Q ss_pred CCCcccchHHHHHHhhc
Q 037878 1016 TTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1016 t~sGKvdR~~L~~~~~~ 1032 (2280)
|+||||||++|++++.+
T Consensus 526 t~~GKi~R~~L~~~~~~ 542 (549)
T 3g7s_A 526 TASGKLLRRLLREKEAE 542 (549)
T ss_dssp -----------------
T ss_pred CCCcCEeHHHHHHHhhc
Confidence 99999999998887543
No 11
>3r44_A Fatty acyl COA synthetase FADD13 (fatty-acyl-COA synthetase); ligase; HET: HIS; 1.80A {Mycobacterium tuberculosis} PDB: 3t5c_A 3t5b_A
Probab=100.00 E-value=6.5e-64 Score=667.35 Aligned_cols=498 Identities=22% Similarity=0.299 Sum_probs=391.8
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
.+...++.+++++++++. |+++|+.+.+. .+++||+||+++++++|+.|+++ |+++||+|+++++|+++++
T Consensus 12 ~~~~~~l~~~l~~~a~~~--p~~~A~~~~~~----~~~~Ty~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~~~~~~~ 82 (517)
T 3r44_A 12 DDKMKNIGWMLRQRATVS--PRLQAYVEPST----DVRMTYAQMNALANRCADVLTAL---GIAKGDRVALLMPNSVEFC 82 (517)
T ss_dssp CGGGGCHHHHHHHHHHHS--TTSEEEEEGGG----TEEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSHHHH
T ss_pred cccccCHHHHHHHHHHhC--CCCeEEEeCCc----CceeeHHHHHHHHHHHHHHHHHc---CCCCcCEEEEEcCCCHHHH
Confidence 345678999999998874 89999986532 14899999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCC-ccccccccccccc-
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLP-WLHTDSWVKNSKN- 620 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~-~~~~~~~~~~~~~- 620 (2280)
+++|||+++|+++||+++.+|.++ +.++++++++++++++......+... ...... .+...........
T Consensus 83 ~~~lA~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (517)
T 3r44_A 83 CLFYGAAKLGAVAVPINTRLAAPE-------VSFILSDSGSKVVIYGAPSAPVIDAIRAQADPPGTVTDWIGADSLAERL 155 (517)
T ss_dssp HHHHHHHHHTCEEEECCTTSCHHH-------HHHHHHHHTCSEEEECGGGHHHHHHHHHSSSCCTTCCEEEEHHHHHHHH
T ss_pred HHHHHHHHhCcEEEecCcccCHHH-------HHHHHHhcCceEEEECCchHHHHHHHHhccCCccEEEEccCcccHHHHh
Confidence 999999999999999999999998 88999999999999987654332110 001110 1111000000000
Q ss_pred cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHH
Q 037878 621 LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMV 700 (2280)
Q Consensus 621 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~ 700 (2280)
.......+.....++|++||+|||||||.||||++||+++.+.+......+++.++|++++++|++|++++...++..+
T Consensus 156 ~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~~~~~~~~- 234 (517)
T 3r44_A 156 RSAAADEPAVECGGDDNLFIMYTSGTTGHPKGVVHTHESVHSAASSWASTIDVRYRDRLLLPLPMFHVAALTTVIFSAM- 234 (517)
T ss_dssp HHCCCCCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHSCCCTTCEEEECSCTTSHHHHHHHHHHHH-
T ss_pred hccCcCCCCCCCCCCCeEEEEECCcccccCceeeeeHHHHHHHHHHHHHhcCCCCCCEEEEeCchHHHHHHHHHHHHHh-
Confidence 0011112233467899999999999999999999999999999999999999999999999999999999866555555
Q ss_pred ccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHH
Q 037878 701 GGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFV 780 (2280)
Q Consensus 701 ~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~ 780 (2280)
.|+++++.+. .++..+++.++++++|++.++|+++..+.+...... .++++||.+++|||++++++.++|.
T Consensus 235 ~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-----~~~~~lr~i~~gGe~l~~~~~~~~~ 305 (517)
T 3r44_A 235 RGVTLISMPQ----FDATKVWSLIVEERVCIGGAVPAILNFMRQVPEFAE-----LDAPDFRYFITGGAPMPEALIKIYA 305 (517)
T ss_dssp HTCEEEECSS----CCHHHHHHHHHHTTCCEEEECHHHHHHHHHSHHHHH-----CCCTTCCEEEECSSCCCHHHHHHHH
T ss_pred cCeEEEEeCC----CCHHHHHHHHHHhCCeEEEeHHHHHHHHHhCccccc-----CCCCcccEEEECCCCCCHHHHHHHH
Confidence 8888888753 389999999999999999999999998876543222 5688999999999999999999988
Q ss_pred HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEE
Q 037878 781 ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWI 860 (2280)
Q Consensus 781 ~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i 860 (2280)
+. +++++|.||+||+++.++....... ....+++|+|+++++++|+|+++ ..++.| .|||+|
T Consensus 306 ~~-------~~~~~~~YG~TE~~~~~~~~~~~~~--------~~~~~~~G~~~~~~~~~i~d~~~--~~~~~g-~GEl~v 367 (517)
T 3r44_A 306 AK-------NIEVVQGYALTESCGGGTLLLSEDA--------LRKAGSAGRATMFTDVAVRGDDG--VIREHG-EGEVVI 367 (517)
T ss_dssp HT-------TCEEEEEEECGGGTTCEEEECGGGT--------TTTTTCCBEECTTEEEEEECTTS--CEESSE-EEEEEE
T ss_pred hc-------CCcEEEeecccccccceeecCCccc--------cccCCCCCcCCCCeEEEEECCCC--CCCCCC-CeEEEE
Confidence 74 5689999999999887665432110 11246789999999999999875 344677 899999
Q ss_pred cCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCc
Q 037878 861 SSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHI 939 (2280)
Q Consensus 861 ~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~ 939 (2280)
+||++++||||+|+.|+++|. +|||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.+||+|.
T Consensus 368 ~g~~v~~GY~~~p~~t~~~f~--------~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~ 439 (517)
T 3r44_A 368 KSDILLKEYWNRPEATRDAFD--------NGWFRTGDIGEIDDEGYLYIKDRLKDMIISGGENVYPAEIESVIIGVPGVS 439 (517)
T ss_dssp EETTSCSEETTCHHHHHHTEE--------TTEEEEEEEEEECTTSCEEEEECGGGCEEETTEEECHHHHHHHHTTSTTEE
T ss_pred eCcchhhhhCCChhhhHhhhc--------CCCEecceeEEEcCCeeEEEecCCcCEEEECCEEECHHHHHHHHHhCCCEe
Confidence 999999999999999999994 3899999999997 9999999999999999999999999999999999997
Q ss_pred CCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCc
Q 037878 940 RPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSG 1019 (2280)
Q Consensus 940 ~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sG 1019 (2280)
+ |+|++.+++..+ ..+.+++ .. .......+++.++++++|+. +++| ..++.+++||+|+||
T Consensus 440 ~---~~Vv~~~~~~~g----------~~~~a~v-~~-~~~~~~~~~l~~~l~~~L~~-~~~P---~~i~~v~~lP~t~~G 500 (517)
T 3r44_A 440 E---VAVIGLPDEKWG----------EIAAAIV-VA-DQNEVSEQQIVEYCGTRLAR-YKLP---KKVIFAEAIPRNPTG 500 (517)
T ss_dssp E---EEEEEEEETTTE----------EEEEEEE-EE-CTTTCCHHHHHHHHHHHSCG-GGSC---SEEEECSCCCBCTTC
T ss_pred E---EEEEeccccccC----------ceEEEEE-EC-CCCCCCHHHHHHHHHHhCCC-CCCC---CEEEEECCCCCCCCc
Confidence 5 889988775432 2223333 22 22223335666667666654 4444 445566999999999
Q ss_pred ccchHHHHHHhhcC
Q 037878 1020 KIKRFECLKQFVDG 1033 (2280)
Q Consensus 1020 KvdR~~L~~~~~~~ 1033 (2280)
||||++|+++|.+.
T Consensus 501 Ki~R~~L~~~~~~~ 514 (517)
T 3r44_A 501 KILKTVLREQYSAT 514 (517)
T ss_dssp CBCHHHHHHHHGGG
T ss_pred CccHHHHHHHHHhh
Confidence 99999999998654
No 12
>3fce_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, AMP-forming domain, adenylation, D-alanine protein ligase, ATP complex; HET: ATP; 1.90A {Bacillus cereus} PDB: 3fcc_A* 3dhv_A*
Probab=100.00 E-value=9e-64 Score=666.54 Aligned_cols=505 Identities=19% Similarity=0.276 Sum_probs=396.7
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
+++.+++++++++. |+++|+.+.+ +++||+||+++++++|++|+++ |+++||+|+++++|++++++++|
T Consensus 1 m~l~~~l~~~a~~~--p~~~A~~~~~------~~~Ty~el~~~~~~lA~~L~~~---g~~~gd~V~i~~~n~~e~~~~~l 69 (512)
T 3fce_A 1 MKLLEQIEKWAAET--PDQTAFVWRD------AKITYKQLKEDSDALAHWISSE---YPDDRSPIMVYGHMQPEMIINFL 69 (512)
T ss_dssp CCHHHHHHHHHHHS--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHH---STTCCCCEEEEESSCHHHHHHHH
T ss_pred CcHHHHHHHHHHHC--CCceEEEeCC------ceEEHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEeCCCHHHHHHHH
Confidence 46788999988874 8999998643 5899999999999999999998 89999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+++|+++||+++.++.++ +.++++++++++++++....... ........+.+..............
T Consensus 70 a~~~~G~v~vpl~~~~~~~~-------l~~il~~~~~~~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 137 (512)
T 3fce_A 70 GCVKAGHAYIPVDLSIPADR-------VQRIAENSGAKLLLSATAVTVTD-----LPVRIVSEDNLKDIFFTHKGNTPNP 137 (512)
T ss_dssp HHHHTTCCEEEEETTSCHHH-------HHHHHHHSCCCEEEESSCCCSSC-----CSSEEEETHHHHHHHHHTTTCCCCG
T ss_pred HHHHhCCEEEeeCCCCcHHH-------HHHHHHhcCCCEEEecCcccccc-----cccceechhhhhhhcccccccCCCc
Confidence 99999999999999999988 88999999999999874322110 0011111111100000000111112
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++|++||+|||||||.||||++||+++.+.+.+....+++.++|++++++|++|+++++ .++.+++.|+++++.
T Consensus 138 ~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~~-~~~~~l~~G~~~~~~ 216 (512)
T 3fce_A 138 EHAVKGDENFYIIYTSGSTGNPKGVQITYNCLVSFTKWAVEDFNLQTGQVFLNQAPFSFDLSVM-DIYPSLVTGGTLWAI 216 (512)
T ss_dssp GGSCCTTSEEEEEEECC----CEEEEEEHHHHHHHHHHHHHHTTCCSSCEEEECSCTTSGGGHH-HHHHHHHTTCEEEEC
T ss_pred cccCCCCCeEEEEECCCCCCCCceEEEehHHHHHHHHHHHHhcCCCCCCEEEEeCCccHhHHHH-HHHHHHhCCCEEEEC
Confidence 3346789999999999999999999999999999999999999999999999999999999974 689999999999987
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
++. ...+|..+++.++++++|++.++|+++..++..... ...+++++|.+++|||++++++.++|.+.+
T Consensus 217 ~~~-~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~lr~~~~~G~~l~~~~~~~~~~~~----- 285 (512)
T 3fce_A 217 DKD-MIARPKDLFASLEQSDIQVWTSTPSFAEMCLMEASF-----SESMLPNMKTFLFCGEVLPNEVARKLIERF----- 285 (512)
T ss_dssp CHH-HHHSHHHHHHHHHHHCCCEEEECHHHHHHHTTSTTC-----STTTSTTCCEEEECSSCCCHHHHHHHHHHC-----
T ss_pred CHH-HhhCHHHHHHHHHHcCCcEEEecHHHHHHHHhhccc-----cchhCccccEEEEecCcCCHHHHHHHHHHC-----
Confidence 653 234899999999999999999999999877643221 235688999999999999999999999885
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
+++.++|.||+||+++.++......... .....+++|+|+++++++|+|+++ ..+|+|+.|||+|+||+++.|
T Consensus 286 ~~~~i~~~YG~TE~~~~~~~~~~~~~~~-----~~~~~~~~G~~~~~~~~~i~d~~g--~~~~~g~~GEl~v~g~~v~~G 358 (512)
T 3fce_A 286 PKATIMNTYGPTEATVAVTGIHVTEEVL-----DQYKSLPVGYCKSDCRLLIMKEDG--TIAPDGEKGEIVIVGPSVSVG 358 (512)
T ss_dssp TTCEEEEEECCGGGSSCSEEEECCHHHH-----HHCSSCCCEEECTTCEEEEECSSS--CBCCTTSCEEEEEESTTSCSC
T ss_pred CCCEEEeCcccChhhhheeeEEeccccc-----cccCCCccccccCCcEEEEECCCC--CCCCCCCeEEEEEeccccChh
Confidence 5788999999999998766432211000 011235689999999999999765 456899999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEe
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIG 948 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~ 948 (2280)
|||+|+.|+++|.. .++++||||||+|+++||.|+|+||+||+||++|+||+|.|||++|.+||+|.+ |+|++
T Consensus 359 Y~~~~~~t~~~f~~----~~~~~~~~TGDlg~~~dG~l~i~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~---a~vv~ 431 (512)
T 3fce_A 359 YLGSPELTEKAFTM----IDGERAYKTGDAGYVENGLLFYNGRLDFQIKLHGYRMELEEIEHHLRACSYVEG---AVIVP 431 (512)
T ss_dssp BTTCHHHHHHHEEE----ETTEEEEEEEEEEEEETTEEEEEEEGGGCEEETTEEECHHHHHHHHHHSTTEEE---EEEEE
T ss_pred hcCCchhhhhcccc----CCCCEEEeCCceEEecCCEEEEecccCCEEEECCEEECHHHHHHHHHhCCCcce---EEEEE
Confidence 99999999999953 235689999999999999999999999999999999999999999999999975 88888
Q ss_pred ccccccccccccccCCCCceEEEEEEEecCCCCCC-HHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 949 VPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD-KDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~-~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
++++..+ +.+ ++++...++.... .++.+.+++.+.+.++.++.|..++.+++||+|+||||||++|+
T Consensus 432 ~~~~~~~----------~~~--~a~vv~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~~~~~~~lP~t~~GKi~R~~L~ 499 (512)
T 3fce_A 432 IKKGEKY----------DYL--LAVVVPGEHSFEKEFKLTSAIKKELNERLPNYMIPRKFMYQSSIPMTPNGKVDRKKLL 499 (512)
T ss_dssp EEETTEE----------EEE--EEEEEECSCCCSSHHHHHHHHHHHHHTTSCGGGSCSEEEECSCCCBCTTSSBCHHHHH
T ss_pred EecCCCc----------eEE--EEEEecCCccccchhhhHHHHHHHHHhhCchhcCCeEEEEecccCCCCCcChHHHHHH
Confidence 7664322 112 2222233332222 34566677777776666666667777899999999999999999
Q ss_pred HHhhcCC
Q 037878 1028 KQFVDGT 1034 (2280)
Q Consensus 1028 ~~~~~~~ 1034 (2280)
+.+.+..
T Consensus 500 ~~~~~~~ 506 (512)
T 3fce_A 500 SEVTALE 506 (512)
T ss_dssp HHHHC--
T ss_pred hhhhhcc
Confidence 9986643
No 13
>1mdb_A 2,3-dihydroxybenzoate-AMP ligase; adenylation domain, peptide synthetase, antibiotic biosynthesis, siderophore formation; HET: AMP DBH; 2.15A {Bacillus subtilis} SCOP: e.23.1.1 PDB: 1md9_A* 1mdf_A
Probab=100.00 E-value=9.4e-64 Score=669.35 Aligned_cols=494 Identities=21% Similarity=0.289 Sum_probs=392.2
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++++++. |+++|+.+.+ +++||+||+++++++|+.|+++ |+++||+|+++++|++++++++
T Consensus 24 ~~tl~~~l~~~a~~~--p~~~A~~~~~------~~~Ty~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~~~~~~~~~~ 92 (539)
T 1mdb_A 24 GETFGDLLRDRAAKY--GDRIAITCGN------THWSYRELDTRADRLAAGFQKL---GIQQKDRVVVQLPNIKEFFEVI 92 (539)
T ss_dssp SCCHHHHHHHHHHHH--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHH---TCCTTCEEEECCCSSHHHHHHH
T ss_pred CCCHHHHHHHHHHHC--CCCEEEEeCC------CcccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCcHHHHHHH
Confidence 358999999988874 8999997532 5899999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch--------hhccCCCCCCCcccc-ccc--cc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS--------AVRVGSWPNLPWLHT-DSW--VK 616 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~--------~~~~~~~~~~~~~~~-~~~--~~ 616 (2280)
|||+++|+++||+++.++.++ +.++++++++++++++..... .+.. ..+....+.. ... ..
T Consensus 93 lA~~~~Ga~~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~ 164 (539)
T 1mdb_A 93 FALFRLGALPVFALPSHRSSE-------ITYFCEFAEAAAYIIPDAYSGFDYRSLARQVQS-KLPTLKNIIVAGEAEEFL 164 (539)
T ss_dssp HHHHHHTCEEEECCTTCCHHH-------HHHHHHHTTCSEEEEESEETTEEHHHHHHHHHH-HCTTCCCEEEESCCTTSE
T ss_pred HHHHHcCeEEecCCCCCCHHH-------HHHHHHhCCCCEEEeccccccccHHHHHHHHHh-cCCCccEEEEcCCccchh
Confidence 999999999999999999888 889999999999999765321 1110 0111111111 000 00
Q ss_pred cccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHH-HH
Q 037878 617 NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIG-GL 695 (2280)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~-~i 695 (2280)
.... ............++|+|||+|||||||+||||++||+++++.+......++++++|++++++|++|++++.. .+
T Consensus 165 ~~~~-~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~~~~~ 243 (539)
T 1mdb_A 165 PLED-LHTEPVKLPEVKSSDVAFLQLSGGSTGLSKLIPRTHDDYIYSLKRSVEVCWLDHSTVYLAALPMAHNYPLSSPGV 243 (539)
T ss_dssp EGGG-CCCCCCCCCCCCTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECSCTTSHHHHHSSHH
T ss_pred hhhh-ccccccccCCCCcCceEEEEeCCCcCCCCcEEEEehHHHHHHHHHHHHhhCCCCCCEEEEeecccccchhhHHHH
Confidence 0000 001111223457899999999999999999999999999999998888899999999999999999999865 78
Q ss_pred HHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHH
Q 037878 696 FTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTT 775 (2280)
Q Consensus 696 ~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l 775 (2280)
+.+|+.|+++++.+. .+|..+++.++++++|++.++|+++..+++...... .++++||.+++|||++++++
T Consensus 244 ~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-----~~l~~lr~~~~gG~~l~~~~ 314 (539)
T 1mdb_A 244 LGVLYAGGRVVLSPS----PSPDDAFPLIEREKVTITALVPPLAMVWMDAASSRR-----DDLSSLQVLQVGGAKFSAEA 314 (539)
T ss_dssp HHHHHTTCEEEECSS----SSHHHHHHHHHHHTCSEEEECHHHHHHHHHHHHHCC-----CCCTTCCEEEEESSCCCHHH
T ss_pred HHHHHhCCEEEECCC----CCHHHHHHHHHHcCCeEEEccHHHHHHHHhCccccC-----CCccceeEEEEcCCCCCHHH
Confidence 999999999998753 389999999999999999999999999887654332 56899999999999999999
Q ss_pred HHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCc-eEEEEcCCCCcccCCCCC
Q 037878 776 VKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDV-DIRIVNPETSEEIGEPGK 854 (2280)
Q Consensus 776 ~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~-~v~Ivd~~~~~~~~p~G~ 854 (2280)
.++|.+.+ ++.++|.||+||+++.++.... + .....+++|+|+++. +++|+|+++ ..+|.|+
T Consensus 315 ~~~~~~~~------~~~~~~~YG~TE~~~~~~~~~~---~------~~~~~~~~G~p~~~~~~~~i~d~~~--~~~~~g~ 377 (539)
T 1mdb_A 315 ARRVKAVF------GCTLQQVFGMAEGLVNYTRLDD---P------EEIIVNTQGKPMSPYDESRVWDDHD--RDVKPGE 377 (539)
T ss_dssp HTTHHHHT------CSEEEEEEECTTSCEEECCTTS---C------HHHHHHCCCEESSTTCEEEEECTTS--CBCCTTC
T ss_pred HHHHHHHh------CCcEEEEEcCCCCcccccCCCC---c------HHhcCCCCCcccCCCceEEEECCCC--CCCcCCC
Confidence 99998874 4689999999997654332111 0 012346789999765 899999775 4568999
Q ss_pred eeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHH
Q 037878 855 EGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVE 933 (2280)
Q Consensus 855 ~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~ 933 (2280)
.|||+|+||++++||||+|+.|+++|.. ++||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.
T Consensus 378 ~GEl~v~g~~v~~GY~~~~~~t~~~f~~-------~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~ 450 (539)
T 1mdb_A 378 TGHLLTRGPYTIRGYYKAEEHNAASFTE-------DGFYRTGDIVRLTRDGYIVVEGRAKDQINRGGEKVAAEEVENHLL 450 (539)
T ss_dssp CEEEEEECTTSCSSCTTCHHHHHHHBCT-------TSCEEEEEEEEECTTSCEEEEEEGGGCEECSSCEECHHHHHHHHT
T ss_pred cceEEeeCcccchhhcCChhhhhhhccC-------CCCeecCceEEECCCCcEEEeccccceEEECCEEECHHHHHHHHH
Confidence 9999999999999999999999999964 4899999999997 9999999999999999999999999999999
Q ss_pred hccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHH-HHHhcCcceeEEEEecCCC
Q 037878 934 SSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTR-VVEEHGVTVASVKLIKPRT 1012 (2280)
Q Consensus 934 ~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~-l~~~~~~~~~~~~lv~~~~ 1012 (2280)
+||+|.+ |+|++.+++..++ .+.+++ ...+.....+++.+.++++ |+. |++| ..++.+++
T Consensus 451 ~~p~V~~---a~vv~~~~~~~g~----------~~~a~v--v~~~~~~~~~~l~~~l~~~~L~~-~~~P---~~i~~v~~ 511 (539)
T 1mdb_A 451 AHPAVHD---AAMVSMPDQFLGE----------RSCVFI--IPRDEAPKAAELKAFLRERGLAA-YKIP---DRVEFVES 511 (539)
T ss_dssp TSTTEEE---EEEEEEEETTTEE----------EEEEEE--EESSSCCCHHHHHHHHHHTTCCG-GGSC---SEEEECSS
T ss_pred hCCCcce---EEEEeccccccCc----------eEEEEE--EECCCCCCHHHHHHHHHhCCCCc-ccCC---CEEEEecc
Confidence 9999975 8899887754331 122222 2232222335666666665 443 4444 44555699
Q ss_pred ccCCCCcccchHHHHHHhhcC
Q 037878 1013 MSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1013 lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
||+|+||||||++|++++.+.
T Consensus 512 lP~t~~GKi~r~~L~~~~~~~ 532 (539)
T 1mdb_A 512 FPQTGVGKVSKKALREAISEK 532 (539)
T ss_dssp CCBCTTSCBCHHHHHHHHHHH
T ss_pred CCCCCCcCEeHHHHHHHHHHH
Confidence 999999999999999987654
No 14
>4gr5_A Non-ribosomal peptide synthetase; MBTH-like domain, adenylation domain, ligase, rossmann fold, binding; HET: APC TLA; 1.92A {Streptomyces lydicus} PDB: 4gr4_A
Probab=100.00 E-value=1.9e-64 Score=680.90 Aligned_cols=495 Identities=20% Similarity=0.231 Sum_probs=321.3
Q ss_pred CCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHH
Q 037878 466 PELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVD 545 (2280)
Q Consensus 466 ~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~v 545 (2280)
+...++.+++++++++. |+++|+.+.+ +++||+||+++++++|++|+++ |+++||+|+++++|++++++
T Consensus 72 ~~~~~l~~~l~~~a~~~--pd~~A~~~~~------~~~Ty~el~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n~~~~~~ 140 (570)
T 4gr5_A 72 PAGACVHELFEAQAARA--PDAVALLHEA------DELTYGALNERANRLAHRLVGL---GVAPGTLVGVHLERGFDMVV 140 (570)
T ss_dssp CCSCCHHHHHHHHHHHC--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSHHHHH
T ss_pred CccCCHHHHHHHHHHHC--CCCeEEECCC------CcEeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHHH
Confidence 34678999999998874 8999998632 5899999999999999999998 99999999999999999999
Q ss_pred HHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccccc
Q 037878 546 AFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAEN 625 (2280)
Q Consensus 546 a~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (2280)
++|||+++|+++||+++.++.++ +.++++++++++++++......+. ....+...+. .......
T Consensus 141 ~~lA~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~-----~~~~~~~~~~----~~~~~~~ 204 (570)
T 4gr5_A 141 ALLAVLKAGGGYTMLDPQFPVER-------LALSLEDTGAPLLVTSRPLSGRLT-----GTTTLYVEDE----AASDAPA 204 (570)
T ss_dssp HHHHHHHTTCEEEECCTTSCHHH-------HHHHHHHHTCSEEEECTTTTTSSC-----SSEEEECCC-----------C
T ss_pred HHHHHHHHCCEEEEcCCCChHHH-------HHHHHHhcCCCEEEecchhhhccc-----CCcceeeecc----ccccccc
Confidence 99999999999999999999888 889999999999999865433221 1111111000 0000111
Q ss_pred ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceE
Q 037878 626 VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTA 705 (2280)
Q Consensus 626 ~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~ 705 (2280)
........++|+|||+|||||||.||||++||+++.+.+.. ...+++.+++++++++|++|+.+. ..++.+++.|+++
T Consensus 205 ~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~-~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~ 282 (570)
T 4gr5_A 205 GNLATGVGPEDVACVMFTSGSTGRPKGVMSPHRALTGTYLG-QDYAGFGPDEVFLQCSPVSWDAFG-LELFGALLFGARC 282 (570)
T ss_dssp CCCCCCCCTTSEEEEECCSSCCSSCCCEEEEHHHHHHHHSS-CCSSCCSTTCEEEECSCTTSSTHH-HHHHHHHTTTCEE
T ss_pred cccCCCCCCCCeEEEEECCcCCCCCeEEEEecHHHHHHHHh-hhhcCCCCCCEEEEecCccHHHHH-HHHHHHHhcCCEE
Confidence 11223467899999999999999999999999999876654 345678899999999999998776 4688899999999
Q ss_pred EEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcC
Q 037878 706 ILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRP 785 (2280)
Q Consensus 706 vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~ 785 (2280)
++.++.. .+|..+++.++++++|++.++|+++..+.+... .++++||.+++|||++++++++++.+.+
T Consensus 283 v~~~~~~--~~~~~~~~~i~~~~vt~~~~~P~~~~~l~~~~~--------~~~~~lr~~~~gG~~l~~~~~~~~~~~~-- 350 (570)
T 4gr5_A 283 VLQSGQN--PDPLEIGELVARHGVTMLQLSASLFNFLVDEVP--------EAFEGVRYAITGGEPASVPHVAKARRDH-- 350 (570)
T ss_dssp EECSSSS--CCHHHHHHHHHHHTCCEEEEEHHHHHHHHHHCG--------GGGTTCSEEEEESSCCCHHHHHHHHHHC--
T ss_pred EEcCCcc--CCHHHHHHHHHHcCCcEEEecHHHHHHHHhhch--------hhCCCceEEEEecccCCHHHHHHHHHhC--
Confidence 9876543 389999999999999999999999998876432 3478999999999999999999999875
Q ss_pred CCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCc
Q 037878 786 FGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSA 865 (2280)
Q Consensus 786 ~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v 865 (2280)
+++.++|.||+||++++++........ ......++|+|+++++++|+|+++ ..+|.|++|||+|+||++
T Consensus 351 ---~~~~l~~~YG~TE~~~~~~~~~~~~~~------~~~~~~~iG~p~~~~~v~i~d~~~--~~~~~G~~GEl~v~g~~v 419 (570)
T 4gr5_A 351 ---PALRLGNGYGPAESMGFTTHHAVVAGD------LSGTALPIGVPLAGKRAYVLDDDL--KPAANGALGELYVAGAGL 419 (570)
T ss_dssp ---TTCEEEEEECCGGGCSCSEEEECCGGG------TTSSSCCCBEECTTEEEEEECTTS--CBCCTTCEEEEEEEETTC
T ss_pred ---CCcEEEEeechhhheeeeeeeeecccc------cCCCccccceeeCCCEEEEECCCC--CCCCCCCcEEEEEeeccc
Confidence 578899999999998876643221110 011235689999999999999775 455799999999999999
Q ss_pred ccccCCCchhhHHHHhhhccC-CCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCce
Q 037878 866 GIGYWGREELSQITFRNELQN-NRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGC 943 (2280)
Q Consensus 866 ~~GY~~~p~~t~~~f~~~~~~-~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~ 943 (2280)
++||||+|+.|+++|..+++. .+++|||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.+||+|.+
T Consensus 420 ~~GY~~~~~~t~~~f~~~~~~~~~~~~w~~TGDlg~~d~dG~l~~~GR~~d~Ik~~G~~v~p~eIE~~l~~~p~V~~--- 496 (570)
T 4gr5_A 420 AHGYVSRPALTAERFVADPFAGPGGERMYRTGDLARRRADGVLEYVGRADDQVKIRGFRVEPGEVEARLVGHPAVRQ--- 496 (570)
T ss_dssp CCEETTCHHHHHHHEEECTTCCSSCCEEEEEEEEEEECTTSCEEEEEC--------------------------------
T ss_pred chhcCCCchhhhcccccCCCCCCCCCEEEeCCCeEEECCCCeEEEEcccCCEEEECcEEeCHHHHHHHHhcCCCcce---
Confidence 999999999999999876543 3567999999999997 99999999999999999999999999999999999976
Q ss_pred eEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccch
Q 037878 944 CAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKR 1023 (2280)
Q Consensus 944 aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR 1023 (2280)
|+|++.+++..+ ...+++++. .........++++++++++|+. ++ .|..++.+++||+|+||||||
T Consensus 497 a~Vv~~~~~~~~---------~~~~a~vv~-~~~~~~~~~~~l~~~l~~~l~~-~~---~P~~i~~v~~lP~t~~GKi~R 562 (570)
T 4gr5_A 497 AAVLAQDSRLGD---------KQLVAYVVA-ERADAPPDAAELRRHVAEALPA-YM---VPVECVPVDELPRTPNGKLDR 562 (570)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred EEEEEeeCCCCC---------eEEEEEEEe-cCCCCCcCHHHHHHHHHhhCcc-cc---CCcEEEEcccCCCCCCcCcch
Confidence 888887665322 122333332 1111122234666777776654 44 444556679999999999999
Q ss_pred HHHHHH
Q 037878 1024 FECLKQ 1029 (2280)
Q Consensus 1024 ~~L~~~ 1029 (2280)
++|++.
T Consensus 563 ~~L~~~ 568 (570)
T 4gr5_A 563 RALTGS 568 (570)
T ss_dssp ------
T ss_pred Hhhhcc
Confidence 987653
No 15
>3e7w_A D-alanine--poly(phosphoribitol) ligase subunit 1; DLTA, non-ribosomal peptide synthetase, NRPS, adenylation domain, D-alanylation; HET: AMP; 2.28A {Bacillus subtilis} PDB: 3e7x_A*
Probab=100.00 E-value=4.6e-63 Score=659.15 Aligned_cols=502 Identities=20% Similarity=0.230 Sum_probs=399.3
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
+++.+++++++++. |+++|+.+.+ +++||+||+++++++|+.|+++. |+++||+|+++++|++++++++|
T Consensus 1 m~l~~~l~~~a~~~--p~~~Al~~~~------~~~Ty~eL~~~~~~~A~~L~~~~--~~~~g~~V~i~~~n~~~~~~~~l 70 (511)
T 3e7w_A 1 MKLLHAIQTHAETY--PQTDAFRSQG------QSLTYQELWEQSDRAAAAIQKRI--SGEKKSPILVYGHMEPHMIVSFL 70 (511)
T ss_dssp CCHHHHHHHHHHHS--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHTTTS--CSSSCCCEEEEESSCHHHHHHHH
T ss_pred CcHHHHHHHHHHHC--CCCeEEEcCC------ceeeHHHHHHHHHHHHHHHHHhc--CCCCCCeEEEEecCCHHHHHHHH
Confidence 46788999888874 8999997532 58999999999999999998753 78899999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+++|+++||+++.++.++ +.++++++++++++++......... .....+...++.... ......
T Consensus 71 A~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~---~~~~~~~~~~~~~~~----~~~~~~ 136 (511)
T 3e7w_A 71 GSVKAGHPYIPVDLSIPSER-------IAKIIESSGAELLIHAAGLSIDAVG---QQIQTVSAEELLENE----GGSVSQ 136 (511)
T ss_dssp HHHHHTCCEEEEETTSCHHH-------HHHHHHHHTCCEEEESSSCCTTCCC---CSSCEEEHHHHHTSC----SCCCCG
T ss_pred HHHHhCCEEEecCCCChHHH-------HHHHHHhCCCCEEEecccccchhcc---cccceecHhhhhccc----cCCccc
Confidence 99999999999999999988 8899999999999986543211110 111111111111110 011112
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++|++||+|||||||.||||++||+++.+.+.+....+++.+++++++++|++|++++ ..++.++..|+++++.
T Consensus 137 ~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~~~-~~~~~~l~~G~~~~~~ 215 (511)
T 3e7w_A 137 DQWVKEHETFYIIYTSGSTGNPKGVQISAANLQSFTDWICADFPVSGGKIFLNQAPFSFDLSV-MDLYPCLQSGGTLHCV 215 (511)
T ss_dssp GGSCCTTSEEEEEEECCTTSSCEEEEEEHHHHHHHHHHHHHHSTTTTTCEEEECSCTTSTHHH-HHHHHHHHTTCEEEEC
T ss_pred cccCCCCCeEEEEECCCCCCCCCEEEEcHHHHHHHHHHHHHhcCCCccceEEEeCCccHHHHH-HHHHHHHhcCCEEEEc
Confidence 234568999999999999999999999999999999999999999999999999999999997 4689999999999887
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
+... ..+|..+++.++++++|++.++|+++..++..... ...+++++|.+++|||++++++.+++.+.+
T Consensus 216 ~~~~-~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~l~~~~~~G~~l~~~~~~~~~~~~----- 284 (511)
T 3e7w_A 216 TKDA-VNKPKVLFEELKKSGLNVWTSTPSFVQMCLMDPGF-----SQDLLPHADTFMFCGEVLPVSVAKALLERF----- 284 (511)
T ss_dssp CHHH-HHSHHHHHHHHHHHCCSEEEECHHHHHHHHTSTTC-----STTTCTTCCEEEECSSCCCHHHHHHHHHHC-----
T ss_pred Chhh-hcCHHHHHHHHHHcCCcEEEecHHHHHHHHhcccc-----ccccCCcccEEEEecCCCCHHHHHHHHHHC-----
Confidence 6432 34899999999999999999999999887653221 235688999999999999999999999885
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIG 868 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~G 868 (2280)
+++.++|.||+||+++.++........ ......+++|+|+|+++++|+|+++ ..+|+|+.|||+|+||++++|
T Consensus 285 ~~~~i~~~YG~TE~~~~~~~~~~~~~~-----~~~~~~~~~G~~~~~~~~~i~d~~g--~~~~~g~~GEl~v~g~~v~~G 357 (511)
T 3e7w_A 285 PKAKIFNTYGPTEATVAVTSVEITNDV-----ISRSESLPVGFAKPDMNIFIMDEEG--QPLPEGEKGEIVIAGPSVSRG 357 (511)
T ss_dssp TTCEEEECCCCGGGSSCSEEEEECHHH-----HTTCSSCCCBEECTTCEEEEECTTS--CBCCTTCCEEEEEESTTSCCC
T ss_pred CCcEEEeCcccchheeeeeEEeccccc-----cccCCcCCCcceeCCCEEEEECCCC--CCCCCCCceEEEEecCccChh
Confidence 578899999999998776643211100 0111235689999999999999875 455899999999999999999
Q ss_pred cCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEe
Q 037878 869 YWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIG 948 (2280)
Q Consensus 869 Y~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~ 948 (2280)
|||+|+.|+++|..+ ++.+||||||+|+++||.|+|+||+|||||++|+||+|.|||++|.+||+|.+ |+|++
T Consensus 358 Y~~~~~~t~~~f~~~----~g~~~~~TGDlg~~~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p~V~~---a~vv~ 430 (511)
T 3e7w_A 358 YLGEPELTEKAFFSH----EGQWAYRTGDAGFIQDGQIFCQGRLDFQIKLHGYRMELEEIEFHVRQSQYVRS---AVVIP 430 (511)
T ss_dssp BTTCHHHHHHHEEES----SSSEEEEEEEEEEEETTEEEEEEESSSEEEETTEEEEHHHHHHHHHHSTTEEE---EEEEE
T ss_pred hCCCcccchhhhcCC----CCCEEEeCCCeEEccCCeEEEEccccCEEEECCEEeCHHHHHHHHHhCCCcce---EEEEE
Confidence 999999999999642 34568999999999999999999999999999999999999999999999975 88888
Q ss_pred ccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHH
Q 037878 949 VPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECL 1027 (2280)
Q Consensus 949 ~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~ 1027 (2280)
++++..+ +.+.+++ ...++... ..++.+.+++.+.++++.++.|..++.+++||+|+||||||++|+
T Consensus 431 ~~~~~~~----------~~~~a~v--v~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~~~~v~~lP~t~~GKi~R~~L~ 498 (511)
T 3e7w_A 431 YQPNGTV----------EYLIAAI--VPEEHEFEKEFQLTSAIKKELAASLPAYMIPRKFIYQDHIQMTANGKIDRKRIG 498 (511)
T ss_dssp ECSSSSC----------CEEEEEE--EECCCCCSSHHHHHHHHHHHHHHHSCGGGSCSEEEECSCCCBCTTSCBCHHHHH
T ss_pred EcCCCCc----------eEEEEEE--EeccccccchhhHHHHHHHHHHhhCchhhCCeeEEEeccCCCCCCcCccHHHHH
Confidence 7654321 2222222 22333222 234566677777766666666666777899999999999999999
Q ss_pred HHhhc
Q 037878 1028 KQFVD 1032 (2280)
Q Consensus 1028 ~~~~~ 1032 (2280)
+.+.+
T Consensus 499 ~~~~~ 503 (511)
T 3e7w_A 499 EEVLV 503 (511)
T ss_dssp HHHHH
T ss_pred hHHhh
Confidence 98754
No 16
>1t5h_X 4-chlorobenzoyl COA ligase; adenylate-forming coenzyme A ligase domain alternation confo change; 2.00A {Alcaligenes SP} SCOP: e.23.1.1 PDB: 1t5d_X 3cw9_A* 3cw8_X* 2qvz_X* 2qw0_X* 3dlp_X* 2qvx_X* 2qvy_X*
Probab=100.00 E-value=1.2e-62 Score=653.98 Aligned_cols=492 Identities=19% Similarity=0.258 Sum_probs=385.2
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++++++ +|+++|+.+.+ ++ +++||+||+++++++|+.|+++ |+++||+|+++++|++++++++|
T Consensus 2 ~tl~~~l~~~a~~--~p~~~a~~~~~-~~---~~~Ty~el~~~~~~~A~~L~~~---Gv~~gd~V~i~~~~~~~~~~~~l 72 (504)
T 1t5h_X 2 QTVNEMLRRAATR--APDHCALAVPA-RG---LRLTHAELRARVEAVAARLHAD---GLRPQQRVAVVAPNSADVVIAIL 72 (504)
T ss_dssp CCHHHHHHHHHHH--CTTSEEEEETT-TT---EEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSCHHHHHHHH
T ss_pred CcHHHHHHHHHHh--CCCceEEEEcC-CC---ceeEHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHHH
Confidence 4688899988877 48999997542 12 5899999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEE--ccccchhh-ccCCCCCCCcccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILS--TIGYHSAV-RVGSWPNLPWLHTDSWVKNSKNLLAEN 625 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~--~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~ 625 (2280)
||+++|+++||+++.++.++ +.+++++++++++++ +......+ ... +....+..+++...........
T Consensus 73 A~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~ 143 (504)
T 1t5h_X 73 ALHRLGAVPALLNPRLKSAE-------LAELIKRGEMTAAVIAVGRQVADAIFQSG--SGARIIFLGDLVRDGEPYSYGP 143 (504)
T ss_dssp HHHHHTCEEEEECTTSCHHH-------HHHHHHHTTCSEEEECC--CHHHHHHHHC--CCCEEEEGGGTEETTEECCCSC
T ss_pred HHHHhCcEEEecCCccChHH-------HHHHHhhcCCcEEEEecchhhhhhhhhcc--ccceeEEecchhhcCcccccCC
Confidence 99999999999999999988 889999999999999 65443322 111 1122222222211100000011
Q ss_pred ccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCC--CCCcEEEEEcCchhhhhHHHHHHHHHHccc
Q 037878 626 VVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKS--TSKTVLVSWLPQYHDMGLIGGLFTAMVGGS 703 (2280)
Q Consensus 626 ~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~--~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~ 703 (2280)
........++|+|||+|||||||+||||++||+++.+.+......+++ .+++++++++|++|++++...++.++..|+
T Consensus 144 ~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~~~~g~~~~~~~~l~~G~ 223 (504)
T 1t5h_X 144 PIEDPQREPAQPAFIFYTSGTTGLPKAAIIPQRAAESRVLFMSTQVGLRHGRHNVVLGLMPLYHVVGFFAVLVAALALDG 223 (504)
T ss_dssp CCCCCCCCTTSEEEEEECCC---CCCEEEEEGGGHHHHHHHHHHTTCCCSSTTCEEEECSCTTSHHHHTTTHHHHHHTTC
T ss_pred ccCCCCCCCCCeEEEEeCCCCCCCCCEEEecHHHHHHHHHHHHHhhCCCCCCCceEEeecchhhcchHHHHHHHHHHcCc
Confidence 111134568999999999999999999999999999998888888888 889999999999999998777899999999
Q ss_pred eEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHh
Q 037878 704 TAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELT 783 (2280)
Q Consensus 704 ~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~ 783 (2280)
++++.+. .+|..+++.++++++|++.++|+++..+.+...... ...++++||.+++|||++++++.++|.+.+
T Consensus 224 ~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~---~~~~l~~lr~~~~gG~~l~~~~~~~~~~~~ 296 (504)
T 1t5h_X 224 TYVVVEE----FRPVDALQLVQQEQVTSLFATPTHLDALAAAAAHAG---SSLKLDSLRHVTFAGATMPDAVLETVHQHL 296 (504)
T ss_dssp EEEECSS----CCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHCCTT---CCCCCTTCCEEEECCTTCCHHHHHHHHHHC
T ss_pred eEEeCCC----CCHHHHHHHHHHhCCeEEEeChHHHHHHHhhhcccc---ccccCccccEEEEcCCcCCHHHHHHHHHhc
Confidence 9998763 389999999999999999999999999887642211 125689999999999999999999999874
Q ss_pred cCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCC-cccCCCCCeeEEEEc-
Q 037878 784 RPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETS-EEIGEPGKEGEVWIS- 861 (2280)
Q Consensus 784 ~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~-~~~~p~G~~GEL~i~- 861 (2280)
++.++|.||+||+++ +.... . ...+++|.|.++++++|+|++++ ...+|.|+.|||+|+
T Consensus 297 ------~~~~~~~YG~TE~~~-~~~~~-~-----------~~~~~~g~p~~~~~~~i~~~~~~~~~~~~~g~~GEl~v~g 357 (504)
T 1t5h_X 297 ------PGEKVNIYGTTEAMN-SLYMR-Q-----------PKTGTEMAPGFFSEVRIVRIGGGVDEIVANGEEGELIVAA 357 (504)
T ss_dssp ------CSEEEEEEEETTTEE-EEEEE-S-----------CSSSSEEBCCTTCCEEEECTTSCTTCBCCTTCCEEEEEEC
T ss_pred ------Ccceeeeeccccccc-ccccc-C-----------CCCCccccCCCCCceeEEeccCCCCCcCCCCCcceEEEeC
Confidence 467999999999932 22211 1 12367889999999999997652 245689999999999
Q ss_pred CCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcC
Q 037878 862 SPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIR 940 (2280)
Q Consensus 862 Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~ 940 (2280)
|+++++||+|+|+.|+++|. +|||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.+||+|.+
T Consensus 358 g~~~~~GY~~~~~~t~~~f~--------~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~~p~V~~ 429 (504)
T 1t5h_X 358 SDSAFVGYLNQPQATAEKLQ--------DGWYRTSDVAVWTPEGTVRILGRVDDMIISGGENIHPSEIERVLGTAPGVTE 429 (504)
T ss_dssp CTTSCCCBTTCHHHHHHHEE--------TTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHHHHHTTSTTEEE
T ss_pred CceeeceecCCchhhhhhhc--------CCccccCcEEEECCCceEEEeCcccCEEEECCEEECHHHHHHHHHhCCCcce
Confidence 99999999999999999994 3799999999997 99999999999999999999999999999999999975
Q ss_pred CceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-CHHHHHHHHH-HHHHhcCcceeEEEEecCCCccCCCC
Q 037878 941 PGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-DKDVIENIKT-RVVEEHGVTVASVKLIKPRTMSKTTS 1018 (2280)
Q Consensus 941 ~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-~~~l~~~l~~-~l~~~~~~~~~~~~lv~~~~lP~t~s 1018 (2280)
|+|++.+++..+ +.+.+++ ...++... .+++.+.+++ +|+. |++| ..++.+++||+|+|
T Consensus 430 ---a~Vv~~~~~~~g----------~~~~a~v--v~~~~~~~~~~~l~~~~~~~~L~~-~~~P---~~i~~v~~lP~t~~ 490 (504)
T 1t5h_X 430 ---VVVIGLADQRWG----------QSVTACV--VPRLGETLSADALDTFCRSSELAD-FKRP---KRYFILDQLPKNAL 490 (504)
T ss_dssp ---EEEEEEECSSSS----------EEEEEEE--EECTTCCCCHHHHHHHHHTSSCCG-GGSC---SEEEECSCCCBCTT
T ss_pred ---EEEEEeecCCCC----------cEEEEEE--EecCCcCcCHHHHHHHHhhccCcc-cccc---eEEEEhhhCCCCCC
Confidence 899988775432 1222222 23333322 3455566655 4443 4444 44555699999999
Q ss_pred cccchHHHHHHhh
Q 037878 1019 GKIKRFECLKQFV 1031 (2280)
Q Consensus 1019 GKvdR~~L~~~~~ 1031 (2280)
|||||++|++++.
T Consensus 491 GKi~r~~L~~~~~ 503 (504)
T 1t5h_X 491 NKVLRRQLVQQVS 503 (504)
T ss_dssp SCBCHHHHHHHHC
T ss_pred CCEeHHHHHHHhc
Confidence 9999999998763
No 17
>1ry2_A Acetyl-coenzyme A synthetase 1, acyl-activating enzyme 1; AMP forming, related to firefly luciferase, ligase; HET: AMP; 2.30A {Saccharomyces cerevisiae} SCOP: e.23.1.1
Probab=100.00 E-value=6e-63 Score=674.27 Aligned_cols=518 Identities=19% Similarity=0.231 Sum_probs=396.5
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHH-hcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLL-TSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~-~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
.++.+++++++++ .|+++|+++.+++....+++||+||.++++++|+.|+ ++ |+++||+|+|+++|++|+++++
T Consensus 82 n~~~~~l~~~a~~--~pd~~Al~~~~~~~~~~~~~TY~eL~~~v~~lA~~L~~~~---Gv~~Gd~V~i~~~~~~e~v~a~ 156 (663)
T 1ry2_A 82 NACYNCVDRHALK--TPNKKAIIFEGDEPGQGYSITYKELLEEVCQVAQVLTYSM---GVRKGDTVAVYMPMVPEAIITL 156 (663)
T ss_dssp CHHHHHTHHHHTT--CTTSEEEEEECSSTTCCEEEEHHHHHHHHHHHHHHHHHTS---CCCTTCEEEECCCSSHHHHHHH
T ss_pred cHHHHHHHHHhcc--CCCceEEEEEcCCCCceEEEEHHHHHHHHHHHHHHHHHhc---CCCCCCEEEEEcCCCHHHHHHH
Confidence 4577888887766 4899999987543223478999999999999999998 88 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchh---------hc--cCCCCCCC-cccccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSA---------VR--VGSWPNLP-WLHTDSWV 615 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~---------~~--~~~~~~~~-~~~~~~~~ 615 (2280)
|||+++|++++|+++.++.++ +.+++++++++++|++...... +. ....+.+. .+..+...
T Consensus 157 lA~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vi~~~~~~ 229 (663)
T 1ry2_A 157 LAISRIGAIHSVVFAGFSSNS-------LRDRINDGDSKVVITTDESNRGGKVIETKRIVDDALRETPGVRHVLVYRKTN 229 (663)
T ss_dssp HHHHHTTCEEEECCTTSCHHH-------HHHHHHHHTCSEEEEESBCCBTTBCCBHHHHHHHHTTSCTTCCEEEEECSSC
T ss_pred HHHHHcCCEEEeeCCCCCHHH-------HHHHHHhcCCeEEEEccccccCCcccchHHHHHHHHHhCCCCceEEEEecCC
Confidence 999999999999999999988 8899999999999997654221 00 00111111 11000000
Q ss_pred -------cc----ccccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHH-HHHHHcCCCCCcEEEE
Q 037878 616 -------KN----SKNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVK-LMRKRYKSTSKTVLVS 681 (2280)
Q Consensus 616 -------~~----~~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~-~~~~~~~~~~~d~~l~ 681 (2280)
.. ..+.. ...........++|++||+|||||||+||||+++|++++..+. .....+++.++|++++
T Consensus 230 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~ilyTSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~~~ 309 (663)
T 1ry2_A 230 NPSVAFHAPRDLDWATEKKKYKTYYPCTPVDSEDPLFLLYTSGSTGAPKGVQHSTAGYLLGALLTMRYTFDTHQEDVFFT 309 (663)
T ss_dssp CSSCCCCSSSEEEHHHHHTTSCSCCCCCCEETTSCCEEEEECCSSSSCEEEEECSHHHHHHHHHHHHHHSCCCSSCEEEE
T ss_pred CCccccCCCccccHHHHHhhcCCCCCccccCCCCceEEEeccCCCCCCceEEEchhHHHHHHHHHHHHhcCCCCCcEEEE
Confidence 00 00000 0111122345679999999999999999999999999876654 4556788999999999
Q ss_pred EcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCc
Q 037878 682 WLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSM 761 (2280)
Q Consensus 682 ~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~L 761 (2280)
.+|++|+++....++.+|+.|++++++++.....+|..+++.++++++|++.++|++++.+.+.... .....++++|
T Consensus 310 ~~~~~~~~g~~~~~~~~L~~G~t~v~~~~~~~~~~~~~~~~~i~~~~vt~~~~~Ps~~~~l~~~~~~---~~~~~~l~sL 386 (663)
T 1ry2_A 310 AGDIGWITGHTYVVYGPLLYGCATLVFEGTPAYPNYSRYWDIIDEHKVTQFYVAPTALRLLKRAGDS---YIENHSLKSL 386 (663)
T ss_dssp CSCTTSHHHHHHTTHHHHHHTSEEEEECSCTTSSCTTHHHHHHHHTTCSEEEECHHHHHHHTTSCTT---SSSSCCCTTC
T ss_pred cCCcHHhhhhHHHHHHHHHhCCEEEEECCCCCCCCHHHHHHHHHHcCCCEEEecHHHHHHHHhcCcc---ccccCCcCce
Confidence 9999999998778899999999999987644445899999999999999999999999888643221 1233678999
Q ss_pred cEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEE
Q 037878 762 KFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIV 841 (2280)
Q Consensus 762 r~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Iv 841 (2280)
|.+++|||++++++.+++.+.+ |.+++.++|.||+||++..++.....+. .....+++|+|++|++++|+
T Consensus 387 r~i~~gGe~l~~~~~~~~~~~~---g~~~~~i~~~YG~TE~~~~~~~~~~~~~-------~~~~~gs~G~p~~g~~v~i~ 456 (663)
T 1ry2_A 387 RCLGSVGEPIAAEVWEWYSEKI---GKNEIPIVDTYWQTESGSHLVTPLAGGV-------TPMKPGSASFPFFGIDAVVL 456 (663)
T ss_dssp CEEEECSSCCCHHHHHHHHHTT---SCSSSCEEECBCCTTTCSCSEECCTTTC-------CCCCTTCCCEECTTCCEEEE
T ss_pred EEEEEEcCCCCHHHHHHHHHHh---CCCCceEEEeECCccccCeeeccCCCCC-------cccCCCccccCcCCCeEEEE
Confidence 9999999999999999998865 2245889999999999876554322010 01234789999999999999
Q ss_pred cCCCCcccCCC-CCeeEEEEcC--CCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEE
Q 037878 842 NPETSEEIGEP-GKEGEVWISS--PSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLII 917 (2280)
Q Consensus 842 d~~~~~~~~p~-G~~GEL~i~G--p~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IK 917 (2280)
|++++..+ +. |+.|||+|+| |++++||||+|+.|.+.|... .+|||||||+|+++ ||+|+|+||+|||||
T Consensus 457 d~~~g~~v-~~~g~~Gel~i~g~~p~~~~gy~~~~~~~~~~~~~~-----~~g~y~TGDlg~~d~dG~l~i~GR~dd~Ik 530 (663)
T 1ry2_A 457 DPNTGEEL-NTSHAEGVLAVKAAWPSFARTIWKNHDRYLDTYLNP-----YPGYYFTGDGAAKDKDGYIWILGRVDDVVN 530 (663)
T ss_dssp CSSSTTCE-ECSSCEEEEEESSCCTTSCCEETTCHHHHHHHHTSS-----STTSEEEEEEEEECTTCCEEECSCTTSCBC
T ss_pred cCCCCCcC-CCCCcceEEEEecCCCchhcccccChHHHHHhhhcC-----CCCEEEcCCEEEEcCCCCEEEEeecCCEEE
Confidence 98444444 45 9999999999 589999999999999988531 24799999999997 999999999999999
Q ss_pred ECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC---C-CH---HHHHHH
Q 037878 918 VAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP---V-DK---DVIENI 990 (2280)
Q Consensus 918 i~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~---~-~~---~l~~~l 990 (2280)
++|+||+|.|||++|.+||+|.+ |+|++++++..+ ...+++++. .++.. . ++ ++.+.+
T Consensus 531 ~~G~rI~~~eIE~~l~~~p~V~e---a~Vvg~~~~~~g---------~~~~a~Vv~---~~~~~~~~~~~~~~~~l~~~l 595 (663)
T 1ry2_A 531 VSGHRLSTAEIEAAIIEDPIVAE---CAVVGFNDDLTG---------QAVAAFVVL---KNKSSWSTATDDELQDIKKHL 595 (663)
T ss_dssp SSSCCBCHHHHHHHHHSSTTEEE---EEEECCCCCTTS---------CCCEEEEEE---C------------CCSHHHHH
T ss_pred ECCEEcCHHHHHHHHHhCCCcce---EEEEEEecCCCC---------eEEEEEEEE---cCCCccccccchhHHHHHHHH
Confidence 99999999999999999999875 899998776432 223344433 22211 1 11 345556
Q ss_pred HHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHHhhc
Q 037878 991 KTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 991 ~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
++.+.+.++.++.|..++.+++||+|+||||+|++|++.+.+
T Consensus 596 ~~~l~~~L~~~~~P~~i~~v~~lP~T~sGKi~R~~L~~~~~~ 637 (663)
T 1ry2_A 596 VFTVRKDIGPFAAPKLIILVDDLPKTRSGKIMRRILRKILAG 637 (663)
T ss_dssp HHHHHHHTCTTTSCSEEEECSCCCBCTTSCBCHHHHHHSCC-
T ss_pred HHHHHHhCCCCcCCeEEEEcCCCCCCCccCchHHHHHHHHcC
Confidence 666666555555555666779999999999999999887644
No 18
>3o83_A Peptide arylation enzyme; ligase, adenylation of 2,3-dihydroxybenzoate and transfer to pantetheine cofactor of BASF; HET: IXN; 1.90A {Acinetobacter baumannii} SCOP: e.23.1.0 PDB: 3o82_A* 3o84_A* 3u16_A* 3u17_A*
Probab=100.00 E-value=2.1e-63 Score=666.72 Aligned_cols=496 Identities=18% Similarity=0.222 Sum_probs=319.7
Q ss_pred CCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 467 ELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 467 ~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
...++.+++++++++. |+++|+.+.+ +++||+||+++++++|+.|+++ |+++||+|+++++|+++++++
T Consensus 28 ~~~tl~~~l~~~a~~~--p~~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n~~~~~~~ 96 (544)
T 3o83_A 28 IDQPLTRILTVGVQSH--PHSLAIICGE------RQLSYIELDRLSTNLATRLAEK---GLGKGDTALVQLPNVAEFYIV 96 (544)
T ss_dssp CCCCTTHHHHHHHHHC--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEECCCSSHHHHHH
T ss_pred CCCCHHHHHHHHHHhC--CCceEEEcCC------CceeHHHHHHHHHHHHHHHHHC---CCCCCCEEEEECCCCHHHHHH
Confidence 3467889999988874 8999998532 6899999999999999999998 999999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccch--------hhccCCCCCCCccc-cccccc-
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHS--------AVRVGSWPNLPWLH-TDSWVK- 616 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~--------~~~~~~~~~~~~~~-~~~~~~- 616 (2280)
+|||+++|+++||+++.++.++ +.++++++++++++++..... .+.... .....+. ......
T Consensus 97 ~lA~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 168 (544)
T 3o83_A 97 FFALLKAGVVVLNALYSHRQYE-------LNAFIKQIQPKLLIGSRQHEVFSNNQFIDSLHDVN-LSPEIILMLNHQATD 168 (544)
T ss_dssp HHHHHHHTCEEEECCTTCCHHH-------HHHHHHHHCCSEEEEETTSGGGSSSHHHHHHHHTT-CCCSEEEEETCCTTS
T ss_pred HHHHHHhCcEEecCCCCCCHHH-------HHHHHHhcCeeEEEEccccccccHHHHHHHHhhcc-cCcceEEEecCCccc
Confidence 9999999999999999999888 889999999999999865421 111000 1111100 000000
Q ss_pred ----cccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHH
Q 037878 617 ----NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLI 692 (2280)
Q Consensus 617 ----~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~ 692 (2280)
.................++|+|||+|||||||+||||++||+++.+.+......+++.++|++++++|++|.+++.
T Consensus 169 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~~ 248 (544)
T 3o83_A 169 FGLLDWIETPAETFVDFSSTPADEVAFFQLSGGSTGTPKLIPRTHNDYDYSVRASAEICGLNSNTRLLCALPAPHNFMLS 248 (544)
T ss_dssp EEHHHHHHSCCSSCCCCCCCCTTSEEEEEECCC--CCCCEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHH
T ss_pred cchhhhhhcccccccccccCCccceEEEEECCCcccCCceEEechHHHHHHHHHHHHHhCCCCCCeEEEecCcceEeecc
Confidence 0000001111122345689999999999999999999999999999999999999999999999999999999876
Q ss_pred H-HHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCC
Q 037878 693 G-GLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPV 771 (2280)
Q Consensus 693 ~-~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l 771 (2280)
. .++.++..|+++++.+. .+|..+++.++++++|++.++|+++..+++...... .++++||.+++|||++
T Consensus 249 ~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-----~~~~~lr~i~~gG~~l 319 (544)
T 3o83_A 249 SPGALGVLHAGGCVVMAPN----PEPLNCFSIIQRHQVNMASLVPSAVIMWLEKAAQYK-----DQIQSLKLLQVGGASF 319 (544)
T ss_dssp SSHHHHHHHTTCEEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHHHHTTTH-----HHHTTCCEEEEESSCC
T ss_pred hHHHHHHHHcCCEEEECCC----CCHHHHHHHHHHHCCCEEEechHHHHHHHhchhhcc-----ccCCcceEEEEcCCCC
Confidence 4 68899999999998764 289999999999999999999999999887654332 4578999999999999
Q ss_pred CHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCC-CCceEEEEcCCCCcccC
Q 037878 772 RQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQND-PDVDIRIVNPETSEEIG 850 (2280)
Q Consensus 772 ~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~-pg~~v~Ivd~~~~~~~~ 850 (2280)
++++.+++.+.+ ++.++|.||+||+++.++..... .....+++|+|+ ++++++|+|+++ ..+
T Consensus 320 ~~~~~~~~~~~~------~~~~~~~YG~TE~~~~~~~~~~~---------~~~~~~~~G~p~~~~~~~~i~d~~~--~~~ 382 (544)
T 3o83_A 320 PESLARQVPEVL------NCKLQQVFGMAEGLVNYTRLDDS---------DEQIFTTQGRPISSDDEIKIVDEQY--REV 382 (544)
T ss_dssp CHHHHTHHHHHH------CSEEEEEEECTTSCEEECCTTSC---------HHHHHHCCCEESCTTCEEEEECTTS--CBC
T ss_pred CHHHHHHHHHHh------CCcEEeeeccccccceeecCCCc---------hhhccCCCceecCCCcEEEEECCCC--CCC
Confidence 999999999875 56899999999998654432111 012246789996 899999999765 446
Q ss_pred CCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHH
Q 037878 851 EPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVE 929 (2280)
Q Consensus 851 p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE 929 (2280)
|+|++|||+|+||+++.||||+|+.|+++|.. ++||||||+|+++ ||.|+|+||+|||||++|+||+|.|||
T Consensus 383 ~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~-------~g~~~TGDlg~~~~dG~l~~~GR~dd~ik~~G~~v~p~eIE 455 (544)
T 3o83_A 383 PEGEIGMLATRGPYTFCGYYQSPEHNSQVFDE-------DNYYYSGDLVQRTPDGNLRVVGRIKDQINRGGEKIASEEIE 455 (544)
T ss_dssp CTTCCEEEEEECTTSCSCCTTCHHHHHHHBCT-------TCCEEEEEEEEECTTSCEEEEEEEC----------------
T ss_pred CCCCeeEEEEecCCcchhhcCChhhhhhhCCC-------CCCeEcCCEEEEcCCCCEEEEeecCCEEEeCCEEECHHHHH
Confidence 89999999999999999999999999999954 4899999999997 999999999999999999999999999
Q ss_pred HHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHH-HHHHhcCcceeEEEEe
Q 037878 930 KTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKT-RVVEEHGVTVASVKLI 1008 (2280)
Q Consensus 930 ~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~-~l~~~~~~~~~~~~lv 1008 (2280)
++|.+||+|.+ |+|++++++..++ ..+++++.. +......++.+.+++ +|+. +++| ..++
T Consensus 456 ~~l~~~p~V~~---a~vv~~~~~~~g~---------~~~a~vv~~---~~~~~~~~l~~~~~~~~l~~-~~~P---~~i~ 516 (544)
T 3o83_A 456 KLILLHPEVMH---AALVAIVDEQFGE---------KSCAFIVSR---NPELKAVVLRRHLMELGIAQ-YKLP---DQIK 516 (544)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHhCCCccE---EEEEeccCCCCCc---------eEEEEEEeC---CCCCCHHHHHHHHHhCCCCc-ccCC---cEEE
Confidence 99999999976 8888887765432 223333321 222233455666666 4543 5544 4455
Q ss_pred cCCCccCCCCcccchHHHHHHhhcC
Q 037878 1009 KPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1009 ~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
.+++||+|+||||||++|++++.+.
T Consensus 517 ~v~~lP~t~~GKi~r~~L~~~~~~~ 541 (544)
T 3o83_A 517 LIESLPLTAVGKVDKKQLRSILNTS 541 (544)
T ss_dssp -------------------------
T ss_pred EeccCCCCCCCCCcHHHHHHHHhhc
Confidence 5699999999999999998886543
No 19
>3c5e_A Acyl-coenzyme A synthetase ACSM2A, mitochondrial; middle-chain acyl-COA synthetase, xenobiotic/medium-chain FA COA ligase; HET: ATP; 1.60A {Homo sapiens} PDB: 2vze_A 3b7w_A* 3day_A* 3eq6_A* 3eyn_A* 3gpc_A* 2wd9_A*
Probab=100.00 E-value=6e-62 Score=654.70 Aligned_cols=504 Identities=20% Similarity=0.252 Sum_probs=388.7
Q ss_pred CCHHHHHHhhccc---cccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHH
Q 037878 469 SSLDGYLKHWGTH---RITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVD 545 (2280)
Q Consensus 469 ~tl~~~l~~~a~~---~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~v 545 (2280)
.++.+++++++++ ...|+++|+.+.+.++. .+++||+||+++++++|+.|++.. |+++||+|+++++|++++++
T Consensus 38 ~~~~~~l~~~a~~~~a~~~p~~~al~~~~~~g~-~~~~Ty~el~~~~~~lA~~L~~~~--Gv~~gd~V~i~~~n~~e~~~ 114 (570)
T 3c5e_A 38 NFASDVLDHWADMEKAGKRPPSPALWWVNGKGK-ELMWNFRELSENSQQAANVLSGAC--GLQRGDRVAVVLPRVPEWWL 114 (570)
T ss_dssp CHHHHTHHHHHHHHHTTSSCCCEEEEEECSSSC-EEEEEHHHHHHHHHHHHHHHHTTT--CCCTTCEEEEECCSCHHHHH
T ss_pred cHHHHHHHHHHhhccccCCCCceEEEEEcCCCc-eeEEeHHHHHHHHHHHHHHHHHcc--CCCCCCEEEEEcCCCHHHHH
Confidence 3456788777764 01389999988754332 268999999999999999998752 79999999999999999999
Q ss_pred HHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhcc--CCCCCCCc-ccccccc----ccc
Q 037878 546 AFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRV--GSWPNLPW-LHTDSWV----KNS 618 (2280)
Q Consensus 546 a~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~--~~~~~~~~-~~~~~~~----~~~ 618 (2280)
++|||+++|+++||+++.++.++ +.++++++++++++++......+.. ...+.... +..+... ...
T Consensus 115 ~~lA~~~~Ga~~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 187 (570)
T 3c5e_A 115 VILGCIRAGLIFMPGTIQMKSTD-------ILYRLQMSKAKAIVAGDEVIQEVDTVASECPSLRIKLLVSEKSCDGWLNF 187 (570)
T ss_dssp HHHHHHHHTCEEEECCTTCCHHH-------HHHHHHHHTCSEEEEETTTHHHHHHHGGGCTTCCEEEEESSSCCTTSEEH
T ss_pred HHHHHHHcCeEEEecCCCCCHHH-------HHHHHHhcCCeEEEechHHHHHHHHHhhcCCceeEEEEecccCccccccH
Confidence 99999999999999999999888 8899999999999998765433221 01111111 1111000 000
Q ss_pred cccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHH-HHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHH
Q 037878 619 KNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIH-NVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGL 695 (2280)
Q Consensus 619 ~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~-~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i 695 (2280)
.+.. ...........++|++||+|||||||.||||+++|+.+.+ ..... ..+++.++|++++++|++|+++++..+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~-~~~~~~~~d~~~~~~p~~~~~~~~~~~ 266 (570)
T 3c5e_A 188 KKLLNEASTTHHCVETGSQEASAIYFTSGTSGLPKMAEHSYSSLGLKAKMDA-GWTGLQASDIMWTISDTGWILNILCSL 266 (570)
T ss_dssp HHHHHHSCSCCCCCCCBTTSEEEEEECCCSSSSCCEEEEEHHHHHHHHHHHT-TTTSCCTTCEEEECCCTTSHHHHHHTT
T ss_pred HHHhhcccccccccCCCCCCcEEEEECCCCCCCCCEEEechHHHHhhhhhhh-hhcCCCCCceEEEcCchHHHHHHHHHH
Confidence 0000 0111112345689999999999999999999999994432 34343 667889999999999999999987788
Q ss_pred HHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHH
Q 037878 696 FTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTT 775 (2280)
Q Consensus 696 ~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l 775 (2280)
+.++..|+++++.+...+ +|..+++.++++++|++.++|+++..+.+. .....++++||.+++|||++++++
T Consensus 267 ~~~l~~G~~~~~~~~~~~--~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~------~~~~~~~~~lr~i~~gGe~l~~~~ 338 (570)
T 3c5e_A 267 MEPWALGACTFVHLLPKF--DPLVILKTLSSYPIKSMMGAPIVYRMLLQQ------DLSSYKFPHLQNCVTVGESLLPET 338 (570)
T ss_dssp HHHHHHTCEEEEECCSSC--CHHHHHHHHHHSCCCEEEECHHHHHHHHTS------CTTTCCCTTCCEEEEESSCCCHHH
T ss_pred HHHHHhCceEEEecCCCC--CHHHHHHHHHHhCCeEEeccHHHHHHHHhc------cccccccccceEEEEcCCcCCHHH
Confidence 999999999998865444 899999999999999999999999888753 112356889999999999999999
Q ss_pred HHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCe
Q 037878 776 VKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKE 855 (2280)
Q Consensus 776 ~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~ 855 (2280)
.++|.+.+ ++.++|.||+||+++.++..... ....+++|+|+|+++++|+|+++ ..+|.|+.
T Consensus 339 ~~~~~~~~------g~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~vG~p~~~~~v~i~d~~g--~~~~~G~~ 400 (570)
T 3c5e_A 339 LENWRAQT------GLDIRESYGQTETGLTCMVSKTM----------KIKPGYMGTAASCYDVQIIDDKG--NVLPPGTE 400 (570)
T ss_dssp HHHHHHHH------SCCCEEEEEETTTEEEEECCTTS----------CCCTTCCCEECTTCCEEEECTTS--CBCCTTCC
T ss_pred HHHHHHHh------CCchhhccchhhcccceecCccc----------ccCCCcccccCCCceEEEECCCC--CCCCCCCC
Confidence 99999875 46799999999998765543211 12247899999999999999875 45689999
Q ss_pred eEEEEc-----CCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHH
Q 037878 856 GEVWIS-----SPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVE 929 (2280)
Q Consensus 856 GEL~i~-----Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE 929 (2280)
|||+|+ |+++++||||+|+.|+++|. ++||||||+|+++ ||.|+|+||+|||||++|+||+|.|||
T Consensus 401 GEl~v~~~~~~g~~v~~GY~~~~~~t~~~f~--------~~~~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~V~p~eIE 472 (570)
T 3c5e_A 401 GDIGIRVKPIRPIGIFSGYVDNPDKTAANIR--------GDFWLLGDRGIKDEDGYFQFMGRADDIINSSGYRIGPSEVE 472 (570)
T ss_dssp EEEEEECSSBCCTTCCCEETTCHHHHHHTEE--------TTEEEEEEEEEECTTSCEEEEEEGGGCEEETTEEECHHHHH
T ss_pred CeeEEeccCCCCchhhccccCChhHhhhhhc--------CCccccceeEEEcCCceEEEEecCCCEEEECCEEECHHHHH
Confidence 999999 99999999999999999985 3899999999997 999999999999999999999999999
Q ss_pred HHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC--CCCHHHHHHHHHHHHHhcCcceeEEEE
Q 037878 930 KTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK--PVDKDVIENIKTRVVEEHGVTVASVKL 1007 (2280)
Q Consensus 930 ~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~--~~~~~l~~~l~~~l~~~~~~~~~~~~l 1007 (2280)
++|.+||+|.+ |+|++.+++..+ +.+.++++ ..++. ...+.+.+.+++.+.+.++.++.|..+
T Consensus 473 ~~l~~~p~V~~---a~Vv~~~~~~~g----------~~~~a~vv--~~~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i 537 (570)
T 3c5e_A 473 NALMEHPAVVE---TAVISSPDPVRG----------EVVKAFVV--LASQFLSHDPEQLTKELQQHVKSVTAPYKYPRKI 537 (570)
T ss_dssp HHHHTSTTEEE---EEEEEEEETTTE----------EEEEEEEE--ECGGGTTSCHHHHHHHHHHHHHHHSCGGGSCSEE
T ss_pred HHHHhCCCcce---EEEEeeeCCCCC----------eEEEEEEE--ECCcccCcchHHHHHHHHHHHHhhCccccCCcEE
Confidence 99999999975 888887765332 12222222 22221 122334556666666555444444455
Q ss_pred ecCCCccCCCCcccchHHHHHHhhc
Q 037878 1008 IKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1008 v~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
+.+++||+|+||||||++|++.+.+
T Consensus 538 ~~v~~lP~t~~GKi~R~~L~~~~~~ 562 (570)
T 3c5e_A 538 EFVLNLPKTVTGKIQRAKLRDKEWK 562 (570)
T ss_dssp EEESCCCBCTTCCBCHHHHHHHHTC
T ss_pred EEeccCCCCCCcCCcHHHHHHHHHh
Confidence 5569999999999999999988643
No 20
>3gqw_A Fatty acid AMP ligase; FAAL, E. coli, ATP-dependent binding enzyme family,, structural genomics, PSI-2, protein structure initiative; HET: ZZ9; 3.00A {Escherichia coli O6} PDB: 3pbk_A*
Probab=100.00 E-value=8.9e-62 Score=658.79 Aligned_cols=528 Identities=30% Similarity=0.470 Sum_probs=406.6
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
+++..++.+++++++.+. |+.+++ +......+++||+||+++++++|+.|+++ |+++||+|+++++|+++++
T Consensus 17 ~~~~~tl~~~l~~~a~~~--p~~~~~---~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~~~~~~~ 88 (576)
T 3gqw_A 17 YADFPTLVDALDYAALSS--AGMNFY---DRRCQLEDQLEYQTLKARAEAGAKRLLSL---NLKKGDRVALIAETSSEFV 88 (576)
T ss_dssp CSCCSSHHHHHHHHTTSS--CEEEEE---CTTSCEEEEEEHHHHHHHHHHHHHHHHHT---CCCTTCEEEEECCSSHHHH
T ss_pred cCCCCcHHHHHHHHhhCC--CCeEEe---CCCCCceeEEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCcHHHH
Confidence 566789999999998874 666554 32232347999999999999999999998 9999999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCccccccccccccccc
Q 037878 545 DAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWLHTDSWVKNSKNLL 622 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 622 (2280)
+++|||+++|+++||+++.++..+......++.++++++++++++++.+........ ..+....+.. .+ ....
T Consensus 89 ~~~lA~~~~G~~~vpl~~~~~~~~~~~~~~~l~~~l~~~~~~~ii~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~ 163 (576)
T 3gqw_A 89 EAFFACQYAGLVAVPLAIPMGVGQRDSWSAKLQGLLASCQPAAIITGDEWLPLVNAATHDNPELHVLSH-AW----FKAL 163 (576)
T ss_dssp HHHHHHHHTTCEEEEECCCSSSSSHHHHHHHHHHHHHHHCCSEEEECGGGHHHHHHHGGGCTTCEEEEH-HH----HHTS
T ss_pred HHHHHHHHhCCeEeecCCCCcccchhhHHHHHHHHHHhcCCCEEEecHHHHHHHHHhhccCCcceecch-hh----hhcc
Confidence 999999999999999999988433222234488999999999999987654432211 1111111100 00 0011
Q ss_pred cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH-cCCCCCcEEEEEcCchhhhhHHHHHHHHHHc
Q 037878 623 AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR-YKSTSKTVLVSWLPQYHDMGLIGGLFTAMVG 701 (2280)
Q Consensus 623 ~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~-~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~ 701 (2280)
.........+.++|++||+|||||||.||||+++|+++++.+...... +++.++|++++++|++|+++++..++.++..
T Consensus 164 ~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~g~~~~~~~~l~~ 243 (576)
T 3gqw_A 164 PEADVALQRPVPNDIAYLQYTSGSTRFPRGVIITHREVMANLRAISHDGIKLRPGDRCVSWLPFYHDMGLVGFLLTPVAT 243 (576)
T ss_dssp CCCCCCCCCCCTTSEEEEECTTSCSSSCCCEEEEHHHHHHHHHHHHHTTSCCCTTCCEEECCCTTSHHHHHHHTHHHHHT
T ss_pred cccccccCCCCCCCeEEEEeCCCCCCCCceEEeeHHHHHHHHHHhhhcccCCCCcceEEEcCCccccccHHHHHHHHHhc
Confidence 111122334568999999999999999999999999999988877654 7899999999999999999998888899999
Q ss_pred cceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHH
Q 037878 702 GSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVE 781 (2280)
Q Consensus 702 G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~ 781 (2280)
|+++++.++..+..+|..+++.++++++|++.++|+++..+.+..... .....+++++|.+++|||++++++.++|.+
T Consensus 244 g~~~~~~~~~~~~~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~~~~--~~~~~~l~~lr~~~~gg~~l~~~~~~~~~~ 321 (576)
T 3gqw_A 244 QLSVDYLRTQDFAMRPLQWLKLISKNRGTVSVAPPFGYELCQRRVNEK--DLAELDLSCWRVAGIGAEPISAEQLHQFAE 321 (576)
T ss_dssp TCCEEECCHHHHHHCTTHHHHHHHHTTCCEEEECHHHHHHHHHSCCHH--HHTTCCCTTCCEEEECSSCCCHHHHHHHHH
T ss_pred CceEEEcchhHhhhCHHHHHHHHHHhCCeEEEcCHHHHHHHHHHhccc--ccccCChhhhHhhhccCccCCHHHHHHHHH
Confidence 999998876554458999999999999999999999998776533221 112367899999999999999999999999
Q ss_pred HhcCCCCCCcccccccCccccccceecccCCCCcee----------------ec--CCCceeeccccCCCCCceEEEEcC
Q 037878 782 LTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPII----------------LD--WQGRVCCGYVDQNDPDVDIRIVNP 843 (2280)
Q Consensus 782 ~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~----------------~~--~~g~~~~g~vG~p~pg~~v~Ivd~ 843 (2280)
.+...+++++.++|.||+||++++++.......... .+ ........++|+|+|+++++|+|+
T Consensus 322 ~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~ 401 (576)
T 3gqw_A 322 CFRQVNFDNKTFMPCYGLAENALAVSFSDEASGVVVNEVDRDILEYQGKAVAPGAETRAVSTFVNCGKALPEHGIEIRNE 401 (576)
T ss_dssp HHGGGTCCGGGEEEEEECGGGSSEEEECCTTCCCCEEEEEHHHHHHHCBCCCCCTTCCCEEEEEBCCEECTTCEEEEECT
T ss_pred HHhhcCCCcccccccCCcccccceeecccccCCccccccchhhhcccCcccccCccccCccceeecCCcCCCCeEEEECC
Confidence 886666668899999999999988775432211000 00 001123357999999999999997
Q ss_pred CCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeee
Q 037878 844 ETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNV 923 (2280)
Q Consensus 844 ~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI 923 (2280)
++ ..+|.|++|||+|+||++++||||+|+.|++.|.+ |||||||+|+++||.|+|+||+|||||++|+||
T Consensus 402 ~g--~~~~~g~~GEl~v~g~~~~~gY~~~~~~~~~~~~~--------g~~~TGDl~~~~dG~l~~~GR~dd~ik~~G~~v 471 (576)
T 3gqw_A 402 AG--MPVAERVVGHICISGPSLMSGYFGDQVSQDEIAAT--------GWLDTGDLGYLLDGYLYVTGRIKDLIIIRGRNI 471 (576)
T ss_dssp TS--CBCCTTBCEEEEEESTTSCCCBTTCHHHHHHHHHH--------SCEEEEEEEEEETTEEEEEEETTTCEEETTEEE
T ss_pred CC--CCCCCCCeEEEEEeCccccccccCCccccccccCC--------CeeeccceEEEECCEEEEEecCcceEEECCEEE
Confidence 64 45589999999999999999999999998887643 899999999999999999999999999999999
Q ss_pred chHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCccee
Q 037878 924 YSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVA 1003 (2280)
Q Consensus 924 ~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 1003 (2280)
+|.|||++|.+||+|.+ ++|++..++ ......++... ........++++.+++++.+.+++|..
T Consensus 472 ~p~eIE~~l~~~p~V~~---~~vv~~~~~------------~~~~~~~~~~~-~~~~~~~~~l~~~l~~~l~~~~~~p~~ 535 (576)
T 3gqw_A 472 WPQDIEYIAEQEPEIHS---GDAIAFVTA------------QEKIILQIQCR-ISDEERRGQLIHALAARIQSEFGVTAA 535 (576)
T ss_dssp CHHHHHHHHTTSSSCCT---TSEEEEECT------------TSCEEEEEECC-CCCHHHHHHHHHHHHHHHHHHHSCCEE
T ss_pred CHHHHHHHHHhCccccc---ccEEEEEcC------------CccEEEEEEEe-cCchhHHHHHHHHHHHHHHHHhCCcee
Confidence 99999999999999975 444443321 11122222211 111112256788888888777887754
Q ss_pred EEEEecCCCccCCCCcccchHHHHHHhhcCC
Q 037878 1004 SVKLIKPRTMSKTTSGKIKRFECLKQFVDGT 1034 (2280)
Q Consensus 1004 ~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~ 1034 (2280)
+.++..++||+|+||||||++|+++|.+..
T Consensus 536 -i~~v~~~~lP~t~~GKi~r~~l~~~~~~~~ 565 (576)
T 3gqw_A 536 -IDLLPPHSIPRTSSGKPARAEAKKRYQKAY 565 (576)
T ss_dssp -EEEECSSCSCBCTTSSBCHHHHHHHHHHHH
T ss_pred -EEEECCCCcCcCCCccchHHHHHHHHHHHh
Confidence 445555699999999999999999987643
No 21
>3rix_A Luciferase, luciferin 4-monooxygenase; oxidoreductase, photoprotein, luminescence, aspulvinone, natural product extracts; HET: 923; 1.70A {Photinus pyralis} SCOP: e.23.1.1 PDB: 1ba3_A 1lci_A* 4e5d_A* 3ies_A* 3iep_A* 3ier_A* 4g36_A* 4g37_A* 3qya_A
Probab=100.00 E-value=6.6e-63 Score=663.32 Aligned_cols=501 Identities=17% Similarity=0.205 Sum_probs=308.5
Q ss_pred CCCHHHHHHhhccccccCCceEEEE-EcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTW-INEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDA 546 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~-~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va 546 (2280)
..++.+++++.+++. |+++|++. .+..+. +++||+||+++++++|++|+++ |+++||+|+++++|+++++++
T Consensus 19 ~~tl~~~l~~~a~~~--p~~~a~~a~~~~~~~--~~~Ty~el~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~~~~ 91 (550)
T 3rix_A 19 DGTAGEQLHKAMKRY--ALVPGTIAFTDAHIE--VNITYAEYFEMSVRLAEAMKRY---GLNTNHRIVVCSENSLQFFMP 91 (550)
T ss_dssp CSCHHHHHHHHHHHH--HTSTTCEEEEETTTC--CEEEHHHHHHHHHHHHHHHHHH---TCCTTCEEEEECSSCTTTHHH
T ss_pred cCCHHHHHHHHHHhC--CCCceEEEeeecCCC--cEeEHHHHHHHHHHHHHHHHHh---CCCCCCEEEEEcCCcccHHHH
Confidence 468999999988875 67777542 232222 6899999999999999999998 999999999999999999999
Q ss_pred HHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCCCcc-cccc---------c
Q 037878 547 FFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNLPWL-HTDS---------W 614 (2280)
Q Consensus 547 ~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~~~~-~~~~---------~ 614 (2280)
+|||+++|+++||+++.++.++ +.++++++++++++++......+... ..+....+ ..+. +
T Consensus 92 ~lA~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (550)
T 3rix_A 92 VLGALFIGVAVAPANDIYNERE-------LLNSMNISQPTVVFVSKKGLQKILNVQKKLPIIQKIIIMDSKTDYQGFQSM 164 (550)
T ss_dssp HHHHHHHTCEEEECCTTCCHHH-------HHHHHHHHCCSEEEECGGGHHHHHHHHHHCTTCCEEEETTCSSCBTTBCBH
T ss_pred HHHHHHcCCEEeecCCcCCHHH-------HHHHHHhcCCeEEEEcHHHHHHHHHHHhhCCCcceEEEEcCCccccCcccH
Confidence 9999999999999999999988 88999999999999987654322110 00111100 0000 0
Q ss_pred ccccccccc-----ccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCcEEEEEcCch
Q 037878 615 VKNSKNLLA-----ENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR---YKSTSKTVLVSWLPQY 686 (2280)
Q Consensus 615 ~~~~~~~~~-----~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~---~~~~~~d~~l~~~pl~ 686 (2280)
......... ....+.....++|+|||+|||||||.||||++||+++++.+...... +++.+++++++++|++
T Consensus 165 ~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~~~~~~~~~~~~~~~~~~~~~~~~l~~~p~~ 244 (550)
T 3rix_A 165 YTFVTSHLPPGFNEYDFVPESFDRDKTIALIMNSSGSTGLPKGVALPHRTACVRFSHARDPIFGNQIIPDTAILSVVPFH 244 (550)
T ss_dssp HHHHHHHCCTTCCTTTCCCCCCCTTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECSCTT
T ss_pred HHHhhccccccccccccCCCCCCCCCCEEEEEECCCcccCcchhhhhHHHHHHHHHHhhhhhccccCCCCcEEEEechHH
Confidence 000000000 00011112245789999999999999999999999999888776554 4678899999999999
Q ss_pred hhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEE
Q 037878 687 HDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMV 766 (2280)
Q Consensus 687 h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~ 766 (2280)
|+++++ .++.++..|+++++.+. .++..+++.++++++|++.++|+++..+.+.... ...++++||.+++
T Consensus 245 ~~~g~~-~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~l~~lr~i~~ 314 (550)
T 3rix_A 245 HGFGMF-TTLGYLICGFRVVLMYR----FEEELFLRSLQDYKIQSALLVPTLFSFFAKSTLI-----DKYDLSNLHEIAS 314 (550)
T ss_dssp SHHHHH-HHHHHHHHTCEEEECSS----CCHHHHHHHHHHTTCSEEEECHHHHHHHHHCCGG-----GGSCCTTCCEEEE
T ss_pred HHHHHH-HHHHHHHcCCEEEEeCC----CCHHHHHHHHHHcCCeEEEeCcHHHHHHHhCccc-----cccCcccccEEEE
Confidence 999984 57788999999998753 3899999999999999999999999988764322 2357899999999
Q ss_pred ecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCC
Q 037878 767 AAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETS 846 (2280)
Q Consensus 767 gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~ 846 (2280)
|||++++++.++|.+.++ ...++|.||+||+++.++..... ....+++|+|+|+++++|+|++++
T Consensus 315 gG~~l~~~~~~~~~~~~~-----~~~v~~~YG~TE~~~~~~~~~~~----------~~~~~~vG~~~~~~~~~i~d~~~~ 379 (550)
T 3rix_A 315 GGAPLSKEVGEAVAKRFH-----LPGIRQGYGLTETTSAILITPEG----------DDKPGAVGKVVPFFEAKVVDLDTG 379 (550)
T ss_dssp CSSCCCHHHHHHHHHHTT-----CSCCEEEEECGGGSSEEEECCTT----------CCCTTEEEEECTTCEEEEECTTTC
T ss_pred ecCCCCHHHHHHHHHHcC-----CCccccccCcCccccceecCCCC----------CCCCCCcccccCCcEEEEEeCCCC
Confidence 999999999999998752 33488999999999876654321 123477899999999999998765
Q ss_pred cccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeech
Q 037878 847 EEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYS 925 (2280)
Q Consensus 847 ~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~ 925 (2280)
. .+|+|+.|||+|+||++++||||+|+.|++.|.. +|||||||+|+++ ||.++|+||+|||||++|+||+|
T Consensus 380 ~-~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~~~~-------~g~~~TGDl~~~~~dG~l~~~GR~dd~ik~~G~~v~p 451 (550)
T 3rix_A 380 K-TLGVNQRGELCVRGPMIMSGYVNNPEATNALIDK-------DGWLHSGDIAYWDEDEHFFIVDRLKSLIKYKGYQVAP 451 (550)
T ss_dssp C-BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCT-------TSCEEEEEEEEECTTCCEEEC----------------
T ss_pred c-CCCCCCCeEEEEeCCCcchhhcCChhhhhhhcCC-------CCCeecCcEEEEeCCceEEEEecchheeEECCEEECH
Confidence 4 4579999999999999999999999999998853 4899999999997 99999999999999999999999
Q ss_pred HHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEE
Q 037878 926 ADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASV 1005 (2280)
Q Consensus 926 ~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~ 1005 (2280)
.|||++|.+||+|.+ |+|++++++..+ +.+.++++.+.. .....++++++++++++..++++.
T Consensus 452 ~eIE~~l~~~p~V~~---a~vv~~~~~~~g----------~~~~a~vv~~~~-~~~~~~~l~~~~~~~l~~~~~~~~--- 514 (550)
T 3rix_A 452 AELESILLQHPNIFD---AGVAGLPDDDAG----------ELPAAVVVLEHG-KTMTEKEIVDYVASQVTTAKKLRG--- 514 (550)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHHHHHHHhCCCcce---EEEEEeecCCCC----------ceEEEEEEecCC-CCCCHHHHHHHHHHhcccccccCC---
Confidence 999999999999976 888888776433 222233322211 112335677888888876544332
Q ss_pred EEecCCCccCCCCcccchHHHHHHhhc
Q 037878 1006 KLIKPRTMSKTTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1006 ~lv~~~~lP~t~sGKvdR~~L~~~~~~ 1032 (2280)
.++.+++||+|+||||||++|++++.+
T Consensus 515 ~i~~v~~lP~t~~GKi~r~~L~~~~~~ 541 (550)
T 3rix_A 515 GVVFVDEVPKGLTGKLDARKIREILIK 541 (550)
T ss_dssp ---------------------------
T ss_pred ceEEEeecCCCCCcceeHHHHHHHHHh
Confidence 244459999999999999999888654
No 22
>1v25_A Long-chain-fatty-acid-COA synthetase; ligase, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ANP; 2.30A {Thermus thermophilus} SCOP: e.23.1.1 PDB: 1ult_A* 1v26_A*
Probab=100.00 E-value=1.7e-62 Score=657.52 Aligned_cols=506 Identities=21% Similarity=0.278 Sum_probs=357.4
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+++++++++. |+++|+.+.+.++ .+++||+||+++++++|+.|+++ |+++||+|+++++|++++++++|
T Consensus 18 ~~l~~~l~~~a~~~--p~~~a~~~~~~~~--~~~~Ty~el~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~~~~~l 90 (541)
T 1v25_A 18 LNLWDFLERAAALF--GRKEVVSRLHTGE--VHRTTYAEVYQRARRLMGGLRAL---GVGVGDRVATLGFNHFRHLEAYF 90 (541)
T ss_dssp CCTHHHHHHHHHHS--TTCEEEEECTTSC--EEEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSHHHHHHHH
T ss_pred CCHHHHHHHHHHhC--CCceEEEEecCCC--CceecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCcHHHHHHHH
Confidence 57889999888764 8999998653322 36899999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhcc--CCCCCCC-cccccccc----cccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRV--GSWPNLP-WLHTDSWV----KNSKNL 621 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~--~~~~~~~-~~~~~~~~----~~~~~~ 621 (2280)
||+++|+++||+++.++.++ +.++++++++++++++......+.. ...+... .+..+... ....+.
T Consensus 91 A~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (541)
T 1v25_A 91 AVPGMGAVLHTANPRLSPKE-------IAYILNHAEDKVLLFDPNLLPLVEAIRGELKTVQHFVVMDEKAPEGYLAYEEA 163 (541)
T ss_dssp HHHHTTCEEEECCTTSCHHH-------HHHHHHHHTCSEEEECGGGHHHHHHHGGGCSSCCEEEESSSCCCTTCEEHHHH
T ss_pred HHHhcCcEEEecCcccCHHH-------HHHHHHhCCCcEEEEChhHHHHHHHHHhhCCCccEEEEecCCCCcccccHHHH
Confidence 99999999999999999888 8899999999999998765432211 0111111 11111000 000000
Q ss_pred ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHH--HHHcCCCCCcEEEEEcCchhhhhHHHHHHHHH
Q 037878 622 LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLM--RKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAM 699 (2280)
Q Consensus 622 ~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~--~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L 699 (2280)
.... .......++|++||+|||||||.||||++||+++++..... ...++++++|++++++|++|++++ ..++.++
T Consensus 164 ~~~~-~~~~~~~~~~~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~d~~l~~~p~~h~~~~-~~~~~~l 241 (541)
T 1v25_A 164 LGEE-ADPVRVPERAACGMAYTTGTTGLPKGVVYSHRALVLHSLAASLVDGTALSEKDVVLPVVPMFHVNAW-CLPYAAT 241 (541)
T ss_dssp CCSC-CCCCCCCTTSEEEEEEECSSSSSCEEEEEEHHHHHHHHHHTTSTTTTCCCTTCEEEECSCTTSHHHH-THHHHHH
T ss_pred hhcc-CCcccCCCCCcEEEEECCCCCCCCcEeeeehHHHHHHHhhhhhcccccCCCCCEEEEeccchhhhHH-HHHHHHH
Confidence 0000 11134567899999999999999999999999998776552 345678899999999999999997 4577889
Q ss_pred HccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHH
Q 037878 700 VGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRF 779 (2280)
Q Consensus 700 ~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~ 779 (2280)
+.|+++++.++ . .+|..+++.++++++|++.++|+++..+.+...... .++++||.+++|||++++++.++|
T Consensus 242 ~~G~~~v~~~~-~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~-----~~l~~lr~i~~gG~~l~~~~~~~~ 313 (541)
T 1v25_A 242 LVGAKQVLPGP-R--LDPASLVELFDGEGVTFTAGVPTVWLALADYLESTG-----HRLKTLRRLVVGGSAAPRSLIARF 313 (541)
T ss_dssp HHTCEEEECTT-C--CSHHHHHHHHHHTTCCEEEECHHHHHHHHHHHHHHT-----CCCSSCCEEEECSSCCCHHHHHHH
T ss_pred hcCceEEeeCC-C--CCHHHHHHHHHhcCeeEEecchHHHHHHHhhhhccC-----CcchhccEEEECCCCCCHHHHHHH
Confidence 99999998653 2 389999999999999999999999999887655432 468899999999999999999999
Q ss_pred HHHhcCCCCCCcccccccCccccccceecccCCCCceeec-CCCceeeccccCCCCCceEEEEcCCCCcccCCC-CCeeE
Q 037878 780 VELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILD-WQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEP-GKEGE 857 (2280)
Q Consensus 780 ~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~-~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~-G~~GE 857 (2280)
+.+ +++++|.||+||++.+++............ .......+++|+|+|+++++|+|+++. .+.+. |+.||
T Consensus 314 -~~~------g~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~p~~~~~~~i~d~~g~-~~~~~~~~~GE 385 (541)
T 1v25_A 314 -ERM------GVEVRQGYGLTETSPVVVQNFVKSHLESLSEEEKLTLKAKTGLPIPLVRLRVADEEGR-PVPKDGKALGE 385 (541)
T ss_dssp -HHT------TCEEEEEEECGGGSSEEEECCCCGGGTTSCHHHHHHHHTSCBEECTTCEEEEECTTSC-BCCSSSCCCEE
T ss_pred -HHh------CCceeecccccccccceecccccccccccCccccccccCCCCCcCCCcEEEEECCCCC-CCCCCCCcceE
Confidence 543 568999999999997766542210000000 000012467999999999999998753 33223 36899
Q ss_pred EEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhcc
Q 037878 858 VWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESST 936 (2280)
Q Consensus 858 L~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p 936 (2280)
|+|+||+++.||||+|+.|+++|.. +|||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.+||
T Consensus 386 l~v~g~~v~~GY~~~p~~t~~~f~~-------~g~~~TGDlg~~d~dG~l~~~GR~~d~ik~~G~~v~p~eIE~~l~~~p 458 (541)
T 1v25_A 386 VQLKGPWITGGYYGNEEATRSALTP-------DGFFRTGDIAVWDEEGYVEIKDRLKDLIKSGGEWISSVDLENALMGHP 458 (541)
T ss_dssp EEEESTTSBSSCBTCHHHHHTTBCT-------TSCEEEEEEEEECTTCCEEEEEESSCEEEETTEEEEHHHHHCC-----
T ss_pred EEEeCcchhccccCChhhhhhhccC-------CCCeEcCCEEEEcCCceEEEeecccceeeeCCEEECHHHHHHHHHhCC
Confidence 9999999999999999999999863 4899999999997 9999999999999999999999999999999999
Q ss_pred CCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHH-HHHHhcCcceeEEEEecCCCccC
Q 037878 937 EHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKT-RVVEEHGVTVASVKLIKPRTMSK 1015 (2280)
Q Consensus 937 ~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~-~l~~~~~~~~~~~~lv~~~~lP~ 1015 (2280)
+|.+ |+|++++++..+ +.+.++++. .......+++.+++++ +|+. +++|. .++.+++||+
T Consensus 459 ~V~~---a~Vv~~~~~~~~----------~~~~a~vv~--~~~~~~~~~l~~~~~~~~L~~-~~~P~---~i~~v~~lP~ 519 (541)
T 1v25_A 459 KVKE---AAVVAIPHPKWQ----------ERPLAVVVP--RGEKPTPEELNEHLLKAGFAK-WQLPD---AYVFAEEIPR 519 (541)
T ss_dssp --------CEEEEECSSSS----------EEEEECC---------------------CCCT-TTSCS---BC--------
T ss_pred CceE---EEEEEecCCCcC----------ceEEEEEEE--CCCCCCHHHHHHHHHhccCcc-ccCCc---EEEEeCCCCC
Confidence 9976 888888775432 122222221 1111222455666665 4543 55554 3444589999
Q ss_pred CCCcccchHHHHHHhhc
Q 037878 1016 TTSGKIKRFECLKQFVD 1032 (2280)
Q Consensus 1016 t~sGKvdR~~L~~~~~~ 1032 (2280)
|+||||||++|++++.+
T Consensus 520 t~~GKi~r~~L~~~~~~ 536 (541)
T 1v25_A 520 TSAGKFLKRALREQYKN 536 (541)
T ss_dssp ------CCTTHHHHSTT
T ss_pred CCccCeeHHHHHHHHHH
Confidence 99999999999998754
No 23
>3l8c_A D-alanine--poly(phosphoribitol) ligase subunit 1; structural genomics, DLTA, ATP-binding, cytoplasm, nucleotide-binding; 2.41A {Streptococcus pyogenes serotype M6} PDB: 3lgx_A*
Probab=100.00 E-value=2.1e-62 Score=655.28 Aligned_cols=504 Identities=16% Similarity=0.231 Sum_probs=387.8
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++++++. |+++|+.+.+ +++||+||+++++++|++|++. |+++||+|+++++|++++++++
T Consensus 3 ~~~l~~~l~~~a~~~--p~~~a~~~~~------~~~Ty~el~~~~~~lA~~L~~~---g~~~gd~V~i~~~n~~~~~~~~ 71 (521)
T 3l8c_A 3 LKDMIDSIEQFAQTQ--ADFPVYDCLG------ERRTYGQLKRDSDSIAAFIDSL---ALLAKSPVLVFGAQTYDMLATF 71 (521)
T ss_dssp CCCHHHHHHHHHHHS--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHT---CCCTTCCEEEEECSSHHHHHHH
T ss_pred HHHHHHHHHHHHHHC--CCCcceecCC------CeecHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCCHHHHHHH
Confidence 357889999988874 8999987532 5899999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCcccccccccccccccccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVV 627 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 627 (2280)
|||+++|+++||+++..+.++ +.++++++++++++++.+..... .....+......... .......
T Consensus 72 lA~~~~G~v~vpl~~~~~~~~-------l~~il~~~~~~~ii~~~~~~~~~-----~~~~~~~~~~~~~~~--~~~~~~~ 137 (521)
T 3l8c_A 72 VALTKSGHAYIPVDVHSAPER-------ILAIIEIAKPSLIIAIEEFPLTI-----EGISLVSLSEIESAK--LAEMPYE 137 (521)
T ss_dssp HHHHHTTCCEEEEETTSCHHH-------HHHHHHHSCCSEEEESSCCCSCC-----TTSEEEEHHHHHHHH--HHTCCCC
T ss_pred HHHHHhCCEEEecCccccHHH-------HHHHHHhCCCCEEEecCcccccc-----ccCcccchhhhhhcc--cccCCcc
Confidence 999999999999999999988 88999999999999986543221 111111111111000 0011111
Q ss_pred ccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH--cCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceE
Q 037878 628 CFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR--YKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTA 705 (2280)
Q Consensus 628 ~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~--~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~ 705 (2280)
......++|++||+|||||||.||||++||+++.+.+.+.... ++..++++++++.|++|+.++ ..++.++..|+++
T Consensus 138 ~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~-~~~~~~l~~G~~~ 216 (521)
T 3l8c_A 138 RTHSVKGDDNYYIIFTSGTTGQPKGVQISHDNLLSFTNWMIEDAAFDVPKQPQMLAQPPYSFDLSV-MYWAPTLALGGTL 216 (521)
T ss_dssp CSSCCCTTSEEEEEECCC---CCCEEEEEHHHHHHHHHHHHHCTTTCCCSSCEEECCSCTTSGGGH-HHHHHHHHTTCEE
T ss_pred cCCCCCCCCcEEEEEcCCCCCCCCEEEEehHHHHHHHHHHhhccccCCCCCCeEEecCCccHHHHH-HHHHHHHhcCCEE
Confidence 2334678999999999999999999999999999888777665 677899999999999999997 4678889999999
Q ss_pred EEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcC
Q 037878 706 ILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRP 785 (2280)
Q Consensus 706 vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~ 785 (2280)
++.+. ....++..+++.+.++++|++..+|+++..+...... ...+++++|.+++|||++++++.+++.+.+
T Consensus 217 ~~~~~-~~~~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~~~~lr~~~~gG~~l~~~~~~~~~~~~-- 288 (521)
T 3l8c_A 217 FALPK-ELVADFKQLFTTIAQLPVGIWTSTPSFADMAMLSDDF-----CQAKMPALTHFYFDGEELTVSTARKLFERF-- 288 (521)
T ss_dssp EECCG-GGTTCHHHHHHHHHHSCCSEEEECHHHHHHHHTSTTC-----STTTCTTCCEEEECSSCCCHHHHHHHHHHC--
T ss_pred EEcCH-HHhhCHHHHHHHHHHcCCcEEEeCCCHHHHHhhhhcc-----ccccCccceEEEEecccCCHHHHHHHHHHC--
Confidence 88754 3345899999999999999999999998877543221 235688999999999999999999999875
Q ss_pred CCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCc
Q 037878 786 FGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSA 865 (2280)
Q Consensus 786 ~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v 865 (2280)
+++.++|.||+||+++.++......... .....+++|+|+|+++++|+|+++ ..+|.|+.|||+|+||++
T Consensus 289 ---~~~~i~~~YG~TE~~~~~~~~~~~~~~~-----~~~~~~~vG~p~~~~~~~i~d~~g--~~~~~g~~GEl~v~g~~v 358 (521)
T 3l8c_A 289 ---PSAKIINAYGPTEATVALSAIEITREMV-----DNYTRLPIGYPKPDSPTYIIDEDG--KELSSGEQGEIIVTGPAV 358 (521)
T ss_dssp ---TTCEEEEEECCGGGSSCSEEEEECHHHH-----HHCSSCEEEEECTTSCEEEECTTS--CBCCTTCCEEEEEESTTS
T ss_pred ---CCceEEeCcCccHHhhhhceeecccccc-----cCCCccccccccCCCEEEEECCCc--CCCCCCCceEEEeccccc
Confidence 5788999999999988766432111000 011235689999999999999875 345799999999999999
Q ss_pred ccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHhccCCcCCcee
Q 037878 866 GIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCC 944 (2280)
Q Consensus 866 ~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~a 944 (2280)
+.||||+|+.|+++|.. .++++||||||+|+++ ||.++|+||+||+||++|+||+|.|||++|.+||+|.+ |
T Consensus 359 ~~GY~~~~~~t~~~f~~----~~~~~~~~TGDlg~~d~dG~l~~~GR~~d~i~~~G~~v~p~eIE~~l~~~p~V~~---a 431 (521)
T 3l8c_A 359 SKGYLNNPEKTAEAFFT----FKGQPAYHTGDIGSLTEDNILLYGGRLDFQIKYAGYRIELEDVSQQLNQSPMVAS---A 431 (521)
T ss_dssp CSCBTTCHHHHHHHEEE----ETTEEEEEEEEEEEECSSSCEEEEEEGGGBCC-----CBHHHHHHHHHTSTTEEE---E
T ss_pred ChhhcCCchHhhccCcC----CCCceeeeCCCEEEEeCCCeEEEeCcccceEeECCEEeCHHHHHHHHHcCCCcce---E
Confidence 99999999999999953 1356899999999997 99999999999999999999999999999999999965 7
Q ss_pred EEEeccccccccccccccCCCCceEEEEEEEecCCCCC----CHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcc
Q 037878 945 AVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV----DKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGK 1020 (2280)
Q Consensus 945 aVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~----~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGK 1020 (2280)
+|++.+++... +...+++++ ..++... ..++.+.+++.+.++++.++.|..++.+++||+|+|||
T Consensus 432 ~vv~~~~~~~~--------~~~~~a~vv---~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~P~~i~~v~~lP~t~~GK 500 (521)
T 3l8c_A 432 VAVPRYNKEHK--------VQNLLAYIV---VKDGVKERFDRELELTKAIKASVKDHMMSYMMPSKFLYRDSLPLTPNGK 500 (521)
T ss_dssp EEECCCSSSCC-----------CEEEEE---ECTTSGGGCSSHHHHHHHHHHHSGGGSCGGGSCSEEEECSSCCBCTTSS
T ss_pred EEEEeecCCCC--------ceEEEEEEE---ecCccccccccchhhHHHHHHHHHhhCccccCCeEEEEecccCCCCCcC
Confidence 78876543211 112233333 2333211 12345667777776666666666677789999999999
Q ss_pred cchHHHHHHhhcC
Q 037878 1021 IKRFECLKQFVDG 1033 (2280)
Q Consensus 1021 vdR~~L~~~~~~~ 1033 (2280)
|||++|++++.+.
T Consensus 501 idr~~L~~~~~~~ 513 (521)
T 3l8c_A 501 IDIKTLINEVNNR 513 (521)
T ss_dssp BCHHHHHHHTC--
T ss_pred ccHHHHhhhhhcC
Confidence 9999999987543
No 24
>2d1s_A Luciferase, luciferin 4-monooxygenase; alpha/beta, beta barrel, alpha+beta, riken structural genomics/proteomics initiative, RSGI; HET: SLU; 1.30A {Luciola cruciata} PDB: 2d1q_A* 2d1r_A* 2d1t_A*
Probab=100.00 E-value=7.8e-62 Score=651.57 Aligned_cols=501 Identities=18% Similarity=0.211 Sum_probs=388.8
Q ss_pred CCCCCCHHH-HHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhH
Q 037878 465 FPELSSLDG-YLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDF 543 (2280)
Q Consensus 465 ~~~~~tl~~-~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~ 543 (2280)
.|...++.+ ++...+++ + +++|+++.+ ++ +++||+||+++++++|+.|++. |+++||+|+++++|++++
T Consensus 21 ~p~~~~l~~~~l~~~~~~--~-~~~A~~~~~-~~---~~~Ty~el~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n~~e~ 90 (548)
T 2d1s_A 21 EEGSAGTQLRKYMERYAK--L-GAIAFTNAV-TG---VDYSYAEYLEKSCCLGKALQNY---GLVVDGRIALCSENCEEF 90 (548)
T ss_dssp CSSCHHHHHHHHHHHHHH--H-TCEEEEETT-TC---CEEEHHHHHHHHHHHHHHHHHH---TCCTTCEEEEECSSCTTT
T ss_pred CCCcCcHHHHHHHhhhcc--c-CCceEEEcC-CC---CEeeHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEeCCchhH
Confidence 344457888 77777665 5 889987532 12 5899999999999999999998 999999999999999999
Q ss_pred HHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCC-CCCcccccccc-----
Q 037878 544 VDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWP-NLPWLHTDSWV----- 615 (2280)
Q Consensus 544 ~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~-~~~~~~~~~~~----- 615 (2280)
++++|||+++|+++||+++.++.++ +.++++++++++++++......+... ..+ ....+..+...
T Consensus 91 ~~~~la~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 163 (548)
T 2d1s_A 91 FIPVIAGLFIGVGVAPTNEIYTLRE-------LVHSLGISKPTIVFSSKKGLDKVITVQKTVTTIKTIVILDSKVDYRGY 163 (548)
T ss_dssp HHHHHHHHHHTCEEEEECTTSCHHH-------HHHHHHHHCCSEEEECTTTHHHHHHHHHHSTTCCEEEETTCSSCBTTB
T ss_pred HHHHHHHHhhCCEEeccCCCCCHHH-------HHHHHHhcCCeEEEEcHHHHHHHHHHhcCCCCCCEEEEeCCccccccc
Confidence 9999999999999999999999888 88999999999999987654322110 001 01111111100
Q ss_pred ccccccccc--cc-cccCCC------CCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH---cCCCCCcEEEEEc
Q 037878 616 KNSKNLLAE--NV-VCFTES------QPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR---YKSTSKTVLVSWL 683 (2280)
Q Consensus 616 ~~~~~~~~~--~~-~~~~~~------~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~---~~~~~~d~~l~~~ 683 (2280)
....+.... .. ...... .++|++||+|||||||.||||++||+++.+.+...... ++++++|++++++
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~~~~~~~~~~~~~~~~~~~~~d~~l~~~ 243 (548)
T 2d1s_A 164 QCLDTFIKRNTPPGFQASSFKTVEVDRKEQVALIMNSSGSTGLPKGVQLTHENIVTRFSHARDPIYGNQVSPGTAVLTVV 243 (548)
T ss_dssp CBHHHHHHHTSCTTCCGGGCCCCCCCTTTCEEEEECCSSCSSSCCCEEEEHHHHHHHHHHHTCTTTSCCCCTTCEEEECS
T ss_pred ccHHHHHhcCccccCCcccccccccCCCCCEEEEEeCCCCCCCCCEEEecHHHHHHHHHHhhchhhccCCCccceEEEec
Confidence 000000000 00 011112 23899999999999999999999999999988877666 6788999999999
Q ss_pred CchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccE
Q 037878 684 PQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKF 763 (2280)
Q Consensus 684 pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~ 763 (2280)
|++|++++...++.++ .|+++++.+. .+|..+++.++++++|++.++|+++..+.+.... ...++++||.
T Consensus 244 p~~h~~g~~~~~~~~l-~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~-----~~~~l~~lr~ 313 (548)
T 2d1s_A 244 PFHHGFGMFTTLGYLI-CGFRVVMLTK----FDEETFLKTLQDYKCTSVILVPTLFAILNKSELL-----NKYDLSNLVE 313 (548)
T ss_dssp CTTSHHHHHHHHHHHH-TTCEEEECCC----CCHHHHHHHHHHTTEEEEEECHHHHHHHHHCSCG-----GGSCCTTCCE
T ss_pred cHHHHHHHHHHHHHHh-cCcEEEEcCC----CCHHHHHHHHHHcCCcEEEecHHHHHHHHhCccc-----ccccccceeE
Confidence 9999999876677888 9999988753 3899999999999999999999999988753221 2256889999
Q ss_pred EEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcC
Q 037878 764 LMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNP 843 (2280)
Q Consensus 764 l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~ 843 (2280)
+++|||++++++.++|.+.+ +++.++|.||+||++.+++..... ....+++|+|+|+++++|+|+
T Consensus 314 i~~gG~~l~~~~~~~~~~~~-----~~~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~G~~~~~~~~~i~d~ 378 (548)
T 2d1s_A 314 IASGGAPLSKEVGEAVARRF-----NLPGVRQGYGLTETTSAIIITPEG----------DDKPGASGKVVPLFKAKVIDL 378 (548)
T ss_dssp EEECSSCCCHHHHHHHHHHT-----TCSCCEEEEECGGGSSEEEECCTT----------CCCTTCCBEECTTCEEEEECT
T ss_pred EEEcCccCCHHHHHHHHHHc-----CCCceeeccccccccceeeecCcc----------cCCCCCCCccCCCceEEEEeC
Confidence 99999999999999999885 467899999999998776653211 123478899999999999996
Q ss_pred CCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCee
Q 037878 844 ETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRN 922 (2280)
Q Consensus 844 ~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~r 922 (2280)
+++. .+++|+.|||+|+||++++||||+|+.|+++|.. ++||||||+|+++ ||.++|+||+|||||++|+|
T Consensus 379 ~~~~-~~~~g~~GEl~v~g~~v~~GY~~~~~~t~~~f~~-------~g~~~TGDl~~~~~dG~l~~~GR~~d~ik~~G~~ 450 (548)
T 2d1s_A 379 DTKK-SLGPNRRGEVCVKGPMLMKGYVNNPEATKELIDE-------EGWLHTGDIGYYDEEKHFFIVDRLKSLIKYKGYQ 450 (548)
T ss_dssp TTCC-BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCT-------TSCEEEEEEEEECTTCCEEEEEEGGGCBCBTTCC
T ss_pred CcCc-cCCCCCCeEEEECCHHHhhhhcCChHHhhhcccC-------CcEEEccCEEEEcCCCeEEEeccccceEEECCEE
Confidence 5554 4579999999999999999999999999999853 4899999999997 99999999999999999999
Q ss_pred echHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-CCHHHHHHHHHHHHHhcCcc
Q 037878 923 VYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-VDKDVIENIKTRVVEEHGVT 1001 (2280)
Q Consensus 923 I~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-~~~~l~~~l~~~l~~~~~~~ 1001 (2280)
|+|.|||++|.+||+|.+ |+|++.+++..+ +.+.++++ ..++.. ..++++++++++|+. ++.|
T Consensus 451 v~p~eIE~~l~~~p~V~~---a~V~~~~~~~~g----------~~~~a~vv--~~~~~~~~~~~l~~~~~~~l~~-~~~p 514 (548)
T 2d1s_A 451 VPPAELESVLLQHPSIFD---AGVAGVPDPVAG----------ELPGAVVV--LESGKNMTEKEVMDYVASQVSN-AKRL 514 (548)
T ss_dssp BCHHHHHHHHHTSTTEEE---EEEEEEEETTTE----------EEEEEEEE--ECTTCCCCHHHHHHHHHTTSCG-GGSC
T ss_pred ECHHHHHHHHHhCCCccE---EEEEEEEcCCCC----------eeeEEEEE--EcCCCCCCHHHHHHHHHHhccc-cccc
Confidence 999999999999999975 889988775432 12222222 233322 335666666666654 3334
Q ss_pred eeEEEEecCCCccCCCCcccchHHHHHHhhcC
Q 037878 1002 VASVKLIKPRTMSKTTSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1002 ~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~ 1033 (2280)
.. .++.+++||+|+||||||++|++++.+.
T Consensus 515 ~~--~i~~v~~lP~t~~GKi~r~~L~~~~~~~ 544 (548)
T 2d1s_A 515 RG--GVRFVDEVPKGLTGKIDGRAIREILKKP 544 (548)
T ss_dssp TT--CEEECSSCCBCTTSCBCHHHHHHHHHSC
T ss_pred cc--cEEEccCCCCCCcchhHHHHHHHHHhhh
Confidence 31 2344599999999999999999988654
No 25
>3ivr_A Putative long-chain-fatty-acid COA ligase; structural genomics, PSI-2, protein S initiative, fatty acid synthesis; HET: GOL; 2.00A {Rhodopseudomonas palustris} SCOP: e.23.1.0
Probab=100.00 E-value=4.9e-62 Score=649.34 Aligned_cols=488 Identities=20% Similarity=0.259 Sum_probs=311.1
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAF 547 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~ 547 (2280)
..++.+++++++++. ||++|+.+.+ +++||+||+++++++|+.|+++ |+++||+|+++++|++++++++
T Consensus 5 ~~tl~~~l~~~a~~~--pd~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~~~~~~~~~~ 73 (509)
T 3ivr_A 5 DFTLADVYRRNAALF--PDRTAFMVDG------VRLTHRDYLARAERLASGLLRD---GVHTGDRVAILSQNCSEMIELI 73 (509)
T ss_dssp CCCHHHHHHHHHHHS--TTSEEEEETT------EEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSCHHHHHHH
T ss_pred cCCHHHHHHHHHHHC--CCceEEEECC------cEEcHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCCHHHHHHH
Confidence 458999999998874 8999998632 6899999999999999999998 9999999999999999999999
Q ss_pred HHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhcc--CCCCCCCc-cccccc---ccccccc
Q 037878 548 FGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRV--GSWPNLPW-LHTDSW---VKNSKNL 621 (2280)
Q Consensus 548 LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~--~~~~~~~~-~~~~~~---~~~~~~~ 621 (2280)
|||+++|+++||+++.+|.++ +.++++++++++++++......... ...+.... +...+. .......
T Consensus 74 lA~~~~Ga~~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 146 (509)
T 3ivr_A 74 GAVALIGAILLPVNYRLNADE-------IAFVLGDGAPSVVVAGTDYRDIVAGVLPSLGGVKKAYAIGDGSGPFAPFKDL 146 (509)
T ss_dssp HHHHHTTCEEEECCTTSCHHH-------HHHHHHHHCEEEEEECSTTHHHHHHHGGGCSSCCEEEESSCCCSSCEEGGGT
T ss_pred HHHHHhCCEEEecCCCCCHHH-------HHHHHHhcCceEEEECcchhhhHHhhhcccCCceEEEEcCCCCcChhhHhhc
Confidence 999999999999999999998 8899999999999998765443111 01111111 101000 0000000
Q ss_pred ccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHc
Q 037878 622 LAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVG 701 (2280)
Q Consensus 622 ~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~ 701 (2280)
............++|++||+|||||||.||||++||+++.+.+.+....++++++|++++++|++|++++...+...+.+
T Consensus 147 ~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~~~~ 226 (509)
T 3ivr_A 147 ASDTPFSAPEFGAADGFVIIHTAAVGGRPRGALISQGNLLIAQSSLVDAWRLTEADVNLGMLPLFHVTGLGLMLTLQQAG 226 (509)
T ss_dssp CCCSCCCCCCCCTTSEEEEEEEEC--CCEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHHHHHHHHHHT
T ss_pred cCCCCCCcCCCCccccEEEEeCCCCCCCCcEEEEehHHHHHHHHHHHHhhCCCCCcEEEEeCCCcchhHHHHHHHHHHhC
Confidence 11111223456789999999999999999999999999999999999999999999999999999999986544445555
Q ss_pred cceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHH
Q 037878 702 GSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVE 781 (2280)
Q Consensus 702 G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~ 781 (2280)
|++ ++.. . .+|..+++.++++++|++..+|+++..+++.. ...+++++|.++.+|++ ++.+++.+
T Consensus 227 g~~-~~~~--~--~~~~~~~~~i~~~~~t~~~~~p~~~~~l~~~~-------~~~~l~~lr~~~~~g~~---~~~~~~~~ 291 (509)
T 3ivr_A 227 GAS-VIAA--K--FDPAQAARDIEAHKVTVMAEFAPMLGNILDQA-------APAQLASLRAVTGLDTP---ETIERFEA 291 (509)
T ss_dssp CEE-EECS--S--CCHHHHHHHHHHHTCCEEEEETTHHHHHHHHC-------CGGGGTTCCEEEEECCH---HHHHHHHH
T ss_pred CcE-EEec--c--cCHHHHHHHHHHHCCcEEEecHHHHHHHHhcc-------cccchhhhheecccCCh---HHHHHHHH
Confidence 554 4443 2 38999999999999999999999999887653 12567899999999998 78888888
Q ss_pred HhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEc
Q 037878 782 LTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWIS 861 (2280)
Q Consensus 782 ~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~ 861 (2280)
.+ +++.++|.||+||++++++....... ...+|+|+++++++|+|+++ ..+|+|++|||+|+
T Consensus 292 ~~-----~~~~~~~~YG~TE~~~~~~~~~~~~~-----------~~~~G~p~~~~~~~i~d~~~--~~~~~g~~GEl~v~ 353 (509)
T 3ivr_A 292 TC-----PNATFWATFGQSETSGLSTFAPYRDR-----------PKSAGRPLFWRTVAVVDAED--RPLPPGEVGEIVLR 353 (509)
T ss_dssp HC-----TTCEEEEEEEEGGGTEEEEEEEGGGS-----------TTSCCEECTTCEEEEECTTS--CBCCTTCCEEEEEE
T ss_pred hc-----CCCeEEcccCccccccccccCccccC-----------CCcccccCCCcEEEEECCCC--CCCCCCCceEEEEe
Confidence 75 57899999999999987665432111 13489999999999999875 45689999999999
Q ss_pred CCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecC--CCeEEECCeeechHHHHHHHHhccCC
Q 037878 862 SPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRI--KDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 862 Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~--dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
||++++||||+|+.|+++|.+ |||||||+|+++ ||.++|+||+ ||+||++|+||+|.|||++|.+||+|
T Consensus 354 g~~~~~gY~~~~~~t~~~f~~--------g~~~TGDl~~~~~dG~l~~~GR~d~~d~ik~~G~~v~p~eiE~~l~~~p~V 425 (509)
T 3ivr_A 354 GPTVFKGYWNNAAATQHAFRN--------GWHHTGDMGRFDADGYLFYAGRAPEKELIKTGGENVYPAEVEGALKQHPAI 425 (509)
T ss_dssp STTSCCEETTCHHHHHHHTGG--------GSEEEEEEEEECTTSCEEEEEEC----------------------------
T ss_pred cCCccccccCCHHHhHHHhhc--------CCcccccEEEECCCceEEEeCCCCcceeEEECCEEECHHHHHHHHHhCCCc
Confidence 999999999999999999963 899999999997 9999999999 99999999999999999999999999
Q ss_pred cCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCC
Q 037878 939 IRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTT 1017 (2280)
Q Consensus 939 ~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~ 1017 (2280)
.+ |+|++.+++..++ ...++++. .++. ...+++.+.++++|+. +++| ..++.+++||+|+
T Consensus 426 ~~---a~vv~~~~~~~~~---------~~~a~v~~---~~~~~~~~~~l~~~l~~~L~~-~~~P---~~i~~v~~lP~t~ 486 (509)
T 3ivr_A 426 AD---AVVIGVPDPQWSE---------AIKAVCVC---KPGESIAADALAEFVASLIAR-YKKP---KHVVFVEALPKDA 486 (509)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ee---EEEEeccccccCc---------EEEEEEEe---CCCCCCCHHHHHHHHHhhCcc-cCCC---cEEEEecCCCCCC
Confidence 76 8888887754321 12222222 2222 2234667777777765 4444 4455569999999
Q ss_pred CcccchHHHHHHhhcC
Q 037878 1018 SGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1018 sGKvdR~~L~~~~~~~ 1033 (2280)
||||||++|++++.+.
T Consensus 487 ~GKidr~~Lr~~~~~~ 502 (509)
T 3ivr_A 487 KGAIDRAAVKTAHGQE 502 (509)
T ss_dssp ----------------
T ss_pred CCCccHHHHHHHHhhc
Confidence 9999999998886543
No 26
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}
Probab=100.00 E-value=9.2e-62 Score=694.88 Aligned_cols=516 Identities=22% Similarity=0.295 Sum_probs=333.0
Q ss_pred CCCCCCCCCCCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCC
Q 037878 460 LPGVEFPELSSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVP 539 (2280)
Q Consensus 460 ~~~~~~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~ 539 (2280)
++...+|...++.+++++++++. |+++|+++.+. + +++||+||+++++++|+.|+++ |+++||+|+++++|
T Consensus 52 ~~~~~~p~~~tl~~~l~~~a~~~--pd~~Al~~~~~-~---~~~TY~eL~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n 122 (979)
T 3tsy_A 52 LPDIYIPNHLSLHDYIFQNISEF--ATKPCLINGPT-G---HVYTYSDVHVISRQIAANFHKL---GVNQNDVVMLLLPN 122 (979)
T ss_dssp SCCCCCCTTSCHHHHHTTTGGGT--TTSEEEEETTT-C---CEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECSS
T ss_pred CCCCCCCCCCCHHHHHHHHHHhC--CCCeEEEECCC-C---cEEEHHHHHHHHHHHHHHHHHc---CCCCcCEEEEEeCC
Confidence 45556777889999999998874 89999975422 2 5899999999999999999998 99999999999999
Q ss_pred CHhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC-CCCCCcccc-------
Q 037878 540 GLDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS-WPNLPWLHT------- 611 (2280)
Q Consensus 540 s~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~-~~~~~~~~~------- 611 (2280)
++++++++|||+++|+++||+++.+|.++ +.++++++++++++++......+.... ......+..
T Consensus 123 s~e~~v~~lA~~~~Ga~~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (979)
T 3tsy_A 123 CPEFVLSFLAASFRGATATAANPFFTPAE-------IAKQAKASNTKLIITEARYVDKIKPLQNDDGVVIVCIDDNESVP 195 (979)
T ss_dssp CHHHHHHHHHHHHHTCEEEEECTTSCHHH-------HHHHHHHHTEEEEEECSTTTTTSHHHHHTSCCEEEECCCCTTSC
T ss_pred CHHHHHHHHHHHHcCCEEEeeCCCCCHHH-------HHHHHHHcCCeEEEEChHHHHHHHHHhhcCCceEEEeCCccccc
Confidence 99999999999999999999999999998 889999999999999876543221100 000111111
Q ss_pred --------ccccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH----HcCCCCCcEE
Q 037878 612 --------DSWVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK----RYKSTSKTVL 679 (2280)
Q Consensus 612 --------~~~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~----~~~~~~~d~~ 679 (2280)
.++..... ............++|++||+|||||||+||||+++|+++++.+..... .+++.+++++
T Consensus 196 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~~~~~d~~ 273 (979)
T 3tsy_A 196 IPEGCLRFTELTQSTT--EASEVIDSVEISPDDVVALPYSSGTTGLPKGVMLTHKGLVTSVAQQVDGENPNLYFHSDDVI 273 (979)
T ss_dssp CCTTEEEGGGTSSCCS--GGGGGSCCSCCCTTSEEECCBCCCSSSSCCBEEEEHHHHHHHHHHHHCSSSCSSCCCSSCEE
T ss_pred CCcccccHHHHhhccc--cccccCCcCCCCccceEEEEeCCCCCCCCeEEEechHHHHHHHHHHHHhhcccccCCCCCEE
Confidence 11100000 000112233467899999999999999999999999999988776543 3567889999
Q ss_pred EEEcCchhhhhHHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCC
Q 037878 680 VSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLS 759 (2280)
Q Consensus 680 l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~ 759 (2280)
++++|++|++++...++.++..|+++++.++ .++..+++.++++++|++..+|+++..+.+..... ..+++
T Consensus 274 l~~~p~~h~~~~~~~~~~~l~~G~~~v~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-----~~~l~ 344 (979)
T 3tsy_A 274 LCVLPMFHIYALNSIMLCGLRVGAAILIMPK----FEINLLLELIQRCKVTVAPMVPPIVLAIAKSSETE-----KYDLS 344 (979)
T ss_dssp EECSCSSSHHHHHHTHHHHHHHTCEEEECSS----CCHHHHHHHHHHHTCCEEEECHHHHHHHHHCGGGG-----TSCCT
T ss_pred EEECchHHHHHHHHHHHHHHhcCcEEEEeCC----CCHHHHHHHHHHhCCeEEEcHHHHHHHHHhCcccc-----CCCcc
Confidence 9999999999998888999999999998763 38899999999999999999999998887654332 25689
Q ss_pred CccEEEEecCCCCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccC-CCCceeecCCCceeeccccCCCCCceE
Q 037878 760 SMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYG-QGKPIILDWQGRVCCGYVDQNDPDVDI 838 (2280)
Q Consensus 760 ~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~-~~~~~~~~~~g~~~~g~vG~p~pg~~v 838 (2280)
+||.+++|||++++++.++|.+.+ ++++++|.||+||++.+++.... ...+ .....+++|+|+|++++
T Consensus 345 ~lr~~~~gg~~l~~~~~~~~~~~~-----~~~~l~~~YG~TE~~~~~~~~~~~~~~~------~~~~~~~~G~p~~~~~~ 413 (979)
T 3tsy_A 345 SIRVVKSGAAPLGKELEDAVNAKF-----PNAKLGQGYGMTEAGPVLAMSLGFAKEP------FPVKSGACGTVVRNAEM 413 (979)
T ss_dssp TCCEEEESSCCCCSSHHHHHHHHC-----TTCEEEECEECGGGCSEEEECGGGSSSC------CCCCTTCCCEECSSCEE
T ss_pred ceEEEEEcCCCCCHHHHHHHHHHC-----CCCeEEeeechhhhhHHHHhCCCCCCCc------cccCCCCcCcccCCcEE
Confidence 999999999999999999999875 57889999999999987664321 1111 12234788999999999
Q ss_pred EEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEE
Q 037878 839 RIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLII 917 (2280)
Q Consensus 839 ~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IK 917 (2280)
+|+|++++. .+|+|++|||+|+||++++||||+|+.|+++|.. ++||||||+|+++ ||.|+|+||+|||||
T Consensus 414 ~i~d~~~~~-~~~~g~~GEl~i~g~~v~~GY~~~p~~t~~~f~~-------~g~~~TGDl~~~~~dG~l~~~GR~dd~ik 485 (979)
T 3tsy_A 414 KIVDPDTGD-SLSRNQPGEICIRGHQIMKGYLNNPAATAETIDK-------DGWLHTGDIGLIDDDDELFIVDRLKELIK 485 (979)
T ss_dssp EEECTTSCC-BCCTTCCEEEEEESTTSCSEETTCHHHHHHHBCT-------TSCEEEEEEEEECTTSCEEEEEESCC---
T ss_pred EEEeCCCCC-CCCCCCccEEEEECCCccccccCChhhhhhhccC-------CCcEEcCCEEEEcCCceEEEecCCCCEEE
Confidence 999987654 4579999999999999999999999999999853 4899999999997 999999999999999
Q ss_pred ECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCC-CCCHHHHHHHHHHHHH
Q 037878 918 VAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGK-PVDKDVIENIKTRVVE 996 (2280)
Q Consensus 918 i~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~-~~~~~l~~~l~~~l~~ 996 (2280)
++|+||+|.|||++|.+||+|.+ |+|++++++..++ ..+++++. .++. ...+++.+.++++|+.
T Consensus 486 ~~G~~v~~~eIE~~l~~~p~V~~---~~Vv~~~~~~~g~---------~~~a~vv~---~~~~~~~~~~l~~~l~~~l~~ 550 (979)
T 3tsy_A 486 YKGFQVAPAELEALLIGHPDITD---VAVVAMKEEAAGE---------VPVAFVVK---SKDSELSEDDVKQFVSKQVVF 550 (979)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ECCEEECHHHHHHHHHhCCCcce---EEEEEecccCCCc---------EEEEEEEE---CCCCCCCHHHHHHHHHHhccc
Confidence 99999999999999999999976 8888877654321 22333332 1221 2234566777776654
Q ss_pred hcCcceeEEEEecCCCccCCCCcccchHHHHHHhhcCCCCCCCC
Q 037878 997 EHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQFVDGTLNTVPE 1040 (2280)
Q Consensus 997 ~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~~~~~~~~~lp~ 1040 (2280)
+++| ..++.+++||+|+||||||++|++++.++....+..
T Consensus 551 -~~~p---~~i~~v~~lP~t~~GKi~r~~L~~~~~~~~~~~~~~ 590 (979)
T 3tsy_A 551 -YKRI---NKVFFTESIPKAPSGKILRKDLRAKLANGLGSGMAS 590 (979)
T ss_dssp ------------------------------------------CC
T ss_pred -ccCC---eEEEEeCCcCcCCCCCeeHHHHHHHHHhhcCCcccc
Confidence 4444 445566999999999999999999988765544433
No 27
>3nyq_A Malonyl-COA ligase; A/B topology ababa sandwich beta-barrel adenylate-forming EN fold; HET: MCA AMP; 1.43A {Streptomyces coelicolor} PDB: 3nyr_A*
Probab=100.00 E-value=1.2e-61 Score=642.93 Aligned_cols=477 Identities=21% Similarity=0.268 Sum_probs=357.9
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.+.|++++++. .+|++|+.+.+ +++||+||+++++++|+.|. .||+|+++++|++++++++|
T Consensus 22 ~tl~~~l~~~a~~~-p~d~~Al~~~~------~~~Ty~eL~~~~~~~A~~L~--------~~~~V~i~~~~~~~~~~~~l 86 (505)
T 3nyq_A 22 SSLFPALSPAPTGA-PADRPALRFGE------RSLTYAELAAAAGATAGRIG--------GAGRVAVWATPAMETGVAVV 86 (505)
T ss_dssp --CCTTTSSCCCSG-GGGSEEEEETT------EEEEHHHHHHHHHHHHTTCC-----------CEEEECCSSHHHHHHHH
T ss_pred chhHHHHHHHHHhC-CCCCeEEEECC------eeeeHHHHHHHHHHHHhhcc--------CCCEEEEEcCCCHHHHHHHH
Confidence 34455666666664 24599998632 68999999999999998773 37899999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccccccccccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKNLLAENVVC 628 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 628 (2280)
||+++|+++||+|+.+|.++ +.++++++++++++++.+...... ......+..+. .......
T Consensus 87 a~~~~Ga~~vpl~~~~~~~~-------l~~il~~~~~~~vi~~~~~~~~~~---~~~~~~~~~~~--------~~~~~~~ 148 (505)
T 3nyq_A 87 AALLAGVAAVPLNPKSGDKE-------LAHILSDSAPSLVLAPPDAELPPA---LGALERVDVDV--------RARGAVP 148 (505)
T ss_dssp HHHHHTCCEEEECTTCCHHH-------HHHHHHHHCCSEEEECTTCCCCGG---GTTSEEEECCT--------TCCCCCC
T ss_pred HHHHhCCEEEEcCCCCCHHH-------HHHHHHHCCCCEEEECCccccchh---hcccccccccc--------ccccCCC
Confidence 99999999999999999998 889999999999999754211000 01111111100 0011112
Q ss_pred cCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEe
Q 037878 629 FTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILF 708 (2280)
Q Consensus 629 ~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~ 708 (2280)
.....++|++||+|||||||.||||+++|+++.+.+......+++.++|++++++|++|..+++..++.++..|+++++.
T Consensus 149 ~~~~~~~d~a~i~~TSGTTG~PKgV~~sh~~l~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~~~~~~~l~~G~~~~~~ 228 (505)
T 3nyq_A 149 EDGADDGDPALVVYTSGTTGPPKGAVIPRRALATTLDALADAWQWTGEDVLVQGLPLFHVHGLVLGILGPLRRGGSVRHL 228 (505)
T ss_dssp CCCCCTTSEEEEEEECCSSSSCEEEEEEHHHHHHHHHHHHHHHTCCTTCEEEECCCTTSHHHHTTTTHHHHHHTCEEEEC
T ss_pred CCCCCCCCeEEEEeCCCCcCCCCeEEEeHHHHHHHHHHHHHHhCCCCCcEEEEeccHHHHHHHHHHHHHHHhcCCEEEEC
Confidence 33467899999999999999999999999999999999999999999999999999999999888899999999999987
Q ss_pred CccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCC
Q 037878 709 SPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGL 788 (2280)
Q Consensus 709 ~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~ 788 (2280)
+. .++..+++.+ ++++|++.++|+++..+.+....... ...+++++|.+++|||++++++.+++.+.+
T Consensus 229 ~~----~~~~~~~~~i-~~~~t~~~~~P~~~~~l~~~~~~~~~--~~~~l~~lr~i~~gg~~l~~~~~~~~~~~~----- 296 (505)
T 3nyq_A 229 GR----FSTEGAAREL-NDGATMLFGVPTMYHRIAETLPADPE--LAKALAGARLLVSGSAALPVHDHERIAAAT----- 296 (505)
T ss_dssp SS----CCHHHHHHHH-TTTCCEEEECHHHHHHHHHHGGGCHH--HHHHHHHCSEEEECSSCCCHHHHHHHHHHH-----
T ss_pred CC----CChHHHHHHH-hhCCeEEEehHHHHHHHHHhhhcCch--hhcccccceEEEECCCCCCHHHHHHHHHhc-----
Confidence 53 3788889988 88999999999999998875443221 113577899999999999999999999875
Q ss_pred CCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccC--CCCCeeEEEEcCCCcc
Q 037878 789 SQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIG--EPGKEGEVWISSPSAG 866 (2280)
Q Consensus 789 ~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~--p~G~~GEL~i~Gp~v~ 866 (2280)
+++++|.||+||+++.++..... ....+++|+|+||++++|+|+++. ++. +.|++|||+|+||+++
T Consensus 297 -~~~~~~~YG~TE~~~~~~~~~~~----------~~~~~~vG~p~~~~~~~i~d~~g~-~~~~~~~g~~GEl~v~g~~v~ 364 (505)
T 3nyq_A 297 -GRRVIERYGMTETLMNTSVRADG----------EPRAGTVGVPLPGVELRLVEEDGT-PIAALDGESVGEIQVRGPNLF 364 (505)
T ss_dssp -SCCCEEEEEETTTEEEEECCTTS----------CCCTTCCCEECTTCEEEEC------CCCCCCSCCCEEEEEESTTSC
T ss_pred -CCeeecccchhhcccccccCCCC----------CCCCCCcccCCCCCEEEEECCCCC-CcccCCCCceEEEEEecCchh
Confidence 56899999999998766543211 123467899999999999998753 321 2389999999999999
Q ss_pred cccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecC-CCeEEECCeeechHHHHHHHHhccCCcCCcee
Q 037878 867 IGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRI-KDLIIVAGRNVYSADVEKTVESSTEHIRPGCC 944 (2280)
Q Consensus 867 ~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~-dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~a 944 (2280)
+||||+|+.|+++|.. ++||||||+|+++ ||.|+|+||+ |||||++|+||+|.|||++|.+||+|.+ |
T Consensus 365 ~GY~~~~~~t~~~f~~-------~g~y~TGDl~~~~~dG~l~~~GR~~d~~ik~~G~~v~~~eIE~~l~~~p~V~~---a 434 (505)
T 3nyq_A 365 TEYLNRPDATAAAFTE-------DGFFRTGDMAVRDPDGYVRIVGRKATDLIKSGGYKIGAGEIENALLEHPEVRE---A 434 (505)
T ss_dssp CEETTCHHHHHHTBCT-------TSCEEEEEEEEECTTSCEEEEEESSCCCEEETTEEECHHHHHHHHTTSTTEEE---E
T ss_pred hhhCCChhHhhhhhcC-------CCCCccCCeEEECCCccEEEeCCccCceEEeCCEEECHHHHHHHHHHCcCccE---E
Confidence 9999999999999964 4899999999997 9999999998 5999999999999999999999999975 8
Q ss_pred EEEeccccccccccccccCCCCceEEEEEEEecC-C-CCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccc
Q 037878 945 AVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRD-G-KPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIK 1022 (2280)
Q Consensus 945 aVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~-~-~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvd 1022 (2280)
+|++.+++..++ ..++++ ...+ + ....+++.++++++|+. +++| ..++.+++||+|+|||||
T Consensus 435 ~Vv~~~~~~~g~---------~l~a~v---v~~~~~~~~~~~~l~~~l~~~L~~-~~~P---~~i~~v~~lP~t~~GKi~ 498 (505)
T 3nyq_A 435 AVTGEPDPDLGE---------RIVAWI---VPADPAAPPALGTLADHVAARLAP-HKRP---RVVRYLDAVPRNDMGKIM 498 (505)
T ss_dssp EEEEEEETTTEE---------EEEEEE---EESSTTSCCCHHHHHHHHHHHTCG-GGSC---SEEEECSCCCC-------
T ss_pred EEEeeECCCCCc---------EEEEEE---EECCCCCCCCHHHHHHHHHhhCCC-CcCc---cEEEEECCCCCCCCcCee
Confidence 898887754321 122222 2232 2 22225666666666654 4444 445556999999999999
Q ss_pred hHHHHH
Q 037878 1023 RFECLK 1028 (2280)
Q Consensus 1023 R~~L~~ 1028 (2280)
|++|++
T Consensus 499 r~~L~~ 504 (505)
T 3nyq_A 499 KRALNR 504 (505)
T ss_dssp ------
T ss_pred HHhhcc
Confidence 998765
No 28
>2v7b_A Benzoate-coenzyme A ligase; benzoate oxidation, benzoate COA ligase; 1.84A {Burkholderia xenovorans}
Probab=100.00 E-value=1.8e-60 Score=637.42 Aligned_cols=491 Identities=22% Similarity=0.258 Sum_probs=368.4
Q ss_pred CCHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHH
Q 037878 469 SSLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFF 548 (2280)
Q Consensus 469 ~tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~L 548 (2280)
.++.++++++++ . |+++|+.+. + +++||+||+++++++|+.|+++ |+++||+|+++++|++++++++|
T Consensus 24 ~~~~~~l~~~~~-~--p~~~A~~~~---~---~~~Ty~el~~~~~~lA~~L~~~---Gv~~gd~V~i~~~n~~~~~~~~l 91 (529)
T 2v7b_A 24 NFAAYLFRLNET-R--AGKTAYIDD---T---GSTTYGELEERARRFASALRTL---GVHPEERILLVMLDTVALPVAFL 91 (529)
T ss_dssp CHHHHHHHHTGG-G--TTSEEEECS---S---CEEEHHHHHHHHHHHHHHHHHT---TCCTTCEEEEECCSSTHHHHHHH
T ss_pred eHHHHHHHhhhc-c--CCceEEEeC---C---CCccHHHHHHHHHHHHHHHHHc---CCCCCCEEEEEcCCcHHHHHHHH
Confidence 347888888887 4 899998743 1 5799999999999999999998 99999999999999999999999
Q ss_pred HHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC--CCCCC-C-cccccccc------ccc
Q 037878 549 GCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG--SWPNL-P-WLHTDSWV------KNS 618 (2280)
Q Consensus 549 A~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~--~~~~~-~-~~~~~~~~------~~~ 618 (2280)
||+++|+++||+++.++.++ +.++++++++++++++......+... ..+.. . .+..+... ...
T Consensus 92 A~~~~G~~~vpl~~~~~~~~-------l~~~l~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 164 (529)
T 2v7b_A 92 GALYAGVVPVVANTLLTPAD-------YVYMLTHSHARAVIASGALVQNVTQALESAEHDGCQLIVSQPRESEPRLAPLF 164 (529)
T ss_dssp HHHHHTCEEEECCTTCCHHH-------HHHHHHHHTCSEEEEEGGGHHHHHHHHHCC---CCEEEEECC------CCCBH
T ss_pred HHHHcCceEEecCcccCHHH-------HHHHHhccCCeEEEechhhhhHHHHHHhhccccCceEEEecccccccccccch
Confidence 99999999999999999888 88999999999999987654322110 00111 0 00000000 000
Q ss_pred cccc--cccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHH-HHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHH
Q 037878 619 KNLL--AENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGL-IHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGL 695 (2280)
Q Consensus 619 ~~~~--~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l-~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i 695 (2280)
.+.. ...........++|++||+|||||||.||||++||+++ .+........+++.++|++++++|++|++++...+
T Consensus 165 ~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~sh~~l~~~~~~~~~~~~~~~~~d~~~~~~p~~~~~g~~~~~ 244 (529)
T 2v7b_A 165 EELIDAAAPAAKAAATGCDDIAFWLYSSGSTGKPKGTVHTHANLYWTAELYAKPILGIAENDVVFSAAKLFFAYGLGNGL 244 (529)
T ss_dssp HHHHHTSCCCSSCCCCCTTSEEEEEEC-----CCCEEEEEHHHHHHHHHHTCCCCCCCCTTCEEEESSCTTSHHHHHHHT
T ss_pred hhhhccCCCcccccCCCCCCeEEEEECCCCCCCCceEEEEhhHHHHHHHHHhhhccCCCCCcEEEEeecHHHHHHHHHHH
Confidence 0000 01111223456899999999999999999999999998 56555545557788999999999999999987778
Q ss_pred HHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHH
Q 037878 696 FTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTT 775 (2280)
Q Consensus 696 ~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l 775 (2280)
+.++..|+++++.++ . .++..+++.++++++|++.++|+++..+++..... .....++|.+++|||++++++
T Consensus 245 ~~~l~~G~~~v~~~~-~--~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~-----~~~~~~lr~~~~gGe~l~~~~ 316 (529)
T 2v7b_A 245 TFPLSVGATAILMAE-R--PTADAIFARLVEHRPTVFYGVPTLYANMLVSPNLP-----ARADVAIRICTSAGEALPREI 316 (529)
T ss_dssp HHHHHHTCEEECCCS-C--CCHHHHHHHHHHSCCSEEEECHHHHHHHHTCTTCC-----CGGGCCCCEEEECSSCCCHHH
T ss_pred HHHHhcCcEEEEecC-C--CCHHHHHHHHHHhCCEEEEecHHHHHHHHhCcccc-----cccCCceEEEEEcCCCCCHHH
Confidence 889999999987643 2 38999999999999999999999988876432111 111237999999999999999
Q ss_pred HHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCe
Q 037878 776 VKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKE 855 (2280)
Q Consensus 776 ~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~ 855 (2280)
.++|.+.+ +++++|.||+||++.+++..... ....+++|+|+|+++++|+|+++ ..+|+|++
T Consensus 317 ~~~~~~~~------g~~i~~~YG~TE~~~~~~~~~~~----------~~~~~~~G~p~~~~~~~i~d~~g--~~~~~g~~ 378 (529)
T 2v7b_A 317 GERFTAHF------GCEILDGIGSTEMLHIFLSNRAG----------AVEYGTTGRPVPGYEIELRDEAG--HAVPDGEV 378 (529)
T ss_dssp HHHHHHHH------SCCEEEEEECTTTSSEEEECCTT----------CCCTTSCCEECTTCEEEEECTTS--CBCCTTSC
T ss_pred HHHHHHHh------CCceeeeEchhhcCceeeccccC----------CCccCCcccCCCCCEEEEECCCC--CCCCCCCc
Confidence 99999875 46799999999997654433211 12246789999999999999765 45589999
Q ss_pred eEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHHHHh
Q 037878 856 GEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKTVES 934 (2280)
Q Consensus 856 GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~~ 934 (2280)
|||+|+||+++.||||+|+.|+++|. ++||||||+|+++ ||.|+|+||+|||||++|+||+|.|||++|.+
T Consensus 379 GEl~v~g~~~~~gY~~~~~~t~~~f~--------~~~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eIE~~l~~ 450 (529)
T 2v7b_A 379 GDLYIKGPSAAVMYWNNREKSRATFL--------GEWIRSGDKYCRLPNGCYVYAGRSDDMLKVSGQYVSPVEVEMVLVQ 450 (529)
T ss_dssp EEEEEECTTCCCCBTTCHHHHHHHEE--------TTEEEEEEEEEECTTSCEEEEEEGGGCBC----CBCHHHHHHHHTT
T ss_pred cEEEEecCCcccccCCChHHHHHhhh--------cCCcccCceEEECCCccEEEeCccCCeEEECCEEECHHHHHHHHHh
Confidence 99999999999999999999999996 3899999999997 99999999999999999999999999999999
Q ss_pred ccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCcc
Q 037878 935 STEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMS 1014 (2280)
Q Consensus 935 ~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP 1014 (2280)
||+|.+ |+|++. ++..+ ....++ +...++....+.+.+.+++.+.+.++.++.|..++.+++||
T Consensus 451 ~p~V~~---~~vv~~-~~~~~----------~~~~a~--vv~~~~~~~~~~~~~~l~~~l~~~L~~~~~P~~i~~v~~lP 514 (529)
T 2v7b_A 451 HDAVLE---AAVVGV-DHGGL----------VKTRAF--VVLKREFAPSEILAEELKAFVKDRLAPHKYPRDIVFVDDLP 514 (529)
T ss_dssp STTEEE---EEEEEE-EETTE----------EEEEEE--EEECTTCCCCHHHHHHHHHHHHTTSCTTTSCSEEEEESCCC
T ss_pred CCCcce---EEEEEe-cCCCc----------eEEEEE--EEecCCCCcchhHHHHHHHHHHhhcchhhCCeEEEEeccCC
Confidence 999975 888876 33111 112222 22233322122234456666655554444444555568999
Q ss_pred CCCCcccchHHHHH
Q 037878 1015 KTTSGKIKRFECLK 1028 (2280)
Q Consensus 1015 ~t~sGKvdR~~L~~ 1028 (2280)
+|+|||+||++|++
T Consensus 515 ~t~~GKi~r~~L~~ 528 (529)
T 2v7b_A 515 KTATGKIQRFKLRE 528 (529)
T ss_dssp BCTTSCBCHHHHHC
T ss_pred CCCccchhHHhHhh
Confidence 99999999999864
No 29
>3ej6_A Catalase-3; heme, hydrogen iron, metal-binding, oxidoreductase, peroxidase; HET: NAG HEM; 2.30A {Neurospora crassa}
Probab=100.00 E-value=1.6e-61 Score=615.49 Aligned_cols=298 Identities=20% Similarity=0.241 Sum_probs=270.8
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+|+++|.+||||+|++|+|++++++++++++++|+ +|++|||++|||+++|+++ |+.+|+||||||||++ +|+
T Consensus 63 ErIPeR~vHAKG~gA~G~F~vt~d~s~~t~A~~f~~~Gk~tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~-eGn--- 138 (688)
T 3ej6_A 63 ERIPERVVHARGAGAHGIFTSYGDWSNITAASFLGAKDKQTPVFVRFSTVAGSRGSADTARDVHGFATRFYTD-EGN--- 138 (688)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSBCTTTCCCSTTBSTTCEEEEEEEEECSSSCTTCCTTSSSCCEEEEEEEET-TEE---
T ss_pred cCCcccccccCceEEEEEEEECCCchHhhhhHhhcCCCceeEEEEEecCCCCCCCCcccCCCCccEEEEEEcC-CCC---
Confidence 78999999999999999999999999999999996 6999999999999999865 9999999999999997 554
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhcc--------------Cc---chhhhhhhcccCCCccccceeeee
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKR--------------VP---HIRDAVWKSLRLSDSYAEMHYYSN 1849 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~p~s~~~~~y~s~ 1849 (2280)
|||||||+||||+||+++|++|+++++++|++.+++ +| |....+++.+++|.||++|+|||+
T Consensus 139 -~DlVgnN~PVFFirDp~kFpdfiha~k~~P~t~~~~~~~~~~~~wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~ 217 (688)
T 3ej6_A 139 -FDIVGNNIPVFFIQDAIRFPDLIHSVKPSPDNEVPQAATAHDSAWDFFSSQPSALHTLFWAMSGNGIPRSYRHMDGFGI 217 (688)
T ss_dssp -EEEEEESSSSCSCSSGGGHHHHHHHHSCBTTTTBSTTCCCSHHHHHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECC
T ss_pred -cccccccCCccccCCHHHHHHHHHhhccCCCcCCCChhhhhhHHHHHHHhChhhHHHHHHHhccCCCCCCcccCCcccc
Confidence 999999999999999999999999999988665543 34 334445677899999999999999
Q ss_pred eeEEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEE
Q 037878 1850 ICRLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQ 1929 (2280)
Q Consensus 1850 ~~~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ 1929 (2280)
|+|+|+|++|+.+||||||+|.+|+++++.+|+.+... +++|||++||+++|++|++++|+|+||
T Consensus 218 htf~~vn~~G~~~~VKfh~~p~~G~~~l~~~EA~~~~g---------------~dpD~l~~DL~~~I~~G~~p~w~l~vQ 282 (688)
T 3ej6_A 218 HTFRLVTEDGKSKLVKWHWKTKQGKAALVWEEAQVLAG---------------KNADFHRQDLWDAIESGNAPSWELAVQ 282 (688)
T ss_dssp SCEEEECTTSCEEEEEEEEEESSCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred cceEEEeCCCCEEEEEEEEEECCCCCCCCHHHHHHhhC---------------CCccHHHHHHHHHHhcCCCceEEEEEE
Confidence 99999999999999999999999999999888765422 246799999999999999999999999
Q ss_pred EeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchh
Q 037878 1930 IRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRS 2007 (2280)
Q Consensus 1930 ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~ 2007 (2280)
+++++|.+.++|+++|+||+|||+++|+++||+|+||+|++| ++|||++|+|+|+++||+||+ |||||+|.
T Consensus 283 v~~~~d~~~~~f~~~D~Tk~WPe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~lvpGI~~S~-------DplLq~R~ 355 (688)
T 3ej6_A 283 LIDEDKAQAYGFDLLDPTKFLPEEFAPLQVLGEMTLNRNPMNYFAETEQISFQPGHIVRGVDFTE-------DPLLQGRL 355 (688)
T ss_dssp EECGGGSSCSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECCC-------CHHHHHHH
T ss_pred EechhhhhhcCCCCCcCCeecCCccCcceEEEEEEEcCCccchhhhhhhcccCccccCCCcCCCC-------ChHhhhhh
Confidence 999999999999999999999999999999999999999998 899999999999999999999 99999999
Q ss_pred hHHHhhhHhhc-CCCCchhHHHhhhcccccccCCCCCc
Q 037878 2008 LIYEICQHLRN-GEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2008 ~~Y~~s~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
++|.+||++|+ |.+ ++|++|| .|.||+
T Consensus 356 fsY~dtqr~Rl~G~N--------~~qlPvN--~p~~~~ 383 (688)
T 3ej6_A 356 YSYLDTQLNRHRGPN--------FEQLPIN--RPVSGV 383 (688)
T ss_dssp HHHHHHHHHHHSSSC--------GGGSTTT--CCSSCC
T ss_pred hhhHHHHHhhccCCC--------hhhCCCC--CCCCCc
Confidence 99999999998 888 4666655 455543
No 30
>3ttv_A Catalase HPII; heme orientation, oxidoreductase; HET: HEM; 1.45A {Escherichia coli} PDB: 3ttt_A* 1gge_A* 1iph_A* 4ens_A* 3ttu_A* 3p9p_A* 4enq_A* 1p81_A* 3ttx_A* 4enw_A* 3ttw_A* 4ent_A* 1qws_A* 1cf9_A* 1p80_A* 1qf7_A* 4enu_A* 4enp_A* 1gg9_A* 1ggf_A* ...
Probab=100.00 E-value=1.2e-61 Score=618.36 Aligned_cols=298 Identities=20% Similarity=0.287 Sum_probs=271.4
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+|++||.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+||||||||++ +|
T Consensus 120 ErIPER~vHAKG~gA~G~F~vt~d~s~~t~A~~F~~~Gk~tPv~vRFStv~G~~gs~Dt~rD~RGfAvKFyt~-eG---- 194 (753)
T 3ttv_A 120 ERIPERIVHARGSAAHGYFQPYKSLSDITKADFLSDPNKITPVFVRFSTVQGGAGSADTVRDIRGFATKFYTE-EG---- 194 (753)
T ss_dssp CCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSCTTCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEET-TE----
T ss_pred cCCCccccCCCcceEEEEEEECCchhHHHhhhhhcCCCceeEEEEEecCCCCCCCCCccCCCCCcEEEEEEcC-CC----
Confidence 78999999999999999999999999999999996 6999999999999999865 9999999999999998 45
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhcc--------------Cc---chhhhhhhcccCCCccccceeeee
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKR--------------VP---HIRDAVWKSLRLSDSYAEMHYYSN 1849 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~p~s~~~~~y~s~ 1849 (2280)
+|||||||+||||+||+++|++|+++++++|++.+++ +| |....+++.+++|.||++|+|||+
T Consensus 195 n~DlVgnN~PVFFirDp~kFpdfiha~k~~P~t~~~~~~~~~~~~wdF~s~~PEs~h~~~~l~sdrg~P~Syr~m~g~g~ 274 (753)
T 3ttv_A 195 IFDLVGNNTPIFFIQDAHKFPDFVHAVKPEPHWAIPQGQSAHDTFWDYVSLQPETLHNVMWAMSDRGIPRSYRTMEGFGI 274 (753)
T ss_dssp EEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTCCCTTCCCSHHHHHHHHHCGGGHHHHHHHHSGGGSBSCGGGSCEECC
T ss_pred CcccccccCCccccCCHHHHHHHHHHhhcCCccCCCCcccchHHHHHHHHhCHHHHHHHHHHhccCCCCCCcccCCcccc
Confidence 4999999999999999999999999999988766553 33 344445566789999999999999
Q ss_pred eeEEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEE
Q 037878 1850 ICRLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQ 1929 (2280)
Q Consensus 1850 ~~~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ 1929 (2280)
|+|+|+|++|+.+||||||+|.+|+++++.+|+.+... +++|||++||+++|++|++++|+|+||
T Consensus 275 htf~~vn~~G~~~~VKfh~~p~~G~~~l~~~EA~~~~g---------------~dpD~l~~DL~~~I~~G~~p~w~l~vQ 339 (753)
T 3ttv_A 275 HTFRLINAEGKATFVRFHWKPLAGKASLVWDEAQKLTG---------------RDPDFHRRELWEAIEAGDFPEYELGFQ 339 (753)
T ss_dssp SCEEEECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHHTCCCEEEEEEE
T ss_pred cceEEEcCCCCEEEEEEEEEECCCCCCCCHHHHHHhhC---------------CCchHHHHHHHHHHhcCCCCeEEEEEE
Confidence 99999999999999999999999999999988776432 246799999999999999999999999
Q ss_pred EeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchh
Q 037878 1930 IRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRS 2007 (2280)
Q Consensus 1930 ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~ 2007 (2280)
+++++|.+.++|+++|+||+|||+++|+++||+|+||+|++| ++|||++|+|+|+++||+||+ |||||+|.
T Consensus 340 v~~~~d~~~~~f~~~D~TK~WPe~~~Pl~~VG~l~Lnrnp~n~fae~Eq~aF~P~~lvpGI~~S~-------DplLq~R~ 412 (753)
T 3ttv_A 340 LIPEEDEFKFDFDLLDPTKLIPEELVPVQRVGKMVLNRNPDNFFAENEQAAFHPGHIVPGLDFTN-------DPLLQGRL 412 (753)
T ss_dssp EEEGGGTTCSSSCTTCTTSCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECCC-------CHHHHHHH
T ss_pred eechhhhhcCCCCCccCCccCCCcCccceeeeEEEecCCCcchhhhhhcceeccccccCCcCCCC-------CcHhhhhh
Confidence 999999999999999999999999999999999999999998 899999999999999999999 99999999
Q ss_pred hHHHhhhHhhc-CCCCchhHHHhhhcccccccCCCCCc
Q 037878 2008 LIYEICQHLRN-GEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2008 ~~Y~~s~~~R~-~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
++|.+||++|+ |.+ ++|++|| .|.||+
T Consensus 413 fsY~dtqr~RlgG~N--------~~qlPvN--~p~~~~ 440 (753)
T 3ttv_A 413 YSYTDTQISRLGGPN--------FHEIPIN--RPTCPY 440 (753)
T ss_dssp HHHHHHHHHHHTSTT--------GGGSGGG--CCSSCC
T ss_pred hhhHHHHHHhccCCC--------cccCCCC--CCCCcc
Confidence 99999999999 777 4665555 555654
No 31
>1gwe_A Catalase; oxidoreductase, hdyrogen-peroxide:hydrogen peroxide oxidoreductase; HET: HEM; 0.88A {Micrococcus luteus} SCOP: e.5.1.1 PDB: 1gwh_A* 1hbz_A* 1gwf_A*
Probab=100.00 E-value=1.8e-61 Score=596.45 Aligned_cols=298 Identities=19% Similarity=0.312 Sum_probs=270.5
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCcc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSSL 1787 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~~ 1787 (2280)
+++++|.+||||+|++|+|++++++++++++++|++||+|||++|||+++|+++ |+.+|+|||||||+++ +| +
T Consensus 53 eripeR~vHAKG~ga~G~F~vt~di~~~t~A~~F~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG----n 127 (503)
T 1gwe_A 53 MNIPERRPHAKGSGAFGEFEVTEDVSKYTKALVFQPGTKTETLLRFSTVAGELGSPDTWRDVRGFALRFYTE-EG----N 127 (503)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSTTCEEEEEEEEECSSSCTTSCTTSSCCCEEEEEEEET-TE----E
T ss_pred CCCCCcccCCCcceEEEEEEECCchHHhhhhhhccCCCeeeEEEEeccCCCCCCCCcccCCcCceEEEEecC-CC----c
Confidence 688999999999999999999999999999999977999999999999999855 9999999999999997 44 4
Q ss_pred eeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEEE
Q 037878 1788 LDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRLF 1854 (2280)
Q Consensus 1788 ~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~~ 1854 (2280)
|||||||+||||++|+++|++|+++++++|++.++ .+| +....+.+.+++|.||++|+|||+|+|+|
T Consensus 128 ~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~ 207 (503)
T 1gwe_A 128 YDLVGNNTPIFFLRDPMKFTHFIRSQKRLPDSGLRDATMQWDFWTNNPESAHQVTYLMGPRGLPRTWREMNGYGSHTYLW 207 (503)
T ss_dssp EEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCCBCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEE
T ss_pred eeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHHHhChhhhhHHHHhhccCCCCCCcccccccccCceEE
Confidence 99999999999999999999999999998865443 344 44444567779999999999999999999
Q ss_pred EEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCC
Q 037878 1855 RFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIP 1934 (2280)
Q Consensus 1855 ~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~ 1934 (2280)
+|++|+.+||||||+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||+++++
T Consensus 208 vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~DL~~aI~~G~~p~w~l~VQl~~~~ 272 (503)
T 1gwe_A 208 VNAQGEKHWVKYHFISQQGVHNLSNDEATKIAG---------------ENADFHRQDLFESIAKGDHPKWDLYIQAIPYE 272 (503)
T ss_dssp ECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEEEEETT
T ss_pred EcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcC---------------CCccHHHHHHHHHHHcCCCCeEEEEEEeeCHH
Confidence 999999999999999999999999888776421 24679999999999999999999999999999
Q ss_pred CccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHHh
Q 037878 1935 QDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEI 2012 (2280)
Q Consensus 1935 d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~ 2012 (2280)
|.+..+|+++|+||+|||+++|+++||+|+||+|+++ ++|||++|+|+|+++||+||+ |||||+|+++|.+
T Consensus 273 d~~~~~~~~~D~Tk~WPe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~pS~-------DplLq~R~faY~d 345 (503)
T 1gwe_A 273 EGKTYRFNPFDLTKTISQKDYPRIKVGTLTLNRNPENHFAQIESAAFSPSNTVPGIGLSP-------DRMLLGRAFAYHD 345 (503)
T ss_dssp HHHHCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECCS-------CHHHHHHHHHHHH
T ss_pred HHhcCCCCCCcCceeCCcccCCceEEEEEEecCCCccccccccccccccccccCCcCCCC-------ChHHHHHHHHHHH
Confidence 9999999999999999999999999999999999988 899999999999999999999 9999999999999
Q ss_pred hhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2013 CQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2013 s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
|+++|+|.+ ++|.+|| .|-||+
T Consensus 346 s~r~Rlg~N--------~~qlPvN--~P~~~~ 367 (503)
T 1gwe_A 346 AQLYRVGAH--------VNQLPVN--RPKNAV 367 (503)
T ss_dssp HHHHHTCTT--------GGGSGGG--CCSSCC
T ss_pred HHHHhccCC--------cccCCcC--CCCCcc
Confidence 999999998 5666555 555554
No 32
>3ipl_A 2-succinylbenzoate--COA ligase; structural genomics, acyl-protein synthetase, PSI-2, protein structure initiative; 2.30A {Staphylococcus aureus subsp}
Probab=100.00 E-value=8.8e-60 Score=626.68 Aligned_cols=476 Identities=20% Similarity=0.229 Sum_probs=356.9
Q ss_pred CHHHHHHhhccccccCCceEEEEEcCCCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHHHHHHH
Q 037878 470 SLDGYLKHWGTHRITQKKTLFTWINEEGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFVDAFFG 549 (2280)
Q Consensus 470 tl~~~l~~~a~~~~~~d~~A~~~~~~~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~va~LA 549 (2280)
++.+++++++++. |+++|+.+.+ +++||+||+++++++|+.|+++ +||+|+++++|++++++++||
T Consensus 2 tl~~~l~~~a~~~--pd~~Al~~~~------~~~Ty~eL~~~~~~lA~~L~~~------~gd~V~i~~~n~~e~~~~~lA 67 (501)
T 3ipl_A 2 SLDFWLYKQAQQN--GHHIAITDGQ------ESYTYQNLYCEASLLAKRLKAY------QQSRVGLYIDNSIQSIILIHA 67 (501)
T ss_dssp -CCCHHHHHHHHH--TTSEEEECSS------CEEEHHHHHHHHHHHHHHHHTT------CCSEEEEECCSSHHHHHHHHH
T ss_pred CHHHHHHHHHHhc--CCceEEEeCC------cEEEHHHHHHHHHHHHHHHHHc------CCCEEEEEcCCCHHHHHHHHH
Confidence 4556788888774 8999997532 5899999999999999999754 899999999999999999999
Q ss_pred HHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccC-CCCCCCcccc----cc-----------
Q 037878 550 CMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVG-SWPNLPWLHT----DS----------- 613 (2280)
Q Consensus 550 ~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~-~~~~~~~~~~----~~----------- 613 (2280)
|+++|+++||+++.++.++ +.++++++++++++++.......... .......... ..
T Consensus 68 ~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~li~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 140 (501)
T 3ipl_A 68 CWLANIEIAMINTRLTPNE-------MTNQMRSIDVQLIFCTLPLELRGFQIVSLDDIEFAGRDITTNGLLDNTMGIQYD 140 (501)
T ss_dssp HHHTTCEEEECCTTSCHHH-------HHHHHHHTTCCEEEESSCCCCTTSEEEETTC-----------------------
T ss_pred HHHcCCEEEecCccCCHHH-------HHHHHHhcCCCEEEEccccccccccccccccceeeeeecccccccccccccccc
Confidence 9999999999999999988 88999999999999986544322100 0000000000 00
Q ss_pred -ccccccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHH
Q 037878 614 -WVKNSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLI 692 (2280)
Q Consensus 614 -~~~~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~ 692 (2280)
....................++|++||+|||||||.||||++||+++.+.+......+++.+++++++++|++|++++.
T Consensus 141 ~~~~~~~~~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgv~~th~~~~~~~~~~~~~~~~~~~d~~l~~~p~~~~~g~~ 220 (501)
T 3ipl_A 141 TSNETVVPKESPSNILNTSFNLDDIASIMFTSGTTGPQKAVPQTFRNHYASAIGCKESLGFDRDTNWLSVLPIYHISGLS 220 (501)
T ss_dssp ---------CCHHHHTCCCCCTTSEEEEEECCTTTSCCCEEEEEHHHHHHHHHHHHHHTCCCTTCEEEECSCTTSHHHHH
T ss_pred cchhhccccCCcccccccCCCCCCeEEEEECCCCCCCCcEEEEeHHHHHHHHHHHHHhhCCCccCEEEEeCcHHHHHHHH
Confidence 0000000000011122345789999999999999999999999999999999999999999999999999999999985
Q ss_pred HHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCC
Q 037878 693 GGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVR 772 (2280)
Q Consensus 693 ~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~ 772 (2280)
.++.++..|+++++.++ .+|..+++.++++++|++.++|+++..+.+..... ..+||.+++|||+++
T Consensus 221 -~~~~~l~~G~~~~~~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~--------~~~lr~i~~gG~~l~ 287 (501)
T 3ipl_A 221 -VLLRAVIEGFTVRIVDK----FNAEQILTMIKNERITHISLVPQTLNWLMQQGLHE--------PYNLQKILLGGAKLS 287 (501)
T ss_dssp -HHHHHHHHTCEEEECSS----CCHHHHHHHHHHSCCCEEEECHHHHHHHHHHTCCS--------CTTCCEEEECSSCCC
T ss_pred -HHHHHHHcCceEEeCCC----CCHHHHHHHHHHcCCcEEEchHHHHHHHHhcCCCC--------cCcccEEEEeCCCCC
Confidence 48889999999998763 38999999999999999999999999887653221 227999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCC
Q 037878 773 QTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEP 852 (2280)
Q Consensus 773 ~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~ 852 (2280)
+++.+++.+. +++++|.||+||++..++....... ....+++|+|+++++++|+|++ .
T Consensus 288 ~~~~~~~~~~-------~~~~~~~YG~TE~~~~~~~~~~~~~--------~~~~~~~G~p~~~~~~~i~d~~-------~ 345 (501)
T 3ipl_A 288 ATMIETALQY-------NLPIYNSFGMTETCSQFLTATPEML--------HARPDTVGMPSANVDVKIKNPN-------K 345 (501)
T ss_dssp HHHHHHHHHT-------TCCEEEEEEEGGGTEEEEEECHHHH--------HHCTTCCBEECTTCEEEEESCC-------S
T ss_pred HHHHHHHHHh-------CCCEeccccccccccceeecCcccc--------ccCCCCCCCCCCCcEEEEecCC-------C
Confidence 9999998863 5679999999999875543221100 1123678999999999999975 4
Q ss_pred CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 853 GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 853 G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
|+.|||+|+|+++++||+++|+.|++ |. +|||||||+|+++ ||.++|+||+|||||++|+||+|.|||++
T Consensus 346 ~~~GEl~v~g~~~~~gY~~~~~~t~~-~~--------~g~~~TGDl~~~~~~G~l~~~GR~dd~ik~~G~~v~p~eiE~~ 416 (501)
T 3ipl_A 346 EGHGELMIKGANVMNGYLYPTDLTGT-FE--------NGYFNTGDIAEIDHEGYVMIYDRRKDLIISGGENIYPYQIETV 416 (501)
T ss_dssp SCCEEEEEESTTSCSCCSBSTTCCCS-EE--------TTEEEEEEEEEECTTSCEEEEEECCCCEECSSCEECHHHHHHH
T ss_pred CCccEEEEeccchhhhhCcChhhcch-hc--------CCceecCCEEEEcCCCeEEEEccccceEEECCEEECHHHHHHH
Confidence 66899999999999999999999887 53 4899999999997 99999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCC
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPR 1011 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~ 1011 (2280)
|.+||+|.+ |+|++.+++..++ .+.++++ .. .....+++.+.++++|+. +++| ..++.++
T Consensus 417 l~~~p~V~~---~~vv~~~~~~~g~----------~~~a~v~--~~-~~~~~~~l~~~l~~~L~~-~~~P---~~i~~v~ 476 (501)
T 3ipl_A 417 AKQFPGISD---AVCVGHPDDTWGQ----------VPKLYFV--SE-SDISKAQLIAYLSKHLAK-YKVP---KHFEKVD 476 (501)
T ss_dssp HTTSTTEEE---EEEEEEEETTTEE----------EEEEEEE--ES-SCCCHHHHHHHHHHHSCG-GGSC---SEEEECS
T ss_pred HHhCCCccE---EEEEEEecccCCc----------eEEEEEE--eC-CCCCHHHHHHHHHhhCcc-ccCC---CEEEEec
Confidence 999999975 8888887754321 1222222 22 223335666667666654 4444 4455669
Q ss_pred CccCCCCcccchHHHHHHh
Q 037878 1012 TMSKTTSGKIKRFECLKQF 1030 (2280)
Q Consensus 1012 ~lP~t~sGKvdR~~L~~~~ 1030 (2280)
+||+|+||||||++|++..
T Consensus 477 ~lP~t~~GKi~R~~l~~~~ 495 (501)
T 3ipl_A 477 TLPYTSTGKLQRNKLYREG 495 (501)
T ss_dssp SCC----------------
T ss_pred ccCCCCCCCEeHHHHhhcc
Confidence 9999999999999987764
No 33
>1qwl_A KATA catalase; beta barrel, azide complex, oxyferryl complex, oxidoreductas; HET: HEM; 1.60A {Helicobacter pylori} SCOP: e.5.1.1 PDB: 1qwm_A* 2a9e_A* 2iqf_A*
Probab=100.00 E-value=3.6e-61 Score=594.18 Aligned_cols=298 Identities=20% Similarity=0.308 Sum_probs=270.3
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +|++|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 48 eripeR~vHAKG~ga~G~F~vt~di~~~t~A~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG---- 122 (505)
T 1qwl_A 48 ERIPERVVHAKGSGAYGTFTVTKDITKYTKAKIFSKVGKKTECFFRFSTVAGERGSADAVRDPRGFAMKYYTE-EG---- 122 (505)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTSCSSSSSCCEEEEEEEET-TE----
T ss_pred CCCCCccccCCcceeEEEEEECCCchHhhhchhccCCCceeeEEEEeccCCCCCCCCcccCCcCceEEEEecC-CC----
Confidence 68899999999999999999999999999999996 5899999999999999865 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||||||+||||++|+++|++|+++++++|++.++ .+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 123 n~DlVgnN~PVFfirD~~kFpd~iha~k~~p~t~~~d~~~~wdf~s~~PEs~h~~~~l~sdrg~P~syr~m~g~g~htf~ 202 (505)
T 1qwl_A 123 NWDLVGNNTPVFFIRDAIKFPDFIHTQKRDPQTNLPNHDMVWDFWSNVPESLYQVTWVMSDRGIPKSFRHMDGFGSHTFS 202 (505)
T ss_dssp EEEEEEESSSCCSCSSGGGHHHHHHHHSCCTTTCSCCHHHHHHHHHHCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEE
T ss_pred ceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHHHhChhHHHHHHHHhccCCCCCCcccccccccCcee
Confidence 499999999999999999999999999998865433 344 4444566777999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||++++
T Consensus 203 ~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~DL~~aI~~G~~p~w~l~VQl~~~ 267 (505)
T 1qwl_A 203 LINAKGERFWVKFHFHTMQGVKHLTNEEAAEIRK---------------HDPDSNQRDLFDAIARGDYPKWKLSIQVMPE 267 (505)
T ss_dssp EECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHT---------------TCTTHHHHHHHHHHHTTCCCEEEEEEEEEEG
T ss_pred EEcCCCCEEEEEEEEEeCCCcCCCCHHHHHHhcC---------------CCccHHHHHHHHHHHcCCCceEEEEEEeech
Confidence 9999999999999999999999999888776532 2467999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|....+|+++|+||+|||+++|+++||+|+||+|+++ +++||++|+|||+++||+||+ |||||+|+++|.
T Consensus 268 ~d~~~~~~~~~D~Tk~WPe~~~P~i~VG~L~Lnrnp~n~fae~EqlaF~P~~~vpGI~pS~-------DplLq~R~fsY~ 340 (505)
T 1qwl_A 268 EDAKKYRFHPFDVTKIWYTQDYPLMEVGIVELNKNPENYFAEVEQAAFTPANVVPGIGYSP-------DRMLQGRLFSYG 340 (505)
T ss_dssp GGTTTCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECCC-------CHHHHHHHHHHH
T ss_pred HHhhcCCCCCCcCCeeCCccCCCceEEEEEEECCCcccchhhhhhhhcCccccCCCcccCC-------ChhhhhHHhHHH
Confidence 99999999999999999999999999999999999888 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
+|+++|+|.+ ++|.+|| .|-||+
T Consensus 341 ds~r~Rlg~N--------~~qlPvN--~P~~~~ 363 (505)
T 1qwl_A 341 DTHRYRLGVN--------YPQIPVN--KPRCPF 363 (505)
T ss_dssp HHHHHHHCTT--------GGGSGGG--SCSSCC
T ss_pred HHHHHhccCC--------cccCCCC--CCCCcc
Confidence 9999999998 4665554 555554
No 34
>1a4e_A Catalase A; oxidoreductase, peroxidase; HET: HEM; 2.40A {Saccharomyces cerevisiae} SCOP: e.5.1.1
Probab=100.00 E-value=2.3e-61 Score=595.14 Aligned_cols=297 Identities=17% Similarity=0.248 Sum_probs=269.1
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 48 eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG---- 122 (488)
T 1a4e_A 48 ENIPQRNPHAHGSGAFGYFEVTDDITDICGSAMFSKIGKRTKCLTRFSTVGGDKGSADTVRDPRGFATKFYTE-EG---- 122 (488)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSSCTTCCSSSSSCCEEEEEEEET-TE----
T ss_pred CCCCccccCCCceEEEEEEEECCCchHhhhchhccCCCceeeEEEEeecCCCCCCCCCccCCcCceEEEEecC-CC----
Confidence 68899999999999999999999999999999996 5999999999999999855 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhc----------c--Cc---chhhhhhhcccCCCccccceeeeeee
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------R--VP---HIRDAVWKSLRLSDSYAEMHYYSNIC 1851 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~--~~---~~~~~~~~~~~~p~s~~~~~y~s~~~ 1851 (2280)
+|||||||+||||++|+++|++|+++.+++|++.++ . +| +....+.+.+++|.||++|+|||+|+
T Consensus 123 n~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~s~~~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~ht 202 (488)
T 1a4e_A 123 NLDWVYNNTPVFFIRDPSKFPHFIHTQKRNPQTNLRDADMFWDFLTTPENQVAIHQVMILFSDRGTPANYRSMHGYSGHT 202 (488)
T ss_dssp EEEEEEESSSSCSCSCTTHHHHHHHHHSCCTTTCSCCHHHHHHHHTSGGGGGGHHHHHHHHSGGGSBSCGGGCCEECCSC
T ss_pred ccceeeecCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHHhccCChHHhhHHHHhhccCCCCCCccccccccccc
Confidence 499999999999999999999999999998865443 3 55 44444667779999999999999999
Q ss_pred EEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEe
Q 037878 1852 RLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIR 1931 (2280)
Q Consensus 1852 ~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~ 1931 (2280)
|+|+|++|+.+||||||+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||++
T Consensus 203 f~~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~dL~~~I~~g~~p~w~l~vQl~ 267 (488)
T 1a4e_A 203 YKWSNKNGDWHYVQVHIKTDQGIKNLTIEEATKIAG---------------SNPDYCQQDLFEAIQNGNYPSWTVYIQTM 267 (488)
T ss_dssp EEEECTTSCEEEEEEEEEESSCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEEEE
T ss_pred eEEEcCCCCEEEEEEEEEECCCCCCCCHHHHHHhcC---------------CChhHHHHHHHHHHHcCCCCeEEEEEEee
Confidence 999999999999999999999999999888776432 24679999999999999989999999999
Q ss_pred eCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhH
Q 037878 1932 PIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLI 2009 (2280)
Q Consensus 1932 ~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~ 2009 (2280)
+++|.+..+|+++|+||+|||+++|+++||+|+||+|+++ ++|||++|+|+|+++||+||+ |||||+|+++
T Consensus 268 ~~~d~~~~~f~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~pS~-------D~lLq~R~fa 340 (488)
T 1a4e_A 268 TERDAKKLPFSVFDLTKVWPQGQFPLRRVGKIVLNENPLNFFAQVEQAAFAPSTTVPYQEASA-------DPVLQARLFS 340 (488)
T ss_dssp CHHHHHTSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEEECS-------CHHHHHHHHH
T ss_pred cHHHHhcCCCCCCCCCCcCCcccCCceEEEEEEecCCCcchhhhhhhHhcCcccccCCcCCCC-------ChHHHHHHHH
Confidence 9999999999999999999999999999999999999988 899999999999999999999 9999999999
Q ss_pred HHhhhHhhcCCCCchhHHHhhhcccccccCCCCC
Q 037878 2010 YEICQHLRNGEPLPESWRIFLEQSDVKVDLSGCP 2043 (2280)
Q Consensus 2010 Y~~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 2043 (2280)
|.+|+++|+|.+ ++|.+|| .|-||
T Consensus 341 Y~ds~r~Rlg~N--------~~qlPvN--~P~~~ 364 (488)
T 1a4e_A 341 YADAHRYRLGPN--------FHQIPVN--CPYAS 364 (488)
T ss_dssp HHHHHHHHTCTT--------GGGSGGG--SCTTS
T ss_pred HHHHHHHhcccc--------cccCCcC--CCCCc
Confidence 999999999988 4666555 55555
No 35
>2isa_A Catalase; peroxidase, heme, oxidoreductase, iron, hydrogen peroxide; HET: OMT HEM; 1.97A {Vibrio salmonicida} PDB: 1m85_A* 1mqf_A* 1nm0_A* 2cag_A* 2cah_A* 1e93_A* 1h7k_A* 1h6n_A* 3hb6_A*
Probab=100.00 E-value=3.6e-61 Score=594.21 Aligned_cols=298 Identities=22% Similarity=0.334 Sum_probs=270.0
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 45 eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG---- 119 (483)
T 2isa_A 45 EVIPERRMHAKGSGAYGTFTVTHDITKYTKAKIFSDIGKKTDMFARFSTVAGERGAADAERDIRGFSLKFYTE-EG---- 119 (483)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTSCSSCSSCCEEEEEEEET-TE----
T ss_pred CCCCcccccCCccEEEEEEEECCCchHhhhchhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecC-CC----
Confidence 68899999999999999999999999999999996 5899999999999999855 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||||||+||||++|+++|++|+++.+++|++.++ .+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 120 n~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~ 199 (483)
T 2isa_A 120 NWDLAGNNTPVFFLRDPLKFPDLNHAVKRDPRTNMRSAKNNWDFWTSLPEALHQVTIVMSDRGIPATYRHMHGFGSHTFS 199 (483)
T ss_dssp EEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCSBCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSSGGGSCEECCSCEE
T ss_pred ccceeeeCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHHHhChhHhhHHHHhhccCCCCCCcccccccccCcee
Confidence 499999999999999999999999999998865443 344 4444456777999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||++++
T Consensus 200 ~vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~dL~~aI~~g~~p~w~l~vQl~~~ 264 (483)
T 2isa_A 200 FINSDNERYWVKFHFVSQQGIKNLSDAEAGELVG---------------NDRESHQRDLLDSIDNQDFPKWTLKVQIMPE 264 (483)
T ss_dssp EECTTCCEEEEEEEEEESSCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEEEEEG
T ss_pred EEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcC---------------CChhHHHHHHHHHHHcCCCceEEEEEEeeCh
Confidence 9999999999999999999999999888776422 2467999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|....+|+++|+||+|||+++|+++||+|+||+|+++ ++|||++|+|+|+++||+||+ |||||+|+++|.
T Consensus 265 ~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~pS~-------D~lLq~R~faY~ 337 (483)
T 2isa_A 265 ADAATVPYNPFDLTKVWPHKDYPLIEVGEFELNRNPQNYFAEVEQAAFNPANVVPGISFSP-------DKMLQGRLFAYG 337 (483)
T ss_dssp GGGGTSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECCS-------CHHHHHHHHHHH
T ss_pred hhhhcCCCCCCCCCccCCcccCCceEEEEEEecCCCccchhhhhhhhcCcccCCCCcccCC-------ChHHHHHHHHHH
Confidence 99999999999999999999999999999999999988 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
+|+++|+|.+ ++|.+|| .|.||+
T Consensus 338 ds~r~Rlg~N--------~~qlPvN--~P~~~~ 360 (483)
T 2isa_A 338 DAQRYRLGVN--------HQHIPVN--APRCPV 360 (483)
T ss_dssp HHHHHHHCTT--------GGGSGGG--SCSSCC
T ss_pred HHHHHhhcCc--------ccccccC--CCCccc
Confidence 9999999998 4665555 555554
No 36
>2j2m_A Catalase; functional class, oxidoreductase; HET: HEM; 2.4A {Exiguobacterium oxidotolerans}
Probab=100.00 E-value=3.7e-61 Score=593.67 Aligned_cols=298 Identities=17% Similarity=0.270 Sum_probs=269.6
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 48 eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG---- 122 (491)
T 2j2m_A 48 ERVPERVVHARGFGAHGVFKVKNSMKKYTKAAFLQEEGTEVPVFARFSTVIHGTHSPETLRDPRGFSVKFYTE-EG---- 122 (491)
T ss_dssp CCCBCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSSCTTCCTTSCSCCEEEEEEEET-TE----
T ss_pred CCCCCccccCCcceeEEEEEECCcchHhhhchhccCCCccceeEeeccCCCCCCCCCcccCCcCceEEEEecC-Cc----
Confidence 68899999999999999999999999999999996 5899999999999999865 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||||||+||||++|+++|++|+++.+++|++.++ .+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 123 n~DlV~nN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~ 202 (491)
T 2j2m_A 123 NWDFVGNNLPVFFIRDAMKFPDMVHSLKPDPRTNIQDPDRYWDFMTLRPESTNMLMHIFTDEGIPASYRKMRGSSVHSFK 202 (491)
T ss_dssp EEEEEEESSSSCSCSSGGGHHHHHHHHSCCTTTCSCCHHHHHHHHHHSGGGHHHHHHHTSGGGSBSCGGGCCEECCSCEE
T ss_pred ceeeeecCCCccccCCHHHHHHHHHhcCCCCCCCCCCHHHHHHHHHhCchHHhHHHHHhccCCCCCChhhccCcccccee
Confidence 499999999999999999999999999998865433 344 4444456777899999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||++++
T Consensus 203 ~vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~DL~~aI~~G~~p~w~l~vQl~~~ 267 (491)
T 2j2m_A 203 WVNAHGNTVYIKLRWVPKEGVHNLSADEATEVQG---------------KDFNHASNDTFQAIENGDFPEWDLFVQVLDP 267 (491)
T ss_dssp EECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEEEECG
T ss_pred eEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcC---------------CChhHHHHHHHHHHHcCCCCeEEEEEEeech
Confidence 9999999999999999999999999888776422 2467999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|....+|+++|+||+|||+++|+++||+|+||+|+++ ++|||++|+|+|+++||+||+ |||||+|+++|.
T Consensus 268 ~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~pS~-------D~lLq~R~faY~ 340 (491)
T 2j2m_A 268 ADVENFDFDPLDATKDWFEDVIPFQHVGTMTLNKNVDNYFAETESVGFNPGVLVPGMLPSE-------DKLLQGRLFSYS 340 (491)
T ss_dssp GGGGGSSSCTTCTTCCCCTTTSCCEEEEEEEEEEECSCTCCCCCTCCCCTTCCCTTEEECS-------CHHHHHHHHHHH
T ss_pred hhhhcCCCCCCCCCccCCcccCCcEEEEEEEecCCCcchhhhhhhhhcCcccccCCcccCC-------ChHHHHHHHHHH
Confidence 99999999999999999999999999999999999888 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
+|+++|+|.+ ++|.+|| .|-||+
T Consensus 341 ds~r~Rlg~N--------~~qlPvN--~P~~~~ 363 (491)
T 2j2m_A 341 DTQRHRIGPN--------YQQLPIN--CPFAQV 363 (491)
T ss_dssp HHHHHHTCTT--------GGGSTTT--CCSSCC
T ss_pred HHHHHhhcCc--------cccCCCC--CCCccc
Confidence 9999999988 4665555 555554
No 37
>1si8_A Catalase; N-terminal ARM, anti-parallel beta-barrel, wrapping region, terminal helical region, tetramer, heme group, oxidoreducta; HET: HEM; 2.30A {Enterococcus faecalis} SCOP: e.5.1.1
Probab=100.00 E-value=2.4e-61 Score=594.36 Aligned_cols=298 Identities=21% Similarity=0.340 Sum_probs=269.8
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 46 eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG---- 120 (484)
T 1si8_A 46 ERVPERVVHAKGAGAHGIFKVSQSMAQYTKADFLSEVGKETPLFARFSTVAGELGSSDTLRDPRGFALKFYTD-EG---- 120 (484)
T ss_dssp CCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTCCSSSSSCCEEEEEEEET-TE----
T ss_pred CCCCCccccCCcceeEEEEEECCchhHhhhchhccCCCceeeEEEEecCCCCCCCCCcccCCcCceEEEEecC-CC----
Confidence 68899999999999999999999999999999996 5899999999999999865 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||||||+||||++|+++|++|+++.+++|++.++ .+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 121 n~DlV~nN~PvFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~ 200 (484)
T 1si8_A 121 NYDLVGNNTPIFFIRDAIKFPDFIHSQKRNPRTHLKSPEAVWDFWSHSPESLHQVTILMSDRGIPLSFRHMHGFGSHTFK 200 (484)
T ss_dssp EEEEEEESSSSCSCSCGGGHHHHHHHHSBCTTTCSBCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEE
T ss_pred ceeeeeccCcccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHHHhCchhHHHHHHHhccCCCCCCcccccccccCceE
Confidence 499999999999999999999999999998865433 344 4444566777999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||+|+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||++++
T Consensus 201 ~vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~DL~~aI~~g~~p~w~l~vQl~~~ 265 (484)
T 1si8_A 201 WVNAAGEVFFVKYHFKTNQGIKNLESQLAEEIAG---------------KNPDFHIEDLHNAIENQEFPSWTLSVQIIPY 265 (484)
T ss_dssp EECTTCCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEEEEEH
T ss_pred EEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcC---------------CChhHhHHHHHHHHHCCCCceEEEEEEeecc
Confidence 9999999999999999999999999888776422 2467999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|.+..+|+++|+||+|||+++|+++||+|+||+|+++ +++||++|+|||+++||+||+ |||||+|+++|.
T Consensus 266 ~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~pS~-------D~lLq~R~fsY~ 338 (484)
T 1si8_A 266 ADALTMKETLFDVTKTVSQKEYPLIEVGTMTLNRNPENYFAEVEQVTFSPGNFVPGIEASP-------DKLLQGRLFAYG 338 (484)
T ss_dssp HHHTTCHHHHTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECCS-------CHHHHHHHHHHH
T ss_pred hhhhcCCCCCCcCCccCCcccCCeeEeEEEEECCCccccccccccccccccccCCccccCC-------ChhhhhHHHHHH
Confidence 99888899999999999999999999999999999888 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
+|+++|+|.+ ++|.+|| .|-||+
T Consensus 339 ds~r~Rlg~N--------~~qlPvN--~P~~~~ 361 (484)
T 1si8_A 339 DAHRHRVGAN--------SHQLPIN--QAKAPV 361 (484)
T ss_dssp HHHHHHTCTT--------GGGSGGG--CCSSCC
T ss_pred HHHHHhhcCc--------cccCCCC--CCCCcc
Confidence 9999999998 4665555 555554
No 38
>1m7s_A Catalase; beta barrel, alpha helical domain, oxidoreductase; HET: HEM; 1.80A {Pseudomonas syringae} SCOP: e.5.1.1
Probab=100.00 E-value=3.6e-61 Score=592.84 Aligned_cols=296 Identities=19% Similarity=0.270 Sum_probs=268.4
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCcc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSSL 1787 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~~ 1787 (2280)
+++++|.+||||+|++|+|++++++++++++++|++||+|||++|||+++|+++ |+.+|+|||||||+++ +| +
T Consensus 44 eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG----n 118 (484)
T 1m7s_A 44 ERIPERVVHARGTGVKGEFTASADISDLSKATVFKSGEKTPVFVRFSSVVHGNHSPETLRDPHGFATKFYTA-DG----N 118 (484)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSTTCEEEEEEEEECSSSCTTCCTTSCSCCEEEEEEEET-TE----E
T ss_pred CCCCccccCCCcceEEEEEEECCchHHhhhccccCCCCeeEEEEEeccCCCCCCCCcccCCcCceEEEEecC-CC----c
Confidence 688999999999999999999999999999999977999999999999999855 9999999999999997 44 5
Q ss_pred eeeecccccccccCChhhHHHHHhhccchhhhhh----------ccCc---chhhhhhhcccCCCccccceeeeeeeEEE
Q 037878 1788 LDLTLKTGNAFYARTIGDFATWLVCGLAAREEHV----------KRVP---HIRDAVWKSLRLSDSYAEMHYYSNICRLF 1854 (2280)
Q Consensus 1788 ~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~----------~~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~~ 1854 (2280)
|||||||+||||++|+++|++|+++.+++|++.+ ..+| +....+.+.+++|.||++|+|||+|+|+|
T Consensus 119 ~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~htf~~ 198 (484)
T 1m7s_A 119 WDLVGNNFPTFFIRDAIKFPDMVHAFKPDPRTNLDNDSRRFDFFSHVPEATRTLTLLYSNEGTPAGYRFMDGNGVHAYKL 198 (484)
T ss_dssp EEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTSSCCHHHHHHHHHTCGGGHHHHHHHHSGGGSBSCGGGSCEECCSCEEE
T ss_pred ceeeecCCCccccCCHHHHHHHHHHhCcCCccCCCCHHHHHHHHHhChhHhhHHHHhhccCCCCCccccccccccCceee
Confidence 9999999999999999999999999999886544 3445 44444567789999999999999999999
Q ss_pred EEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCC
Q 037878 1855 RFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIP 1934 (2280)
Q Consensus 1855 ~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~ 1934 (2280)
+|++|+.+||||||+|.+|+++++.+|+.+... +++|||++||+++|++|++++|+|+||+++++
T Consensus 199 vn~~G~~~~VK~h~~P~~Gv~~L~~~ea~~~~g---------------~dpd~l~~DL~~aI~~g~~p~w~l~vQl~~~~ 263 (484)
T 1m7s_A 199 VNAKGEVHYVKFHWKSLQGIKNLDPKEVAQVQS---------------KDYSHLTNDLVGAIKKGDFPKWDLYVQVLKPE 263 (484)
T ss_dssp ECTTSCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCSCHHHHHHHHHHHTTCCCEEEEEEEEECGG
T ss_pred EcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcC---------------CChhhhHHHHHHHHHcCCCceEEEEEEeecHH
Confidence 999999999999999999999999888765421 24679999999999999988999999999999
Q ss_pred CccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHHh
Q 037878 1935 QDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEI 2012 (2280)
Q Consensus 1935 d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~ 2012 (2280)
|...++|+++|+||+||| +|+++||+|+||+|+++ +++||++|+|||+++||+||+ |||||+|.++|.+
T Consensus 264 d~~~~~~~~~D~Tk~Wpe--~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~~S~-------DplLq~R~fsY~d 334 (484)
T 1m7s_A 264 ELAKFDFDPLDATKIWPD--VPEKKIGQMVLNKNVDNFFQETEQVAMAPANLVPGIEPSE-------DRLLQGRVFSYAD 334 (484)
T ss_dssp GGGGSSSCTTCTTCCCSS--SCEEEEEEEEEEEECSCHHHHTTTCCCCTTCCCTTEEECS-------CHHHHHHHHHHHH
T ss_pred HhhcCCCCccCCCCcCCC--CCCEEeEEEEECCCcccchhhhhhhcccccccCCccCCCC-------ChHHHHHHHHHHH
Confidence 999999999999999999 99999999999999887 899999999999999999999 9999999999999
Q ss_pred hhHhhcCCCCchhHHHhhhcccccccCCCCCc
Q 037878 2013 CQHLRNGEPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2013 s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
|+++|+|.+ ++|++|| .|.||+
T Consensus 335 s~r~Rlg~N--------~~qlPvN--~P~~~~ 356 (484)
T 1m7s_A 335 TQMYRLGAN--------GLSLPVN--QPKVAV 356 (484)
T ss_dssp HHHHHTCTT--------GGGSGGG--CCSSCC
T ss_pred HHHHhhcCC--------cccCCCC--CCCCcc
Confidence 999999998 5666665 444544
No 39
>2xq1_A Peroxisomal catalase; oxidoreductase, hydrogen peroxide detoxification, PTS1; HET: HEM; 2.90A {Pichia angusta}
Probab=100.00 E-value=2.8e-61 Score=595.69 Aligned_cols=297 Identities=18% Similarity=0.244 Sum_probs=268.7
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 59 eripeR~vHAKG~ga~G~F~vt~dis~~t~A~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG---- 133 (509)
T 2xq1_A 59 ERIPERVVHAKGAGAYGVFEVTDDITDVCSAKFLDTVGKKTRIFTRFSTVGGEKGSADTARDPRGFATKFYTE-DG---- 133 (509)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTSCTTSSSCCEEEEEEEET-TE----
T ss_pred CCCCCccccCCcceeEEEEEECCchhHhhhchhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecC-CC----
Confidence 57899999999999999999999999999999996 4999999999999999864 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||||||+||||++|+++|++|+++++++|++.++ .+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 134 n~DlVgnN~PVFfirD~~kFpd~iha~k~~p~t~~~d~~~~~df~s~~Pes~h~~~~l~sdrg~P~syr~m~g~g~htf~ 213 (509)
T 2xq1_A 134 NLDLVYNNTPIFFIRDPIKFPHFIHTQKRNPATNLKDPNMFWDYLTANDESLHQVMYLFSNRGTPASYRTMNGYSGHTYK 213 (509)
T ss_dssp EEEEEEESSSCCSCSSGGGHHHHHHHHSBCTTTCSBCHHHHHHHHHHSGGGHHHHHHHHSGGGSBSCSTTCCEECCSCEE
T ss_pred ceeeeecCCCccccCCHHHHHHHHHHhCCCCccCCCCHHHHHHHHHhChhhhhhHHHhhccCCCCCChhhccCcccccee
Confidence 499999999999999999999999999998864443 444 3444456777999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||++++
T Consensus 214 ~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~DL~~~I~~g~~p~w~l~VQl~~~ 278 (509)
T 2xq1_A 214 WYNSKGEWVYVQVHFIANQGVHNLLDEEAGRLAG---------------EDPDHSTRDLWEAIEKGDYPSWECYIQTMTL 278 (509)
T ss_dssp EECTTSCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHHTCCCEEEEEEEEECH
T ss_pred eecCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcC---------------CChhHHHHHHHHHHHcCCCceEEEEEEeecH
Confidence 9999999999999999999999999888766422 2467999999999999998899999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|.+..+|+++|+||+|||+++|+++||+|+||+|+++ +++||++|+|||+++||+||+ |||||+|+++|.
T Consensus 279 ~d~~~~~f~~~D~Tk~WPe~~~P~i~VG~L~Lnrnp~n~fae~EqlaF~P~~~vpGI~pS~-------D~lLq~R~faY~ 351 (509)
T 2xq1_A 279 EQSKKLPFSVFDLTKVWPHKDFPLRHFGRFTLNENPKNYYAETEQIAFSPSHTVPGMEPSN-------DPVLQSRLFSYP 351 (509)
T ss_dssp HHHTTCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEEECS-------CHHHHHHHHHHH
T ss_pred HHHhcCCCCCCcCcccCCcccCCceEeEEEEECCCccchhhhhhhhhcCccccCCCcCCCC-------ChHHHHHHHHHH
Confidence 99988999999999999999999999999999999988 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhcccccccCCCCC
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVKVDLSGCP 2043 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~ 2043 (2280)
+|+++|+|.+ ++|.+|| .|.|+
T Consensus 352 ds~r~Rlg~N--------~~qlPvN--~P~~~ 373 (509)
T 2xq1_A 352 DTHRHRLGPN--------YHQIPVN--CPLKS 373 (509)
T ss_dssp HHHHHHTCTT--------GGGSGGG--SCCSS
T ss_pred HHHHHhhccc--------cccCCcc--CCCCc
Confidence 9999999988 4666555 55555
No 40
>3ite_A SIDN siderophore synthetase; ligase, non-ribosomal peptide synthesis, NRPS, sidna3, fungal, endophyte; HET: MSE; 2.00A {Neotyphodium lolii}
Probab=100.00 E-value=4.4e-60 Score=638.55 Aligned_cols=504 Identities=17% Similarity=0.154 Sum_probs=306.8
Q ss_pred CCCCCCHHHHHHhhccccccCCceEEEEEcC----CCceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCC
Q 037878 465 FPELSSLDGYLKHWGTHRITQKKTLFTWINE----EGVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPG 540 (2280)
Q Consensus 465 ~~~~~tl~~~l~~~a~~~~~~d~~A~~~~~~----~g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s 540 (2280)
+.+..++.+++++++++. |+++|+.+.+. +....+++||+||+++++++|+.|++. |+ +||+|+++++|+
T Consensus 16 ~~~~~tl~~~l~~~a~~~--p~~~A~~~~~~~~~~~~~~~~~~Ty~eL~~~~~~lA~~L~~~---g~-~gd~V~i~~~n~ 89 (562)
T 3ite_A 16 YTSTVPPSHYIETWAKTH--PEWKAVEVATGFLGSQKIVTEDWTYKKLNETANQVANLIIHA---SL-HGRAIAVSLDRS 89 (562)
T ss_dssp --CCCCTTHHHHHHHHHC--TTSEEEEEEECC-----CEEEEEEHHHHHHHHHHHHHHHHHT---TC-SSCEEEEECCSC
T ss_pred ecccCCHHHHHHHHHHHC--CCchhhhcccccccccccccCCCCHHHHHHHHHHHHHHHHhc---CC-CCCEEEEEeCCC
Confidence 455678889999999874 89999987642 112237899999999999999999988 88 799999999999
Q ss_pred HhHHHHHHHHHHcCCeEEeCCCCCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCCCCCCCccccccccccccc
Q 037878 541 LDFVDAFFGCMRAKVLPVPVLPPDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGSWPNLPWLHTDSWVKNSKN 620 (2280)
Q Consensus 541 ~e~~va~LA~l~aGa~~vpld~~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 620 (2280)
+++++++|||+++|+++||+++.++.++ +.++++++++++++++.......... .....+...........
T Consensus 90 ~~~~~~~lA~~~~Gav~vpl~~~~~~~~-------l~~~l~~~~~~~~i~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 160 (562)
T 3ite_A 90 LIAFAIIVGIMKSGNTYVPIEAGLPNDR-------KSFLLRDSRAAMAFVCDNNFDGVELP--PETKVLDTKNQSFIENL 160 (562)
T ss_dssp HHHHHHHHHHHHTTCEEEECCTTSCHHH-------HHHHHHHHTCSEEEECTTTTTTCCCC--TTCEEEETTCHHHHHHH
T ss_pred HHHHHHHHHHHHhCCEEEecCCcCHHHH-------HHHHHHhcCCCEEEEccccccccccC--ccceeecccchhhhhhc
Confidence 9999999999999999999999999988 88999999999999976543322110 11111111000000000
Q ss_pred cccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHH--------cCCCCCcEEEEEcCchhhhhHH
Q 037878 621 LLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKR--------YKSTSKTVLVSWLPQYHDMGLI 692 (2280)
Q Consensus 621 ~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~--------~~~~~~d~~l~~~pl~h~~gl~ 692 (2280)
.............++++|||+|||||||.||||++||+++.+.+...... +.+...+++++++|++|+.++
T Consensus 161 ~~~~~~~~~~~~~~~~~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 239 (562)
T 3ite_A 161 STQDTSDILNNYPENLDAYLLYTSGSTGTPKGVRVSRHNLSSFSDAWGKLIGNVAPKSLELGGVGKFLCLASRAFDVHI- 239 (562)
T ss_dssp HHSCCSCCCCCCCTTSEEEEEEECC---CCEEEEEEHHHHHHHHHHHHHHHHHHCGGGGGCTTTCEEECCSCTTSTHHH-
T ss_pred ccccccccccCCCCCCcEEEEECCCCCCCCcEEEECchhHHHHHHHHHhhhccccchhcccCcCceEEEecCchhhhhH-
Confidence 00011112234457899999999999999999999999999888766543 347788999999999999986
Q ss_pred HHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCC
Q 037878 693 GGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVR 772 (2280)
Q Consensus 693 ~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~ 772 (2280)
..++.++..|+++++.+.. ..+..+.+.++++++|++.++|++++.+. . ...++++||.+++|||+++
T Consensus 240 ~~~~~~l~~g~~~~~~~~~---~~~~~~~~~i~~~~~t~~~~~P~~l~~~~----~-----~~~~~~~lr~~~~gG~~l~ 307 (562)
T 3ite_A 240 GEMFLAWRFGLCAVTGERL---SMLDDLPRTFRELGVTHAGIVPSLLDQTG----L-----VPEDAPHLVYLGVGGEKMT 307 (562)
T ss_dssp HHHHHHHHTTCEEEECCHH---HHHHSHHHHHHHTTCCEEEECHHHHHHHT----C-----CGGGSTTCCEEEEESSCCC
T ss_pred HHHHHHHhcccEEEecchh---hCHHHHHHHHHHcCCCEEEcCHHHHhhcc----c-----CccccCceEEEEEecCCCC
Confidence 4678899999998876532 13567889999999999999999776542 1 1256889999999999999
Q ss_pred HHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCC
Q 037878 773 QTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEP 852 (2280)
Q Consensus 773 ~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~ 852 (2280)
+++.++|.+. .++.++|.||+||+++.++...... ....+++|+|+++++++|+|++++. .+|+
T Consensus 308 ~~~~~~~~~~------~~~~~~~~YG~TE~~~~~~~~~~~~---------~~~~~~~G~p~~~~~~~i~d~~~~~-~~~~ 371 (562)
T 3ite_A 308 PRTQQIWSSS------DRVALVNVYGPTEVTIGCSAGRILP---------DSDTRCIGHPLGDSVAHVLAPGSNE-HVKK 371 (562)
T ss_dssp HHHHHHHTTC------SSCEEEEEECCGGGCSCSEEEECCT---------TSCTTEEEEECTTCEEEEECTTSSC-BCCT
T ss_pred HHHHHHHhhC------CCcEEEEeeccchheeeeeeeeecC---------CCCCccccccCCCCeEEEEeCCCCC-CCCC
Confidence 9999988764 3678999999999987766543211 1123578999999999999987654 4589
Q ss_pred CCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CCeEEEEecCCCeEEECCeeechHHHHHH
Q 037878 853 GKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DGKFFITGRIKDLIIVAGRNVYSADVEKT 931 (2280)
Q Consensus 853 G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG~l~~~GR~dd~IKi~G~rI~~~EIE~~ 931 (2280)
|+.|||+|+||++++||||+|+.|+..|. ++++||||||+|+++ ||+|+|+||+|||||++|+||+|.|||++
T Consensus 372 g~~GEl~v~g~~v~~GY~~~p~~t~~~~~------~g~~w~~TGDlg~~d~dG~l~~~GR~dd~Ik~~G~~v~p~eIE~~ 445 (562)
T 3ite_A 372 GMAGELVIEGSLVANGYLNRPDAKGFCDI------NGRKMYRTGDIVRMDADSSILFLGRKDEQVKVRGQRLELGEVSEV 445 (562)
T ss_dssp TSCEEEEEESTTSCCEESSCTTCCSEEEE------TTEEEEEEEEEEEECTTSCEEEEEEC-------------------
T ss_pred CCceEEEEeccccchhhCCCccccccccC------CCCEEEecCCEEEEcCCCeEEEEccccCEEeECcEEECHHHHHHH
Confidence 99999999999999999999998875543 346799999999997 99999999999999999999999999999
Q ss_pred HHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEec----------C-CCCCCHHHHHHHHHHHHHhcCc
Q 037878 932 VESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVR----------D-GKPVDKDVIENIKTRVVEEHGV 1000 (2280)
Q Consensus 932 L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~----------~-~~~~~~~l~~~l~~~l~~~~~~ 1000 (2280)
|.+++.+.. .++|++.+++..++. .+.+++..... + .....++++++++++|+. |+
T Consensus 446 l~~~~~~~~--~~~v~~~~~~~~~~~---------~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~L~~-y~- 512 (562)
T 3ite_A 446 IRSLSPTDI--DVVTLLLNHPGTSKQ---------FLVSFVASSGAAVRGELRWINENYKEINNSLRQACEQTLPA-YM- 512 (562)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred HHhcCCCce--eEEEEEecCCCCcce---------EEEEEEecccccccccccccccchhhHHHHHHHHHHhhCCc-cc-
Confidence 999854432 367777666543321 11111111000 0 001113455666666554 44
Q ss_pred ceeEEEEecCCCccCC-CCcccchHHHHHHhhcC
Q 037878 1001 TVASVKLIKPRTMSKT-TSGKIKRFECLKQFVDG 1033 (2280)
Q Consensus 1001 ~~~~~~lv~~~~lP~t-~sGKvdR~~L~~~~~~~ 1033 (2280)
.|..++.+++||+| ++|||||++|++++.+.
T Consensus 513 --~P~~i~~v~~lP~t~~~GKi~r~~L~~~~~~~ 544 (562)
T 3ite_A 513 --VPDFIIPISFIPLRDTSAKTDAKALEHMFHTL 544 (562)
T ss_dssp ----------------------------------
T ss_pred --CCcEEEEeccCCCCCCCCcchHHHHHHHHhcc
Confidence 44455667999998 89999999999887653
No 41
>1dgf_A Catalase; heme, NADPH, hydrogen peroxide, oxidoreductase; HET: HEM NDP; 1.50A {Homo sapiens} SCOP: e.5.1.1 PDB: 1dgg_A* 1f4j_A* 1qqw_A* 1dgh_A* 1dgb_A* 3rgp_A* 3re8_A* 3rgs_A* 3nwl_A* 4blc_A* 1th2_A* 1th3_A* 1th4_A* 1tgu_A* 7cat_A* 8cat_A*
Probab=100.00 E-value=4.3e-61 Score=593.93 Aligned_cols=292 Identities=21% Similarity=0.329 Sum_probs=267.1
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 63 eripeR~vHAKG~ga~G~F~vt~di~~~t~a~~F~~~Gk~tpv~vRFStv~G~~gs~Dt~rD~RGfAvKfyt~-eG---- 137 (497)
T 1dgf_A 63 ERIPERVVHAKGAGAFGYFEVTHDITKYSKAKVFEHIGKKTPIAVRFSTVAGESGSADTVRDPRGFAVKFYTE-DG---- 137 (497)
T ss_dssp CCCCCCSSCCSEEEEEEEEEECSCCTTTCCCGGGSSTTCEEEEEEEEECSSSCTTSCSSSSSCCEEEEEEEET-TE----
T ss_pred CCCCCcccCCCcceeEEEEEECCChhHhhhchhccCCCceeeEEEEeecCCCCCCCCCcCCCcCceEEEEecC-CC----
Confidence 68899999999999999999999999999999996 5899999999999999865 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhc----------cCc---chhhhhhhcccCCCccccceeeeeeeEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVK----------RVP---HIRDAVWKSLRLSDSYAEMHYYSNICRL 1853 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~----------~~~---~~~~~~~~~~~~p~s~~~~~y~s~~~~~ 1853 (2280)
+|||||||+||||++|+++|++|+++.+++|++.++ .+| +....+.+.+++|.||++|+|||+|+|+
T Consensus 138 n~DlVgnN~PVFfirD~~kFpd~i~a~k~~p~t~~~d~~~~wdf~s~~PEs~h~~~~l~sdrg~P~s~r~m~g~g~htf~ 217 (497)
T 1dgf_A 138 NWDLVGNNTPIFFIRDPILFPSFIHSQKRNPQTHLKDPDMVWDFWSLRPESLHQVSFLFSDRGIPDGHRHMNGYGSHTFK 217 (497)
T ss_dssp EEEEEEESSSSCSCSSGGGHHHHHHHHSBCTTTCSBCHHHHHHHHHHCGGGHHHHHHHTSGGGSBSSSTTSCEECCSCEE
T ss_pred ceeEeecCCCccccCCHHHHHHHHHhcCCCCcCCCCCHHHHHHHHHhCchhhhHHHHHhccCCCCCCccccccccccceE
Confidence 499999999999999999999999999998865443 344 4444556777999999999999999999
Q ss_pred EEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeC
Q 037878 1854 FRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPI 1933 (2280)
Q Consensus 1854 ~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~ 1933 (2280)
|+|++|+.+||||||+|.+|+++++.+|+.+... +++||+++||+++|++|++++|+|+||++++
T Consensus 218 ~vn~~G~~~~VKfh~~P~~Gv~~L~~~ea~~~~g---------------~d~d~~~~DL~~aI~~G~~p~w~l~vQl~~~ 282 (497)
T 1dgf_A 218 LVNANGEAVYCKFHYKTDQGIKNLSVEDAARLSQ---------------EDPDYGIRDLFNAIATGKYPSWTFYIQVMTF 282 (497)
T ss_dssp EECTTSCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEEEECH
T ss_pred EEcCCCCEEEEEEEEEeCCCCCCCCHHHHHHhcC---------------CCccHHHHHHHHHHHcCCCceEEEEEEeech
Confidence 9999999999999999999999999888776422 2467999999999999999999999999999
Q ss_pred CCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchhhHHH
Q 037878 1934 PQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYE 2011 (2280)
Q Consensus 1934 ~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~ 2011 (2280)
+|....+|+++|+||+|||+++|+++||+|+||+|+++ ++|||++|+|+|+++||+||+ |||||+|+++|.
T Consensus 283 ~d~~~~~~~~~D~Tk~Wpe~~~P~i~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~pS~-------D~lLq~R~fsY~ 355 (497)
T 1dgf_A 283 NQAETFPFNPFDLTKVWPHKDYPLIPVGKLVLNRNPVNYFAEVEQIAFDPSNMPPGIEASP-------DKMLQGRLFAYP 355 (497)
T ss_dssp HHHHHCSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSSHHHHTTTCCCCTTCCCTTEEECS-------CHHHHHHHHHHH
T ss_pred hhhhcCCCCCCcCceECCcccCCcEEEEEEEecCCCcccccccccccccccccCCccccCC-------ChhhhhHHhHHH
Confidence 99888999999999999999999999999999999988 899999999999999999999 999999999999
Q ss_pred hhhHhhcCCCCchhHHHhhhccccc
Q 037878 2012 ICQHLRNGEPLPESWRIFLEQSDVK 2036 (2280)
Q Consensus 2012 ~s~~~R~~~~~~~~~~~~~~~~~~~ 2036 (2280)
+|+++|+|.+ ++|.+||
T Consensus 356 ds~r~Rlg~N--------~~qlPvN 372 (497)
T 1dgf_A 356 DTHRHRLGPN--------YLHIPVN 372 (497)
T ss_dssp HHHHHHTCTT--------GGGSGGG
T ss_pred HHHHHhhcCc--------hhccccc
Confidence 9999999998 5676666
No 42
>3e4w_A Putative uncharacterized protein; heme enzyme, catalase, peroxidase, oxidoreductase; HET: HEM; 1.80A {Mycobacterium avium subsp} PDB: 3e4y_A*
Probab=100.00 E-value=1e-60 Score=566.54 Aligned_cols=283 Identities=21% Similarity=0.304 Sum_probs=251.8
Q ss_pred HHHhhhhhhhhhhheecccccccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCC--cccccccccEE
Q 037878 1697 IVGNLSANLAATTLKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADD--DARIDARGAAI 1774 (2280)
Q Consensus 1697 ~v~~l~~~~~~~~~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Ai 1774 (2280)
++..++.-. .+++++|.+||||.|++|+|++++|+++++++++|+ |++|||++|||+++|+++ |+.+|+|||||
T Consensus 17 lid~l~~~~---~e~~~~R~vHAKG~~a~G~F~v~~d~~~~t~a~~f~-g~~tpv~vRFSt~~g~~g~~D~~rd~RGfAv 92 (320)
T 3e4w_A 17 AIDAIRGTG---GAQPGCRALHAKGTLYRGTFTATRDAVMLSAAPHLD-GSTVPALIRFSNGSGNPKQRDGAPGVRGMAV 92 (320)
T ss_dssp HHHHHHHTT---CCCTTSCSSSCSEEEEEEEEEECTTGGGTCCCGGGS-SCEEEEEEEEEESSSCTTCCTTSSCCEEEEE
T ss_pred HHHHHHHhc---CCCCCCccCCCCeeeEEEEEEECCCchHHHhccccC-CceeEEEEEeccCCCCCCCCccCCCCCceEE
Confidence 444444433 367899999999999999999999999999999995 999999999999999864 99999999999
Q ss_pred EeeccCCCCCCcceeeecccccccccCChhhHHHHHhhccchh------hhhhccCc---chhhhhhhcccCCCccccce
Q 037878 1775 RIFSDLNGNTSSLLDLTLKTGNAFYARTIGDFATWLVCGLAAR------EEHVKRVP---HIRDAVWKSLRLSDSYAEMH 1845 (2280)
Q Consensus 1775 k~~~~~~~~~~~~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~------~~~~~~~~---~~~~~~~~~~~~p~s~~~~~ 1845 (2280)
||+++ +| .+|||||||+||||++|+++|++|+++++++. ..++..+| +....+.+.+++|.||++|+
T Consensus 93 Kf~t~-eG---~~~Dlv~nN~PvFfird~~~F~~~i~a~k~~~~d~~~~~df~~~~Pes~h~~~~l~s~rg~p~s~~~~~ 168 (320)
T 3e4w_A 93 KFTLP-DG---STTDVSAQTARLLVSSTPEGFIDLLKAMRPGLTTPLRLATHLLTHPRLLGALPLLREANRIPASYATTE 168 (320)
T ss_dssp EEECT-TS---CEEEEEEESCSSCSCSSHHHHHHHHHHTSSSTTHHHHHHHHHHHCHHHHTTHHHHHHHTCEESCGGGSC
T ss_pred EEEcC-CC---CeEeeeeccccceecCCHHHHhHHHHhhCCCCCCHHHHHHHHHhCHhHHHHHHHHhccCCCCCCcccCC
Confidence 99987 33 26999999999999999999999999998652 34455566 44444557789999999999
Q ss_pred eeeeeeEEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEE
Q 037878 1846 YYSNICRLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYI 1925 (2280)
Q Consensus 1846 y~s~~~~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~ 1925 (2280)
|||+|+|+|+|++|+.+||||+++|.+|+++++.+|+.. +++|||++||+++|++|+ ++|+
T Consensus 169 ~~s~htf~~~n~~G~~~~vK~~~~p~~g~~~l~~~ea~~------------------~~pd~l~~dL~~~i~~g~-~~w~ 229 (320)
T 3e4w_A 169 YHGLHAFRWIAADGSARFVRYHLVPTAAEEYLSASDARG------------------KDPDFLTDELAARLQDGP-VRFD 229 (320)
T ss_dssp EEEEEEEEEECTTSCEEEEEEEEEESSCCCEECHHHHHT------------------SCTTHHHHHHHHHHHHSC-EEEE
T ss_pred ccccccEEEEcCCCCEEEEEEEEEeCCCCCCCCHHHhcc------------------CCccHHHHHHHHHHHhCC-ccEE
Confidence 999999999999999999999999999998888776542 257899999999999987 5999
Q ss_pred EEEEEeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccc
Q 037878 1926 FQLQIRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASID 2003 (2280)
Q Consensus 1926 l~vQ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~ 2003 (2280)
|+||+++++| +++|+||+|||+ |+++||+|+||+|++| ++|||++|||||+++||+||+ ||||
T Consensus 230 l~vQ~~~~~d------~~~D~Tk~Wpe~--P~~~VG~l~Ln~n~~n~f~e~Eq~aF~P~~~vpGi~ps~-------D~ll 294 (320)
T 3e4w_A 230 FRVQIAGPTD------STVDPSSAWQST--QIVTVGTVTITGPDTEREHGGDIVVFDPMRVTDGIEPSD-------DPVL 294 (320)
T ss_dssp EEEEECCTTC------CSSCTTSCCCCC--CEEEEEEEEEEEECCSSSSTTCCCCCCTTCCCTTEEECS-------CHHH
T ss_pred EEEEecCCCC------cCCCCCCccCCC--CCEEeEEEEECCCCccchhcccceeeeccccCCccCCCC-------ChHH
Confidence 9999998766 578999999998 9999999999999988 899999999999999999999 9999
Q ss_pred cchhhHHHhhhHhhcCCC
Q 037878 2004 HGRSLIYEICQHLRNGEP 2021 (2280)
Q Consensus 2004 ~~R~~~Y~~s~~~R~~~~ 2021 (2280)
|+|+++|.+|+++|+|++
T Consensus 295 q~R~~aY~ds~r~Rlg~n 312 (320)
T 3e4w_A 295 RFRTLVYSASVKLRTGVD 312 (320)
T ss_dssp HHHHHHHHHHHHHHHSCC
T ss_pred HhHhHHHHHHHHhhcCCC
Confidence 999999999999999987
No 43
>2iuf_A Catalase; oxidoreductase; HET: HDD NAG; 1.71A {Penicillium janthinellum} PDB: 2xf2_A*
Probab=100.00 E-value=1.2e-60 Score=610.93 Aligned_cols=298 Identities=19% Similarity=0.240 Sum_probs=268.8
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++|+++++++++|+ +||+|||++|||+++|+++ |+.+|+||||||||++ +|
T Consensus 55 eripeR~vHAKG~ga~G~F~vt~d~~~~t~A~~F~~~Gk~tPv~vRFStv~G~~gs~Dt~rd~RGfAvKfyt~-eG---- 129 (688)
T 2iuf_A 55 ERVPERAVHARGTGAHGTFTSYGDWSNLTAASFLSAEGKETPMFTRFSTVAGSRGSADTARDVHGFATRFYTD-EG---- 129 (688)
T ss_dssp CCCCCCSSCCSEEEEEEEEEESSCCTTTCCCGGGSSTTCEEEEEEEEECSSCCTTCCTTSSCCCEEEEEEEET-TE----
T ss_pred CCCccccccCCcceeEEEEEECCCchHhhhhhhhcCCCceEEEEEEccCCCCCCCCCcccCCcCceEEEEecC-CC----
Confidence 68999999999999999999999999999999996 5899999999999999864 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhcc--------------Cc---chhhhhhhcccCCCccccceeeee
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKR--------------VP---HIRDAVWKSLRLSDSYAEMHYYSN 1849 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~--------------~~---~~~~~~~~~~~~p~s~~~~~y~s~ 1849 (2280)
+|||||||+||||++|+++|++|+++.+++|.+.+++ +| +....+.+.+++|.||++|+|||+
T Consensus 130 n~DlVgnN~PVFfirD~~kFpd~i~a~k~~P~t~~~~~~~a~~~~~df~s~~Pes~h~~~~l~sdrg~P~s~r~m~g~g~ 209 (688)
T 2iuf_A 130 NFDIVGNNIPVFFIQDAILFPDLIHAVKPRGDNQIPQAATAHDSAWDFFSQQPSVLHTLLWAXAGHGIPRSFRHVNGFGV 209 (688)
T ss_dssp EEEEEEESSSSCSCSCGGGHHHHHHHHSCCTTTCCSTTCCCSHHHHHHHHHSGGGHHHHHHHHTGGGSBSCGGGCCEEEE
T ss_pred CcceeeecCCccccCCHHHHHHHHHHhCCCCCCCCCchhhhHHHHHHHHHhCcchHHHHHHHccCCCCCCCcccCCcccc
Confidence 4999999999999999999999999999988655544 33 333334566789999999999999
Q ss_pred eeEEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEE
Q 037878 1850 ICRLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQ 1929 (2280)
Q Consensus 1850 ~~~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ 1929 (2280)
|+|+|+|++|+.+||||||+|.+|+++++.+|+.+... +++|||++||+++|++|++++|+|+||
T Consensus 210 htf~~vn~~G~~~~VKfh~~P~~G~~~L~~~ea~~~~g---------------~dpd~l~~dL~~~I~~g~~p~w~l~vQ 274 (688)
T 2iuf_A 210 HTFRLVTDDGKTKLVKFHWKGLQGKASFVWEEAQQTAG---------------KNADFXRQDLFQSIQAGRFPEWELGVQ 274 (688)
T ss_dssp EEEEEECTTCCEEEEEEEEEESSCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred cceEEEccCCCEEEEEEEEEeCCCcCCCCHHHHHHhcC---------------CCcchhhHHHHHHHhcCCCceEEEEEE
Confidence 99999999999999999999999999999888775421 246799999999999999899999999
Q ss_pred EeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchh
Q 037878 1930 IRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRS 2007 (2280)
Q Consensus 1930 ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~ 2007 (2280)
+++++|.+.++|+++|+||+|||+++|+++||+|+||+|+++ +++||++|+|||+++||+||+ |||||+|.
T Consensus 275 l~~~~d~~~~~~~~~D~Tk~WPe~~~P~~~VG~l~Lnrnp~n~fae~Eq~aF~P~~~vpGI~~S~-------DplLq~R~ 347 (688)
T 2iuf_A 275 IMQEQDQLKFGFDLLDPTKIVPEELVPVTILGKMQLNRNPXNYFAETEQVMFQPGHIVRGVDFTE-------DPLLQGRL 347 (688)
T ss_dssp EECGGGTTTTSSCTTCTTCCCCTTTSCEEEEEEEEEEECCSSHHHHTTTCCCCTTCCCTTEECCC-------CHHHHHHH
T ss_pred EechHHhhcCCCCCCcCCccCCcccCCceEEEEEEEcCCccchhhhhhhhcccccccCCCcCCCC-------ChHHHhHH
Confidence 999999999999999999999999999999999999999998 899999999999999999999 99999999
Q ss_pred hHHHhhhHhhcC-CCCchhHHHhhhcccccccCCCCCc
Q 037878 2008 LIYEICQHLRNG-EPLPESWRIFLEQSDVKVDLSGCPM 2044 (2280)
Q Consensus 2008 ~~Y~~s~~~R~~-~~~~~~~~~~~~~~~~~~~~~~~~~ 2044 (2280)
++|.+|+++|+| .+ ++|++|| .|.||+
T Consensus 348 fsY~ds~r~Rlgg~N--------~~qlPvN--~P~~~~ 375 (688)
T 2iuf_A 348 FSYLDTQLNRHGGPN--------FEQLPIN--RPRAPI 375 (688)
T ss_dssp HHHHHHHHHHHSSSC--------GGGSTTT--CCSSCC
T ss_pred hHHHHHHHHhccCCc--------ccccccC--CCCCcc
Confidence 999999999996 77 5665554 555554
No 44
>1sy7_A Catalase 1; heme oxidation, singlet oxygen, oxidoreductase; HET: HDD HEM; 1.75A {Neurospora crassa} SCOP: c.23.16.3
Probab=100.00 E-value=1.2e-57 Score=594.72 Aligned_cols=285 Identities=20% Similarity=0.261 Sum_probs=261.9
Q ss_pred heecccccccccccceeEEEEecCCCCCCcCcccC-CCceeeEEEEecCCCCCCC--cccccccccEEEeeccCCCCCCc
Q 037878 1710 LKVKSRYFHRIGVSGRGQLTIYDNIQGLPDHKIFH-PGKCYPVIVRHSNSLSADD--DARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1710 ~~~~~R~~Hakg~~~~G~f~v~~~~~~~~~~~~f~-~g~~~p~~~RfS~~~~~~~--D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
+++++|.+||||+|++|+|++++++++++++++|+ +||+|||++|||+++|+++ |+.+|+|||||||+++ +|
T Consensus 63 eripeR~vHAKG~ga~G~F~v~~d~~~~t~a~~f~~~Gk~tpv~vRFStv~g~~gs~D~~rd~RGfAvKf~t~-eG---- 137 (715)
T 1sy7_A 63 ERIPERVVHARGSGAFGKFKVYESASDLTMAPVLTDTSRETPVFVRFSTVLGSRGSADTVRDVRGFAVKFYTE-EG---- 137 (715)
T ss_dssp CCCCCCSSSCSEEEEEEEEEESSCCTTTCCCGGGTCSSCCEEEEEEEECSSSCTTSCTTSSSCCEEEEEEEET-TE----
T ss_pred CCCCccccCCCceeEEEEEEECCCchHhhhchhhcCCCceEEEEEEeccCCCCCCCCcccCCcCceeEEEecC-CC----
Confidence 67899999999999999999999999999999996 5899999999999999864 9999999999999997 44
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchhhhhhccC--------------c---chhhhhhhcccCCCccccceeeee
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAREEHVKRV--------------P---HIRDAVWKSLRLSDSYAEMHYYSN 1849 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~~~~~~~~--------------~---~~~~~~~~~~~~p~s~~~~~y~s~ 1849 (2280)
+|||||||+||||++|+++|++|+++.+++|++.+++. | |....+.+.+++|.||++|+|||+
T Consensus 138 n~Dlv~nN~PvFfird~~~F~~~i~a~k~~p~t~~~~~~~~~~~~~df~~~~Pes~h~~~~~~sdr~~p~s~r~m~~~g~ 217 (715)
T 1sy7_A 138 NWDLVGNNIPVFFIQDAIKFPDVIHAGKPEPHNEVPQAQSAHNNFWDFQFNHTEATHMFTWAMSDRAIPRSLRMMQGFGV 217 (715)
T ss_dssp EEEEEEESSSSCSCSSGGGHHHHHHHHSCBTTTTBCTTCCCSHHHHHHHHHCGGGHHHHHHHTSGGGSBSCGGGSCEECC
T ss_pred CcceeeeCCCccccCCHHHHHHHHHHcCCCCccCCCCcccchhHHHHHHhhCchhHHHHHHhccCCCCCccccccccccc
Confidence 49999999999999999999999999999987666543 2 223334455689999999999999
Q ss_pred eeEEEEEeCCcEEEEEEEeecCCCCCCCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEE
Q 037878 1850 ICRLFRFTDGQEMYVKFKLRPYDESIGEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQ 1929 (2280)
Q Consensus 1850 ~~~~~~~~~g~~~~vk~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ 1929 (2280)
|+|+|+|++|+.+||||||+|.+|+++++.+|+.+... +++|||++||+++|++|++++|+|+||
T Consensus 218 htf~~vn~~G~~~~vk~~~~p~~g~~~l~~~ea~~~~g---------------~~~d~l~~dL~~~i~~g~~p~w~l~vQ 282 (715)
T 1sy7_A 218 NTYTLINAQGKRHFVKFHWTPELGVHSLVWDEALKLAG---------------QDPDFHRKDLWEAIENGAYPKWKFGIQ 282 (715)
T ss_dssp SCEEEECTTSCEEEEEEEEEETTCCCBCCHHHHHHHHH---------------HCTTHHHHHHHHHHHTTCCCEEEEEEE
T ss_pred CCceeEcCCCcEEEEEeeEEcCCCCcCCCHHHHHHhhC---------------CCccHHHHHHHHHHhcCCCceEEEEEE
Confidence 99999999999999999999999999999887765532 246799999999999999999999999
Q ss_pred EeeCCCccccccccccCCCCCCCCCCCceeeEEEEecCCCCh--hhhccccccCCcCCCccccccCCCcccccccccchh
Q 037878 1930 IRPIPQDEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLST--EESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRS 2007 (2280)
Q Consensus 1930 ~~~~~d~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~--~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~ 2007 (2280)
+++++|.++++|+++|+||+|||+++|+++||+|+||+|++| +++||++|+|+|+++||++|+ |||+|+|.
T Consensus 283 ~~~~~d~~~~~~~~~D~Tk~Wp~~~~P~~~vG~l~Ln~n~~n~f~e~eq~aF~P~~~vpGI~~S~-------DplLq~R~ 355 (715)
T 1sy7_A 283 AIAEEDEHKFDFDILDATKIWPEDLVPVRYIGEMELNRNPDEFFPQTEQIAFCTSHVVNGIGFSD-------DPLLQGRN 355 (715)
T ss_dssp EEEGGGTTCSSSCTTCTTCCCCTTTSCCEEEEEEEEEECCSCHHHHTTTCCCCTTCCCTTEECCC-------CTTHHHHH
T ss_pred eeChHHhccCCCCCCcCCccCCccCCCceEeEEEEEcCCcccchhhhhhhhcCccccCCCcCCCC-------ChHHHHHh
Confidence 999999999999999999999999999999999999999987 899999999999999999999 99999999
Q ss_pred hHHHhhhHhhcCCC
Q 037878 2008 LIYEICQHLRNGEP 2021 (2280)
Q Consensus 2008 ~~Y~~s~~~R~~~~ 2021 (2280)
++|.+|+++|+|.+
T Consensus 356 fsY~ds~~~Rlg~n 369 (715)
T 1sy7_A 356 FSYFDTQISRLGVN 369 (715)
T ss_dssp HHHHHTHHHHTCTT
T ss_pred HHHHHHHhhhcCCC
Confidence 99999999999954
No 45
>1u5u_A Allene oxide synthase-lipoxygenase protein; catalase, heme, eicosanoid, fusion PR lyase; HET: HEM; 2.00A {Plexaura homomalla} SCOP: e.5.1.2
Probab=100.00 E-value=5.6e-56 Score=536.05 Aligned_cols=292 Identities=28% Similarity=0.438 Sum_probs=245.9
Q ss_pred eecc-cc-cccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCCcccccccccEEEeeccCCCCCCcce
Q 037878 1711 KVKS-RY-FHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADDDARIDARGAAIRIFSDLNGNTSSLL 1788 (2280)
Q Consensus 1711 ~~~~-R~-~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~D~~~~~rG~Aik~~~~~~~~~~~~~ 1788 (2280)
++++ |+ +||||+|++|+|+++++ ++++++++|++|++|||++||||+ +.+||..+|+|||||||++++ ++++|
T Consensus 58 ~~p~~R~~vHAKG~ga~G~F~v~~d-~~~t~a~~F~~gk~tpv~vRFSt~-gs~D~~~rd~RGfAvKf~t~d---~~g~~ 132 (374)
T 1u5u_A 58 TLKGFRRATHTVGTGGIGEITIVND-PKFPEHEFFTAGRTFPARLRHANL-KYPDDAGADARSFSIKFADSD---SDGPL 132 (374)
T ss_dssp HHTTTSCSSSCSEEEEEEEEEECSS-CCSCCCSSSCTTCEEEEEEEEEBS-SCSCTTSEECBEEEEESSSSS---SCCSC
T ss_pred CCCCccccCCCCeeeEEEEEEECCC-chhhcccccCCCCeeeEEEEecCC-CCCCCCCCCCCeEEEEEEecC---CCCce
Confidence 4667 88 99999999999999999 999999999889999999999999 656666699999999999762 25679
Q ss_pred eeeccc---ccccccCChhhHHHHHhhccc--hhhhhhccCcchhhh-hhhcccCCCccccceeeeeeeEEEEEeCCcEE
Q 037878 1789 DLTLKT---GNAFYARTIGDFATWLVCGLA--AREEHVKRVPHIRDA-VWKSLRLSDSYAEMHYYSNICRLFRFTDGQEM 1862 (2280)
Q Consensus 1789 D~~~~n---~p~f~~~~~~~f~~~~~~~~~--~~~~~~~~~~~~~~~-~~~~~~~p~s~~~~~y~s~~~~~~~~~~g~~~ 1862 (2280)
|||||| +||||++|+++|. +.++ .-..++..+|....+ +.+.+++|+||++|+|||+|||+|+|++|+.+
T Consensus 133 Dlv~nNg~~~PvFfird~~~Fi----a~k~p~~~~df~~~~Pes~~~~l~s~r~~P~s~~~~~y~s~htf~~vn~~G~~~ 208 (374)
T 1u5u_A 133 DIVMNTGEANIFWNSPSLEDFV----PVEEGDAAEEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVR 208 (374)
T ss_dssp EEEEEESSSCSCCSHHHHHHHT----TCCTTHHHHHHHTTCHHHHHHHHHHCEESCSCGGGCCEECCSCEEEECTTCCEE
T ss_pred EEEeecCCcccceecCCHHHHH----hcCChHHHHHHHhhCHHHHHHHHhCcCCCCCCcccCCccccceEEEECCCCCEE
Confidence 999999 9999999999994 4443 224567777755444 34445889999999999999999999999999
Q ss_pred EEEEEeecC-----CCCC--CCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCCC
Q 037878 1863 YVKFKLRPY-----DESI--GEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIPQ 1935 (2280)
Q Consensus 1863 ~vk~~~~P~-----~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~d 1935 (2280)
|||||++|. +|.. +++.+++.+. -.+++.+.+.+++|||++||+++|++|+ ++|+|+||++++++
T Consensus 209 ~vK~~~~P~~~~~~~g~~~~~l~~ee~~~~-------~~~~r~~~~~~~~d~l~~dL~~~I~~g~-~~w~l~vQl~~~~~ 280 (374)
T 1u5u_A 209 YCRYRALPGDVDIKEEDESGRLTEEEQRKI-------WIFSRHENEKRPDDYLRKEYVERLQKGP-VNYRLQIQIHEASP 280 (374)
T ss_dssp EEEEEEEESSSCCCGGGCTTCCCHHHHTTT-------TCCSCCTTCCSCTTHHHHHHHHHHHHSC-EEEEEEEEEEECCT
T ss_pred EEEEEEEeCCcccccCcccCCCCHHHHhhc-------cccccccccCCCccHHHHHHHHHHHcCC-ceEEEEEEEecCCc
Confidence 999999997 5554 5554443321 1133333456789999999999999988 99999999999655
Q ss_pred ccccccccccCCCCCCCCCCCceeeEEEEecCCCChhhhccccccCCcCCCccccccCCCcccccccccchhhHHHhhhH
Q 037878 1936 DEAMQDIALDCTKPWDEAEYPYIDVGEISIDQNLSTEESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEICQH 2015 (2280)
Q Consensus 1936 ~~~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~s~~ 2015 (2280)
.+++ +++|+||+|||+++|+++||+|+||+|+++.+|||++|||||+++||+|+.+.|+.||.||||+|+++|.+|++
T Consensus 281 ~d~~--~~~D~Tk~Wpe~~~P~i~VG~l~Ln~~~p~~e~EqlaF~P~~~vpGi~~s~pSs~~D~~~llq~R~~aY~ds~~ 358 (374)
T 1u5u_A 281 DDTA--TIFHAGILWDKETHPWFDLAKVSIKTPLSPDVLEKTAFNIANQPASLGLLEAKSPEDYNSIGELRVAVYTWVQH 358 (374)
T ss_dssp TCCG--GGGCTTSCCCTTTSCCEEEEEEEEEEECCHHHHHHCCCCTTCCCTTSCCCCCSSSSSTTHHHHHHHHHHHHHHH
T ss_pred cccc--CcccCceeCCcccCCcEEEEEEEECCCCCchhhhHhhcCccccCCCccccccccCCCcchHHHHHHHHHHHHHH
Confidence 5564 68999999999999999999999999966669999999999999999888666666777999999999999999
Q ss_pred hhcCCC
Q 037878 2016 LRNGEP 2021 (2280)
Q Consensus 2016 ~R~~~~ 2021 (2280)
+|+|++
T Consensus 359 ~R~g~n 364 (374)
T 1u5u_A 359 LRKLKI 364 (374)
T ss_dssp HHHHTT
T ss_pred hhcccc
Confidence 999875
No 46
>3t5a_A Long-chain-fatty-acid--AMP ligase FADD28; acetyl-COA synthetase like fold, AMP-binding; 2.05A {Mycobacterium tuberculosis} PDB: 3e53_A
Probab=100.00 E-value=2.4e-52 Score=553.08 Aligned_cols=422 Identities=29% Similarity=0.443 Sum_probs=326.6
Q ss_pred CCCHHHHHHhhccccccCCceEEEEEcCC---CceeeeccHHHHHHHHHHHHHHHHhcCCCCCCCCCEEEEEeCCCHhHH
Q 037878 468 LSSLDGYLKHWGTHRITQKKTLFTWINEE---GVAVNQSTYEELDANASRIAHKLLTSRKPVIKPGDRVLLVYVPGLDFV 544 (2280)
Q Consensus 468 ~~tl~~~l~~~a~~~~~~d~~A~~~~~~~---g~~~~~lTY~eL~~~a~~lA~~L~~~~~~Gv~~Gd~V~i~~~~s~e~~ 544 (2280)
..++.+++++++++. |+++|+.+.+.+ ....+++||+||+++++++|+.|+++ |+ +||+|+++++|+++++
T Consensus 23 ~~tl~~~l~~~a~~~--pd~~Al~~~~~~~~~~g~~~~~Ty~el~~~~~~lA~~L~~~---g~-~gd~V~i~~~n~~e~~ 96 (480)
T 3t5a_A 23 VRSLPAALRACARLQ--PHDPAFTFMDYEQDWDGVAITLTWSQLYRRTLNVAQELSRC---GS-TGDRVVISAPQGLEYV 96 (480)
T ss_dssp -CCHHHHHHHHHHHS--TTSEEEEEEETTTCTTCEEEEEEHHHHHHHHHHHHHHHTTS---SC-TTCEEEEECCSSHHHH
T ss_pred cccHHHHHHHHHHhC--CCCceEEEecccCCCCCceEEEcHHHHHHHHHHHHHHHHhc---CC-CCCEEEEEcCCcHHHH
Confidence 468999999998874 899999987621 12237899999999999999999988 86 9999999999999999
Q ss_pred HHHHHHHHcCCeEEeCCC---CCccccchhhHHHHHHHHhhcCCeEEEEccccchhhccCC--CCCC---Cccccccccc
Q 037878 545 DAFFGCMRAKVLPVPVLP---PDPLQRGGQALLKIENISKSCGAVAILSTIGYHSAVRVGS--WPNL---PWLHTDSWVK 616 (2280)
Q Consensus 545 va~LA~l~aGa~~vpld~---~~p~~r~~~~l~~l~~il~~~~~~~vl~~~~~~~~~~~~~--~~~~---~~~~~~~~~~ 616 (2280)
+++|||+++|+++||+++ ..+.++ +.++++++++++++++......+.... .+.. ..+..+...
T Consensus 97 ~~~lA~~~~G~v~vpl~~~~~~~~~~~-------l~~il~~~~~~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 168 (480)
T 3t5a_A 97 VAFLGALQAGRIAVPLSVPQGGVTDER-------SDSVLSDSSPVAILTTSSAVDDVVQHVARRPGESPPSIIEVDLLD- 168 (480)
T ss_dssp HHHHHHHHTTCEEEEECSCCSCTTCCH-------HHHHHHHHCCSEEEECTTTHHHHHHTCC------CCEEEEGGGSC-
T ss_pred HHHHHHHHhCcEEEeeCCCCccchHHH-------HHHHHHhCCCCEEEeChhHHHHHHHHHhccccccccceeEecccc-
Confidence 999999999999999999 667777 889999999999999876654332211 0000 111111110
Q ss_pred cccccccccccccCCCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCC------CcEEEEEcCchhhhh
Q 037878 617 NSKNLLAENVVCFTESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTS------KTVLVSWLPQYHDMG 690 (2280)
Q Consensus 617 ~~~~~~~~~~~~~~~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~------~d~~l~~~pl~h~~g 690 (2280)
.............++|+|||+|||||||.||||++||+|+++.+......+.... ++++++++|++|+++
T Consensus 169 ----~~~~~~~~~~~~~~~d~a~i~~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~~~~~~~d~~l~~~pl~h~~g 244 (480)
T 3t5a_A 169 ----LDAPNGYTFKEDEYPSTAYLQYTSGSTRTPAGVVMSHQNVRVNFEQLMSGYFADTDGIPPPNSALVSWLPFYHDMG 244 (480)
T ss_dssp ----TTCC---CCCCSSCCSEEEEECC------CCCEEEEHHHHHHHHHHHHHHHCTTTTTCCCTTEEEEECCCTTSTTH
T ss_pred ----cccccCCCCCCCCCCceEEEEecCCCCCCCcEEEEeHHHHHHHHHHHHHHhccccccCCCCCCeEEEeCCCcCccH
Confidence 0011112334567899999999999999999999999999999998888888877 999999999999999
Q ss_pred HHHHHHHHHHccceEEEeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCC
Q 037878 691 LIGGLFTAMVGGSTAILFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEP 770 (2280)
Q Consensus 691 l~~~i~~~L~~G~~~vl~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~ 770 (2280)
++..++.+++.|+++++.++..+..+|..+++.++++++| +..+|+++..++...... ......++++||.+++|||+
T Consensus 245 ~~~~~~~~l~~G~~~v~~~~~~~~~~~~~~~~~i~~~~~t-~~~~p~~~~~l~~~~~~~-~~~~~~~l~~lr~i~~gG~~ 322 (480)
T 3t5a_A 245 LVIGICAPILGGYPAVLTSPVSFLQRPARWMHLMASDFHA-FSAAPNFAFELAARRTTD-DDMAGRDLGNILTILSGSER 322 (480)
T ss_dssp HHHHTHHHHHHTCCEEECCHHHHHHCTHHHHHHTTSSSEE-EEEECHHHHHHHHHHCCT-GGGTTCCCTTCCEEEECCTT
T ss_pred HHHHHHHHHHcCCceEEECHHHHHHCHHHHHHHHHhhcee-EeeChHHHHHHHHhhcCc-ccccccchhhhheeeecCCc
Confidence 9888999999999999987655556899999999999999 566666666665443211 11234678999999999999
Q ss_pred CCHHHHHHHHHHhcCCCCCCcccccccCccccccceecccCCCCceeec---------------CCCceeeccccCCCCC
Q 037878 771 VRQTTVKRFVELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILD---------------WQGRVCCGYVDQNDPD 835 (2280)
Q Consensus 771 l~~~l~~~~~~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~---------------~~g~~~~g~vG~p~pg 835 (2280)
++++++++|.+.+...|++++.++|.||+||++++++.......+.... ..+....+++|+|++
T Consensus 323 l~~~~~~~~~~~~~~~~~~~~~~~~~YG~TE~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~G~p~~- 401 (480)
T 3t5a_A 323 VQAATIKRFADRFARFNLQERVIRPSYWLAEATVYVATSKPGQPPETVDFDTESLSAGHAKPCAGGGATSLISYMLPRS- 401 (480)
T ss_dssp CCHHHHHHHHHHSGGGTCCGGGEEEEEEETTTTEEEEECCTTSSCCEEEECHHHHHTTBCCCCCSSSCEEEECEECCSS-
T ss_pred CCHHHHHHHHHHHhhcCCChhhccccccccccceeEeecccCCCcceEEecHHHhccCceeecCCCCcceeeecCcccC-
Confidence 9999999999998766777889999999999998877654322111000 011245678999999
Q ss_pred ceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhcc----CCCCCceeecCcEEEEECCeEEEEec
Q 037878 836 VDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQ----NNRGRKYTRTGDLGRIIDGKFFITGR 911 (2280)
Q Consensus 836 ~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~----~~~~~~~yrTGDlgr~~dG~l~~~GR 911 (2280)
++++|+|++++. .+|.|++|||+|+||++++||||+|++|+++|..++. +.+++|||||||+|+++||+|+|+||
T Consensus 402 ~~~~ivd~~~g~-~~~~g~~GEl~v~g~~v~~GY~~~pe~t~~~f~~~~~~~~~~~~~~~w~~TGDlg~~ddG~l~~~GR 480 (480)
T 3t5a_A 402 PIVRIVDSDTCI-ECPDGTVGEIWVHGDNVANGYWQKPDESERTFGGKIVTPSPGTPEGPWLRTGDSGFVTDGKMFIIGR 480 (480)
T ss_dssp SEEEEEETTTTE-ECCTTBCEEEEEESTTSCCCBTTBHHHHHHHHCBCCSSCCTTCCCCCBEEEEEEEEEETTEEEECC-
T ss_pred CEEEEEcCCCCc-CCCCCCEEEEEEeCCccccccccCcchhHHHHhhhhccccCCCCCCCeeeccceeeEECCEEEEeCC
Confidence 999999988654 4589999999999999999999999999999963322 22357899999999999999999998
No 47
>3dy5_A Allene oxide synthase-lipoxygenase protein; fusion protein, BI-functional enzyme, dioxygenase, fatty ACI biosynthesis, heme, iron; HET: HEM; 3.51A {Plexaura homomalla}
Probab=100.00 E-value=1.4e-52 Score=567.33 Aligned_cols=298 Identities=27% Similarity=0.411 Sum_probs=257.0
Q ss_pred hhheecccc-cccccccceeEEEEecCCCCCCcCcccCCCceeeEEEEecCCCCCCCcccccccccEEEeeccCCCCCCc
Q 037878 1708 TTLKVKSRY-FHRIGVSGRGQLTIYDNIQGLPDHKIFHPGKCYPVIVRHSNSLSADDDARIDARGAAIRIFSDLNGNTSS 1786 (2280)
Q Consensus 1708 ~~~~~~~R~-~Hakg~~~~G~f~v~~~~~~~~~~~~f~~g~~~p~~~RfS~~~~~~~D~~~~~rG~Aik~~~~~~~~~~~ 1786 (2280)
...+.+.|+ +||||+||+|+|+|++|+ +++++++|++|++|||++||||+++ +||+.+|+|||||||++++. ++
T Consensus 56 ~g~~~g~Rr~vHAKG~ga~G~F~v~~d~-~~t~a~~F~~gk~tpv~vRFStv~~-~Dd~~rd~RGfAvKf~t~e~---Gg 130 (1066)
T 3dy5_A 56 GTTLKGFRRATHTVGTGGIGEITIVNDP-KFPEHEFFTAGRTFPARLRHANLKY-PDDAGADARSFSIKFADSDS---DG 130 (1066)
T ss_dssp HHHTTTSSCSSSCSBCCEEEEEEECSSC-CSCCCSSSCTTCCEEEEEECBBSSC-SCTTSCCBBEEEEESSSSSS---CC
T ss_pred cCCCCCccccccCCeeeEEEEEEECCCH-HHHhhhhhcCCCEEEEEEEcCCCCC-CCCCCCCCceEEEEEEeCCC---Cc
Confidence 345666675 999999999999999999 9999999999999999999999876 56778999999999998731 34
Q ss_pred ceeeecccccccccCChhhHHHHHhhccchh-hhhhccCcchh-hhhhhcccCCCccccceeeeeeeEEEEEeCCcEEEE
Q 037878 1787 LLDLTLKTGNAFYARTIGDFATWLVCGLAAR-EEHVKRVPHIR-DAVWKSLRLSDSYAEMHYYSNICRLFRFTDGQEMYV 1864 (2280)
Q Consensus 1787 ~~D~~~~n~p~f~~~~~~~f~~~~~~~~~~~-~~~~~~~~~~~-~~~~~~~~~p~s~~~~~y~s~~~~~~~~~~g~~~~v 1864 (2280)
+|||||||+||||++|+++|++|+++++++. ..++..+|... ..+.+.+++|+||++|+|||+|||+|+|++|+.+||
T Consensus 131 n~DlV~nN~PvFfird~~~F~~fi~a~kp~~~~df~~~~Pes~~~~l~sdr~~P~s~~~m~~~s~htf~~~n~~G~~~~V 210 (1066)
T 3dy5_A 131 PLDIVMNTGEANIFWNSPSLEDFVPVEEGDAAEEYVYKNPYYYYNLVEALRRAPDTFAHLYYYSQVTMPFKAKDGKVRYC 210 (1066)
T ss_dssp SCEEEEESSSSCSCCSHHHHHTTTTCCTTHHHHHHHTSSHHHHHTHHHHBCSSCSCGGGCCEECCSCEEEECTTCCEEEE
T ss_pred eeeeeeccCCccccCCHHHHHHHHHhcCchHHHHHHhhCcHHHHHHHhccCCCCCCcccCCcccccceEEEcCCCCEEEE
Confidence 6999999999999999999999999997633 56677777663 334455899999999999999999999999999999
Q ss_pred EEEeecC------CCCC-CCCCCCcccccCCCCCCCCCCCCCCCCCccchhHHHHHHHhcCCCCceEEEEEEEeeCCCcc
Q 037878 1865 KFKLRPY------DESI-GEDSGEVEPRGILPPETGAIPRDDNDTRPLLFLADEFQRRVSSPSGVRYIFQLQIRPIPQDE 1937 (2280)
Q Consensus 1865 k~~~~P~------~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~l~vQ~~~~~d~~ 1937 (2280)
|||++|. +|++ +++.+++... -.+++.....+++|||++||+++|++|+ ++|+|+||++++++.+
T Consensus 211 Kf~~~P~~~~~~~~G~~~~l~~ee~~~~-------~~~~r~~~~~~~pd~l~~dL~~~i~~g~-p~w~l~vQl~~~~~~d 282 (1066)
T 3dy5_A 211 RYRALPGDVDIKEEDESGRLTEEEQRKI-------WIFSRHENEKRPDDYLRKEYVERLQKGP-VNYRLQIQIHEASPDD 282 (1066)
T ss_dssp EEEEEECSSCCCGGGCTTCCCHHHHHTC-------SCCSCCSSCCCCTTTTTTTTTTTTTSSC-EEEEEEEEEEECCTTC
T ss_pred EEEEEECCccccccccccCCCHHHHhhc-------cccccccccCCCccHHHHHHHHHHHcCC-ceEEEEEEEecCCcCC
Confidence 9999994 4455 4555443211 1233344556688999999999999987 9999999999976666
Q ss_pred ccccccccCCCCCCCCCCCceeeEEEEecCCCChhhhccccccCCcCCCccccccCCCcccccccccchhhHHHhhhHhh
Q 037878 1938 AMQDIALDCTKPWDEAEYPYIDVGEISIDQNLSTEESEKLEFNPYLKCNEIDVIPATTSSQSASIDHGRSLIYEICQHLR 2017 (2280)
Q Consensus 1938 ~~~~~~~D~t~~W~~~~~p~~~vg~l~i~~~~~~~~~e~l~F~P~~~~~g~~~~~~~~~~~~d~i~~~R~~~Y~~s~~~R 2017 (2280)
++ +++|+||+|||+++|+++||+|+||+|++|++|||++|||+|+++||++|+++||+|+.+|+|+|+.||+.|+++|
T Consensus 283 ~~--d~~D~Tk~Wp~~~~P~i~VG~l~Lnrn~~nae~Eq~aF~P~~~vpGi~~s~dks~~plgsI~raR~~vY~~s~~~R 360 (1066)
T 3dy5_A 283 TA--TIFHAGILWDKETHPWFDLAKVSIKTPLSPDVLEKTAFNIANQPASLGLLEAKSPEDYNSIGELRVAVYTWVQHLR 360 (1066)
T ss_dssp CG--GGGCTTSCCCGGGSCCEEEEEEEEEEECCHHHHTTCCCCTTCCCTTSCCCCCSSTTSTTHHHHHHHHHHHHHHHHH
T ss_pred CC--CCCCCCeECCcccCceEEEEEEEECCCCCcchhhhhccCccccCCCccCCCccccCCccHHHHHHHHHHHHHHHhh
Confidence 64 5899999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cCC
Q 037878 2018 NGE 2020 (2280)
Q Consensus 2018 ~~~ 2020 (2280)
+..
T Consensus 361 ~~~ 363 (1066)
T 3dy5_A 361 KLK 363 (1066)
T ss_dssp HHT
T ss_pred hcc
Confidence 553
No 48
>4gs5_A Acyl-COA synthetase (AMP-forming)/AMP-acid ligase protein; structural genomics, PSI-biology; 2.02A {Dyadobacter fermentans}
Probab=100.00 E-value=1.5e-43 Score=446.72 Aligned_cols=316 Identities=17% Similarity=0.195 Sum_probs=241.9
Q ss_pred CCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHHHcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEEeCcccc
Q 037878 634 PDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRKRYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAILFSPLTF 713 (2280)
Q Consensus 634 ~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl~~~~~~ 713 (2280)
.||+|||+|||||||+||||++||+++.+++......++++++|++++++|++|++|+. .++.++..|+++++.++..
T Consensus 36 ~d~~a~Il~TSGTTG~PKgV~~th~~l~~~~~~~~~~~~~~~~d~~l~~~pl~h~~gl~-~~~~~l~~g~~~~~~~~~~- 113 (358)
T 4gs5_A 36 GGAREFVLHTSGSTGMPKPITVTRAQLAASAAMTGKALSLGPGTRALVCLNVGYIAGLM-MLVRGMELDWELTVTEPTA- 113 (358)
T ss_dssp HTCSEEEEEEECTTSSEEEEEEEHHHHHHHHHHHHHHTTCCTTCEEEECSCTTSHHHHH-HHHHHHHHTCEEEEECCCS-
T ss_pred CCCCEEEEECCcccccCcEEEEeHHHHHHHHHHHHHHhCCCCCCEEEEECChHHHHHHH-HHHHHHHhCcEEEecCccc-
Confidence 47899999999999999999999999999999999999999999999999999999984 5778888899988876532
Q ss_pred ccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCCCCCccc
Q 037878 714 IKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFGLSQGVM 793 (2280)
Q Consensus 714 ~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g~~~~~v 793 (2280)
+ .++.++++++|++.++|+++..+++.... ..++++||.+++|||++++++.+++.+. ++++
T Consensus 114 --~---~~~~i~~~~~t~~~~~P~~l~~ll~~~~~------~~~l~~lr~v~~gG~~l~~~~~~~~~~~-------~~~~ 175 (358)
T 4gs5_A 114 --N---PLAGLDHADFDFVAMVPMQLQSILENSAT------SGQVDRLGKVLLGGAPVNHALAMQISDL-------AMPV 175 (358)
T ss_dssp --C---TTTTCSSCCCSEEEECHHHHHHHHHCTTT------GGGGGGGCSEEECSSCCCHHHHHHHHTC-------SSCE
T ss_pred --c---HHHHHHHhCCeEEEcChHHHHHhhccccc------cccCCcceEEEEcccCCCchheeccccc-------CceE
Confidence 3 35678999999999999999888754322 2568899999999999999999998752 5679
Q ss_pred ccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCc
Q 037878 794 APGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGRE 873 (2280)
Q Consensus 794 ~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p 873 (2280)
+|.||+||++..++...... ...+.+|.+.||+++.+. +.|||+++|+.+
T Consensus 176 ~~~YG~TEt~~~~~~~~~~~----------~~~g~~~~~~pgv~~~~~------------~~Gel~~~g~~~-------- 225 (358)
T 4gs5_A 176 YQSYGMTETVSHVALKALNG----------PEASELYVFLPGIQYGVD------------ERGCLHISGAVT-------- 225 (358)
T ss_dssp EEEEECGGGSSEEEEEECSS----------TTCCSCEEECTTCEEEEC------------TTSEEEEESGGG--------
T ss_pred Eeccccccccceeecccccc----------cccceeeccCCCeEEEec------------CcCceEEecccc--------
Confidence 99999999988766543221 123567778888877652 348999987521
Q ss_pred hhhHHHHhhhccCCCCCceeecCcEEEEECCeEEEEecCCCeEEECCeeechHHHHHHHH---hccCCcCCceeEE-Eec
Q 037878 874 ELSQITFRNELQNNRGRKYTRTGDLGRIIDGKFFITGRIKDLIIVAGRNVYSADVEKTVE---SSTEHIRPGCCAV-IGV 949 (2280)
Q Consensus 874 ~~t~~~f~~~~~~~~~~~~yrTGDlgr~~dG~l~~~GR~dd~IKi~G~rI~~~EIE~~L~---~~p~v~~~~~aaV-v~~ 949 (2280)
.++||||||+|+++++.++|+||+|||||++|+||+|.|||++|. +||+|.+ |+| .+.
T Consensus 226 ---------------~~g~~~TGDlg~~d~~g~~~~GR~dd~Ik~~G~~v~p~eIE~~l~~~~~~p~V~~---a~vv~~~ 287 (358)
T 4gs5_A 226 ---------------NGQTVQTNDLVEIHGNAFQWIGRADNVINSGGVKIVLDQIDQRIAAVFHHLNIGN---AFFCWWE 287 (358)
T ss_dssp ---------------TTCCEEEEEEEEECSSEEEEEEEGGGEEEETTEEEEHHHHHHHHHHHHHHHTCCC---CEEEEEE
T ss_pred ---------------cCcceecCCccccccCceEEcccccCeEEECCEEECHHHHHHHHHHhccCCCccE---EEEEEec
Confidence 148999999999985558899999999999999999999998774 5788865 444 466
Q ss_pred cccccccccccccCCCCceEEEEEEEecCCCCCCHHHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchHHHHHH
Q 037878 950 PEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVDKDVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRFECLKQ 1029 (2280)
Q Consensus 950 ~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~~L~~~ 1029 (2280)
+++.+++ .+ +++++...+....+++.++++++|+. |++|. .++.+++||+|+||||||++|+++
T Consensus 288 ~d~~~ge----------~~--~a~v~~~~~~~~~~~l~~~l~~~L~~-~~~P~---~i~~v~~lP~t~~GKi~R~~L~~~ 351 (358)
T 4gs5_A 288 PDAKLGQ----------KL--VLVIENAMPEALTERLTAEIRSRVST-YENPK---HIYFAKAFAKTQTDKIDKRATFQK 351 (358)
T ss_dssp EETTTEE----------EE--EEEEESCCCHHHHHHHHHHHHHHSCG-GGSCS---CEEEESSCCBCTTSCBCHHHHHHH
T ss_pred CCccCCE----------EE--EEEEECCCCCcCHHHHHHHHHhhCCC-CCCce---EEEEECCcCCCCCCChhHHHHHHH
Confidence 6654432 12 22222222222224555556555543 44444 344458999999999999999998
Q ss_pred hhcC
Q 037878 1030 FVDG 1033 (2280)
Q Consensus 1030 ~~~~ 1033 (2280)
+.+.
T Consensus 352 l~e~ 355 (358)
T 4gs5_A 352 LSDS 355 (358)
T ss_dssp TC--
T ss_pred hhhh
Confidence 7553
No 49
>3qov_A Phenylacetate-coenzyme A ligase; acetyl-COA synthetase-like, structural genomics, joint cente structural genomics, JCSG; HET: MSE ADP COA; 2.20A {Bacteroides thetaiotaomicron} PDB: 3s89_A*
Probab=100.00 E-value=4.3e-39 Score=419.63 Aligned_cols=329 Identities=19% Similarity=0.166 Sum_probs=251.8
Q ss_pred CCC-CCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH---HcCCCCCcEEEEEcCchhhhhHHHHHHHHHHccceEEE
Q 037878 632 SQP-DDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK---RYKSTSKTVLVSWLPQYHDMGLIGGLFTAMVGGSTAIL 707 (2280)
Q Consensus 632 ~~~-~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~h~~gl~~~i~~~L~~G~~~vl 707 (2280)
..+ +|+++|+|||||||.||||++||+++.+.+..... .+++.++|++++++|++|..+.+..++.++..|+++++
T Consensus 82 ~~~~~~~a~i~~TSGTTG~PK~v~~th~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~l~~G~~~~~ 161 (436)
T 3qov_A 82 GDMKRDGVRIHSSSGTTGNPTVIVHSQHDLDSWANLVARCLYMVGIRKTDVFQNSSGYGMFTGGLGFQYGAERLGCLTVP 161 (436)
T ss_dssp SCHHHHEEEEEECSCSSSCCCEEEEEHHHHHHHHHHHHHHHHHTTCCTTSEEEECSCCTTCHHHHHHHHHHHHHTCEEEC
T ss_pred CCCcCCeEEEEECCCcCCCCeEEEECHHHHHHHHHHHHHHHHHcCCCCCCEEEECcccccchhHHHHHHHHHHcCCEEEe
Confidence 445 89999999999999999999999999877766543 45889999999999998877777788899999999887
Q ss_pred eCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCCC
Q 037878 708 FSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPFG 787 (2280)
Q Consensus 708 ~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~g 787 (2280)
.++ .++..+++.++++++|++.++|+++..+++....... ..+++++|.+++|||++++++.+++.+.+
T Consensus 162 ~~~----~~~~~~~~~i~~~~~t~~~~~P~~~~~l~~~~~~~~~---~~~~~~lr~i~~gGe~l~~~~~~~~~~~~---- 230 (436)
T 3qov_A 162 AAA----GNSKRQIKFISDFKTTALHAIPSYAIRLAEVFQEEGI---DPRETTLKTLVIGAEPHTDEQRRKIERML---- 230 (436)
T ss_dssp CCS----CCHHHHHHHHHHHTCCEEECCHHHHHHHHHHHHHTTC---CTTSSSCCEEEEESSCCCHHHHHHHHHHH----
T ss_pred CCC----CCHHHHHHHHHHHCCCEEEECHHHHHHHHHHHHHcCC---CcccCCccEEEEeCCcCCHHHHHHHHHHh----
Confidence 653 2889999999999999999999999999877655431 12478999999999999999999999875
Q ss_pred CCCcccccccCccccccceecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCccc
Q 037878 788 LSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSAGI 867 (2280)
Q Consensus 788 ~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~ 867 (2280)
++.++|.||+||+++.++....... ...+.|.++++++|+|++++. .+|+|+.|||+|+|+
T Consensus 231 --g~~v~~~YG~TE~~~~~~~~~~~~~------------~g~~~~~~~~~v~i~d~~~g~-~~~~g~~Gel~v~~~---- 291 (436)
T 3qov_A 231 --NVKAYNSFGMTEMNGPGVAFECQEQ------------NGMHFWEDCYLVEIIDPETGE-PVPEGEIGELVLTTL---- 291 (436)
T ss_dssp --TSEEEEEEEEGGGTEEEEEEECTTC------------SSEEECTTTEEEEEECTTTCS-BCSTTCCEEEEEEES----
T ss_pred --CccEEecCcchhhcCCeeEEecCCC------------CeeEEccCceEEEEEECCCCC-CCCCCCceEEEEecc----
Confidence 5679999999999654332211110 114567789999999976554 457999999999983
Q ss_pred ccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-CC------e---EEEEecCCCeEEECCeeechHHHHHHHHhccC
Q 037878 868 GYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-DG------K---FFITGRIKDLIIVAGRNVYSADVEKTVESSTE 937 (2280)
Q Consensus 868 GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-dG------~---l~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~ 937 (2280)
|++.| ..+||||||+|+++ || . ++|+||+||+||++|+||+|.|||++|.+||+
T Consensus 292 --------~~~~~--------~~~~y~TGDl~~~~~~gc~cG~~~~~il~i~GR~dd~ik~~G~~v~p~eiE~~l~~~p~ 355 (436)
T 3qov_A 292 --------DREMM--------PLIRYRTRDLTRILPGKCPCGRTHLRIDRIKGRSDDMFIIKGVNIFPMQVEKILVQFPE 355 (436)
T ss_dssp --------SCCSS--------CCCSEEEEEEECEECSCCTTCCCSCEECCCCCBSSSCEEETTEEECHHHHHHHHTTCTT
T ss_pred --------CcCCc--------eEEEEEcCCEEEEcCCCCCCCCCccccCcccCccCCEEEECCEEECHHHHHHHHHhCcC
Confidence 22222 14799999999997 66 4 69999999999999999999999999999999
Q ss_pred CcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCC-----CHHHHHHHHHHHHHhcCcceeEEEEecCCC
Q 037878 938 HIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPV-----DKDVIENIKTRVVEEHGVTVASVKLIKPRT 1012 (2280)
Q Consensus 938 v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~-----~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~ 1012 (2280)
|.+ ++|++.+++.. ...++++++.. +... .+++.+.++++|.+++++|. .+.++.+++
T Consensus 356 v~~---~~vv~~~~~~~------------~~~l~a~v~~~-~~~~~~~~~~~~l~~~l~~~l~~~~~~p~-~i~~v~~~~ 418 (436)
T 3qov_A 356 LGS---NYLITLETVNN------------QDEMIVEVELS-DLSTDNYIELEKIRRDIIRQLKDEILVTP-KVKLVKKGS 418 (436)
T ss_dssp EEE---EEEEEEEEETT------------EEEEEEEEEEC-TTCCCCHHHHHHHHHHHHHHHHHHHSSCC-EEEEECTTC
T ss_pred cCC---cEEEEEEcCCC------------CcEEEEEEEEc-CccccchhhHHHHHHHHHHHHHHhcCCce-EEEEeCCCc
Confidence 865 77777655321 11223333333 3222 25788899999998778775 455665669
Q ss_pred ccCCCCcccchH
Q 037878 1013 MSKTTSGKIKRF 1024 (2280)
Q Consensus 1013 lP~t~sGKvdR~ 1024 (2280)
||+|+ ||++|.
T Consensus 419 lP~t~-GKi~R~ 429 (436)
T 3qov_A 419 LPQSE-GKAVRV 429 (436)
T ss_dssp CC--------CE
T ss_pred ccCcC-CcceEE
Confidence 99999 999995
No 50
>2y4o_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: DLL; 1.90A {Burkholderia cenocepacia}
Probab=100.00 E-value=2.7e-38 Score=412.95 Aligned_cols=331 Identities=19% Similarity=0.185 Sum_probs=253.4
Q ss_pred CCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHHH---HcCCCCCcEEEEEcCch-hhhhHHHHHHHHHHccceEE
Q 037878 631 ESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMRK---RYKSTSKTVLVSWLPQY-HDMGLIGGLFTAMVGGSTAI 706 (2280)
Q Consensus 631 ~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~~---~~~~~~~d~~l~~~pl~-h~~gl~~~i~~~L~~G~~~v 706 (2280)
...++++++|+|||||||.||||++||+++.+....... .+++.++|++++++|+. |..++ ..++.++..|++++
T Consensus 88 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~~~~~~~~~~-~~~~~~~~~G~~~~ 166 (443)
T 2y4o_A 88 AVPREQVVRVHASSGTTGKPTVVGYTARDIDTWANVTARSIRAAGGRPGDTLHNAFGYGLFTGGL-GIHYGAERLGCMVV 166 (443)
T ss_dssp SSCGGGCCEEEEECCSSSSCEEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHHTCEEE
T ss_pred CCChhheEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEeccCcccccHH-HHHHHHHHcCCEEE
Confidence 456789999999999999999999999998876655443 57889999999999995 55554 56788899999988
Q ss_pred EeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCC
Q 037878 707 LFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPF 786 (2280)
Q Consensus 707 l~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~ 786 (2280)
+.++ .++..+++.++++++|++.++|+++..+++........ .+++++|.+++|||++++++.+++.+.+
T Consensus 167 ~~~~----~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~---~~~~~lr~i~~gGe~l~~~~~~~~~~~~--- 236 (443)
T 2y4o_A 167 PMSG----GQTEKQVQLIRDFEPKIILVTPSYMLNLIDEMVRQGMD---PAESSLKIGIFGAEPWTQALRNEVETRV--- 236 (443)
T ss_dssp CCCS----CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC---GGGSSCCEEEEESSCCCHHHHHHHHHHH---
T ss_pred ECCC----CCHHHHHHHHHHhCCcEEEECHHHHHHHHHHHHHcCCC---cccCCceEEEECCCcCCHHHHHHHHHHh---
Confidence 7653 28999999999999999999999999988765533211 2357899999999999999999998875
Q ss_pred CCCCcccccccCccccccc-eecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCc
Q 037878 787 GLSQGVMAPGYGLAENCVF-VSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSA 865 (2280)
Q Consensus 787 g~~~~~v~n~YG~TE~~~~-~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v 865 (2280)
++.++|.||+||+++. ++..... .. .| .+.|.+++.++|+|++++ ..+|+|+.|||+|+|.
T Consensus 237 ---g~~v~~~YG~TE~~g~~~~~~~~~-~~----------~g-~~~~~~~~~~~i~d~~~g-~~~~~G~~Gel~v~~~-- 298 (443)
T 2y4o_A 237 ---GIDALDIYGLSEVMGPGVACECVE-TK----------DG-PVIWEDHFYPEIIDPVTG-EVLPDGSQGELVFTSL-- 298 (443)
T ss_dssp ---TCEEEEEEEETTTTEEEEEEECTT-TC----------CS-EEECTTTEEEEEECTTTC-CBCCTTCCEEEEEEES--
T ss_pred ---CcCEEeccCchhhcCCeEEeccCC-CC----------Cc-eEEccCCeEEEEEcCCCC-CCCCCCCceEEEEeCC--
Confidence 4679999999998543 2221111 00 12 334678999999998755 4457999999999982
Q ss_pred ccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-C-CeE-----EEEecCCCeEEECCeeechHHHHHHHHhccCC
Q 037878 866 GIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-D-GKF-----FITGRIKDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 866 ~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-d-G~l-----~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
|+++|. .+||||||+|+++ | |.+ +|+||+||+||++|+||+|.|||++|.+||+|
T Consensus 299 ----------t~~~~p--------~~~y~TGDl~~~~~~cG~~~~~l~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V 360 (443)
T 2y4o_A 299 ----------TKEAMP--------VIRYRTRDLTALLPPTARAMRRLAKITGRSDDMLIVRGVNVFPSQIEEIVVALPLL 360 (443)
T ss_dssp ----------SCSSSC--------CSSEEEEEEECEECCSSSSSCEECCCCEESSCCEEETTEEECHHHHHHHHHTSTTE
T ss_pred ----------CcccCh--------hheeecCCEEEEcCCCCCCccccCccccccCCeEEECCEEECHHHHHHHHHhCcCc
Confidence 223331 3799999999997 7 986 89999999999999999999999999999998
Q ss_pred cCCceeEEEeccccccccccccccCCCCceEEEEEEEecC--CC----CCCHHHHHHHHHHHHHhcCcceeEEEEecCCC
Q 037878 939 IRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRD--GK----PVDKDVIENIKTRVVEEHGVTVASVKLIKPRT 1012 (2280)
Q Consensus 939 ~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~--~~----~~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~ 1012 (2280)
.+ ++|++++++..+ +.+ +++++..+ +. ...+++.+.++++|++++++|. .+.++.+++
T Consensus 361 ~~---~~vv~~~~~~~~----------~~~--~a~v~~~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~p~-~v~~v~~~~ 424 (443)
T 2y4o_A 361 SG---QFQITLSRDGHM----------DRL--DLAVELRSEAAASVTDGERAALARELQHRIKTMVGVSS-GVTVLAAGG 424 (443)
T ss_dssp EE---EEEEEEEEETTE----------EEE--EEEEEECHHHHTTCCHHHHHHHHHHHHHHHHHHTCCCC-EEEEECTTC
T ss_pred Cc---cEEEEEecCCCC----------ceE--EEEEEECCcccccchhhHHHHHHHHHHHHHHHHhCCce-EEEEeCCCc
Confidence 64 677776553211 122 22222232 11 1125678889999887666664 356666789
Q ss_pred ccCCCCcccchH
Q 037878 1013 MSKTTSGKIKRF 1024 (2280)
Q Consensus 1013 lP~t~sGKvdR~ 1024 (2280)
||+|+|||++|+
T Consensus 425 lP~t~~GKi~r~ 436 (443)
T 2y4o_A 425 IPATATGKARRV 436 (443)
T ss_dssp SCCCTTSCCCSE
T ss_pred ccCccCCcceEE
Confidence 999999999996
No 51
>2y27_A Phenylacetate-coenzyme A ligase; phenylacetic acid degradation pathway; HET: MSE PG4 ATP; 1.60A {Burkholderia cenocepacia} PDB: 2y4n_A*
Probab=100.00 E-value=1.9e-37 Score=404.16 Aligned_cols=330 Identities=19% Similarity=0.178 Sum_probs=252.4
Q ss_pred CCCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHH---HHcCCCCCcEEEEEcCc-hhhhhHHHHHHHHHHccceEE
Q 037878 631 ESQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMR---KRYKSTSKTVLVSWLPQ-YHDMGLIGGLFTAMVGGSTAI 706 (2280)
Q Consensus 631 ~~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~---~~~~~~~~d~~l~~~pl-~h~~gl~~~i~~~L~~G~~~v 706 (2280)
...++++++|+|||||||.||||++||+++...+.... ..+++.++|++++.+|+ +|..++ ..++.++..|++++
T Consensus 86 ~~~~~~~~~i~~TSGTTG~PK~v~~t~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~-~~~~~~~~~G~~~~ 164 (437)
T 2y27_A 86 AVPQDRISRIHASSGTTGKPTVVGYTAADIDTWANLVARSIRAAGARRGDKVHVSYGYGLFTGGL-GAHYGAERAGLTVI 164 (437)
T ss_dssp SSCGGGCCEEEECCCTTSSCCEEEECHHHHHHHHHHHHHHHHHTTCCTTCEEEECSCCSSSHHHH-HHHHHHHHTTCEEE
T ss_pred cCChhHeEEEEECCCCCCCceEEecCHHHHHHHHHHHHHHHHHcCCCCCCEEEEcccccccccch-HHHHHHHHcCCEEE
Confidence 34678999999999999999999999999887765443 35788999999999998 566665 45788899999988
Q ss_pred EeCccccccCHHHHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEEEEecCCCCHHHHHHHHHHhcCC
Q 037878 707 LFSPLTFIKNPLLWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFLMVAAEPVRQTTVKRFVELTRPF 786 (2280)
Q Consensus 707 l~~~~~~~~~p~~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l~~gGe~l~~~l~~~~~~~~~~~ 786 (2280)
+.++ .++..+++.++++++|++.++|+++..+++........ .+++++|.+++|||++++++.+++.+.+
T Consensus 165 ~~~~----~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~~~~---~~~~~lr~i~~gGe~l~~~~~~~~~~~~--- 234 (437)
T 2y27_A 165 PFGG----GQTEKQVQLIQDFRPDIIMVTPSYMLSIADEIERQGLD---PVQSSLRIGIFGAEPWTNDMRVAIEQRM--- 234 (437)
T ss_dssp CCCS----CCHHHHHHHHHHHCCSEEEECHHHHHHHHHHHHHTTCC---GGGSSCCEEEEESSCCCHHHHHHHHHHH---
T ss_pred eCCC----CCHHHHHHHHHHhCCCEEEECHHHHHHHHHHHHHcCCC---cccCCeeEEEEcCccCCHHHHHHHHHHH---
Confidence 7653 28999999999999999999999999988765533211 1357899999999999999999998875
Q ss_pred CCCCcccccccCccccccc-eecccCCCCceeecCCCceeeccccCCCCCceEEEEcCCCCcccCCCCCeeEEEEcCCCc
Q 037878 787 GLSQGVMAPGYGLAENCVF-VSCAYGQGKPIILDWQGRVCCGYVDQNDPDVDIRIVNPETSEEIGEPGKEGEVWISSPSA 865 (2280)
Q Consensus 787 g~~~~~v~n~YG~TE~~~~-~~~~~~~~~~~~~~~~g~~~~g~vG~p~pg~~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v 865 (2280)
++.++|.||+||+++. ++..... .. .| ++.|.+++.++|+|++++ ..+|.|+.|||+|+|.
T Consensus 235 ---g~~v~~~YG~TE~~g~~~~~~~~~-~~----------~g-~~~~~~~~~~~i~d~~~g-~~~~~g~~Gel~v~~~-- 296 (437)
T 2y27_A 235 ---GIDAVDIYGLSEVMGPGVASECVE-TK----------DG-PTIWEDHFYPEIIDPETG-EVLPDGELGELVFTSL-- 296 (437)
T ss_dssp ---TSEEEEEEEETTTTEEEEEECCTT-TC----------SS-CEECTTTEEEEEECTTTC-CBCCTTCCEEEEEEES--
T ss_pred ---CcCEEecCCchhhcCCeeEEecCC-CC----------Cc-eeEccCceEEEEEcCCCC-CCCCCCCccEEEEecC--
Confidence 4679999999998543 3221111 00 11 345678999999998755 4557999999999982
Q ss_pred ccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE--CCeE-----EEEecCCCeEEECCeeechHHHHHHHHhccCC
Q 037878 866 GIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII--DGKF-----FITGRIKDLIIVAGRNVYSADVEKTVESSTEH 938 (2280)
Q Consensus 866 ~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~--dG~l-----~~~GR~dd~IKi~G~rI~~~EIE~~L~~~p~v 938 (2280)
|+++|. .+||||||+|+++ ||.+ +|+||+||+||++|+||+|.|||++|.+||+|
T Consensus 297 ----------t~~~~~--------~~~y~TGDl~~~~~~~G~~~~~i~~i~GR~~d~i~~~G~~v~p~eiE~~l~~~p~V 358 (437)
T 2y27_A 297 ----------TKEALP--------IIRYRTRDLTRLLPGTARTMRRMEKITGRSDDMMIVRGVNVFPTQIEEQLLKQRAL 358 (437)
T ss_dssp ----------SCSSSC--------CCSEEEEEEECEECCSSSSSCEECCCCEEGGGCEEETTEEECHHHHHHHHTTCTTB
T ss_pred ----------CcCCch--------hheeecCCEEEEeCCCCCCccccCccccccCCeEEECCeEECHHHHHHHHHhCcCc
Confidence 223331 3799999999996 4885 89999999999999999999999999999999
Q ss_pred cCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC----CCHHHHHHHHHHHHHhcCcceeEEEEecCCCcc
Q 037878 939 IRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP----VDKDVIENIKTRVVEEHGVTVASVKLIKPRTMS 1014 (2280)
Q Consensus 939 ~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~----~~~~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP 1014 (2280)
.+ ++|++++++.. ...++++++..++.. ..+++.+.++++|++++.+|.. +.++.+++||
T Consensus 359 ~~---~~vv~~~~~~~------------~~~l~a~v~~~~~~~~~~~~~~~l~~~l~~~l~~~~~~p~~-v~~v~~~~lP 422 (437)
T 2y27_A 359 AP---HYQIVLTKEGP------------LDVLTLNVEPCPETAPDTAAIQVAKQALAYDIKSLIGVTAV-INVLPVNGIE 422 (437)
T ss_dssp CS---CCEEEEEEETT------------EEEEEEEECBCTTTTTCHHHHHHHHHHHHHHHHHHHCCCEE-EEECCTTCSC
T ss_pred Cc---cEEEEEeecCC------------CceEEEEEEECCCccchhhhHHHHHHHHHHHHHHhcCCceE-EEEeCCCCcc
Confidence 65 66666554321 112233333333322 1256788899998886666643 5566668999
Q ss_pred CCCCcccchH
Q 037878 1015 KTTSGKIKRF 1024 (2280)
Q Consensus 1015 ~t~sGKvdR~ 1024 (2280)
+|+ ||++|+
T Consensus 423 ~t~-GKi~r~ 431 (437)
T 2y27_A 423 RSV-GKARRV 431 (437)
T ss_dssp CCS-SSCCCE
T ss_pred CCC-CcceEE
Confidence 999 999995
No 52
>3hgu_A EHPF; phenazine, antibiotic, biosynthetic protein; 1.95A {Pantoea agglomerans} PDB: 3hgv_A 3l2k_A*
Probab=99.92 E-value=7.7e-25 Score=278.41 Aligned_cols=236 Identities=14% Similarity=0.108 Sum_probs=173.1
Q ss_pred CCCCCeEEEEeccCCCCCceEEEEchHHHHHHHHHHH---HHcCCCCCcEEEEEcCc-hhhhhHHHHHHHHHHccceEEE
Q 037878 632 SQPDDLCFLQFTSGSTGDAKGVMITHGGLIHNVKLMR---KRYKSTSKTVLVSWLPQ-YHDMGLIGGLFTAMVGGSTAIL 707 (2280)
Q Consensus 632 ~~~~d~a~IiyTSGSTG~PKgV~~tH~~l~~~~~~~~---~~~~~~~~d~~l~~~pl-~h~~gl~~~i~~~L~~G~~~vl 707 (2280)
..++++++|+|||||||+||||+++|+++.+.+.+.. ..+++.++|++++++|+ +|+.++.. .+.++..|+ +++
T Consensus 88 ~~~~~~a~i~~TSGTTG~PKgv~~t~~~~~~~~~~~~~~~~~~~~~~~d~~l~~~p~g~~~~g~~~-~~~~~~~G~-~v~ 165 (369)
T 3hgu_A 88 LPADSHPQVYESGGTTGAPKYVVAYDAWIEALISWRMSGYQHRPGRPSGNTLAAIPTGPHIVGAIN-KERALRLGG-MFF 165 (369)
T ss_dssp SCTTCCCEEEEECC---CCEEEEECHHHHHHHHHHHTTTTTTSTTCCCCEEEECSCCTTCHHHHHH-HHHHHHTTS-CEE
T ss_pred CCccccEEEEECCCCCCCCCEEEECHHHHHHHHHHHHhhHHhhCCCCcceEEEecCCCchhhhHHH-HHHHHHcCC-EEE
Confidence 4678999999999999999999999999998887554 44567899999999999 99998754 455588888 444
Q ss_pred eCccccccCHH-----------------------HHHHHHhhcceeeecCcHHHHHHHHHHHhcccccccccCCCCccEE
Q 037878 708 FSPLTFIKNPL-----------------------LWLETMSKYRATHSAGPNFAFELMVRRLESSKDKVRSFDLSSMKFL 764 (2280)
Q Consensus 708 ~~~~~~~~~p~-----------------------~l~~~i~~~~vt~~~~~p~~~~~l~~~~~~~~~~~~~~~l~~Lr~l 764 (2280)
... + +|. .+++.++++++|++.++|+++..+++..... ..+++++|.+
T Consensus 166 ~~~--~--dp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~t~l~~~Ps~~~~l~~~~~~~-----~~~~~~lr~i 236 (369)
T 3hgu_A 166 SID--I--DPRWVKRSLSEGDTATVRKYTHHLVDQVQNTLMNQDIRFLVTTPPVLRELLKRPEVV-----LQMKQSLAQI 236 (369)
T ss_dssp CCC--C--CHHHHHHHHHTTCHHHHHHHHHHHHHHHHHHHHHSCEEEEEECHHHHHHHTTCHHHH-----HHHHHHCSEE
T ss_pred Ccc--C--ChHHHHHhhcccchhhhHHHHHHHHHHHHHHHHhCCCCEEEeCHHHHHHHHhhhhhh-----ccccCCeeEE
Confidence 322 2 565 7778999999999999999998887543211 1346789999
Q ss_pred EEecCCCCHHHHHHHH-HHhcCCCCCCcccccccCccccccceecccCCCCceeecCCCceeec-cccCC------CCCc
Q 037878 765 MVAAEPVRQTTVKRFV-ELTRPFGLSQGVMAPGYGLAENCVFVSCAYGQGKPIILDWQGRVCCG-YVDQN------DPDV 836 (2280)
Q Consensus 765 ~~gGe~l~~~l~~~~~-~~~~~~g~~~~~v~n~YG~TE~~~~~~~~~~~~~~~~~~~~g~~~~g-~vG~p------~pg~ 836 (2280)
++|||++++++.+++. +.+ +++.++|.||+||++++++... + ++|+| .|++
T Consensus 237 ~~gGe~l~~~~~~~~~~~~~-----p~~~v~~~YG~TE~~~~~~~~~----------------~~~~G~~~~~~~~~~~~ 295 (369)
T 3hgu_A 237 TLGGTELNLDEIKFIASEIL-----PDCEFSASYGSTSALGVSRSLL----------------ITSESQQVIYDSFSPFI 295 (369)
T ss_dssp EEESSCCCHHHHHHHHHHTC-----TTSEEEEEEEEGGGTEEEEECC----------------BCTTCSSCEEECCTTTE
T ss_pred EECCccCCHHHHHHHHHHhC-----CCcEEEcccCchhhhcceeccc----------------cccCCCcccccCCCCCe
Confidence 9999999999999999 764 4789999999999986653211 2 36777 8999
Q ss_pred eEEEEcCCCCcccCCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE---CC-------eE
Q 037878 837 DIRIVNPETSEEIGEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII---DG-------KF 906 (2280)
Q Consensus 837 ~v~Ivd~~~~~~~~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~---dG-------~l 906 (2280)
+++|+|++++ +++|+|+.|||+|++. +.+.|. -.|+|||+++.. +| .+
T Consensus 296 ~v~ivD~~~g-~~vp~G~~GEl~vt~l------------~~~~~l---------~ry~tgD~~~~~~~~~g~~~d~~~~v 353 (369)
T 3hgu_A 296 TYDVVDSITA-QTVEYGERGNVIVTHL------------SPWAFY---------PRVAERDTAIRLPGVSGFAGDRLADI 353 (369)
T ss_dssp EEEEECTTTC-SBCCTTCEEEEEEEEE------------ETTEEE---------EEEEEEEEEEEECCSTTCSSCEEEEE
T ss_pred EEEEECCCCC-cCCCCCCceEEEEEEc------------Cccccc---------ccccCCceEEEecCCCCCcCcccccc
Confidence 9999998555 4558999999999873 122221 358999999883 33 57
Q ss_pred EEEecCCCeEEECCe
Q 037878 907 FITGRIKDLIIVAGR 921 (2280)
Q Consensus 907 ~~~GR~dd~IKi~G~ 921 (2280)
..++|.|+++||.|.
T Consensus 354 ~~~~~~~~~~~i~gv 368 (369)
T 3hgu_A 354 EPLKISEGRKVIEGV 368 (369)
T ss_dssp EECC-----------
T ss_pred eeccccCCCceeeec
Confidence 788999999999884
No 53
>2b9w_A Putative aminooxidase; isomerase, conjugated linoleic acid, FAD; HET: FAD 12P; 1.95A {Propionibacterium acnes} PDB: 2b9x_A* 2b9y_A* 2ba9_A* 2bab_A* 2bac_A*
Probab=99.85 E-value=3.5e-20 Score=240.51 Aligned_cols=376 Identities=22% Similarity=0.374 Sum_probs=215.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCC-CCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecCCCCceeecccc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLG-YRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQDIKVA 97 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G-~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (2280)
++++||+|||||++||+||++|+++| + +|+|+||++++||+++|.+.+++.++.+....... .......+..++..
T Consensus 4 ~~~~~v~IIGaG~aGl~aA~~L~~~g~~-~v~v~E~~~~~GG~~~t~~~~G~~~d~G~~~~~~~--~~~~~~l~~~~g~~ 80 (424)
T 2b9w_A 4 SKDSRIAIIGAGPAGLAAGMYLEQAGFH-DYTILERTDHVGGKCHSPNYHGRRYEMGAIMGVPS--YDTIQEIMDRTGDK 80 (424)
T ss_dssp CTTCCEEEECCSHHHHHHHHHHHHTTCC-CEEEECSSSCSSTTCCCCEETTEECCSSCCCBCTT--CHHHHHHHHHHCCC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCC-cEEEEECCCCCCCcccccCCCCcccccCceeecCC--cHHHHHHHHHhCCc
Confidence 35679999999999999999999999 8 69999999999999999887654433332110000 00000000000000
Q ss_pred cc-------h--h-hhhccc-------------cccchhhhh--ccccch----hhHHHhhhhhhhHHHHHcCCCCcchh
Q 037878 98 DD-------Y--V-SVISLT-------------LELQDKAKE--SGRIGV----HAVSDLASDLTPTYLEDRGFKSVPKS 148 (2280)
Q Consensus 98 ~~-------~--~-~~~~~~-------------~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~~l~~~~~~~l~~~ 148 (2280)
.. + . ...... +........ ...+.. ............+|+.+.+.+.+...
T Consensus 81 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~ 160 (424)
T 2b9w_A 81 VDGPKLRREFLHEDGEIYVPEKDPVRGPQVMAAVQKLGQLLATKYQGYDANGHYNKVHEDLMLPFDEFLALNGCEAARDL 160 (424)
T ss_dssp CCSCCCCEEEECTTSCEECGGGCTTHHHHHHHHHHHHHHHHHTTTTTTTSSSSSSCCCGGGGSBHHHHHHHTTCGGGHHH
T ss_pred cccccccceeEcCCCCEeccccCcccchhHHHHHHHHHHHHhhhhhhcccccchhhhhhhhccCHHHHHHhhCcHHHHHH
Confidence 00 0 0 000000 000000000 000000 00001112334567766655433222
Q ss_pred hhhhhhcccccccccccHHHHHHHHhhc-----cCCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEE
Q 037878 149 VAYGYTASGYGFVQDMPYAYIHEFTRTS-----MAGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDV 223 (2280)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v 223 (2280)
.........++...+.+..+...++... ..+..+.+.+|++++++++++.++.+|++|++|++|+++++++ .|
T Consensus 161 ~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~l~~~l~~~v~~~~~V~~i~~~~~~v--~v 238 (424)
T 2b9w_A 161 WINPFTAFGYGHFDNVPAAYVLKYLDFVTMMSFAKGDLWTWADGTQAMFEHLNATLEHPAERNVDITRITREDGKV--HI 238 (424)
T ss_dssp HTTTTCCCCCCCTTTSBHHHHHHHSCHHHHHHHHHTCCBCCTTCHHHHHHHHHHHSSSCCBCSCCEEEEECCTTCE--EE
T ss_pred HHHHHHhhccCChHhcCHHHHHHhhhHhhhhcccCCceEEeCChHHHHHHHHHHhhcceEEcCCEEEEEEEECCEE--EE
Confidence 1111222233445667776654443211 1123346899999999999999988899999999999888765 57
Q ss_pred EeCCCceEEEEeCEEEEcCCcccccccccCCCCChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeE
Q 037878 224 KHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFY 303 (2280)
Q Consensus 224 ~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~ 303 (2280)
++.+| +++||+||+|+|.. .. +..++..+.++..+.++.+..+...+.....+ |...+
T Consensus 239 ~~~~g---~~~ad~Vv~a~~~~--------------~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 296 (424)
T 2b9w_A 239 HTTDW---DRESDVLVLTVPLE--------------KF--LDYSDADDDEREYFSKIIHQQYMVDACLVKEY---PTISG 296 (424)
T ss_dssp EESSC---EEEESEEEECSCHH--------------HH--TTSBCCCHHHHHHHTTCEEEEEEEEEEEESSC---CSSEE
T ss_pred EECCC---eEEcCEEEECCCHH--------------HH--hhccCCCHHHHHHHhcCCcceeEEEEEEeccC---Ccccc
Confidence 77778 48999999995544 22 11223334556667777777766555544444 32222
Q ss_pred EEecCCCCCCCCCCcceeEEee-cCC-CcEEEEecC---CCCCCChHHHHHHHHHHHHhhcCccceEEEeecCCCCcccc
Q 037878 304 YFGEYMDDPATIGHPVAMQKFF-ADT-DIFLFWSYG---NSVDITGPTVTEVAIKTVENMGGVIENVVLQRRFKYFPHVN 378 (2280)
Q Consensus 304 ~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~g---~~~~~s~~e~~~~i~~~L~~~~~~p~~~~~~~~~~~~p~~s 378 (2280)
+.+........+......... .++ .+...+..+ ...+.+++++++.++++|++++.+++.......+..+|+++
T Consensus 297 -~~~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~v~~~l~~l~~~~~~~~~~~~w~~~p~~~ 375 (424)
T 2b9w_A 297 -YVPDNMRPERLGHVMVYYHRWADDPHQIITTYLLRNHPDYADKTQEECRQMVLDDMETFGHPVEKIIEEQTWYYFPHVS 375 (424)
T ss_dssp -ECGGGGSGGGTTSCCEEEECCTTCTTSCEEEEEECCBTTBCCCCHHHHHHHHHHHHHHTTCCEEEEEEEEEEEEEEECC
T ss_pred -cccCCCCCcCCCcceEEeeecCCCCceEEEEEeccCCCcccccChHHHHHHHHHHHHHcCCcccccccccceeeeeccC
Confidence 333221111222222112112 222 233333222 12346788999999999999864433322222334588899
Q ss_pred hhhhcchhhHHHHHHhcCcCCceeccccccccccccCchhhHHhh
Q 037878 379 SKDMKDGFYDRLEYELQGQRNTYYVGGLMAFELTERNSSYSMALM 423 (2280)
Q Consensus 379 ~~~~~~g~~~~l~~~lqg~~~~~~~G~~~~~~~~~~~~~y~~~l~ 423 (2280)
++.++.|+++++ ..+|+.+++||||++++++++|+.....+...
T Consensus 376 ~~~~~~G~~~~~-~~~~~~~~l~~aG~~~~~g~~e~a~~Sg~~aA 419 (424)
T 2b9w_A 376 SEDYKAGWYEKV-EGMQGRRNTFYAGEIMSFGNFDEVCHYSKDLV 419 (424)
T ss_dssp HHHHHTTHHHHH-HHTTTGGGEEECSGGGSCSSHHHHHHHHHHHH
T ss_pred HHHHhccHHHHH-HHHhCCCCceEeccccccccHHHHHHHHHHHH
Confidence 999999999999 78999999999999999999888766665444
No 54
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.75 E-value=1.7e-17 Score=200.71 Aligned_cols=96 Identities=19% Similarity=0.201 Sum_probs=74.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||++|.|+..+ ...+.+.|||+++++.++.+..+... ......+++||++||||.+++|++|++||++|+||++|
T Consensus 125 ~~IG~~~~I~~~~--~I~~~~~ig~~~~i~~~~~i~~~~~~-~~~~~~~v~Ig~~~~IG~~~~I~~g~~IG~~~~Igags 201 (273)
T 3fs8_A 125 VYIGNYVNIHSNV--FVGEKSIIKDFVWLFPHVVLTNDPTP-PSNELLGVTIELFAVIAARSVVLPGIHINEDALVGAGA 201 (273)
T ss_dssp CEECSSCEECTTC--EECTTCEECTTCEECTTCEECCCSSS-SCSCCCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred eEECCceEECCCC--EECCCceeCCceeecCceEecCCCCC-cccccCCcEECCCeEEcCCCEEcCCCEECCCCEECCCC
Confidence 5777777777663 22345667777777777766443322 22244679999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
+|+++ +|++++|.|+||..
T Consensus 202 vV~~d--vp~~~~~~G~PA~~ 220 (273)
T 3fs8_A 202 VVTKD--VPKETVVVGNPARE 220 (273)
T ss_dssp EECSC--BCTTEEEEETTEEE
T ss_pred EECcc--CCCCcEEEecCcEE
Confidence 99999 99999999999543
No 55
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.75 E-value=1.9e-17 Score=197.74 Aligned_cols=86 Identities=16% Similarity=0.114 Sum_probs=71.0
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|+..+ ...+.+.||++|.|+.++.+. +.++||++|+||++++|+++++||++|+||++|
T Consensus 104 ~~IG~~~~I~~~~--~I~~~~~IG~~~~i~~~~~i~-----------~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~Vg~~s 170 (259)
T 3hsq_A 104 TVIGNKNYFMGNS--HVGHDCILGNNNILTHGAVLA-----------GHVTLGNFAFISGLVAVHQFCFVGDYSMVAGLA 170 (259)
T ss_dssp EEECSSCEECTTC--EECTTCEECSSCEECTTCEEC-----------TTCEECSSCEECSSEEECTTCEECTTCEECSSE
T ss_pred EEECCCcEEcCCc--EECCCcEECCccEEcCCceEC-----------CccEECCCcEEeCCCEECCCCEECCCCEECCCC
Confidence 4677777777653 223556666666666666663 678999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
+|+++ +|++++|.|+||..
T Consensus 171 ~V~~d--vp~~~~~~G~pa~~ 189 (259)
T 3hsq_A 171 KVVQD--VPPYSTVDGNPSTV 189 (259)
T ss_dssp EECSB--BCTTEEEETTTTEE
T ss_pred EEccc--CCCCcEEeccCcEE
Confidence 99999 99999999999643
No 56
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.75 E-value=1.2e-17 Score=200.09 Aligned_cols=109 Identities=17% Similarity=0.279 Sum_probs=80.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||++|.|+..+. ..+.++|||+|.|+.++.+. ++++||++|+||.+++|+++++||++++||++|
T Consensus 109 ~~IG~~~~I~~~~~--I~~~~~IG~~~~i~~~~~i~-----------~~v~Igd~~~Ig~~a~V~~~v~Ig~~a~Vg~~s 175 (266)
T 3r0s_A 109 TRIGDNAFIMAYCH--IAHDCLLGNNIILANNATLA-----------GHVELGDFTVVGGLTPIHQFVKVGEGCMIAGAS 175 (266)
T ss_dssp EEECTTCEECTTCE--ECTTCEECSSCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCEECTTCEECSSC
T ss_pred EEECCCceeCCcce--EccccccCCCeEECCCceec-----------CCeEECCCcEEccCCEECCCcEECCCCEEccCC
Confidence 46777777776532 23456666666666666663 678999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCcee------eecccchhhHHHHHhHHHHHHHHH
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPVM------IKNTMHALDDRIEEMDMKYKKIVG 1699 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~~------~~~~~~~~~~~le~~~p~~~~~v~ 1699 (2280)
+|+++ +|++++|.|+||... ++|. ...+.++.++..|+.+.+
T Consensus 176 ~V~~d--vp~~~~~~G~Pa~~~~~n~~g~~r~--~~~~~~~~l~~~~~~l~~ 223 (266)
T 3r0s_A 176 ALSQD--IVPFCLAEGNRASIRSLNLVGIRRR--FDKDEVDRLSRAFKTLFR 223 (266)
T ss_dssp BBCSC--BCTTEEEEEBTEEEEEECHHHHHHH--SCHHHHHHHHHHHHHHHS
T ss_pred eEecc--cCCCeEEeccCcEEeecchhheeec--CCHHHHHHHHHHHHHHHc
Confidence 99999 999999999996431 1222 233444555666666544
No 57
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.73 E-value=2.8e-17 Score=203.72 Aligned_cols=98 Identities=15% Similarity=0.187 Sum_probs=71.8
Q ss_pred CeeCCCceeccCCcccC--CcceEECCCcEeCCCcEE------eecccCCC-ceEeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1574 AKIGRYCSIRAINPVSC--PQQVTLGAGVHLGDFSRI------IPGFYSSI-GFIFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~--~~~~~iG~~~~i~~~~~i------~~~~~~~~-~~~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
+.||++|+|+.++.+.. .+.+.||+++.|++++.| +.+...+. ....++++||++|+||++++|.+|++||
T Consensus 201 v~IGd~v~Ig~~~~I~~~~~~~~~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig 280 (341)
T 3eh0_A 201 VIIGDRVEIGACTTIDRGALDDTIIGNGVIIDNQCQIAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEIC 280 (341)
T ss_dssp EEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEEC
T ss_pred EEECCCcEECCccEeeccccCceEeccceEECCCCEEeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEEC
Confidence 56777777776655432 234555555444444443 32222222 2345789999999999999999999999
Q ss_pred CCcEEccCccccCCCccC-CCcEEecCCCc
Q 037878 1645 RDVILGALSVAPMHSVLQ-RGGIYIGSQSP 1673 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v~-~~~~~~G~Pa~ 1673 (2280)
++++|+++|+|+++ +| +++.|.|+||.
T Consensus 281 ~~~vv~a~s~V~~~--v~~~~~~~~G~Pa~ 308 (341)
T 3eh0_A 281 DKVTVTGMGMVMRP--ITEPGVYSSGIPLQ 308 (341)
T ss_dssp SSEEECTTCEECSC--BCSCEEEECCCCCE
T ss_pred CCCEEeeCCEECCC--cCCCCeEEEecCch
Confidence 99999999999999 98 99999999953
No 58
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.73 E-value=5.1e-17 Score=194.46 Aligned_cols=87 Identities=14% Similarity=0.168 Sum_probs=73.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|+..+ ...+.+.||++|+|+.++.+. ++++||++|+||++++|+++++||++|+||++|
T Consensus 105 ~~IG~~~~I~~~~--~I~~~~~IG~~~~I~~~~~i~-----------~~v~Igd~~~Ig~~a~V~~~v~IG~~a~Ig~~s 171 (270)
T 1j2z_A 105 TLIGDKNLLMAYV--HVAHDCVIGSHCILANGVTLA-----------GHIEIGDYVNIGGLTAIHQFVRIAKGCMIAGKS 171 (270)
T ss_dssp EEECSSCEECTTC--EECTTCEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred EEECCCcEECccc--ccCCCcEECCCcEEcCCcccc-----------CccEECCCeEEecCCEECCCcEeCCceEEecCc
Confidence 5788888888763 234567777777777777764 678999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCcee
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPVM 1675 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~~ 1675 (2280)
+|++| +|++++|.|+||...
T Consensus 172 ~V~~d--vp~~~~~~G~pa~~~ 191 (270)
T 1j2z_A 172 ALGKD--VPPYCTVEGNRAFIR 191 (270)
T ss_dssp EECSB--BCTTEEEETTBTEEE
T ss_pred Eeccc--CCCCeEEecCCcEEe
Confidence 99999 999999999996443
No 59
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.73 E-value=3.8e-17 Score=199.43 Aligned_cols=53 Identities=21% Similarity=0.246 Sum_probs=50.2
Q ss_pred eeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCce
Q 037878 1620 FGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1620 ~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
.++++|||+|+||.+++|++|++||++|+||++|+|++| +|+++++.|+||..
T Consensus 166 ~g~v~Igd~~~Ig~~~~V~~~v~IG~~a~ig~gs~V~~d--vp~~~~~~G~Pa~~ 218 (305)
T 3t57_A 166 AGHVVVEDNTHTAGASVVHQFCHIGSFAFIGGGSVVSQD--VPKYMMVAGERAEL 218 (305)
T ss_dssp CTTCEECSSCEECTTCEECTTCEECTTCEECTTCEECSB--BCTTEEEETTBTEE
T ss_pred CCCCEECCceEEcCCCEEcCCeEECCCCEEcCCCeEccc--CCCCeEEecCCcEE
Confidence 478999999999999999999999999999999999999 99999999999643
No 60
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.73 E-value=1.9e-17 Score=206.34 Aligned_cols=98 Identities=14% Similarity=0.189 Sum_probs=70.2
Q ss_pred CeeCCCceeccCCcccC--CcceEECCCcEeCCCcEEe------ecccCCC-ceEeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1574 AKIGRYCSIRAINPVSC--PQQVTLGAGVHLGDFSRII------PGFYSSI-GFIFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~--~~~~~iG~~~~i~~~~~i~------~~~~~~~-~~~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
+.||++|+|+.++.+.. .+.+.||+++.|+.++.|. .+..... ....++++||++|+||++++|.+|++||
T Consensus 223 v~IGd~v~IGa~~~I~~g~~~~t~IG~~~~I~~~v~I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig 302 (372)
T 3pmo_A 223 VTIGDDVEIGANTTIDRGALSDTLIGNGVKLDNQIMIAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEIC 302 (372)
T ss_dssp EEECSSCEECTTCEEECCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEEC
T ss_pred eEECCCCEECCCcEEccCcccceEECCCCEECCCCEECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEEC
Confidence 45666666666554432 2445555555444444442 2222122 2245789999999999999999999999
Q ss_pred CCcEEccCccccCCCcc-CCCcEEecCCCc
Q 037878 1645 RDVILGALSVAPMHSVL-QRGGIYIGSQSP 1673 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v-~~~~~~~G~Pa~ 1673 (2280)
++++||++|+|+++ + |+++.|.|+||.
T Consensus 303 ~~~vI~a~s~V~k~--v~~~~~~~~G~Pa~ 330 (372)
T 3pmo_A 303 DNVFVTGMTMVTRS--ITEPGSYSSGTAMQ 330 (372)
T ss_dssp SSEEECTTCEECSC--BCSCEEECCSCCCC
T ss_pred CCCEEeeCCEEccC--cCCCCcEEEeCchH
Confidence 99999999999999 9 999999999964
No 61
>1s3e_A Amine oxidase [flavin-containing] B; human monoamine oxidase, inhibitor binding, rasagiline, enantioselectivity, oxidoreductase; HET: FAD RHP; 1.60A {Homo sapiens} SCOP: c.3.1.2 d.16.1.5 PDB: 1gos_A* 1oj9_A* 1ojb_A* 1ojc_A* 1ojd_A* 1s2q_A* 1s2y_A* 1oja_A* 1s3b_A* 2bk3_A* 2byb_A* 2c64_A* 2c65_A* 2c66_A* 2c67_A* 2c70_A* 2v5z_A* 2v60_A* 2v61_A* 2vrl_A* ...
Probab=99.72 E-value=1.7e-16 Score=211.10 Aligned_cols=247 Identities=15% Similarity=0.156 Sum_probs=142.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeec-Cccceeeeecccce-----EEecC-C----
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIE-EAGAELEEMDSHKL-----ALIDG-S---- 87 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~-~~g~~~~~~~~~~~-----~~~~~-~---- 87 (2280)
++++||+|||||++||+||++|+++|+ +|+|+|+++++||+++|.+.+ ++.++.+....... .+.+. .
T Consensus 2 ~~~~~vvIIGaG~aGL~aA~~L~~~G~-~V~vlE~~~~~GGr~~t~~~~~g~~~d~G~~~~~~~~~~~~~l~~~lgl~~~ 80 (520)
T 1s3e_A 2 SNKCDVVVVGGGISGMAAAKLLHDSGL-NVVVLEARDRVGGRTYTLRNQKVKYVDLGGSYVGPTQNRILRLAKELGLETY 80 (520)
T ss_dssp -CBCSEEEECCBHHHHHHHHHHHHTTC-CEEEECSSSSSBTTCCEECCTTTSCEESSCCEECTTCHHHHHHHHHTTCCEE
T ss_pred CCCceEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCCCCCCceeecccCCCcccccCceEecCCcHHHHHHHHHcCCcce
Confidence 345799999999999999999999998 699999999999999998874 43333322211100 00000 0
Q ss_pred ----CC-ce-eecccccchhhhhccccccchhhhhcccc-----------------chhhHHHhhhhhhhHHHHHcCCCC
Q 037878 88 ----TG-EF-QDIKVADDYVSVISLTLELQDKAKESGRI-----------------GVHAVSDLASDLTPTYLEDRGFKS 144 (2280)
Q Consensus 88 ----~~-~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------------~~~~~~~~~~~~~~~~l~~~~~~~ 144 (2280)
.. .+ ...+....+...+...... .......++ .......+......+|+.+...+.
T Consensus 81 ~~~~~~~~~~~~~g~~~~~~~~~p~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~ 159 (520)
T 1s3e_A 81 KVNEVERLIHHVKGKSYPFRGPFPPVWNP-ITYLDHNNFWRTMDDMGREIPSDAPWKAPLAEEWDNMTMKELLDKLCWTE 159 (520)
T ss_dssp ECCCSSEEEEEETTEEEEECSSSCCCCSH-HHHHHHHHHHHHHHHHHTTSCTTCGGGSTTHHHHHTSBHHHHHHHHCSSH
T ss_pred ecccCCceEEEECCEEEEecCCCCCCCCH-HHHHHHHHHHHHHHHHHhhcCcCCCccccchhhhhccCHHHHHHhhCCCH
Confidence 00 00 0000000000000000000 000000000 000001122233345555544333
Q ss_pred cchhhhhhhhc-ccccccccccHHHHHHHHhh----------ccCCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEE
Q 037878 145 VPKSVAYGYTA-SGYGFVQDMPYAYIHEFTRT----------SMAGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIR 213 (2280)
Q Consensus 145 l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~----------~~~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~ 213 (2280)
........+.. .......+.+..+...++.. ......+.++||++.+++++++.+|.+|++|++|++|+
T Consensus 160 ~~~~~~~~~~~~~~g~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~ 239 (520)
T 1s3e_A 160 SAKQLATLFVNLCVTAETHEVSALWFLWYVKQCGGTTRIISTTNGGQERKFVGGSGQVSERIMDLLGDRVKLERPVIYID 239 (520)
T ss_dssp HHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHTTTCHHHHHCSTTSTTSEEETTCTHHHHHHHHHHHGGGEESSCCEEEEE
T ss_pred HHHHHHHHHHhhhcCCChHHhHHHHHHHHHhhcCchhhhcccCCCcceEEEeCCHHHHHHHHHHHcCCcEEcCCeeEEEE
Confidence 21111111111 01123344555554443322 12345678999999999999999999999999999999
Q ss_pred EcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChhhHhhhccCCCCh
Q 037878 214 RDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQVMDMDE 271 (2280)
Q Consensus 214 ~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~~~l~~ 271 (2280)
.+++++ .+++.+| ++++||+||+|+|+.+...+.|.|+.+..+...+..+.++.
T Consensus 240 ~~~~~v--~v~~~~g--~~~~ad~VI~a~p~~~l~~l~~~p~lp~~~~~~i~~~~~~~ 293 (520)
T 1s3e_A 240 QTRENV--LVETLNH--EMYEAKYVISAIPPTLGMKIHFNPPLPMMRNQMITRVPLGS 293 (520)
T ss_dssp CSSSSE--EEEETTS--CEEEESEEEECSCGGGGGGSEEESCCCHHHHHHTTSCCBCC
T ss_pred ECCCeE--EEEECCC--eEEEeCEEEECCCHHHHcceeeCCCCCHHHHHHHHhCCCcc
Confidence 888765 5777788 47899999999999999889999999888777776555543
No 62
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.71 E-value=6.2e-17 Score=195.70 Aligned_cols=86 Identities=21% Similarity=0.244 Sum_probs=68.7
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||++|.|+.++.+ .+.+.||++|.|+.++.+. ++++||++|+||.+++|.++++||++++||++|
T Consensus 126 ~~IG~~~~I~~~~~I--~~~~~IG~~v~i~~~~~i~-----------~~v~Igd~~~Ig~~a~V~~~v~Ig~~~vvg~~s 192 (283)
T 4eqy_A 126 TTLGDDNWIMAYVHI--GHDCRVGSHVVLSSNAQMA-----------GHVEIGDWAIVGGMSGVHQYVRIGAHSMLGGAS 192 (283)
T ss_dssp EEECSSCEECTTCEE--CTTCEECSSCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred eEECCCcEECceeEE--cCCcEECCCcEECCCceEc-----------CCcEECCCeEEecCCEEcCCeEECCCcEECCCC
Confidence 456666666665322 2445666666666666553 679999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
+|+++ +|++++|.|+||..
T Consensus 193 ~V~~d--vp~~~~~~G~pa~~ 211 (283)
T 4eqy_A 193 ALVQD--IPPFVIAAGNKAEP 211 (283)
T ss_dssp EECSB--BCTTEEEETBTTEE
T ss_pred eEecc--cCCCcEEeccCcEE
Confidence 99999 99999999999643
No 63
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.70 E-value=8.1e-17 Score=200.15 Aligned_cols=97 Identities=16% Similarity=0.202 Sum_probs=72.9
Q ss_pred CeeCCCceeccCCcccCC--cceEECCCcEeCCCcEE------eecccCCC-ceEeeCeEECCCcEEccCCeeCCCcEeC
Q 037878 1574 AKIGRYCSIRAINPVSCP--QQVTLGAGVHLGDFSRI------IPGFYSSI-GFIFGKVEVQDNSVIGSQSLVLPNSVVS 1644 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~--~~~~iG~~~~i~~~~~i------~~~~~~~~-~~~~~~~~IG~~~~iG~~~~v~~g~~ig 1644 (2280)
+.||++|+|+.++.+... +.+.||+++.|++++.| +.+...+. ....+.++||++|+||.+++|.+|++||
T Consensus 206 v~IGd~v~IG~~~~I~~g~~~~t~Ig~~~~I~~~v~I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig 285 (357)
T 4e79_A 206 VLIGNDVRIGSNCSIDRGALDNTILEDGVIIDNLVQIAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIA 285 (357)
T ss_dssp EEECTTCEECTTCEECCCSSSCEEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEEC
T ss_pred EEEcCCcEEccccEEeccccCCccccCCcccCCCcccCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEEC
Confidence 578888888776655422 45566655544444444 33322222 2355679999999999999999999999
Q ss_pred CCcEEccCccccCCCcc-CCCcEEecCCC
Q 037878 1645 RDVILGALSVAPMHSVL-QRGGIYIGSQS 1672 (2280)
Q Consensus 1645 ~~~~vg~~s~v~~~~~v-~~~~~~~G~Pa 1672 (2280)
++++|+++|+|+++ + |+++.|.|+||
T Consensus 286 ~~~vv~g~s~V~~~--v~~~~~~~~G~Pa 312 (357)
T 4e79_A 286 DNVTLTGMSMVTKN--ISEAGTYSSGTGL 312 (357)
T ss_dssp SSEEECTTCEECSC--BCSCEEEECSCCC
T ss_pred CCCEEeecCEEcCc--cCCCCcEEEeCch
Confidence 99999999999999 9 99999999995
No 64
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.70 E-value=1.3e-16 Score=191.41 Aligned_cols=86 Identities=20% Similarity=0.262 Sum_probs=69.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|+.++. ..+.++||+++.|+.++.+. ++++||++|+||++++|++|++||++|+||++|
T Consensus 109 ~~IG~~~~Ig~~~~--I~~~~~Ig~~~~i~~~~~i~-----------~~v~Ig~~~~Ig~~~~I~~~v~Ig~~~~ig~~s 175 (262)
T 2qia_A 109 TKVGSDNLLMINAH--IAHDCTVGNRCILANNATLA-----------GHVSVDDFAIIGGMTAVHQFCIIGAHVMVGGCS 175 (262)
T ss_dssp EEECSSCEECTTCE--ECTTCEECSSCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCEECTTCEECSSC
T ss_pred CEECCCcEEeeeeE--ECCCCEECCCeEECCccccc-----------CCcEECCCcEEccCCEECCCCEECCCCEEccCC
Confidence 56777777766532 23456666666666666653 678999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
+|+++ +|++++|.|+||..
T Consensus 176 ~V~~~--v~~~~~~~G~pa~~ 194 (262)
T 2qia_A 176 GVAQD--VPPYVIAQGNHATP 194 (262)
T ss_dssp EECSB--BCTTEEEEEBTEEE
T ss_pred EECCc--CCCCeEEeccCceE
Confidence 99999 99999999999643
No 65
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.70 E-value=5.7e-17 Score=204.01 Aligned_cols=53 Identities=23% Similarity=0.369 Sum_probs=50.0
Q ss_pred EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1619 IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1619 ~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
..+.++||++|+||+++.|.++++||++|+||++|+|+++ +|++++|.|+||.
T Consensus 283 v~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~I~a~s~V~~~--v~~~~~~~G~pa~ 335 (374)
T 2iu8_A 283 IAGSTKIGNHVIIGGQAGITGHICIADHVIMMAQTGVTKS--ITSPGIYGGAPAR 335 (374)
T ss_dssp ECTTCEECSSCEECTTCEECSSCEECTTEEECTTCEECSC--BCSCEEEEETTEE
T ss_pred cCCCcEECCCeEEecCcEECCCcccCCCcEEccCceeecc--cCCCcEEeCCCCc
Confidence 4477999999999999999999999999999999999999 9999999999953
No 66
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.69 E-value=1.6e-16 Score=190.62 Aligned_cols=85 Identities=14% Similarity=0.203 Sum_probs=67.6
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||+++.|+..+.+ .+.+.|||+|.|+.++.+. ++++||++|+||.+++|.++++||++++||++|
T Consensus 111 ~~IG~~~~I~~~~~I--~~~~~Ig~~~~i~~~~~i~-----------~~v~Igd~~~Ig~~a~V~~~v~Ig~~~~i~~~s 177 (265)
T 4e6u_A 111 TKIGSHNLLMVNTHI--AHDCIVGDHNIFANNVGVA-----------GHVHIGDHVIVGGNSGIHQFCKIDSYSMIGGAS 177 (265)
T ss_dssp EEECSSCEECTTCEE--CTTCEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECTTCEECTTC
T ss_pred eEEccCcEEeeeeEE--cccEEECCCcEEcCCcEEC-----------CCcEECCCeEEcCCCEECCCcEECCCCEEcCCC
Confidence 456666666655322 3445555555555555553 679999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCc
Q 037878 1654 VAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
+|+++ +|++++|.|+||.
T Consensus 178 vV~~d--vp~~~~~~G~pa~ 195 (265)
T 4e6u_A 178 LILKD--VPAYVMASGNPAH 195 (265)
T ss_dssp EECSB--BCTTEEEEETTEE
T ss_pred EEccc--CCCCeEEEccCCE
Confidence 99999 9999999999964
No 67
>2ivd_A PPO, PPOX, protoporphyrinogen oxidase; porphyrin biosynthesis, chlorophyll biosynthesis, oxidoreductase, HAEM biosynthesis, heme biosynthesis; HET: ACJ FAD TWN; 2.3A {Myxococcus xanthus} SCOP: c.3.1.2 d.16.1.5 PDB: 2ive_A*
Probab=99.67 E-value=4e-16 Score=205.67 Aligned_cols=209 Identities=15% Similarity=0.192 Sum_probs=122.4
Q ss_pred CeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEe-CCCceEEEEeCEEEEcCCcccccccccCCCCC
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKH-SNGECEVMEFDKIIISGAFPVKNGKFYRSPTS 257 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t-~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~ 257 (2280)
..++.++||++.|++++++.+|++|++|++|++|+.+++++.|..++ .+| ++++||+||+|+|.....
T Consensus 228 ~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~~~~~~v~~~~~~~g--~~~~ad~vV~a~~~~~~~--------- 296 (478)
T 2ivd_A 228 GALSTFDGGLQVLIDALAASLGDAAHVGARVEGLAREDGGWRLIIEEHGRR--AELSVAQVVLAAPAHATA--------- 296 (478)
T ss_dssp CCEEEETTCTHHHHHHHHHHHGGGEESSEEEEEEECC--CCEEEEEETTEE--EEEECSEEEECSCHHHHH---------
T ss_pred ccEEEECCCHHHHHHHHHHHhhhhEEcCCEEEEEEecCCeEEEEEeecCCC--ceEEcCEEEECCCHHHHH---------
Confidence 57889999999999999999988999999999999888876444322 456 578999999996655332
Q ss_pred hhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC--cccCCceeEEEecCCCCCCCCCCcceeEEe--ecCCCcE--
Q 037878 258 KPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG--LEHLPVGFYYFGEYMDDPATIGHPVAMQKF--FADTDIF-- 331 (2280)
Q Consensus 258 ~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~--l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-- 331 (2280)
.+.. ++.......+.++.+.......+..+. ++ .+.+++++.+..++.......+....+ ..+.+..
T Consensus 297 -----~ll~-~l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~p~g~~~l 369 (478)
T 2ivd_A 297 -----KLLR-PLDDALAALVAGIAYAPIAVVHLGFDAGTLP-APDGFGFLVPAEEQRRMLGAIHASTTFPFRAEGGRVLY 369 (478)
T ss_dssp -----HHHT-TTCHHHHHHHHTCCBCCEEEEEEEECTTSSC-CCCSSEEECCGGGCCSCCEEEEHHHHCGGGBSTTCEEE
T ss_pred -----HHhh-ccCHHHHHHHhcCCCCcEEEEEEEEccccCC-CCCceEEEecCCCCCceEEEEEEcccCCCcCCCCCEEE
Confidence 2211 233333444555555555554444432 11 113455554332211111111100000 0122222
Q ss_pred EEEecCCC----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCceecc
Q 037878 332 LFWSYGNS----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTYYVG 404 (2280)
Q Consensus 332 ~~~~~g~~----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~G 404 (2280)
..+..+.. .+.+++++.+.+++.|+++.+ .|....+.+|...+|.+++..... ..++...+...+++|++|
T Consensus 370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~p~~~~~~~w~~~~p~~~~g~~~~--~~~~~~~~~~~~~l~~aG 447 (478)
T 2ivd_A 370 SCMVGGARQPGLVEQDEDALAALAREELKALAGVTARPSFTRVFRWPLGIPQYNLGHLER--VAAIDAALQRLPGLHLIG 447 (478)
T ss_dssp EEEEECTTCGGGGGSCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEESSCCBCCBTTHHHH--HHHHHHHHHTSTTEEECS
T ss_pred EEEeCCcCCccccCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEECCCcccCCCcCHHHH--HHHHHHHHhhCCCEEEEc
Confidence 22222222 246889999999999999732 355566778877778888776431 233322232257899999
Q ss_pred ccc
Q 037878 405 GLM 407 (2280)
Q Consensus 405 ~~~ 407 (2280)
.++
T Consensus 448 ~~~ 450 (478)
T 2ivd_A 448 NAY 450 (478)
T ss_dssp TTT
T ss_pred cCC
Confidence 885
No 68
>3i6d_A Protoporphyrinogen oxidase; protein-inhibitor complex, cytoplasm, FAD, flavoprotein, oxidoreductase, porphyrin biosynthesis; HET: FAD ACJ; 2.90A {Bacillus subtilis}
Probab=99.66 E-value=1.2e-15 Score=200.66 Aligned_cols=207 Identities=15% Similarity=0.223 Sum_probs=126.0
Q ss_pred CeEEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCC
Q 037878 179 GKIRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTS 257 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~ 257 (2280)
+.++.+++|++.+++++++.++ ++|++|++|++|+++++++ .|++.+| ++++||+||+|+|..+...+.+.|+
T Consensus 225 ~~~~~~~~g~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~--~v~~~~g--~~~~ad~vi~a~p~~~~~~l~~~~~-- 298 (470)
T 3i6d_A 225 GQFQTLSTGLQTLVEEIEKQLKLTKVYKGTKVTKLSHSGSCY--SLELDNG--VTLDADSVIVTAPHKAAAGMLSELP-- 298 (470)
T ss_dssp --EEEETTCTHHHHHHHHHTCCSEEEECSCCEEEEEECSSSE--EEEESSS--CEEEESEEEECSCHHHHHHHTTTST--
T ss_pred ceEEEeCChHHHHHHHHHHhcCCCEEEeCCceEEEEEcCCeE--EEEECCC--CEEECCEEEECCCHHHHHHHcCCch--
Confidence 4677899999999999999986 6899999999999988865 6777888 4789999999977775444332221
Q ss_pred hhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC--cccCCceeEEEecCCCCCCCCCCcceeEEe--ecCCCcE-E
Q 037878 258 KPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG--LEHLPVGFYYFGEYMDDPATIGHPVAMQKF--FADTDIF-L 332 (2280)
Q Consensus 258 ~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~--l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~-~ 332 (2280)
....+..+.+.......+..+. ++....+++++.+..+.....+..+....+ ..+.+.. +
T Consensus 299 ---------------~~~~~~~~~~~~~~~v~l~~~~~~~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~~l 363 (470)
T 3i6d_A 299 ---------------AISHLKNMHSTSVANVALGFPEGSVQMEHEGTGFVISRNSDFAITACTWTNKKWPHAAPEGKTLL 363 (470)
T ss_dssp ---------------THHHHHTCEEEEEEEEEEEESSTTCCCSSCSSEEEECSTTCCSEEEEEEHHHHCGGGSCTTCEEE
T ss_pred ---------------hhHHHhcCCCCceEEEEEEECchhcCCCCCCeEEEccCCCCCCceEEEEEcCcCCCcCCCCCEEE
Confidence 1223344555555554444332 112234566666554322111111111001 1122222 2
Q ss_pred EEecCCC-----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCCCCcccchhhhcchhhHHHHHHh-cCcCCceec
Q 037878 333 FWSYGNS-----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYEL-QGQRNTYYV 403 (2280)
Q Consensus 333 ~~~~g~~-----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~l-qg~~~~~~~ 403 (2280)
..+++.. .+++++++.+.++++|+++.+ .|......+|....|++++..... ..++...+ +...++|++
T Consensus 364 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~~~~w~~a~p~~~~g~~~~--~~~~~~~l~~~~~~l~~a 441 (470)
T 3i6d_A 364 RAYVGKAGDESIVDLSDNDIINIVLEDLKKVMNINGEPEMTCVTRWHESMPQYHVGHKQR--IKELREALASAYPGVYMT 441 (470)
T ss_dssp EEEECCSSCCGGGTSCHHHHHHHHHHHHGGGSCCCSCCSEEEEEEEEEEEEECBTTHHHH--HHHHHHHHHHHSTTEEEC
T ss_pred EEEECCCCCccccCCCHHHHHHHHHHHHHHHhCCCCCceEEEEEEcCCccCCCCCCHHHH--HHHHHHHHHhhCCCEEEE
Confidence 2222332 257899999999999999842 366677888887788887776531 22222223 234689999
Q ss_pred ccccc
Q 037878 404 GGLMA 408 (2280)
Q Consensus 404 G~~~~ 408 (2280)
|.++.
T Consensus 442 G~~~~ 446 (470)
T 3i6d_A 442 GASFE 446 (470)
T ss_dssp STTTS
T ss_pred eecCC
Confidence 98653
No 69
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=99.66 E-value=2e-16 Score=207.08 Aligned_cols=94 Identities=19% Similarity=0.250 Sum_probs=75.3
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
..||+++.+++.+.+. .++||++|.|+.++.+.+.. +..-.+++||++||||++++|++|++||+||+||++|
T Consensus 356 ~~i~~~~~i~~~~~i~---~~~Ig~~~~ig~~~~i~~~~----~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~igags 428 (459)
T 4fce_A 356 ARLGKGSKAGHLSYLG---DAEIGAGVNIGAGTITCNYD----GANKFKTIIGDDVFVGSDTQLVAPVTVANGATIGAGT 428 (459)
T ss_dssp EEECTTCEEEEEEEEE---EEEECTTCEECTTCEEECBC----SSCBCCEEECTTCEECTTCEEESSEEECTTCEECTTC
T ss_pred eEEcCCCEECCceEEC---CeEECCCCEECCCCEEeccc----cccCCCCEECCCeEEcCCCEEcCCcEECCCCEECCCC
Confidence 4566666665543332 37999999999999886432 2222468999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCceee
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPVMI 1676 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~~~ 1676 (2280)
+|+++ +|++++|.|+||.+..
T Consensus 429 vV~~~--v~~~~~~~G~p~~~~~ 449 (459)
T 4fce_A 429 TVTRD--VAENELVISRVKQVHI 449 (459)
T ss_dssp EECSC--BCTTCEECCCCCCCCC
T ss_pred EEccc--cCCCCEEEecccccch
Confidence 99999 9999999999964443
No 70
>3nks_A Protoporphyrinogen oxidase; FAD containing protein, PPO, variegate porphyria disease, VP oxidoreductase-oxidoreductase inhibitor complex; HET: ACJ FAD; 1.90A {Homo sapiens}
Probab=99.66 E-value=9.3e-16 Score=202.13 Aligned_cols=207 Identities=16% Similarity=0.125 Sum_probs=127.8
Q ss_pred CeEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCC
Q 037878 179 GKIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSP 255 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~ 255 (2280)
...+.++||++.++++|++.+ |++|++|++|++|++++++. +.|+++++ +++||+||+|+|...
T Consensus 224 ~~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~i~~~~~~~-~~v~~~~~---~~~ad~vv~a~p~~~--------- 290 (477)
T 3nks_A 224 WSQWSLRGGLEMLPQALETHLTSRGVSVLRGQPVCGLSLQAEGR-WKVSLRDS---SLEADHVISAIPASV--------- 290 (477)
T ss_dssp CSEEEETTCTTHHHHHHHHHHHHTTCEEECSCCCCEEEECGGGC-EEEECSSC---EEEESEEEECSCHHH---------
T ss_pred ccEEEECCCHHHHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCce-EEEEECCe---EEEcCEEEECCCHHH---------
Confidence 457889999999999998776 78999999999999887762 25566444 689999999965552
Q ss_pred CChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCC-ceeEEEecCCCCCCCCCCcceeEEeec---CCCcE
Q 037878 256 TSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLP-VGFYYFGEYMDDPATIGHPVAMQKFFA---DTDIF 331 (2280)
Q Consensus 256 ~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~ 331 (2280)
...+.. +..+.....+.++.+.......+..+. +..| .+++++.+..++....+..+....+.. .++..
T Consensus 291 -----~~~ll~-~~~~~~~~~l~~~~~~~~~~v~l~~~~-~~~~~~~~g~l~~~~~~~~~~~~~~~s~~~~~~~~~~~~~ 363 (477)
T 3nks_A 291 -----LSELLP-AEAAPLARALSAITAVSVAVVNLQYQG-AHLPVQGFGHLVPSSEDPGVLGIVYDSVAFPEQDGSPPGL 363 (477)
T ss_dssp -----HHHHSC-GGGHHHHHHHHTCCEEEEEEEEEEETT-CCCSSCSSEEECCTTTCSSEEEEECHHHHCGGGSTTTTCE
T ss_pred -----HHHhcc-ccCHHHHHHHhcCCCCcEEEEEEEECC-CCCCCCCceEEccCCCCCCceEEEEeccccCCCCCCCCce
Confidence 222211 111223334455555555444444332 1122 567777766544333332222222211 11222
Q ss_pred E-EEecCCC---------CCCChHHHHHHHHHHHHhhc---CccceEEEeecCCCCcccchhhhcchhhHHHHHHhcC-c
Q 037878 332 L-FWSYGNS---------VDITGPTVTEVAIKTVENMG---GVIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQG-Q 397 (2280)
Q Consensus 332 ~-~~~~g~~---------~~~s~~e~~~~i~~~L~~~~---~~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg-~ 397 (2280)
. ..+.+.. .+++++++.+.++++|+++. ..|....+.+|...+|+|++...+. ..++...+.. .
T Consensus 364 ~l~~~~gg~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~g~~~~~~~~~v~rw~~a~p~~~~g~~~~--~~~~~~~l~~~~ 441 (477)
T 3nks_A 364 RVTVMLGGSWLQTLEASGCVLSQELFQQRAQEAAATQLGLKEMPSHCLVHLHKNCIPQYTLGHWQK--LESARQFLTAHR 441 (477)
T ss_dssp EEEEEECHHHHHHHHHSSCCCCHHHHHHHHHHHHHHHHCCCSCCSEEEEEEEEEEEECCBTTHHHH--HHHHHHHHHHTT
T ss_pred EEEEEECCccccccccccCCCCHHHHHHHHHHHHHHHhCCCCCCcEEEEEEcCCccCCCCCCHHHH--HHHHHHHHHhcC
Confidence 2 2222321 24689999999999999963 3477788889999999999887642 3344222322 3
Q ss_pred CCceeccccc
Q 037878 398 RNTYYVGGLM 407 (2280)
Q Consensus 398 ~~~~~~G~~~ 407 (2280)
.+++++|.++
T Consensus 442 ~~l~l~G~~~ 451 (477)
T 3nks_A 442 LPLTLAGASY 451 (477)
T ss_dssp CSEEECSTTT
T ss_pred CCEEEEccCC
Confidence 5799999874
No 71
>2yg5_A Putrescine oxidase; oxidoreductase, flavin; HET: FAD; 1.90A {Rhodococcus erythropolis} PDB: 2yg6_A* 2yg3_A* 2yg4_A* 2yg7_A* 3rha_A*
Probab=99.65 E-value=2e-15 Score=197.53 Aligned_cols=241 Identities=17% Similarity=0.157 Sum_probs=135.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeeccc--------------ceEEec
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSH--------------KLALID 85 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~--------------~~~~~~ 85 (2280)
.++||+|||||++||+||++|+++|+ +|+|+|+++++||++++.+.+++.++.+..... ...+..
T Consensus 4 ~~~~v~iiG~G~~Gl~aA~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~g~~~~~g~~~~~~~~~~~~~~~~~~g~~~~~~ 82 (453)
T 2yg5_A 4 LQRDVAIVGAGPSGLAAATALRKAGL-SVAVIEARDRVGGRTWTDTIDGAVLEIGGQWVSPDQTALISLLDELGLKTFER 82 (453)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTTCCEEEETTEEEECSCCCBCTTCHHHHHHHHHTTCCEEEC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-cEEEEECCCCCCCceeccccCCceeccCCeEecCccHHHHHHHHHcCCccccc
Confidence 35799999999999999999999998 699999999999999998764432222211100 000000
Q ss_pred CCCCc-e-eec-ccccchhhhhcccccc------c------hhhhh-c--c-ccchhhHHHhhhhhhhHHHHHcCCCCcc
Q 037878 86 GSTGE-F-QDI-KVADDYVSVISLTLEL------Q------DKAKE-S--G-RIGVHAVSDLASDLTPTYLEDRGFKSVP 146 (2280)
Q Consensus 86 ~~~~~-~-~~~-~~~~~~~~~~~~~~~~------~------~~~~~-~--~-~~~~~~~~~~~~~~~~~~l~~~~~~~l~ 146 (2280)
..... . ... +....+..... .... . ..... . . .........+......+|+.+...+...
T Consensus 83 ~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~ 161 (453)
T 2yg5_A 83 YREGESVYISSAGERTRYTGDSF-PTNETTKKEMDRLIDEMDDLAAQIGAEEPWAHPLARDLDTVSFKQWLINQSDDAEA 161 (453)
T ss_dssp CCCSEEEEECTTSCEEEECSSSC-SCCHHHHHHHHHHHHHHHHHHHHHCSSCGGGSTTHHHHHSSBHHHHHHHHCSCHHH
T ss_pred ccCCCEEEEeCCCceeeccCCCC-CCChhhHHHHHHHHHHHHHHHhhcCCCCCCCCcchhhhhhccHHHHHHhhcCCHHH
Confidence 00000 0 000 00000000000 0000 0 00000 0 0 0000001112223344566555433322
Q ss_pred hhhhhhhhcccc-cccc-cccHHHHHHHHhhcc---------CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEc
Q 037878 147 KSVAYGYTASGY-GFVQ-DMPYAYIHEFTRTSM---------AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRD 215 (2280)
Q Consensus 147 ~~~~~~~~~~~~-~~~~-~~~~~~~~~~~~~~~---------~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~ 215 (2280)
......+....+ .... +.+..+...++.... ....+.++||++.+++++++.+|.+|++|++|++|+.+
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~g~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~lg~~i~~~~~V~~i~~~ 241 (453)
T 2yg5_A 162 RDNIGLFIAGGMLTKPAHSFSALQAVLMAASAGSFSHLVDEDFILDKRVIGGMQQVSIRMAEALGDDVFLNAPVRTVKWN 241 (453)
T ss_dssp HHHHHHHHCCCCCCSCTTSSBHHHHHHHHHHTTCHHHHHCHHHHTCEEETTCTHHHHHHHHHHHGGGEECSCCEEEEEEE
T ss_pred HHHHHHHHHhhcccCCcccccHHHHHHHhccCCcHhhhccCCCcceEEEcCChHHHHHHHHHhcCCcEEcCCceEEEEEe
Confidence 111111111111 1233 555555443332211 12357899999999999999999999999999999988
Q ss_pred CCc-cEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChhhHhhhccC
Q 037878 216 STT-VGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQVM 267 (2280)
Q Consensus 216 ~~~-v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~~ 267 (2280)
+++ + .|++ +| ++++||+||+|+|+.+...+.|.|+.+......+..+
T Consensus 242 ~~~~v--~v~~-~~--~~~~ad~VI~a~p~~~~~~l~~~p~lp~~~~~~i~~~ 289 (453)
T 2yg5_A 242 ESGAT--VLAD-GD--IRVEASRVILAVPPNLYSRISYDPPLPRRQHQMHQHQ 289 (453)
T ss_dssp TTEEE--EEET-TT--EEEEEEEEEECSCGGGGGGSEEESCCCHHHHHHGGGE
T ss_pred CCceE--EEEE-CC--eEEEcCEEEEcCCHHHHhcCEeCCCCCHHHHHHHhcC
Confidence 886 5 5666 56 4789999999999999888888888877765555433
No 72
>1sez_A Protoporphyrinogen oxidase, mitochondrial; FAD-binding, para-hydroxy-benzoate-hydroxylase fold (PHBH- fold), monotopic membrane-binding domain; HET: FAD OMN TON; 2.90A {Nicotiana tabacum} SCOP: c.3.1.2 d.16.1.5
Probab=99.64 E-value=9.1e-16 Score=203.60 Aligned_cols=211 Identities=17% Similarity=0.209 Sum_probs=124.5
Q ss_pred eEEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCc------cEEEEEeCCCce-EEEEeCEEEEcCCcccccccc
Q 037878 180 KIRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTT------VGVDVKHSNGEC-EVMEFDKIIISGAFPVKNGKF 251 (2280)
Q Consensus 180 ~~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~------v~V~v~t~~G~~-~~i~aD~VI~A~p~~v~~~i~ 251 (2280)
..+.++||+++|+++|++.++ .+|++|++|++|+.++++ +.|.+.+.+|+. ++++||+||+|+|+.+...+.
T Consensus 234 ~~~~~~GG~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~~~~~~~~v~~~~~~g~~~~~~~ad~VI~a~p~~~l~~ll 313 (504)
T 1sez_A 234 GSFSFLGGMQTLTDAICKDLREDELRLNSRVLELSCSCTEDSAIDSWSIISASPHKRQSEEESFDAVIMTAPLCDVKSMK 313 (504)
T ss_dssp SCBEETTCTHHHHHHHHTTSCTTTEETTCCEEEEEEECSSSSSSCEEEEEEBCSSSSCBCCCEESEEEECSCHHHHHTSE
T ss_pred ceEeeCcHHHHHHHHHHhhcccceEEcCCeEEEEEecCCCCcccceEEEEEcCCCCccceeEECCEEEECCCHHHHHHHh
Confidence 467899999999999999997 799999999999988776 666665555632 367999999998888665554
Q ss_pred cCC---CCChhhHhhhccCCCChhhHhhhccceeeeeEEEEEee--cCcccCCceeEEEecCCCCC---CCCCCcceeEE
Q 037878 252 YRS---PTSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKI--TGLEHLPVGFYYFGEYMDDP---ATIGHPVAMQK 323 (2280)
Q Consensus 252 f~p---~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~--~~l~~~p~~~~~~~~~~~~~---~~~~~~~~~~~ 323 (2280)
+.+ +.++. .+..+.+.......+.. ..++....+++++.+..+.. ...+..+....
T Consensus 314 ~~~~~~~~~~~----------------~l~~~~~~~~~~v~l~~~~~~~~~~~~~~~~l~~~~~~~~g~~~~~~~~~s~~ 377 (504)
T 1sez_A 314 IAKRGNPFLLN----------------FIPEVDYVPLSVVITTFKRENVKYPLEGFGVLVPSKEQQHGLKTLGTLFSSMM 377 (504)
T ss_dssp EESSSSBCCCT----------------TSCCCCEEEEEEEEEEEEGGGBSSCCCSSEEECCGGGGGGTCCSSEEEEHHHH
T ss_pred hcccCCcccHH----------------HHhcCCCCceEEEEEEEchhhcCCCCCceEEEcCCCCCCCCCccceEEeeccc
Confidence 321 11111 12223333322222222 21222234466665544321 11111111111
Q ss_pred ee--cCCCcEEEEec--CCC----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCCCCcccchhhhcchhhHHHHH
Q 037878 324 FF--ADTDIFLFWSY--GNS----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEY 392 (2280)
Q Consensus 324 ~~--~~~~~~~~~~~--g~~----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~ 392 (2280)
+. .+.+...+..| +.. ..++++++.+.++++|+++.+ .|......+|...+|++++...+ ....+..
T Consensus 378 ~~~~~p~g~~~l~~~~~g~~~~~~~~~~~ee~~~~v~~~L~~~~g~~~~p~~~~~~~w~~~~p~~~~g~~~--~~~~~~~ 455 (504)
T 1sez_A 378 FPDRAPNNVYLYTTFVGGSRNRELAKASRTELKEIVTSDLKQLLGAEGEPTYVNHLYWSKAFPLYGHNYDS--VLDAIDK 455 (504)
T ss_dssp CGGGSCTTEEEEEEEEESTTCGGGTTCCHHHHHHHHHHHHHHHHCBCSCCSSEEEEEEEEEEECCCTTHHH--HHHHHHH
T ss_pred cCCcCCCCCEEEEEEeCCCCcccccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEeECCCCCCccCcCHHH--HHHHHHH
Confidence 11 12233322222 221 346899999999999999843 36667777777777887776432 1233322
Q ss_pred HhcCcCCceecccccc
Q 037878 393 ELQGQRNTYYVGGLMA 408 (2280)
Q Consensus 393 ~lqg~~~~~~~G~~~~ 408 (2280)
.++...++|++|.++.
T Consensus 456 ~~~~~~~l~~aG~~~~ 471 (504)
T 1sez_A 456 MEKNLPGLFYAGNHRG 471 (504)
T ss_dssp HHHHSTTEEECCSSSS
T ss_pred HHHhCCCEEEEeecCC
Confidence 2445678999998764
No 73
>2vvm_A Monoamine oxidase N; FAD, peroxisome, flavoprotein, oxidoreductase, enantioselectivity, directed evolution variant; HET: FAD; 1.85A {Aspergillus niger} PDB: 2vvl_A* 2vvl_G*
Probab=99.64 E-value=6.8e-15 Score=194.66 Aligned_cols=358 Identities=12% Similarity=0.093 Sum_probs=183.8
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccc-----e----------EEecC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHK-----L----------ALIDG 86 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~-----~----------~~~~~ 86 (2280)
+||+|||||++||+||++|+++|+ +|+|+|+++++|||++|.+.+++.++.+....+. . .+...
T Consensus 40 ~~v~iiGaG~aGl~aA~~l~~~g~-~v~v~E~~~~~GGr~~t~~~~g~~~d~G~~~~~~~~~~~~~~l~~lgl~~~~~~~ 118 (495)
T 2vvm_A 40 WDVIVIGGGYCGLTATRDLTVAGF-KTLLLEARDRIGGRSWSSNIDGYPYEMGGTWVHWHQSHVWREITRYKMHNALSPS 118 (495)
T ss_dssp EEEEEECCBHHHHHHHHHHHHTTC-CEEEECSSSBSBTTCCEEEETTEEEECSCCCBCTTSHHHHHHHHHTTCTTCEEES
T ss_pred CCEEEECCcHHHHHHHHHHHHCCC-CEEEEeCCCCCCCcceecccCCeeecCCCeEecCccHHHHHHHHHcCCcceeecc
Confidence 799999999999999999999998 6999999999999999998765444433321110 0 00000
Q ss_pred -----CCCce-eec--ccccchhh-hhccccc-cchhhhh-----cc--------ccchhhHHHhhhhhhhHHHHHcC--
Q 037878 87 -----STGEF-QDI--KVADDYVS-VISLTLE-LQDKAKE-----SG--------RIGVHAVSDLASDLTPTYLEDRG-- 141 (2280)
Q Consensus 87 -----~~~~~-~~~--~~~~~~~~-~~~~~~~-~~~~~~~-----~~--------~~~~~~~~~~~~~~~~~~l~~~~-- 141 (2280)
....+ ... +....+.. .....+. ....... .. .........+......+|+.+.+
T Consensus 119 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~ 198 (495)
T 2vvm_A 119 FNFSRGVNHFQLRTNPTTSTYMTHEAEDELLRSALHKFTNVDGTNGRTVLPFPHDMFYVPEFRKYDEMSYSERIDQIRDE 198 (495)
T ss_dssp CCCSSSCCEEEEESSTTCCEEECHHHHHHHHHHHHHHHHCSSSSTTTTTCSCTTSTTSSTTHHHHHTSBHHHHHHHHGGG
T ss_pred cccCCCceEEEecCCCCceeecCHHHHHHHHHHHHHHHHccchhhhhhcCCCCCCcccCcchhhhhhhhHHHHHHHhhcc
Confidence 00000 000 00000000 0000000 0000000 00 00000111222233345555443
Q ss_pred CCCcchhhhhhhhc-ccccccccccHHHHHHHHhhc--------cCCeEEEEcCCHHHHHHHHHhHC---C-CceEeCcc
Q 037878 142 FKSVPKSVAYGYTA-SGYGFVQDMPYAYIHEFTRTS--------MAGKIRRFKGGYTSLWQKLSKYL---P-TEVHCNSE 208 (2280)
Q Consensus 142 ~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~gG~~~l~~~la~~l---g-~~I~l~t~ 208 (2280)
++.........+.. .......+.+...+..++... .....+.++||++.+++++++.+ | ++|++|++
T Consensus 199 ~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~l~~~g~~~i~~~~~ 278 (495)
T 2vvm_A 199 LSLNERSSLEAFILLCSGGTLENSSFGEFLHWWAMSGYTYQGCMDCLMSYKFKDGQSAFARRFWEEAAGTGRLGYVFGCP 278 (495)
T ss_dssp CCHHHHHHHHHHHHHHHSSCTTTSBHHHHHHHHHHTTSSHHHHHHHHHSEEETTCHHHHHHHHHHHHHTTTCEEEESSCC
T ss_pred CCHHHHHHHHHHHHHhcCCCcchhhHHHHHHHHHHcCCCHHHHHhhhceEEeCCCHHHHHHHHHHHhhhcCceEEEeCCE
Confidence 33211111111111 111223444444443333211 12345679999999999999876 3 56999999
Q ss_pred eEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChhhHhhhccCCCChhhHhhhccceeeeeEEE
Q 037878 209 VLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQVMDMDELEKELFSKVQTIDYYTT 288 (2280)
Q Consensus 209 V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~ 288 (2280)
|++|+.+++++ .|++.+| ++++||+||+|+|+.+...+.|.|+.++.....+..+.+....|.
T Consensus 279 V~~i~~~~~~v--~v~~~~g--~~~~ad~vI~a~~~~~l~~i~~~p~lp~~~~~ai~~~~~~~~~kv------------- 341 (495)
T 2vvm_A 279 VRSVVNERDAA--RVTARDG--REFVAKRVVCTIPLNVLSTIQFSPALSTERISAMQAGHVSMCTKV------------- 341 (495)
T ss_dssp EEEEEECSSSE--EEEETTC--CEEEEEEEEECCCGGGGGGSEEESCCCHHHHHHHHHCCCCCCEEE-------------
T ss_pred EEEEEEcCCEE--EEEECCC--CEEEcCEEEECCCHHHHhheeeCCCCCHHHHHHHHhcCCCceeEE-------------
Confidence 99999887765 6677788 478999999999999998899999988877766654444332221
Q ss_pred EEeecCcccCCceeEEEecCCCCCCCCCCcceeEEeecCCC-cEEEEecCCCCCCChHHHHHHHHHHHHhhcCc---cce
Q 037878 289 VLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFFADTD-IFLFWSYGNSVDITGPTVTEVAIKTVENMGGV---IEN 364 (2280)
Q Consensus 289 i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~g~~~~~s~~e~~~~i~~~L~~~~~~---p~~ 364 (2280)
.+..+. +.. .++...... + ..+. ........+.+ ..+..+.+....+++++..+.+++.|+++.+. |..
T Consensus 342 ~l~~~~-~~~-~~~~g~~~~-~--~~~~--~~~~~~~~~~~~~vl~~~~~~~~~~~~~e~~~~~~~~L~~~~~~~~~~~~ 414 (495)
T 2vvm_A 342 HAEVDN-KDM-RSWTGIAYP-F--NKLC--YAIGDGTTPAGNTHLVCFGNSANHIQPDEDVRETLKAVGQLAPGTFGVKR 414 (495)
T ss_dssp EEEESC-GGG-GGEEEEECS-S--CSSC--EEEEEEECTTSCEEEEEEECSTTCCCTTTCHHHHHHHHHTTSTTSCCEEE
T ss_pred EEEECC-ccC-CCceeEecC-C--CCcE--EEecCCCCCCCCeEEEEEeCccccCCCHHHHHHHHHHHHHhcCCCCCceE
Confidence 111111 000 112221111 1 0111 11111111111 12222223322356677788899999998543 344
Q ss_pred EEEeecC------CCCcccchhhhcchhhHHHHHHhcCcCCceecccccc
Q 037878 365 VVLQRRF------KYFPHVNSKDMKDGFYDRLEYELQGQRNTYYVGGLMA 408 (2280)
Q Consensus 365 ~~~~~~~------~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~G~~~~ 408 (2280)
....+|. ..++.+.+....+ +...+ .+...++|++|.++.
T Consensus 415 ~~~~~W~~dp~~~g~y~~~~~g~~~~-~~~~l---~~p~~~l~fAGe~t~ 460 (495)
T 2vvm_A 415 LVFHNWVKDEFAKGAWFFSRPGMVSE-CLQGL---REKHGGVVFANSDWA 460 (495)
T ss_dssp EEECCTTTCTTTSSSSCCCCTTHHHH-HHHHH---HCCBTTEEECCGGGC
T ss_pred EEEeEcCCCCCCCCCccCcCCCcchh-hHHHH---hCcCCCEEEechhhh
Confidence 4444553 1233444444321 12222 355678999998765
No 74
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=99.63 E-value=2.7e-15 Score=171.04 Aligned_cols=80 Identities=15% Similarity=0.182 Sum_probs=63.4
Q ss_pred eEECCCcEeCCCcEEeecccCC----CceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEec
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSS----IGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIG 1669 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~----~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G 1669 (2280)
++||++++|++++.+.+..... .....++++||++|+||.+++|++|++||++++||++|+|+++ +|++++|.|
T Consensus 70 ~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~IG~~~~I~~g~~Ig~~~~IgagsvV~~~--vp~~~v~~G 147 (192)
T 3mqg_A 70 VFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATLGANCTVVCGATIGRYAFVGAGAVVNKD--VPDFALVVG 147 (192)
T ss_dssp EEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEET
T ss_pred CEECCCCEECCceEEecccCCccccccccccCCcEECCCcEECCCCEECCCCEECCCCEEcCCCEECcc--cCCCCEEEc
Confidence 5666666666666654322211 1124478999999999999999999999999999999999999 999999999
Q ss_pred CCCcee
Q 037878 1670 SQSPVM 1675 (2280)
Q Consensus 1670 ~Pa~~~ 1675 (2280)
+||+.+
T Consensus 148 ~PAk~i 153 (192)
T 3mqg_A 148 VPARQI 153 (192)
T ss_dssp TTTEEE
T ss_pred cCCEEE
Confidence 996544
No 75
>4dgk_A Phytoene dehydrogenase; the FAD/NAD(P)-binding rossmann fold, oxidoreductase; 2.35A {Pantoea ananatis}
Probab=99.63 E-value=1.4e-15 Score=201.71 Aligned_cols=64 Identities=19% Similarity=0.170 Sum_probs=53.3
Q ss_pred CeEEEEcCCHHHHHHHHHhH---CCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcc
Q 037878 179 GKIRRFKGGYTSLWQKLSKY---LPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFP 245 (2280)
Q Consensus 179 ~~~~~~~gG~~~l~~~la~~---lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~ 245 (2280)
.+.+.++||++.|+++|++. .|++|++|++|++|..+++++ +.|++.+| ++++||.||+++++.
T Consensus 211 ~G~~~p~GG~~~l~~aL~~~~~~~Gg~I~~~~~V~~I~~~~~~~-~gV~~~~g--~~~~ad~VV~~a~~~ 277 (501)
T 4dgk_A 211 WGVWFPRGGTGALVQGMIKLFQDLGGEVVLNARVSHMETTGNKI-EAVHLEDG--RRFLTQAVASNADVV 277 (501)
T ss_dssp CCEEEETTHHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEE-EEEEETTS--CEEECSCEEECCC--
T ss_pred CCeEEeCCCCcchHHHHHHHHHHhCCceeeecceeEEEeeCCeE-EEEEecCC--cEEEcCEEEECCCHH
Confidence 45667999999999999864 589999999999999998876 46888899 589999999985444
No 76
>4gde_A UDP-galactopyranose mutase; flavin adenine dinucleotide binding, nucleotide binding, MUT isomerase; HET: FDA; 2.20A {Aspergillus fumigatus} PDB: 3ute_A* 3utg_A* 3uth_A* 4gdc_A* 4gdd_A* 3utf_A* 3ukh_A* 3ukf_A* 3uka_A* 3ukl_A* 3ukk_A* 3ukq_A* 3ukp_A*
Probab=99.62 E-value=3.1e-15 Score=199.22 Aligned_cols=200 Identities=16% Similarity=0.148 Sum_probs=114.9
Q ss_pred eEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCC
Q 037878 180 KIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPT 256 (2280)
Q Consensus 180 ~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~ 256 (2280)
..+.++||++.+++++++.+ |++|++|++|++|..++++ +++.+| ++++||+||+|+|+..
T Consensus 213 ~~~~~~gG~~~l~~~l~~~l~~~g~~i~~~~~V~~I~~~~~~----v~~~~G--~~~~ad~vI~t~P~~~---------- 276 (513)
T 4gde_A 213 FRFPARGGTGGIWIAVANTLPKEKTRFGEKGKVTKVNANNKT----VTLQDG--TTIGYKKLVSTMAVDF---------- 276 (513)
T ss_dssp EEEESSSHHHHHHHHHHHTSCGGGEEESGGGCEEEEETTTTE----EEETTS--CEEEEEEEEECSCHHH----------
T ss_pred eeecccCCHHHHHHHHHHHHHhcCeeeecceEEEEEEccCCE----EEEcCC--CEEECCEEEECCCHHH----------
Confidence 34566899999999999887 5689999999999987763 335678 5899999999976652
Q ss_pred ChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC--cccCCceeEEEecCCCCCC------------CCCC----c
Q 037878 257 SKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG--LEHLPVGFYYFGEYMDDPA------------TIGH----P 318 (2280)
Q Consensus 257 ~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~--l~~~p~~~~~~~~~~~~~~------------~~~~----~ 318 (2280)
...+ +. +.........+.|.......+.... .........++.+..+-+. ..+. .
T Consensus 277 ----l~~~--l~-~~~~~~~~~~l~y~~~~~v~l~~~~~~~~~~~~~~~~y~~~~~~~f~Ri~~~~n~sp~~~p~~~~~~ 349 (513)
T 4gde_A 277 ----LAEA--MN-DQELVGLTKQLFYSSTHVIGVGVRGSRPERIGDKCWLYFPEDNCPFYRATIFSNYSPYNQPEASAAL 349 (513)
T ss_dssp ----HHHH--TT-CHHHHHHHTTCCEEEEEEEEEEEESSCCTTTTTCCEEECCSTTCSCSEEECGGGTCGGGSCCTTCCE
T ss_pred ----HHHh--cC-chhhHhhhhcccCCceEEEEEEEeccccccccccceeeccCCCCceeEEEecCCCCcccCCCCCceE
Confidence 2222 11 1222334445555554444333221 1112222333333222110 0000 0
Q ss_pred ceeEEe----e----cCCC-cEEEE---ecCCCCCCChHHHHHHHHHHHHhhcCc-----cceEEEeecCCCCcccchhh
Q 037878 319 VAMQKF----F----ADTD-IFLFW---SYGNSVDITGPTVTEVAIKTVENMGGV-----IENVVLQRRFKYFPHVNSKD 381 (2280)
Q Consensus 319 ~~~~~~----~----~~~~-~~~~~---~~g~~~~~s~~e~~~~i~~~L~~~~~~-----p~~~~~~~~~~~~p~~s~~~ 381 (2280)
.....+ . .... ++.+. .......++++++.+.++++|.+++.. +....+.++...+|+++...
T Consensus 350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~de~l~~~~~~~L~~~~~i~~~~~i~~~~v~r~~~ayP~y~~~~ 429 (513)
T 4gde_A 350 PTMQLADGSRPQSTEAKEGPYWSIMLEVSESSMKPVNQETILADCIQGLVNTEMLKPTDEIVSTYHRRFDHGYPTPTLER 429 (513)
T ss_dssp ECCEETTSCCCSCCSEECCCEEEEEEEEEEBTTBCCCTTTHHHHHHHHHHHTTSSCTTCEEEEEEEEEEEEEEECCBTTH
T ss_pred EEEEeccCCCcccccCCcceEEEEEecccchhccCCCHHHHHHHHHHHHHHhcCCCCccceEEEEEEECCCeecccCHhH
Confidence 000000 0 0000 11111 011225689999999999999998533 33456667777899998877
Q ss_pred hcchhhHHHHHHhcCcCCceeccc
Q 037878 382 MKDGFYDRLEYELQGQRNTYYVGG 405 (2280)
Q Consensus 382 ~~~g~~~~l~~~lqg~~~~~~~G~ 405 (2280)
.+. .+++...++. .++|++|=
T Consensus 430 ~~~--~~~~~~~l~~-~~l~~~GR 450 (513)
T 4gde_A 430 EGT--LTQILPKLQD-KDIWSRGR 450 (513)
T ss_dssp HHH--HHHHHHHHHH-TTEEECST
T ss_pred HHH--HHHHHHHHhh-cCcEEecC
Confidence 653 5666555654 68999983
No 77
>3lov_A Protoporphyrinogen oxidase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: FAD; 2.06A {Exiguobacterium sibiricum}
Probab=99.61 E-value=7.2e-15 Score=193.40 Aligned_cols=206 Identities=16% Similarity=0.181 Sum_probs=125.6
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPT 256 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~ 256 (2280)
.+.++.+++|++.+++++++.++ .+|++|++|++|+++++++ .|++.+| +++||+||+|+|..+...+.+.++.
T Consensus 225 ~~~~~~~~~G~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~~--~v~~~~g---~~~ad~vV~a~p~~~~~~ll~~~~~ 299 (475)
T 3lov_A 225 TGQFLSLETGLESLIERLEEVLERSEIRLETPLLAISREDGRY--RLKTDHG---PEYADYVLLTIPHPQVVQLLPDAHL 299 (475)
T ss_dssp CCSEEEETTCHHHHHHHHHHHCSSCEEESSCCCCEEEEETTEE--EEECTTC---CEEESEEEECSCHHHHHHHCTTSCC
T ss_pred CCcEEeeCChHHHHHHHHHhhccCCEEEcCCeeeEEEEeCCEE--EEEECCC---eEECCEEEECCCHHHHHHHcCccCH
Confidence 45678999999999999999997 6899999999999988865 6778888 5899999999777654444333211
Q ss_pred ChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC-cccCCceeEEEecCCCCCCCCCCcceeEEee--cCCCcEEE
Q 037878 257 SKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG-LEHLPVGFYYFGEYMDDPATIGHPVAMQKFF--ADTDIFLF 333 (2280)
Q Consensus 257 ~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~-l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 333 (2280)
..+.++.+.......+..+. ++....+++++.+..+.....+..+....+. .+......
T Consensus 300 ------------------~~~~~~~~~~~~~v~l~~~~~~~~~~~g~g~l~~~~~~~~~~~~~~~s~~~~~~~p~~~~l~ 361 (475)
T 3lov_A 300 ------------------PELEQLTTHSTATVTMIFDQQQSLPIEGTGFVVNRRAPYSITACTAIDQKWNHSAPDHTVLR 361 (475)
T ss_dssp ------------------HHHHTCCEEEEEEEEEEEECCSSCSSSSSEEEECTTSSCSEEEEEEHHHHCTTTCTTEEEEE
T ss_pred ------------------HHHhcCCCCeEEEEEEEECCcCCCCCCCEEEEecCCCCCceEEEEEEcccCCCCCCCcEEEE
Confidence 22334444444444433322 2111245666665543222111111111111 11111111
Q ss_pred EecCCC-----CCCChHHHHHHHHHHHHhhcC---ccceEEEeecCCCCcccchhhhcchhhHHHHHHh-cCcCCceecc
Q 037878 334 WSYGNS-----VDITGPTVTEVAIKTVENMGG---VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYEL-QGQRNTYYVG 404 (2280)
Q Consensus 334 ~~~g~~-----~~~s~~e~~~~i~~~L~~~~~---~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~l-qg~~~~~~~G 404 (2280)
.+.+.. .+++++++++.+++.|+++.+ .|....+.+|....|++++..... ..++...+ +...++|++|
T Consensus 362 ~~~~~~~~~~~~~~~~e~~~~~~~~~L~~~~g~~~~p~~~~v~~w~~a~p~~~~g~~~~--~~~~~~~l~~~~~~l~~aG 439 (475)
T 3lov_A 362 AFVGRPGNDHLVHESDEVLQQAVLQDLEKICGRTLEPKQVIISRLMDGLPAYTVGHADR--IQRVREEVLAQYPGIYLAG 439 (475)
T ss_dssp EEECBTTBCGGGGSCHHHHHHHHHHHHHHHHSSCCCCSEEEEEEEEEEEECCCTTHHHH--HHHHHHHHHHHSTTEEECS
T ss_pred EEeCCCCCCcccCCCHHHHHHHHHHHHHHHhCCCCCCeEEEEEEcccCCCCCCCChHHH--HHHHHHHHHhhCCCEEEEc
Confidence 222322 347899999999999999832 367777888887788888776431 22231222 2346899999
Q ss_pred cccc
Q 037878 405 GLMA 408 (2280)
Q Consensus 405 ~~~~ 408 (2280)
.++.
T Consensus 440 ~~~~ 443 (475)
T 3lov_A 440 LAYD 443 (475)
T ss_dssp TTTS
T ss_pred cCCC
Confidence 7654
No 78
>3nrn_A Uncharacterized protein PF1083; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: AMP; 2.10A {Pyrococcus furiosus}
Probab=99.61 E-value=1.2e-14 Score=187.89 Aligned_cols=349 Identities=14% Similarity=0.086 Sum_probs=164.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecC-CCC----ceeeccc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDG-STG----EFQDIKV 96 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~-~~~----~~~~~~~ 96 (2280)
+||+|||||++||+||++|+++|+ +|+|+||++++||++++.+.+++.++.++.. +... ... .+..++.
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~-~V~vlE~~~~~GG~~~~~~~~g~~~d~G~~~-----~~~~~~~~~~~~l~~~lg~ 74 (421)
T 3nrn_A 1 MRAVVVGAGLGGLLAGAFLARNGH-EIIVLEKSAMIGGRFTNLPYKGFQLSTGALH-----MIPHGEDGPLAHLLRILGA 74 (421)
T ss_dssp CEEEEESCSHHHHHHHHHHHHTTC-EEEEECSSSSSCTTSSEEEETTEEEESSSCS-----EETTTTSSHHHHHHHHHTC
T ss_pred CcEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCCCceeEEeccCCEEEecCCeE-----EEccCCChHHHHHHHHhCC
Confidence 589999999999999999999998 6999999999999999988776554433210 0000 000 0000000
Q ss_pred ------------------ccchhhhhccccccchhhhhccccchhhHH-Hh--hhhhhhHHHHHcCCCCcc-hhhhhhhh
Q 037878 97 ------------------ADDYVSVISLTLELQDKAKESGRIGVHAVS-DL--ASDLTPTYLEDRGFKSVP-KSVAYGYT 154 (2280)
Q Consensus 97 ------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~--~~~~~~~~l~~~~~~~l~-~~~~~~~~ 154 (2280)
..++..... .+. ................ .. ......+++.+.++..-. ......+.
T Consensus 75 ~~~~~~~~~~~~~~~~g~~~~~~~~~~-~l~-~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~g~~~~~~~~~~~~~~ 152 (421)
T 3nrn_A 75 KVEIVNSNPKGKILWEGKIFHYRESWK-FLS-VKEKAKALKLLAEIRMNKLPKEEIPADEWIKEKIGENEFLLSVLESFA 152 (421)
T ss_dssp CCCEEECSSSCEEEETTEEEEGGGGGG-GCC---------CCHHHHHTTCCCCCCSBHHHHHHHHTCCCHHHHHHHHHHH
T ss_pred cceEEECCCCeEEEECCEEEEcCCchh-hCC-HhHHHHHHHHHHHHHhccCCCCCCCHHHHHHHhcCCcHHHHHHHHHHH
Confidence 000000000 000 0000000000000000 00 002223455444332211 00010000
Q ss_pred cc-cccccccccHHHHHHHHhh-ccCCeEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEEeCCCc
Q 037878 155 AS-GYGFVQDMPYAYIHEFTRT-SMAGKIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKHSNGE 229 (2280)
Q Consensus 155 ~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~ 229 (2280)
.. ........+.......+.. ...+.++.+++|++.+.++|++.+ |++|++|++|++|..+++++ +.+ +|
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~v---V~~-~g- 227 (421)
T 3nrn_A 153 GWADSVSLSDLTALELAKEIRAALRWGGPGLIRGGCKAVIDELERIIMENKGKILTRKEVVEINIEEKKV---YTR-DN- 227 (421)
T ss_dssp HHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTCHHHHHHHHHHHHHTTTCEEESSCCEEEEETTTTEE---EET-TC-
T ss_pred HHhcCCCcccCCHHHHHHHHHHHhhcCCcceecCCHHHHHHHHHHHHHHCCCEEEcCCeEEEEEEECCEE---EEe-CC-
Confidence 00 1122334444333222211 112345678999999999998754 78999999999999888765 443 56
Q ss_pred eEEEEeCEEEEcCCcccccccccCCCCChhhHhhhcc-CCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEEecC
Q 037878 230 CEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQV-MDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYFGEY 308 (2280)
Q Consensus 230 ~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~-~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~~~~ 308 (2280)
++++||+||+|++.. ....+.. -.+.......+.++.+...+...+..+.-+ ++....++.+.
T Consensus 228 -~~~~ad~Vv~a~~~~--------------~~~~ll~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~-~~~~~~~~~~~ 291 (421)
T 3nrn_A 228 -EEYSFDVAISNVGVR--------------ETVKLIGRDYFDRDYLKQVDSIEPSEGIKFNLAVPGEP-RIGNTIVFTPG 291 (421)
T ss_dssp -CEEECSEEEECSCHH--------------HHHHHHCGGGSCHHHHHHHHTCCCCCEEEEEEEEESSC-SSCSSEEECTT
T ss_pred -cEEEeCEEEECCCHH--------------HHHHhcCcccCCHHHHHHHhCCCCCceEEEEEEEcCCc-ccCCeEEEcCC
Confidence 478999999995444 3323322 112222222334444443222222222211 22222233322
Q ss_pred CCCCCCCCCcceeEEeecCCCcEEEEecCCCCCCChHHHHHHHHHHHHhhcCccceEEEeecCCCCcccchhhhcchhhH
Q 037878 309 MDDPATIGHPVAMQKFFADTDIFLFWSYGNSVDITGPTVTEVAIKTVENMGGVIENVVLQRRFKYFPHVNSKDMKDGFYD 388 (2280)
Q Consensus 309 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~s~~e~~~~i~~~L~~~~~~p~~~~~~~~~~~~p~~s~~~~~~g~~~ 388 (2280)
.+ ......+........+.+...++.+......++++..+.++++|+++-+..+...+.++...+|++....-.
T Consensus 292 ~~-~~~i~~~s~~~p~~ap~G~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~p~~~~~~~~~~~~~~p~~~~~~~~----- 365 (421)
T 3nrn_A 292 LM-INGFNEPSALDKSLAREGYTLIMAHMALKNGNVKKAIEKGWEELLEIFPEGEPLLAQVYRDGNPVNRTRAGL----- 365 (421)
T ss_dssp SS-SCEEECGGGTCGGGSCTTEEEEEEEEECTTCCHHHHHHHHHHHHHHHCTTCEEEEEEEC------------------
T ss_pred cc-eeeEeccCCCCCCcCCCCceEEEEEEeeccccHHHHHHHHHHHHHHHcCCCeEEEeeeccCCCCcccccCCC-----
Confidence 21 000000111111112334333333322122334566899999999986666667777777777777332211
Q ss_pred HHHHHhcCcCCceecccccc
Q 037878 389 RLEYELQGQRNTYYVGGLMA 408 (2280)
Q Consensus 389 ~l~~~lqg~~~~~~~G~~~~ 408 (2280)
++ . ... +++|+||.+..
T Consensus 366 ~~-~-~~~-~gl~laGd~~~ 382 (421)
T 3nrn_A 366 HI-E-WPL-NEVLVVGDGYR 382 (421)
T ss_dssp CC-C-CCC-SSEEECSTTCC
T ss_pred CC-C-CCC-CcEEEECCccc
Confidence 23 2 344 88999998764
No 79
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.61 E-value=2.2e-15 Score=197.00 Aligned_cols=94 Identities=14% Similarity=0.133 Sum_probs=75.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.++....+ ..++||++|+||.++.+.++.. ...+.++||++|+||++++|.+|++||+||+||++|
T Consensus 353 ~~i~~~~~i~~~~~~---~~~~Ig~~v~Ig~~~~i~~~~~----~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s 425 (456)
T 2v0h_A 353 STVGKGSKVNHLTYV---GDSEIGSNCNIGAGVITCNYDG----ANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGT 425 (456)
T ss_dssp CEECTTCEEEEEEEE---ESEEECTTCEECTTCEEEECSS----SSCCCEEECSSCEECTTCEEEESEEECTTCEECTTC
T ss_pred cEECCCCEeccceee---cCcEECCCcEECCceEEecccc----ccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCC
Confidence 456666666554322 2489999999999999865321 222478999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCceee
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPVMI 1676 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~~~ 1676 (2280)
+|+++ +|++++|.|+||....
T Consensus 426 ~v~~~--v~~~~~~~G~pa~~~~ 446 (456)
T 2v0h_A 426 TITRD--VGENELVITRVAQRHI 446 (456)
T ss_dssp EECSC--BCTTCEECCCCCCCCC
T ss_pred EECCC--cCCCCEEEccCceehh
Confidence 99999 9999999999965443
No 80
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=99.60 E-value=5e-15 Score=194.15 Aligned_cols=92 Identities=18% Similarity=0.213 Sum_probs=77.1
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.|+..+.+ ..++||++|.||.++.+.++.. ....+++||++|+||++++|.+|++||++++||++|
T Consensus 361 ~~Ig~~~~i~~~~~i---~~~~Ig~~~~Ig~~~~i~~~~~----~~~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~i~~~s 433 (468)
T 1hm9_A 361 SSIGENTKAGHLTYI---GNCEVGSNVNFGAGTITVNYDG----KNKYKTVIGDNVFVGSNSTIIAPVELGDNSLVGAGS 433 (468)
T ss_dssp CEECTTCEEEEEEEE---ESEEECTTCEECTTCEEECBCS----SCBCCEEECTTCEECTTCEEESSCEECTTCEECTTC
T ss_pred eEEcCCcEeCCceEE---ccccccCCcEECCCcEEecCcC----ccCCCcEECCCeEECCCCEEeCCcEECCCCEECCCC
Confidence 568888888765433 2489999999999998865422 222479999999999999999999999999999999
Q ss_pred cccCCCccCCCcEEecCCCce
Q 037878 1654 VAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1654 ~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
+|+++ +|++++|.|+||..
T Consensus 434 ~v~~~--v~~~~~~~G~pa~~ 452 (468)
T 1hm9_A 434 TITKD--VPADAIAIGRGRQI 452 (468)
T ss_dssp EECSC--BCTTCEECCSCCCC
T ss_pred EECCC--CCCCCEEEcCccee
Confidence 99999 99999999999644
No 81
>2iid_A L-amino-acid oxidase; flavoenzyme, FAD binding domain, reaction mechanism, sustrat binding, oxidoreductase; HET: NAG FUC PHE FAD; 1.80A {Calloselasma rhodostoma} SCOP: c.3.1.2 d.16.1.5 PDB: 1f8s_A* 1f8r_A* 1reo_A* 1tdk_A* 1tdn_A* 1tdo_A* 3kve_A* 4e0v_A*
Probab=99.60 E-value=1.3e-14 Score=191.97 Aligned_cols=93 Identities=13% Similarity=0.144 Sum_probs=75.7
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCc--eEEEEeCEEEEcCCcccccccccCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGE--CEVMEFDKIIISGAFPVKNGKFYRSP 255 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~--~~~i~aD~VI~A~p~~v~~~i~f~p~ 255 (2280)
...++.++||+++|+++|++.++.+|++|++|++|+.+++++.|. +.+|+ .++++||+||+|+|+.+...+.|.|+
T Consensus 230 ~~~~~~~~gG~~~l~~~l~~~l~~~i~~~~~V~~I~~~~~~v~v~--~~~~~~~~~~~~ad~vI~t~p~~~~~~i~f~p~ 307 (498)
T 2iid_A 230 EKRFDEIVDGMDKLPTAMYRDIQDKVHFNAQVIKIQQNDQKVTVV--YETLSKETPSVTADYVIVCTTSRAVRLIKFNPP 307 (498)
T ss_dssp CCCEEEETTCTTHHHHHHHHHTGGGEESSCEEEEEEECSSCEEEE--EECSSSCCCEEEESEEEECSCHHHHTTSEEESC
T ss_pred CcceEEeCCcHHHHHHHHHHhcccccccCCEEEEEEECCCeEEEE--EecCCcccceEEeCEEEECCChHHHhheecCCC
Confidence 456778999999999999999977999999999999988876444 43442 12589999999999999889999999
Q ss_pred CChhhHhhhccCCCChh
Q 037878 256 TSKPTESETQVMDMDEL 272 (2280)
Q Consensus 256 ~~~~~~~~l~~~~l~~~ 272 (2280)
+++.+...+..+.++..
T Consensus 308 Lp~~~~~ai~~l~~~~~ 324 (498)
T 2iid_A 308 LLPKKAHALRSVHYRSG 324 (498)
T ss_dssp CCHHHHHHHHHCCEECE
T ss_pred CCHHHHHHHHhCCCcce
Confidence 98888777765555443
No 82
>3ka7_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; HET: FAD; 1.80A {Methanosarcina mazei}
Probab=99.59 E-value=5.8e-15 Score=191.45 Aligned_cols=359 Identities=12% Similarity=0.086 Sum_probs=169.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecCCCCceeecccccchh
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQDIKVADDYV 101 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (2280)
+||+|||||++||+||++|+++|+ +|+||||++++||+++++..+++.++.++...............+..++......
T Consensus 1 ~dVvVIGaGiaGLsaA~~La~~G~-~V~vlE~~~~~GG~~~~~~~~G~~~d~G~~~~~~~~~~~~~~~l~~~lg~~~~~~ 79 (425)
T 3ka7_A 1 MKTVVIGAGLGGLLSAARLSKAGH-EVEVFERLPITGGRFTNLSYKGFQLSSGAFHMLPNGPGGPLACFLKEVEASVNIV 79 (425)
T ss_dssp CEEEEECCBHHHHHHHHHHHHTTC-EEEEECSSSSSBTTSSEEEETTEEEESSSCSCBTTGGGSHHHHHHHHTTCCCCEE
T ss_pred CcEEEECCCHHHHHHHHHHHhCCC-ceEEEeCCCCCCCceeeeccCCcEEcCCCceEecCCCccHHHHHHHHhCCCceEE
Confidence 589999999999999999999998 7999999999999999987766544433211000000000000000000000000
Q ss_pred ----hhhc----------------cccccchhhh---hccccchhhH----HHhhhhhhhHHHHHcCCCCcchhhhhhhh
Q 037878 102 ----SVIS----------------LTLELQDKAK---ESGRIGVHAV----SDLASDLTPTYLEDRGFKSVPKSVAYGYT 154 (2280)
Q Consensus 102 ----~~~~----------------~~~~~~~~~~---~~~~~~~~~~----~~~~~~~~~~~l~~~~~~~l~~~~~~~~~ 154 (2280)
.... .......... ...+...... .........+|+.+..-..........+.
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~~~l~~~~~~~~~~~~~~~~~ 159 (425)
T 3ka7_A 80 RSEMTTVRVPLKKGNPDYVKGFKDISFNDFPSLLSYKDRMKIALLIVSTRKNRPSGSSLQAWIKSQVSDEWLIKFADSFC 159 (425)
T ss_dssp ECCCCEEEEESSTTCCSSTTCEEEEEGGGGGGGSCHHHHHHHHHHHHHTTTSCCCSSBHHHHHHHHCCCHHHHHHHHHHH
T ss_pred ecCCceEEeecCCCcccccccccceehhhhhhhCCHHHHHHHHHHHHhhhhcCCCCCCHHHHHHHhcCCHHHHHHHHHHH
Confidence 0000 0000000000 0000000000 00001122344443311111111110111
Q ss_pred cc-cccccccccHHHHHHHHhh-ccCCeEEEEcCCHHHHHHHHHhHC---CCceEeCcceEEEEEcCCccEEEEEeCCCc
Q 037878 155 AS-GYGFVQDMPYAYIHEFTRT-SMAGKIRRFKGGYTSLWQKLSKYL---PTEVHCNSEVLAIRRDSTTVGVDVKHSNGE 229 (2280)
Q Consensus 155 ~~-~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~gG~~~l~~~la~~l---g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~ 229 (2280)
.. ........+.......+.. ...+..+.++||++.+.++|++.+ |++|++|++|++|..+++++ ..|+++ |
T Consensus 160 ~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~gG~~~l~~~l~~~~~~~G~~i~~~~~V~~i~~~~~~~-~gv~~~-g- 236 (425)
T 3ka7_A 160 GWALSLKSDEVPVEEVFEIIENMYRFGGTGIPEGGCKGIIDALETVISANGGKIHTGQEVSKILIENGKA-AGIIAD-D- 236 (425)
T ss_dssp HHHHSSCGGGSBHHHHHHHHHHHHHHCSCEEETTSHHHHHHHHHHHHHHTTCEEECSCCEEEEEEETTEE-EEEEET-T-
T ss_pred HHHhCCCcccchHHHHHHHHHHHHhcCCccccCCCHHHHHHHHHHHHHHcCCEEEECCceeEEEEECCEE-EEEEEC-C-
Confidence 00 1122334444333222221 122455678999999999998654 88999999999999988865 235554 6
Q ss_pred eEEEEeCEEEEcCCcccccccccCCCCChhhHhhhcc-C-CC--ChhhHhhhccceeeeeEEEEEeecCcccCCceeEEE
Q 037878 230 CEVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQV-M-DM--DELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYF 305 (2280)
Q Consensus 230 ~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~-~-~l--~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~ 305 (2280)
++++||+||+|+|.. ....+.. . .+ .......+.++.+.......+..+.-+ .+....++
T Consensus 237 -~~~~ad~VV~a~~~~--------------~~~~ll~~~~~~~~~~~~~~~~~~~~~~~~~~v~l~~~~~~-~~~~~~~~ 300 (425)
T 3ka7_A 237 -RIHDADLVISNLGHA--------------ATAVLCSEALSKEADAAYFKMVGTLQPSAGIKICLAADEPL-VGHTGVLL 300 (425)
T ss_dssp -EEEECSEEEECSCHH--------------HHHHHTTTTCCTTTTHHHHHHHHHCCCBEEEEEEEEESSCS-SCSSSEEE
T ss_pred -EEEECCEEEECCCHH--------------HHHHhcCCcccccCCHHHHHHhhCcCCCceEEEEeecCCCc-cCcCEEEE
Confidence 579999999996554 2222211 1 01 121222223333333222222222211 11111112
Q ss_pred ecCCCCCCCCC--CcceeEEeecCCCcEEEEec--CCCCCC-ChHHHHHHHHHHHHhhc--CccceEEEeecCCCCcccc
Q 037878 306 GEYMDDPATIG--HPVAMQKFFADTDIFLFWSY--GNSVDI-TGPTVTEVAIKTVENMG--GVIENVVLQRRFKYFPHVN 378 (2280)
Q Consensus 306 ~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~--g~~~~~-s~~e~~~~i~~~L~~~~--~~p~~~~~~~~~~~~p~~s 378 (2280)
..... ...+ .+.....-..+.+..+++.+ ....+. .+++..+.++++|+++- ..++...+.+|....|++.
T Consensus 301 ~~~~~--~~~~~~~~s~~~p~~ap~G~~~l~~~~~~~~~~~~~~~~~~~~~~~~l~~~~p~~~~~~~~v~~~~~~~P~~~ 378 (425)
T 3ka7_A 301 TPYTR--RINGVNEVTQADPELAPPGKHLTMCHQYVAPENVKNLESEIEMGLEDLKEIFPGKRYEVLLIQSYHDEWPVNR 378 (425)
T ss_dssp CCSSS--SEEEEECGGGTCGGGSCTTCEEEEEEEEECGGGGGGHHHHHHHHHHHHHHHSTTCCEEEEEEEEEBTTBCSBS
T ss_pred CCChh--hcceEEeccCCCCCcCCCCCeEEEEEeccccccccchHHHHHHHHHHHHHhCCCCceEEEEEEEECCCccccc
Confidence 11111 0100 00001111123333332222 111111 12455789999999985 3467788888888889888
Q ss_pred hhhhcchhhHHHHHHhcCcCCceecccccc
Q 037878 379 SKDMKDGFYDRLEYELQGQRNTYYVGGLMA 408 (2280)
Q Consensus 379 ~~~~~~g~~~~l~~~lqg~~~~~~~G~~~~ 408 (2280)
+..-. .. ...-+.+++|.||.++.
T Consensus 379 ~~~~~-----~~-~~~~p~~gL~laG~~~~ 402 (425)
T 3ka7_A 379 AASGT-----DP-GNETPFSGLYVVGDGAK 402 (425)
T ss_dssp SCTTC-----CC-CSBCSSBTEEECSTTSC
T ss_pred cccCC-----CC-CCCCCcCCeEEeCCccC
Confidence 76432 12 12334468999998753
No 83
>1rsg_A FMS1 protein; FAD binding motif, oxidoreductase; HET: FAD; 1.90A {Saccharomyces cerevisiae} PDB: 1z6l_A* 3bi2_A* 3bi4_A* 3bi5_A* 3bnm_B* 3bnu_B* 3cn8_B* 3cnd_B* 3cnp_B* 3cns_A* 3cnt_B* 1yy5_A* 1xpq_A*
Probab=99.57 E-value=2.6e-14 Score=189.61 Aligned_cols=88 Identities=24% Similarity=0.319 Sum_probs=72.7
Q ss_pred EEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEc-CCccEEEEEeCCCceEEEEeCEEEEcCCccccc-----------
Q 037878 182 RRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRD-STTVGVDVKHSNGECEVMEFDKIIISGAFPVKN----------- 248 (2280)
Q Consensus 182 ~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~-~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~----------- 248 (2280)
....+ ++.++++|++.++ .+|++|++|++|+.+ +++ +.|++.+| ++++||+||+|+|+.+.+
T Consensus 196 ~~~~g-~~~l~~~l~~~l~~~~i~~~~~V~~I~~~~~~~--v~v~~~~g--~~~~ad~VI~t~p~~~l~~~~~~~~~~~~ 270 (516)
T 1rsg_A 196 AFALN-YDSVVQRIAQSFPQNWLKLSCEVKSITREPSKN--VTVNCEDG--TVYNADYVIITVPQSVLNLSVQPEKNLRG 270 (516)
T ss_dssp EEESC-HHHHHHHHHTTSCGGGEETTCCEEEEEECTTSC--EEEEETTS--CEEEEEEEEECCCHHHHHGGGSSCSCSTT
T ss_pred hhhhC-HHHHHHHHHHhCCCCEEEECCEEEEEEEcCCCe--EEEEECCC--cEEECCEEEECCCHHHhhhcccccccccc
Confidence 34566 9999999999885 579999999999986 444 47778888 478999999999999875
Q ss_pred ccccCCCCChhhHhhhccCCCChhhH
Q 037878 249 GKFYRSPTSKPTESETQVMDMDELEK 274 (2280)
Q Consensus 249 ~i~f~p~~~~~~~~~l~~~~l~~~~k 274 (2280)
.+.|.|++|+.+...+..+.++...|
T Consensus 271 ~i~f~P~Lp~~~~~ai~~~~~~~~~K 296 (516)
T 1rsg_A 271 RIEFQPPLKPVIQDAFDKIHFGALGK 296 (516)
T ss_dssp CCEEESCCCHHHHHHTTSSCCCCCEE
T ss_pred ceEecCCCCHHHHHHHHhCCCCcceE
Confidence 48999999999988887777765554
No 84
>4dsg_A UDP-galactopyranose mutase; rossmann fold, flavin adenine dinucleotide, isomerase; HET: FAD UDP; 2.25A {Trypanosoma cruzi} PDB: 4dsh_A*
Probab=99.57 E-value=8.4e-14 Score=182.16 Aligned_cols=206 Identities=18% Similarity=0.163 Sum_probs=128.0
Q ss_pred EEEEcCCHHHHHHHHHhHCCC-ceEeC--cceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCC
Q 037878 181 IRRFKGGYTSLWQKLSKYLPT-EVHCN--SEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTS 257 (2280)
Q Consensus 181 ~~~~~gG~~~l~~~la~~lg~-~I~l~--t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~ 257 (2280)
.|++.||++++++++++.++. +|++| ++|++|+++++++ . ..+| ++++||+||+|+|..
T Consensus 208 ~yp~~gG~~~l~~~la~~l~~~~i~~~~~~~V~~I~~~~~~v--~--~~~G--~~~~ad~VI~a~p~~------------ 269 (484)
T 4dsg_A 208 RFPQRGGTGIIYQAIKEKLPSEKLTFNSGFQAIAIDADAKTI--T--FSNG--EVVSYDYLISTVPFD------------ 269 (484)
T ss_dssp EEESSSCTHHHHHHHHHHSCGGGEEECGGGCEEEEETTTTEE--E--ETTS--CEEECSEEEECSCHH------------
T ss_pred EeecCCCHHHHHHHHHhhhhhCeEEECCCceeEEEEecCCEE--E--ECCC--CEEECCEEEECCCHH------------
Confidence 445679999999999999975 89999 5699999887744 3 3577 478999999996554
Q ss_pred hhhHhhhcc---CCCChhhHhhhccceeeeeEEEEEeecC--cccCCceeEEEecCCCCCCCCCCcce-eEEeecCCCcE
Q 037878 258 KPTESETQV---MDMDELEKELFSKVQTIDYYTTVLKITG--LEHLPVGFYYFGEYMDDPATIGHPVA-MQKFFADTDIF 331 (2280)
Q Consensus 258 ~~~~~~l~~---~~l~~~~k~~~~~~~~~~~~~~i~~~~~--l~~~p~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 331 (2280)
....+.. .++.+..+..+..+.+.......+..+. ...++.++.++.+..+.+......+. ......+.+.+
T Consensus 270 --~~~~ll~~~~~~~~~~~~~~l~~l~y~s~~~v~l~~~~~~~~~~~~~~~i~vp~~~~~~~ri~~~s~~~p~~ap~g~~ 347 (484)
T 4dsg_A 270 --NLLRMTKGTGFKGYDEWPAIADKMVYSSTNVIGIGVKGTPPPHLKTACWLYFPEDTSPFYRATVFSNYSKYNVPEGHW 347 (484)
T ss_dssp --HHHHHEECSSCTTGGGHHHHHHHCCEEEEEEEEEEEESCCCGGGTTCCEEECCSTTCSCSEEECGGGTCGGGSCTTEE
T ss_pred --HHHHHhhccCCCCCHHHHHHHhCCCcCceEEEEEEEcCCCcccCCCCeEEEEEcCCCeEEEEEeecCCCcccCCCCeE
Confidence 3333221 1234444555666666655444433322 11234567777666543211111111 11111233433
Q ss_pred EE---EecCCCCCCChHHHHHHHHHHHHhhcCc-cc----eEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCceec
Q 037878 332 LF---WSYGNSVDITGPTVTEVAIKTVENMGGV-IE----NVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTYYV 403 (2280)
Q Consensus 332 ~~---~~~g~~~~~s~~e~~~~i~~~L~~~~~~-p~----~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~ 403 (2280)
.+ ...+...+.+|+++.+.++++|.+++.. ++ ...+.++.+++|++++.+.+. ++++...++.. +++++
T Consensus 348 ~l~~e~~~~~~~~~~d~~l~~~a~~~L~~~~~~~~~~~~~~~~v~r~~~~yP~y~~~~~~~--~~~~~~~l~~~-~l~~~ 424 (484)
T 4dsg_A 348 SLMLEVSESKYKPVNHSTLIEDCIVGCLASNLLLPEDLLVSKWHYRIEKGYPTPFIGRNNL--LEKAQPELMSR-CIYSR 424 (484)
T ss_dssp EEEEEEEEBTTBCCCTTSHHHHHHHHHHHTTSCCTTCCEEEEEEEEEEEEEECCBTTHHHH--HHHHHHHHHHT-TEEEC
T ss_pred EEEEEEecCcCCcCCHHHHHHHHHHHHHHcCCCCccceEEEEEEEEeCccccCCCccHHHH--HHHHHHHHHhC-CcEee
Confidence 22 2223335679999999999999998632 22 235778899999999987653 66665556655 89999
Q ss_pred cccccc
Q 037878 404 GGLMAF 409 (2280)
Q Consensus 404 G~~~~~ 409 (2280)
|.+-.+
T Consensus 425 Gr~g~~ 430 (484)
T 4dsg_A 425 GRFGAW 430 (484)
T ss_dssp STTTTC
T ss_pred cCCccc
Confidence 975333
No 85
>3k7m_X 6-hydroxy-L-nicotine oxidase; enantiomeric substrates, flavoenzymes, nicotine degradation, oxidoreductase; HET: FAD GP7; 1.95A {Arthrobacter nicotinovorans} PDB: 3k7q_X* 3ng7_X* 3ngc_X* 3nh3_X* 3nho_X* 3nk0_X* 3nk1_X* 3nk2_X* 3nn0_X* 3nn6_X* 3k7t_A*
Probab=99.55 E-value=7.5e-14 Score=181.31 Aligned_cols=82 Identities=16% Similarity=0.259 Sum_probs=71.9
Q ss_pred EEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChhhHh
Q 037878 183 RFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPTES 262 (2280)
Q Consensus 183 ~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~ 262 (2280)
.+.+|+..+++++++.+| +|++|++|++|+.+++++ .|++.+| ++++||+||+|+|+++.+.+.|.|+++..+..
T Consensus 201 ~~~~g~~~l~~~~~~~~g-~i~~~~~V~~i~~~~~~v--~v~~~~g--~~~~ad~vi~a~~~~~l~~i~~~p~l~~~~~~ 275 (431)
T 3k7m_X 201 VFSNGSADLVDAMSQEIP-EIRLQTVVTGIDQSGDVV--NVTVKDG--HAFQAHSVIVATPMNTWRRIVFTPALPERRRS 275 (431)
T ss_dssp EETTCTHHHHHHHHTTCS-CEESSCCEEEEECSSSSE--EEEETTS--CCEEEEEEEECSCGGGGGGSEEESCCCHHHHH
T ss_pred hcCCcHHHHHHHHHhhCC-ceEeCCEEEEEEEcCCeE--EEEECCC--CEEEeCEEEEecCcchHhheeeCCCCCHHHHH
Confidence 789999999999999999 999999999999888765 5777788 46899999999999999999999999988887
Q ss_pred hhccCCC
Q 037878 263 ETQVMDM 269 (2280)
Q Consensus 263 ~l~~~~l 269 (2280)
.+....+
T Consensus 276 ~~~~~~~ 282 (431)
T 3k7m_X 276 VIEEGHG 282 (431)
T ss_dssp HHHHCCC
T ss_pred HHHhCCC
Confidence 7755443
No 86
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=99.55 E-value=7.6e-14 Score=158.33 Aligned_cols=101 Identities=23% Similarity=0.372 Sum_probs=85.1
Q ss_pred ceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1593 QVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1593 ~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
.+.||++|.|++++.| ..++||++|+||.+++|.+|++||++|+||++|+|+++..+|++++|.|+||
T Consensus 83 ~~~Ig~~~~Ig~~~~i------------~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~pa 150 (187)
T 3r3r_A 83 PLIIGEDVTVGHKVML------------HGCTIGNRVLVGMGSIVLDGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSPV 150 (187)
T ss_dssp CEEECSSCEECTTCEE------------ESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTTEEEETTTT
T ss_pred CeEECCCCEECCCCEE------------eCcEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcCcCCCcEEEecCC
Confidence 4788888889888888 5689999999999999999999999999999999996666999999999994
Q ss_pred ceeeecccchhhHHHHHhHHHHHHHHHhhhhhhh
Q 037878 1673 PVMIKNTMHALDDRIEEMDMKYKKIVGNLSANLA 1706 (2280)
Q Consensus 1673 ~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~~~ 1706 (2280)
+..++......+.++.....|.++.+++...+.
T Consensus 151 -~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 183 (187)
T 3r3r_A 151 -KQIRPLSDAERSGLQYSANNYVKWKDDYLSQDN 183 (187)
T ss_dssp -EEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -eEcCcCCHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 555665555566677777888888888776664
No 87
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=99.53 E-value=6.2e-14 Score=159.67 Aligned_cols=98 Identities=15% Similarity=0.193 Sum_probs=65.2
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
+.||+++.|++++.+ ..++||++|+||+++.|++|++||+||+||++|+|+++..+|+++++.|+|+.
T Consensus 86 ~~Ig~~~~i~~~~~i------------~~~~Ig~~~~Ig~~~~I~~gv~IG~~~~IgagsvV~~~~~Ip~~svv~G~pa~ 153 (194)
T 3tv0_A 86 MIIGTNNVFEVGCYS------------QAMKMGDNNVIESKAYVGRNVILTSGCIIGACCNLNTFEVIPENTVIYGADCL 153 (194)
T ss_dssp EEECSSCEECTTCEE------------CCSEECSSCEECTTCEECTTEEECSSCEECTTCEECCCEEECTTEEEESTTCC
T ss_pred eEECCcceEecceeE------------eeeeecccceecceeeECCeEEECCCCEECCCCEECCCcEECCCCEEECCCcE
Confidence 677888888888877 56799999999999999999999999999999999999889999999999975
Q ss_pred eeeecccch----hhHHHHHhHHHHHHHHHhhhh
Q 037878 1674 VMIKNTMHA----LDDRIEEMDMKYKKIVGNLSA 1703 (2280)
Q Consensus 1674 ~~~~~~~~~----~~~~le~~~p~~~~~v~~l~~ 1703 (2280)
.+....... ..+.+++.-|.|.++.+.+..
T Consensus 154 ~~~~~~~~~~~~~~~~~l~k~~p~y~~l~k~~k~ 187 (194)
T 3tv0_A 154 RRVQTERPQPQTLQLDFLMKILPNYHHLKKTMKG 187 (194)
T ss_dssp EEEECCCCCC------------------------
T ss_pred EeecccCcccchHHHHHHHHHhHHHHHHHHHhhc
Confidence 443222111 112334445566655555543
No 88
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=99.52 E-value=6.6e-14 Score=159.23 Aligned_cols=100 Identities=17% Similarity=0.300 Sum_probs=85.3
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+.+.||++|.|+++|.| ..++||++|+||++++|.+|++||++|+||++|+|+++..+|+++++.|+|
T Consensus 86 ~~~~Ig~~~~Ig~~~~i------------~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~Ig~~s~V~~g~~i~~~~vv~G~p 153 (189)
T 3r1w_A 86 YPLIIGDDVTIGHQAML------------HGCTIGNRVLIGMKSMIMDGAIVEDEVIVAAGATVSPGKVLESGFVYMGTP 153 (189)
T ss_dssp BCEEECSSEEECTTCEE------------ESCEECSSEEECTTCEECTTCEECSSCEECTTCEECTTCEECTTEEEETTT
T ss_pred CCeEECCCCEECCCCEE------------eCcEECCCcEECCCCEEcCCCEECCCCEEccCCEECCCCEeCCCCEEECCc
Confidence 45888999999999988 457999999999999999999999999999999999766699999999999
Q ss_pred CceeeecccchhhHHHHHhHHHHHHHHHhhhhh
Q 037878 1672 SPVMIKNTMHALDDRIEEMDMKYKKIVGNLSAN 1704 (2280)
Q Consensus 1672 a~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~ 1704 (2280)
++.+++......+.++...+.|.++.+++..+
T Consensus 154 -a~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (189)
T 3r1w_A 154 -AKKVRPITEKERSFFTYGAGNYVRLKDKHLAE 185 (189)
T ss_dssp -TEEEEECCHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred -cccccCCCHHHHHHHHHHHHHHHHHHHHHhhc
Confidence 55556666666677777788888888877643
No 89
>2xag_A Lysine-specific histone demethylase 1; amine oxidase, chromatin regulator, histone inhibitor binding, methylation, nucleosome core, oxidoreductase; HET: FAD TCF; 3.10A {Homo sapiens} PDB: 2xaf_A* 2xah_A* 2xaj_A* 2xaq_A* 2xas_A* 2com_A
Probab=99.52 E-value=6.6e-14 Score=191.21 Aligned_cols=177 Identities=15% Similarity=0.171 Sum_probs=112.5
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEe-C-CCceEEEEeCEEEEcCCcccccc----cc
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKH-S-NGECEVMEFDKIIISGAFPVKNG----KF 251 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t-~-~G~~~~i~aD~VI~A~p~~v~~~----i~ 251 (2280)
.+.++.++||++.|+++|++.+ +|++|++|++|+.+++++.|+..+ . ++..++++||+||+|+|+++++. +.
T Consensus 561 ~g~~~~~~gG~~~L~~aLa~~l--~I~Lnt~V~~I~~~~~gV~V~~~~~~~~~~g~~i~AD~VIvTvPl~vLk~l~~~I~ 638 (852)
T 2xag_A 561 TGSHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQ 638 (852)
T ss_dssp BSCCEEETTCTTHHHHHHTTTC--CEECSEEEEEEEEETTEEEEEEEESSSTTCEEEEEESEEEECCCHHHHHCSSCSSE
T ss_pred CCceEEecCcHHHHHHHHHhCC--CEEeCCeEEEEEEcCCcEEEEEeecccCCCCeEEECCEEEECCCHHHHHhhhcccc
Confidence 3567899999999999999876 799999999999998877555443 1 12126799999999999999765 78
Q ss_pred cCCCCChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEEecCCCCCCCCCCcceeEEeecCCCcE
Q 037878 252 YRSPTSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFFADTDIF 331 (2280)
Q Consensus 252 f~p~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (2280)
|.|++|..+...+..+.++...|..+ .|... -++.....+++..+..+.....+..+. .. ..+..
T Consensus 639 F~P~LP~~k~~AI~~l~~g~v~KV~L-~F~~~----------fW~~~~~~fG~l~~~~~~~~~l~~~~~---~~-~~pvL 703 (852)
T 2xag_A 639 FVPPLPEWKTSAVQRMGFGNLNKVVL-CFDRV----------FWDPSVNLFGHVGSTTASRGELFLFWN---LY-KAPIL 703 (852)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEE-ECSSC----------CSCTTCCEEEECCSSSTTTTTTCEEEE---CS-SSSEE
T ss_pred cCCCCCHHHHHHHHcCCccceEEEEE-EcCCc----------ccCCCCCeeeeeccccCCCCceEEEec---CC-CCCEE
Confidence 99999998887776665554444222 11111 111112334544443332222221111 11 22333
Q ss_pred EEEecCCC----CCCChHHHHHHHHHHHHhhcC-----ccceEEEeecC
Q 037878 332 LFWSYGNS----VDITGPTVTEVAIKTVENMGG-----VIENVVLQRRF 371 (2280)
Q Consensus 332 ~~~~~g~~----~~~s~~e~~~~i~~~L~~~~~-----~p~~~~~~~~~ 371 (2280)
..++.|.. ..++++++++.+++.|+++.+ .|....+.+|.
T Consensus 704 l~~v~G~~a~~l~~lsdeel~~~~l~~L~~ifG~~~~~~P~~~~vtrW~ 752 (852)
T 2xag_A 704 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWR 752 (852)
T ss_dssp EEEECHHHHHHGGGSCHHHHHHHHHHHHHHHHCTTTCCCCSEEEECCTT
T ss_pred EEEecCcCHHHHhcCCHHHHHHHHHHHHHHHhCccccCCceEEEEEecC
Confidence 33333322 457999999999999999742 25566666665
No 90
>2jae_A L-amino acid oxidase; oxidoreductase, dimerisation mode, hydride transfer mechanism, GR2-family, flavoenzyme, FAD containing; HET: FAD; 1.25A {Rhodococcus opacus} PDB: 2jb1_A* 2jb2_A* 2jb3_A*
Probab=99.51 E-value=4.2e-13 Score=177.16 Aligned_cols=73 Identities=15% Similarity=0.114 Sum_probs=59.2
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCC-CceEeCcceEEEEEcCCccEEEEEeCCC-ceEEEEeCEEEEcCCccccccccc
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLP-TEVHCNSEVLAIRRDSTTVGVDVKHSNG-ECEVMEFDKIIISGAFPVKNGKFY 252 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg-~~I~l~t~V~~I~~~~~~v~V~v~t~~G-~~~~i~aD~VI~A~p~~v~~~i~f 252 (2280)
...+++++||++.|+++|++.++ .+|++|++|++|+++++++. |++.+| +.++++||+||+|+|+.+...+.+
T Consensus 228 ~~~~~~~~gG~~~l~~~l~~~l~~~~i~~~~~V~~i~~~~~~v~--v~~~~g~~~~~~~ad~vI~a~p~~~l~~l~~ 302 (489)
T 2jae_A 228 AMMMFTPVGGMDRIYYAFQDRIGTDNIVFGAEVTSMKNVSEGVT--VEYTAGGSKKSITADYAICTIPPHLVGRLQN 302 (489)
T ss_dssp SSSEEEETTCTTHHHHHHHHHHCGGGEETTCEEEEEEEETTEEE--EEEEETTEEEEEEESEEEECSCHHHHTTSEE
T ss_pred CccEEeecCCHHHHHHHHHHhcCCCeEEECCEEEEEEEcCCeEE--EEEecCCeEEEEECCEEEECCCHHHHHhCcc
Confidence 35688999999999999999998 88999999999999888764 444343 224789999999988776665554
No 91
>3qj4_A Renalase; FAD/NAD(P)-binding rossmann fold superfamily, flavin contain oxidoreductase, monoamine oxidase, NAD, extracellular, oxidoreductase; HET: FAD; 2.50A {Homo sapiens}
Probab=99.51 E-value=1.4e-13 Score=172.78 Aligned_cols=300 Identities=14% Similarity=0.060 Sum_probs=169.1
Q ss_pred CeEEEECccHHHHHHHHHHHh---CCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecCCCCceeeccccc
Q 037878 22 TRIGIVGGGPSGLSTAYALAK---LGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQDIKVAD 98 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~---~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (2280)
+||+|||||++||+||+.|++ +|+ +|+||||++.+||++.+.+.+..... ..+.....+... .
T Consensus 2 ~dV~IIGaG~aGl~~A~~L~~~~~~G~-~V~v~Ek~~~~gg~~~~~~~~~~~~~----------~~d~g~~~~~~~---~ 67 (342)
T 3qj4_A 2 AQVLIVGAGMTGSLCAALLRRQTSGPL-YLAVWDKADDSGGRMTTACSPHNPQC----------TADLGAQYITCT---P 67 (342)
T ss_dssp EEEEEECCSHHHHHHHHHHHSCC-CCE-EEEEECSSSSSCGGGCEEECSSCTTC----------EEESSCCCEEEC---S
T ss_pred CcEEEECCcHHHHHHHHHHHhhccCCc-eEEEEECCCCCccceeeeecCCCCCc----------eEecCCceEEcC---c
Confidence 589999999999999999999 998 79999999999999887654221000 000000000000 0
Q ss_pred chhhhhccccccchhhhhccccchhhHHHhhhhhhhHHHHHcCCC-CcchhhhhhhhcccccccccccHHHHHHHHhhcc
Q 037878 99 DYVSVISLTLELQDKAKESGRIGVHAVSDLASDLTPTYLEDRGFK-SVPKSVAYGYTASGYGFVQDMPYAYIHEFTRTSM 177 (2280)
Q Consensus 99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 177 (2280)
.+ ...+ ......+.. .+.. .... ..... ....
T Consensus 68 ~~------------------------~~~~-~~~~~~~~~-~g~~~~~~~------------~~~~~---------~~~~ 100 (342)
T 3qj4_A 68 HY------------------------AKKH-QRFYDELLA-YGVLRPLSS------------PIEGM---------VMKE 100 (342)
T ss_dssp SH------------------------HHHT-HHHHHHHHH-TTSCEECCS------------CEETC---------CC--
T ss_pred hH------------------------HHHH-HHHHHHHHh-CCCeecCch------------hhcce---------eccC
Confidence 00 0000 000011111 1110 0000 00000 0011
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCccccccccc--CCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFY--RSP 255 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f--~p~ 255 (2280)
....+...+|+..+.+++++.+|.+|++|++|++|++++++| .+++.+| ++++||+||+|+|.+....+.. .|+
T Consensus 101 ~~~~~~~~~g~~~l~~~l~~~~g~~i~~~~~V~~i~~~~~~~--~v~~~~g--~~~~ad~vV~A~p~~~~~~ll~~~~~~ 176 (342)
T 3qj4_A 101 GDCNFVAPQGISSIIKHYLKESGAEVYFRHRVTQINLRDDKW--EVSKQTG--SPEQFDLIVLTMPVPEILQLQGDITTL 176 (342)
T ss_dssp CCEEEECTTCTTHHHHHHHHHHTCEEESSCCEEEEEECSSSE--EEEESSS--CCEEESEEEECSCHHHHTTCBSTHHHH
T ss_pred CccceecCCCHHHHHHHHHHhcCCEEEeCCEEEEEEEcCCEE--EEEECCC--CEEEcCEEEECCCHHHHHHHhcccccc
Confidence 234677899999999999998899999999999999988876 5667777 3579999999976553322211 011
Q ss_pred CChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecC-ccc-CCceeEEEecCCCCCCCCCCcce-eEEee-c-C-CC
Q 037878 256 TSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITG-LEH-LPVGFYYFGEYMDDPATIGHPVA-MQKFF-A-D-TD 329 (2280)
Q Consensus 256 ~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~-l~~-~p~~~~~~~~~~~~~~~~~~~~~-~~~~~-~-~-~~ 329 (2280)
+.+.....+..+.+.......+..+. +.. .| ..+++.+... .+..... ..+.. . . .+
T Consensus 177 -------------l~~~~~~~l~~~~~~~~~~v~l~~~~~~~~~~~-~~g~~~~~~~---~~~~~~~~~~k~~r~~~~~~ 239 (342)
T 3qj4_A 177 -------------ISECQRQQLEAVSYSSRYALGLFYEAGTKIDVP-WAGQYITSNP---CIRFVSIDNKKRNIESSEIG 239 (342)
T ss_dssp -------------SCHHHHHHHHTCCBCCEEEEEEECSSCC--CCS-CSEEECSSCS---SEEEEEEHHHHTTCCCC-CC
T ss_pred -------------cCHHHHHHHhcCCccccEEEEEEECCCCccCCc-eeeEEccCCc---ceEEEEccccCCCCCCCCCC
Confidence 22233455666777766665655442 111 12 1233332111 0100000 00100 0 0 11
Q ss_pred -cEEEEecC----CCCCCChHHHHHHHHHHHHhhc---CccceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCce
Q 037878 330 -IFLFWSYG----NSVDITGPTVTEVAIKTVENMG---GVIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTY 401 (2280)
Q Consensus 330 -~~~~~~~g----~~~~~s~~e~~~~i~~~L~~~~---~~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~ 401 (2280)
.+.....+ ...+.+++++.+.++++|+++. ..|....+.||.+.+|++...+- ...+ .+....+++
T Consensus 240 ~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~g~~~~p~~~~v~rW~~a~p~~~~~~~----~~~~--~~~~~~~l~ 313 (342)
T 3qj4_A 240 PSLVIHTTVPFGVTYLEHSIEDVQELVFQQLENILPGLPQPIATKCQKWRHSQVTNAAANC----PGQM--TLHHKPFLA 313 (342)
T ss_dssp CEEEEEECHHHHHHTTTSCHHHHHHHHHHHHHHHSCSCCCCSEEEEEEETTCSBSSCCSSS----CSCE--EEETTTEEE
T ss_pred ceEEEECCHHHHHHhhcCCHHHHHHHHHHHHHHhccCCCCCceeeeccccccccccccCCC----ccee--EecCCccEE
Confidence 22222111 1256889999999999999984 34888999999999998866221 1111 124557899
Q ss_pred eccccccc
Q 037878 402 YVGGLMAF 409 (2280)
Q Consensus 402 ~~G~~~~~ 409 (2280)
+||.++.-
T Consensus 314 laGd~~~g 321 (342)
T 3qj4_A 314 CGGDGFTQ 321 (342)
T ss_dssp ECSGGGSC
T ss_pred EEccccCC
Confidence 99998753
No 92
>2z3y_A Lysine-specific histone demethylase 1; chromatin, nucleosome, transcription, LSD1, alternative splicing, chromatin regulator, coiled coil; HET: F2N; 2.25A {Homo sapiens} SCOP: a.4.1.18 c.3.1.2 d.16.1.5 PDB: 2ejr_A* 2z5u_A* 3abt_A* 3abu_A* 2y48_A* 2v1d_A* 2h94_A* 2iw5_A* 2uxn_A* 2uxx_A* 2hko_A* 2dw4_A* 2x0l_A* 2l3d_A
Probab=99.50 E-value=6.2e-14 Score=190.29 Aligned_cols=177 Identities=15% Similarity=0.176 Sum_probs=111.1
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeC--CCceEEEEeCEEEEcCCcccccc----cc
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHS--NGECEVMEFDKIIISGAFPVKNG----KF 251 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~--~G~~~~i~aD~VI~A~p~~v~~~----i~ 251 (2280)
.+.++.++||++.|+++|++.+ +|++|++|++|+.+++++.|+..+. ++..++++||+||+|+|+++++. +.
T Consensus 390 ~g~~~~~~gG~~~l~~~La~~l--~I~l~~~V~~I~~~~~~v~V~~~~~~~~~~~~~~~Ad~VI~tvP~~vL~~l~~~i~ 467 (662)
T 2z3y_A 390 TGSHLTVRNGYSCVPVALAEGL--DIKLNTAVRQVRYTASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQ 467 (662)
T ss_dssp BSCCEEETTCTTHHHHHHTTTC--EEETTEEEEEEEEETTEEEEEEEESSCTTCEEEEEESEEEECCCHHHHHCSSCSSE
T ss_pred CCceeeecCcHHHHHHHHHhcC--ceecCCeEEEEEECCCcEEEEEeecccCCCCeEEEeCEEEECCCHHHHhcccCceE
Confidence 3567899999999999999865 8999999999999988775554431 12225799999999999999765 78
Q ss_pred cCCCCChhhHhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEEecCCCCCCCCCCcceeEEeecCCCcE
Q 037878 252 YRSPTSKPTESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQKFFADTDIF 331 (2280)
Q Consensus 252 f~p~~~~~~~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 331 (2280)
|.|++|+.+...+..+.++...|..+ .|+... ++.....+++..+..++..... ..... ...+..
T Consensus 468 f~P~LP~~k~~Ai~~l~~g~~~KV~l-~f~~~f----------W~~~~~~~G~l~~~~~~~~~~~---~~~~~-~~~~vL 532 (662)
T 2z3y_A 468 FVPPLPEWKTSAVQRMGFGNLNKVVL-CFDRVF----------WDPSVNLFGHVGSTTASRGELF---LFWNL-YKAPIL 532 (662)
T ss_dssp EESCCCHHHHHHHHHSEECCCEEEEE-ECSSCC----------SCTTCSEEEECCSSSTTTTEEE---EEECC-SSSSEE
T ss_pred EcCCCCHHHHHHHHhCCccceeEEEE-EcCccc----------ccCCCCceeeecCCCCCCCcee---EEEeC-CCCCEE
Confidence 99999998888876666555444222 111111 1111123444333222111100 00000 122333
Q ss_pred EEEecCCC----CCCChHHHHHHHHHHHHhhcC-----ccceEEEeecC
Q 037878 332 LFWSYGNS----VDITGPTVTEVAIKTVENMGG-----VIENVVLQRRF 371 (2280)
Q Consensus 332 ~~~~~g~~----~~~s~~e~~~~i~~~L~~~~~-----~p~~~~~~~~~ 371 (2280)
..++.|.. ..++++++++.+++.|+++.+ .|....+.+|.
T Consensus 533 ~~~~~G~~a~~~~~lsdee~~~~~l~~L~~~~g~~~~~~p~~~~v~~W~ 581 (662)
T 2z3y_A 533 LALVAGEAAGIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWR 581 (662)
T ss_dssp EEEECTHHHHHHTTSCHHHHHHHHHHHHHHHHCTTSSCCCSEEEECCTT
T ss_pred EEEeccHhHHHHHhCCHHHHHHHHHHHHHHHhCCcccCCCceeEEEEEC
Confidence 33333332 468999999999999999832 25556666664
No 93
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=99.50 E-value=1.2e-13 Score=156.85 Aligned_cols=95 Identities=15% Similarity=0.262 Sum_probs=78.5
Q ss_pred ceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1593 QVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1593 ~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
.+.||++|.|++++.| ..++||++|+||.+++|.+|++||++|+||++|+|.++..+|+++++.|+|
T Consensus 95 ~~~Ig~~~~Ig~~~~i------------~~~~Ig~~~~Ig~~~~I~~~~~Ig~~~~Ig~gsvV~~~~~i~~~~~v~G~p- 161 (191)
T 3ixc_A 95 DTVIGKFVTIGHSCIL------------HACTLGNNAFVGMGSIVMDRAVMEEGSMLAAGSLLTRGKIVKSGELWAGRP- 161 (191)
T ss_dssp CEEECTTCEECTTCEE------------CSCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEEEETT-
T ss_pred CeEECCCCEECCCCEE------------ECCEECCCCEECCCCEEeCCeEECCCCEECCCCEECCCcCcCCCeEEECcC-
Confidence 4778888888888877 457999999999999999999999999999999999666699999999999
Q ss_pred ceeeecccchhhHHHHHhHHHHHHHHHh
Q 037878 1673 PVMIKNTMHALDDRIEEMDMKYKKIVGN 1700 (2280)
Q Consensus 1673 ~~~~~~~~~~~~~~le~~~p~~~~~v~~ 1700 (2280)
++.+|+........++.....|.++.+.
T Consensus 162 a~~i~~~~~~~~~~~~~~~~~~~~l~~~ 189 (191)
T 3ixc_A 162 AKFLRMMTEEEILYLQKSAENYIALSRG 189 (191)
T ss_dssp EEEEEECCHHHHHHHHHHHHHHHHHHHT
T ss_pred ceecccCCHHHHHHHHHHHHHHHHHHHh
Confidence 5566666655556666666666666554
No 94
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=99.49 E-value=2.2e-13 Score=152.14 Aligned_cols=98 Identities=14% Similarity=0.245 Sum_probs=82.3
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+.+.||++|.|++++.| ..++||++|+||.+++|.+|++||++++||++|+|+++..+|+++++.|+|
T Consensus 72 ~~~~Ig~~~~Ig~~~~i------------~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~p 139 (173)
T 1xhd_A 72 YPLILEDDVTVGHQVIL------------HSCHIKKDALIGMGSIILDGAEIGEGAFIGAGSLVSQGKKIPPNTLAFGRP 139 (173)
T ss_dssp CCEEECTTCEECTTCEE------------ESCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTEEEEETT
T ss_pred CCeEECCCCEECCCCEE------------eCCEECCCCEEcCCCEEcCCCEECCCCEECCCCEECCCcEeCCCCEEECCC
Confidence 45888999999999888 457999999999999999999999999999999999766699999999999
Q ss_pred CceeeecccchhhHHHHHhHHHHHHHHHhhh
Q 037878 1672 SPVMIKNTMHALDDRIEEMDMKYKKIVGNLS 1702 (2280)
Q Consensus 1672 a~~~~~~~~~~~~~~le~~~p~~~~~v~~l~ 1702 (2280)
++..++......+.+++....|.++.+.+.
T Consensus 140 -a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 169 (173)
T 1xhd_A 140 -AKVIRELTAEDRKDMERIRTQYVEKGQYYK 169 (173)
T ss_dssp -EEEEEECCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CEECCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 455566666566667777777777776653
No 95
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=99.48 E-value=8.5e-14 Score=160.33 Aligned_cols=55 Identities=31% Similarity=0.529 Sum_probs=51.4
Q ss_pred EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCcee
Q 037878 1619 IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVM 1675 (2280)
Q Consensus 1619 ~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~ 1675 (2280)
..++++||++|+||++++|++|++||++|+||++|+|+++ +|+++++.|+||..+
T Consensus 131 ~~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~--v~~~~v~~G~Pa~~i 185 (205)
T 3vbi_A 131 KTGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKES--LDDWYIYVGVPVRKI 185 (205)
T ss_dssp EECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECSC--BCTTEEEETTTTEEE
T ss_pred ccCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECCc--cCCCeEEEccCCEEe
Confidence 4688999999999999999999999999999999999999 999999999995444
No 96
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=99.48 E-value=3.6e-13 Score=177.17 Aligned_cols=173 Identities=15% Similarity=0.252 Sum_probs=136.4
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCce----eecCEEECCCcEECCCCEECCCCEECCCCEE
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVL----SFQPIKIARKVSVGPYAVIQKGSVIGEEAEV 1392 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~----~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~i 1392 (2280)
.++||++|.|+.... ..+.+.||++|.|++++.+....+.++.. .+....||+++.||.++.+.||++|++++.|
T Consensus 283 dv~IG~dv~I~~~v~-i~g~~~Ig~~~~I~~~~~i~~~~i~~~~~i~~~~i~~~~ig~~~~ig~~~~i~~~~~i~~~v~I 361 (501)
T 3st8_A 283 DVTIGRDTVIHPGTQ-LLGRTQIGGRCVVGPDTTLTDVAVGDGASVVRTHGSSSSIGDGAAVGPFTYLRPGTALGADGKL 361 (501)
T ss_dssp TCEECTTCEECSSEE-EETTCEECTTCEECSSCEEEEEEECTTCEECSEEEEEEEECTTCEECSSEEECTTCEECTTCEE
T ss_pred ceEECCcceecceee-ecCccccccceEEeeceeecCceEecCCEEEeecccccccccccccCCceeecCCcEEcccccc
Confidence 578999999976544 34678899999999999998887766544 3445678999999999999999999999999
Q ss_pred CcCCccCCCCccccCCCceeeccCCCccccccccchhHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCCCCchhhHHH
Q 037878 1393 APLQKSEGGKPILKSTNANYVQKGGAVSKISTHRTQDEAIHQFIGIYIVSFLSTLSAAITYFLYIWLSQKPASPRHFAFL 1472 (2280)
Q Consensus 1393 g~~s~v~~~~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 1472 (2280)
|+.+.+..
T Consensus 362 G~~v~ik~------------------------------------------------------------------------ 369 (501)
T 3st8_A 362 GAFVEVKN------------------------------------------------------------------------ 369 (501)
T ss_dssp EETEEEES------------------------------------------------------------------------
T ss_pred CCeEEEcc------------------------------------------------------------------------
Confidence 98664321
Q ss_pred HhhccccchhHHHhhhhhhccccCCchhHHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccccchhhHHHHHHHHHhhh
Q 037878 1473 CISGAFHWLPFTIIAYATMFASVPANPAYFAISTAVAYLFHGLVLSYLTCILTHFLAGKKEEKQTHLKAWLCHRITIACH 1552 (2280)
Q Consensus 1473 ~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~w~~~~~~~~~~ 1552 (2280)
T Consensus 370 -------------------------------------------------------------------------------- 369 (501)
T 3st8_A 370 -------------------------------------------------------------------------------- 369 (501)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred --------------------------------------------------------------------------------
Confidence
Q ss_pred hhhhhhccCCchHHHHHHHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEc
Q 037878 1553 LRFAKLLSGTEAFCIYLRLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIG 1632 (2280)
Q Consensus 1553 ~~~~~~l~gt~~~~~~lR~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG 1632 (2280)
+.||+++.|+..+.+.+ +.||++|.||.+|.+.+.. +....+++|||+|+||
T Consensus 370 ---------------------s~Ig~gskI~~~~~i~d---~~Ig~~v~IG~g~i~~n~d----g~~~~~t~IGd~~~iG 421 (501)
T 3st8_A 370 ---------------------STIGTGTKVPHLTYVGD---ADIGEYSNIGASSVFVNYD----GTSKRRTTVGSHVRTG 421 (501)
T ss_dssp ---------------------CEECTTCEEEESCEEES---EEECSSCEECTTCEEECBC----SSSBCCEEECTTCEEC
T ss_pred ---------------------ceecCCcEEeccceecC---ceEcCCCEECCCEEEEccc----CCcccCCEECCCcEEC
Confidence 23555555544332322 7899999999999885432 2233568999999999
Q ss_pred cCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEe-cCCC
Q 037878 1633 SQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYI-GSQS 1672 (2280)
Q Consensus 1633 ~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~-G~Pa 1672 (2280)
.++.+.+|++||+||+||+||+|++| ||+|++.+ |+|+
T Consensus 422 ~~~~l~~~v~Ig~~~~i~ags~v~~d--vp~~~l~~~~~~~ 460 (501)
T 3st8_A 422 SDTMFVAPVTIGDGAYTGAGTVVRED--VPPGALAVSAGPQ 460 (501)
T ss_dssp TTCEEESSEEECTTCEECTTCEECSC--BCTTCEECCCCCC
T ss_pred CCCEEcCCcEECCCCEECCCCEECcc--cCCCCeEEeccCc
Confidence 99999999999999999999999999 99999755 5785
No 97
>3pmo_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltr; lipid A biosynthesis pathway, transferase; 1.30A {Pseudomonas aeruginosa}
Probab=99.47 E-value=1e-12 Score=163.93 Aligned_cols=54 Identities=13% Similarity=0.097 Sum_probs=49.9
Q ss_pred EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1619 IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1619 ~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
..+.++||++|+|++++.|..+++||++|+||+++.|.++-.|++++++.|.+.
T Consensus 259 I~~~v~IG~~~~I~~~~~I~~~v~IG~~~~Ig~~a~V~~~v~Ig~~~vI~a~s~ 312 (372)
T 3pmo_A 259 IAHNVQIGDHTAMAACVGISGSAKIGRHCMLAGGVGLVGHIEICDNVFVTGMTM 312 (372)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECSSCEECSSEEECTTCE
T ss_pred ECCCCEECCCCEECCCCEECCCCEECCCeEEeCCCEECCCCEECCCCEEeeCCE
Confidence 346789999999999999999999999999999999999888999999999874
No 98
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.46 E-value=3.2e-13 Score=150.74 Aligned_cols=100 Identities=16% Similarity=0.251 Sum_probs=84.0
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+.+.||++|.|++++.| ..++||++|+||.++.|.+|++||++++||++|+|+++..+|+++++.|+|
T Consensus 70 ~~~~Ig~~~~I~~~~~i------------~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Ig~~s~V~~~~~i~~~~~v~G~p 137 (173)
T 1v3w_A 70 YPTEIGEYVTIGHNAMV------------HGAKVGNYVIIGISSVILDGAKIGDHVIIGAGAVVPPNKEIPDYSLVLGVP 137 (173)
T ss_dssp BCEEECSSCEECTTCEE------------ESCEECSSEEECTTCEECTTCEECSSEEECTTCEECTTCEECTTEEEEETT
T ss_pred CCeEECCCCEECCCCEE------------CCCEECCCCEECCCCEEeCCCEECCCCEECCCCEECCCcEeCCCcEEECcC
Confidence 35889999999999888 458999999999999999999999999999999999766699999999999
Q ss_pred CceeeecccchhhHHHHHhHHHHHHHHHhhhhh
Q 037878 1672 SPVMIKNTMHALDDRIEEMDMKYKKIVGNLSAN 1704 (2280)
Q Consensus 1672 a~~~~~~~~~~~~~~le~~~p~~~~~v~~l~~~ 1704 (2280)
.+..+.......+.+++..+.|.++.+++...
T Consensus 138 -a~~~~~~~~~~~~~~~~~~~~y~~~~~~~~~~ 169 (173)
T 1v3w_A 138 -GKVVRQLTEEEIEWTKKNAEIYVELAEKHIKG 169 (173)
T ss_dssp -EEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CEEeccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55556666555666767777888877776543
No 99
>2cq8_A 10-formyltetrahydrofolate dehydrogenase; 10-FTHFDH, PP-binding, acyl carrier protein, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.46 E-value=6.9e-14 Score=138.49 Aligned_cols=77 Identities=13% Similarity=0.236 Sum_probs=70.8
Q ss_pred CCChhHHHHHHHHHHHHHhC-CCCccccCCCChhhcccchHHHHHHHHHHHHHhC-CccCcccccCcccHHHHHHHHHhh
Q 037878 1076 KMSNKDIVEFLKGLVSEQTG-IPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLG-VPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1076 ~~~~~~~e~~l~~iw~~vLg-~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g-~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
..+.+++|++|+++|+++|+ .+ .|+.+||||++|||||+|++|+.+|++.++ +++++.+||++||+++||+.+...
T Consensus 20 t~~~~~~E~~La~iW~~vL~~~~--~i~~~ddFF~lGG~SLla~rLv~~ir~~~g~v~l~l~~Lf~~pTl~~lA~~l~~~ 97 (110)
T 2cq8_A 20 TEAELVTAEAVRSVWQRILPKVL--EVEDSTDFFKSGAASVDVVRLVEEVKELCDGLELENEDVYMASTFGDFIQLLVRK 97 (110)
T ss_dssp CTTHHHHHHHHHHHHHHHCSSCS--CCCTTCBHHHHHCCTTHHHHHHHHHHHHHTSCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred cCcchHHHHHHHHHHHHHhCCCC--CCCCCCCHHhcCChHHHHHHHHHHHHHHcCCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 34567899999999999999 65 799999999999999999999999999999 999999999999999999999754
Q ss_pred h
Q 037878 1154 V 1154 (2280)
Q Consensus 1154 ~ 1154 (2280)
.
T Consensus 98 ~ 98 (110)
T 2cq8_A 98 L 98 (110)
T ss_dssp H
T ss_pred h
Confidence 3
No 100
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.44 E-value=2.7e-13 Score=153.35 Aligned_cols=104 Identities=16% Similarity=0.177 Sum_probs=87.3
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccC-------CCceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYS-------SIGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~-------~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||++++|+.++.+.....++||++|+|+++|.|.++.+. .+....++++||++||||.+++|++|++||+
T Consensus 75 ~i~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~IG~ 154 (203)
T 1krr_A 75 NIHIGRNFYANFNLTIVDDYTVTIGDNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVTIGD 154 (203)
T ss_dssp TEEECSSCEECSCEEEECSSCEEECSSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCEECT
T ss_pred CeEECCeeEECCccEEecccceEECCCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeEECC
Confidence 578999999988766666678999999999999999654321 1223567899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
||+||++|+|+++ +|+++++.|+||. .+|+.
T Consensus 155 ~~vIgagsvV~~d--vp~~~vv~G~PAr-vik~~ 185 (203)
T 1krr_A 155 NSVIGAGSIVTKD--IPPNVVAAGVPCR-VIREI 185 (203)
T ss_dssp TCEECTTCEECSC--BCTTEEEETTTTE-EEEEC
T ss_pred CCEECCCCEECCC--cCCCcEEEccCcE-EeccC
Confidence 9999999999999 9999999999954 44443
No 101
>3r0s_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; structural genomics; 2.30A {Campylobacter jejuni subsp} SCOP: b.81.1.0
Probab=99.44 E-value=1.2e-12 Score=156.61 Aligned_cols=87 Identities=13% Similarity=0.264 Sum_probs=73.2
Q ss_pred eeCCCceeccCCcccC-----CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1575 KIGRYCSIRAINPVSC-----PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~-----~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.||++|.|+..+.+.. ...+.||++|.|+.++.|. ..++||++|+||+++.+.++++||++++|
T Consensus 85 ~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~-----------~~~~IG~~~~i~~~~~i~~~v~Igd~~~I 153 (266)
T 3r0s_A 85 VIGKNATIREFATINSGTAKGDGFTRIGDNAFIMAYCHIA-----------HDCLLGNNIILANNATLAGHVELGDFTVV 153 (266)
T ss_dssp EECTTCEECTTCEEECCCTTTTSEEEECTTCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECTTCEE
T ss_pred EECCCCEECCceEecCCcccCCccEEECCCceeCCcceEc-----------cccccCCCeEECCCceecCCeEECCCcEE
Confidence 4666666655544332 2459999999999999985 66899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCCC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
|++|+|.++-.|++++.+.|.+.
T Consensus 154 g~~a~V~~~v~Ig~~a~Vg~~s~ 176 (266)
T 3r0s_A 154 GGLTPIHQFVKVGEGCMIAGASA 176 (266)
T ss_dssp CTTCEECTTCEECTTCEECSSCB
T ss_pred ccCCEECCCcEECCCCEEccCCe
Confidence 99999999977799999988874
No 102
>4gut_A Lysine-specific histone demethylase 1B; histone demethylase; HET: FAD PGE; 2.00A {Homo sapiens} PDB: 4gur_A* 4gus_A* 4guu_A* 4fwe_A* 4fwf_A* 4fwj_A* 4gu1_A*
Probab=99.44 E-value=1.6e-13 Score=186.78 Aligned_cols=87 Identities=18% Similarity=0.316 Sum_probs=71.8
Q ss_pred CCeEEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCccccc--ccccCCC
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKN--GKFYRSP 255 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~--~i~f~p~ 255 (2280)
.+....+.+|++.+.+++++.+ +|++|++|++|+.+++++ .|++.+| ++++||+||+|+|+++++ .+.|.|+
T Consensus 523 ~G~~~~~~~G~~~l~~aLa~gl--~I~l~t~V~~I~~~~~~v--~V~~~~G--~~i~Ad~VIvA~P~~vL~~~~i~f~P~ 596 (776)
T 4gut_A 523 AGDHTLLTPGYSVIIEKLAEGL--DIQLKSPVQCIDYSGDEV--QVTTTDG--TGYSAQKVLVTVPLALLQKGAIQFNPP 596 (776)
T ss_dssp CSCEEECTTCTHHHHHHHHTTS--CEESSCCEEEEECSSSSE--EEEETTC--CEEEESEEEECCCHHHHHTTCSEEESC
T ss_pred CCCeEEECChHHHHHHHHHhCC--cEEcCCeeEEEEEcCCEE--EEEECCC--cEEEcCEEEECCCHHHHhhcccccCCC
Confidence 4556778999999999999755 899999999999988865 6777788 479999999999999874 5789999
Q ss_pred CChhhHhhhccCCCC
Q 037878 256 TSKPTESETQVMDMD 270 (2280)
Q Consensus 256 ~~~~~~~~l~~~~l~ 270 (2280)
+++.+...+..+.++
T Consensus 597 Lp~~~~~ai~~l~~g 611 (776)
T 4gut_A 597 LSEKKMKAINSLGAG 611 (776)
T ss_dssp CCHHHHHHHHHEEEE
T ss_pred CCHHHHHHHHhCCCe
Confidence 998887776554433
No 103
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=99.43 E-value=1.1e-12 Score=168.37 Aligned_cols=46 Identities=11% Similarity=0.073 Sum_probs=43.9
Q ss_pred eCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEe
Q 037878 1621 GKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYI 1668 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~ 1668 (2280)
++++||++|+||++++|.+|++||++|+||++|+|+++ +|++++|.
T Consensus 355 ~~v~Ig~~~~Ig~~~~I~~gv~Ig~~~vi~~gsvv~~~--vp~~~~v~ 400 (401)
T 2ggo_A 355 LGAFIGGHVRTGINVTILPGVKIGAYARIYPGAVVNRD--VGYGEFFK 400 (401)
T ss_dssp CCCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTCEEC
T ss_pred cCcEECCCeEECCCcEEcCCcEECCCcEECCCCeEccc--cCCCcEEe
Confidence 47999999999999999999999999999999999999 99999874
No 104
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=99.43 E-value=1.7e-13 Score=162.54 Aligned_cols=100 Identities=14% Similarity=0.068 Sum_probs=78.1
Q ss_pred eeCCCceeccCCccc-CCcceEECCCcEeCCCcEEeeccc--------CCCceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1575 KIGRYCSIRAINPVS-CPQQVTLGAGVHLGDFSRIIPGFY--------SSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~-~~~~~~iG~~~~i~~~~~i~~~~~--------~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
.||++|.|+..+.+. ....++||++|.|+++|.|.++.. .......++++||++|+||++++|.+|++||+
T Consensus 107 ~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG~ 186 (252)
T 3jqy_B 107 IIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVGS 186 (252)
T ss_dssp EECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEECT
T ss_pred EECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEECC
Confidence 355555555544332 133699999999999999965421 11123557799999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceee
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMI 1676 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~ 1676 (2280)
||+||++|+|+++ +|+++++.|+||..+.
T Consensus 187 ~~~IgagsvV~~~--vp~~~~~~G~Pa~~i~ 215 (252)
T 3jqy_B 187 GSVIGYGSIVTKD--VPSMCAAAGNPAKIIK 215 (252)
T ss_dssp TCEECTTCEECSC--BCTTEEEEETTEEEEE
T ss_pred CCEECCCCEECcc--cCCCCEEEccCCEEEc
Confidence 9999999999999 9999999999964443
No 105
>4eqy_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; ssgcid, beta helix, structural genomics, seattle structural center for infectious disease, transferase; 1.80A {Burkholderia thailandensis}
Probab=99.42 E-value=1.8e-12 Score=156.54 Aligned_cols=86 Identities=17% Similarity=0.187 Sum_probs=71.2
Q ss_pred eeCCCceeccCCccc-----CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1575 KIGRYCSIRAINPVS-----CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~-----~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.||+++.|+.++.+. ..+.+.||++|.|+.++.|. ..++||++|+||+++.+.++++||++++|
T Consensus 102 ~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~-----------~~~~IG~~v~i~~~~~i~~~v~Igd~~~I 170 (283)
T 4eqy_A 102 VIGDRNTIREFTTIHTGTVQDAGVTTLGDDNWIMAYVHIG-----------HDCRVGSHVVLSSNAQMAGHVEIGDWAIV 170 (283)
T ss_dssp EECSSCEECTTEEEECCCTTTTSEEEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECTTCEE
T ss_pred EECCCcccCcceeEccceecCCCceEECCCcEECceeEEc-----------CCcEECCCcEECCCceEcCCcEECCCeEE
Confidence 455555555443332 23469999999999999995 56899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
|++|+|.++-.|++++++.|..
T Consensus 171 g~~a~V~~~v~Ig~~~vvg~~s 192 (283)
T 4eqy_A 171 GGMSGVHQYVRIGAHSMLGGAS 192 (283)
T ss_dssp CTTCEECTTCEECTTCEECTTC
T ss_pred ecCCEEcCCeEECCCcEECCCC
Confidence 9999999997789999998775
No 106
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.41 E-value=4.1e-13 Score=152.95 Aligned_cols=105 Identities=17% Similarity=0.235 Sum_probs=89.6
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC-------CceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS-------IGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~-------~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||++|+|+.++.+.....++||++|+|+++|.|.++.+.. +....++++||++||||.+++|++|++||+
T Consensus 74 ~~~IG~~~~I~~~~~i~~~~~v~IG~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 153 (199)
T 3ftt_A 74 NVKLGKNVYVNTNCYFMDGGQITIGDNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGE 153 (199)
T ss_dssp TEEECSSEEECTTEEEECSSCEEECSSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEECT
T ss_pred CcEECCCeEECCCeEEecCCEEEECCCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEECC
Confidence 6899999999988777667789999999999999996554321 223578999999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceeeeccc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTM 1680 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~ 1680 (2280)
||+||++|+|+++ +|+++++.|+|| +.+|+..
T Consensus 154 ~~vIgagsvV~~d--vp~~~v~~G~Pa-k~i~~~~ 185 (199)
T 3ftt_A 154 GSVIGAGSVVTKD--IPPHSLAVGNPC-KVVRKID 185 (199)
T ss_dssp TCEECTTCEECSC--BCTTEEEETTTT-EEEEECC
T ss_pred CCEECCCCEECcc--cCCCCEEEEECC-EEEeeCC
Confidence 9999999999999 999999999995 4444443
No 107
>3hsq_A Acyl-[acyl-carrier-protein]--UDP-N- acetylglucosamine O-acyltransferase; L.interrogans LPXA, LPXA, LPXA acyltransferase; 2.10A {Leptospira interrogans} SCOP: b.81.1.0 PDB: 3i3a_A* 3i3x_A*
Probab=99.41 E-value=2.5e-12 Score=153.44 Aligned_cols=86 Identities=9% Similarity=0.095 Sum_probs=71.7
Q ss_pred CeeCCCceeccCCccc----CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1574 AKIGRYCSIRAINPVS----CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~----~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
..||++|.|+.++.+. ..+.+.||++|.|+.++.|+ +.++||++++|++++.+..+++||++++|
T Consensus 80 v~IG~~~~Ig~~~~I~~~~~~~~~~~IG~~~~I~~~~~I~-----------~~~~IG~~~~i~~~~~i~~~v~Igd~~~I 148 (259)
T 3hsq_A 80 TVIGDHNIFREYSNIHKGTKEDSPTVIGNKNYFMGNSHVG-----------HDCILGNNNILTHGAVLAGHVTLGNFAFI 148 (259)
T ss_dssp EEECSSCEECTTCEEECCSBTTBCEEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECSSCEE
T ss_pred EEECCCcEECCCCEECCCccCCCcEEECCCcEEcCCcEEC-----------CCcEECCccEEcCCceECCccEECCCcEE
Confidence 3456666665544433 34579999999999999995 66899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
|++|+|.++-.+++++++.|.
T Consensus 149 g~~a~V~~~v~Ig~~~~Vg~~ 169 (259)
T 3hsq_A 149 SGLVAVHQFCFVGDYSMVAGL 169 (259)
T ss_dssp CSSEEECTTCEECTTCEECSS
T ss_pred eCCCEECCCCEECCCCEECCC
Confidence 999999999777999988765
No 108
>1b37_A Protein (polyamine oxidase); flavin-dependent amine oxidase, oxidoreductase; HET: NAG FCA MAN FAD; 1.90A {Zea mays} SCOP: c.3.1.2 d.16.1.5 PDB: 1b5q_A* 1h81_A* 1h82_A* 1h83_A* 1h84_A* 1h86_A* 3kpf_A* 3ku9_A* 3l1r_A*
Probab=99.40 E-value=3e-12 Score=167.93 Aligned_cols=80 Identities=16% Similarity=0.176 Sum_probs=65.7
Q ss_pred EcCCHHHHHHHHHhHC-----------CCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccc--c
Q 037878 184 FKGGYTSLWQKLSKYL-----------PTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNG--K 250 (2280)
Q Consensus 184 ~~gG~~~l~~~la~~l-----------g~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~--i 250 (2280)
++||++.++++|++.+ +.+|++|++|++|+.+++++ .|++.+| ++++||+||+|+|+.+... +
T Consensus 201 ~~gG~~~l~~~l~~~l~~~~~~~~~i~~~~i~~~~~V~~i~~~~~~v--~v~~~~g--~~~~ad~vI~a~~~~~l~~~~~ 276 (472)
T 1b37_A 201 DQRGYEAVVYYLAGQYLKTDDKSGKIVDPRLQLNKVVREIKYSPGGV--TVKTEDN--SVYSADYVMVSASLGVLQSDLI 276 (472)
T ss_dssp CTTCTTHHHHHHHHTTSCBCTTTCCBCCTTEESSCCEEEEEECSSCE--EEEETTS--CEEEESEEEECSCHHHHHTTSS
T ss_pred cCCcHHHHHHHHHHhccccccccccccccEEEcCCEEEEEEEcCCcE--EEEECCC--CEEEcCEEEEecCHHHhccCCe
Confidence 4799999999999876 46899999999999988865 5778888 4789999999999988655 5
Q ss_pred ccCCCCChhhHhhhccC
Q 037878 251 FYRSPTSKPTESETQVM 267 (2280)
Q Consensus 251 ~f~p~~~~~~~~~l~~~ 267 (2280)
.|.|++++.+...+..+
T Consensus 277 ~~~p~Lp~~~~~ai~~~ 293 (472)
T 1b37_A 277 QFKPKLPTWKVRAIYQF 293 (472)
T ss_dssp EEESCCCHHHHHHHHHS
T ss_pred eECCCCCHHHHHHHHhc
Confidence 68888887776665433
No 109
>4e79_A UDP-3-O-acylglucosamine N-acyltransferase; lipopolysaccaride synthesis; 2.66A {Acinetobacter baumannii} PDB: 4e75_A
Probab=99.40 E-value=7.5e-12 Score=155.52 Aligned_cols=54 Identities=15% Similarity=0.198 Sum_probs=49.5
Q ss_pred EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1619 IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1619 ~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
..+.++||++|+|++++.+.++++||++|+||++|+|..+..|++++++.|.|.
T Consensus 242 I~~~v~IG~~~~i~~~~~i~~~v~IG~~~~Ig~~s~V~~~~~Ig~~~vv~g~s~ 295 (357)
T 4e79_A 242 IAHNVHIGSNTAIAAKCGIAGSTKIGKNCILAGACGVAGHLSIADNVTLTGMSM 295 (357)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECSSEEECTTCE
T ss_pred cCCCeEECCCCEECCCCEECCCcEECCCCEECcCCEECCCeEECCCCEEeecCE
Confidence 346799999999999999999999999999999999998777999999999763
No 110
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.40 E-value=8.1e-13 Score=150.00 Aligned_cols=104 Identities=15% Similarity=0.182 Sum_probs=87.7
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC-------CceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS-------IGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~-------~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||++++|+.++.+.....++||++|.|+++|.|.++.+.. +....++++||++||||.+++|++|++||+
T Consensus 76 ~v~IG~~~~I~~~~~i~~~~~i~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (195)
T 3nz2_A 76 TIRIGDHTFINMNVVMLDGAPITIGDHVLIGPSTQFYTASHSLDYRRRQAWETICKPIVIEDDVWIGGNVVINQGVTIGA 155 (195)
T ss_dssp TEEECTTCEECTTEEEECSSCEEECTTCEECTTCEEECEECCSSGGGTTTCCCEECCEEECTTCEECTTCEECTTCEECT
T ss_pred CeEECCCcEECcCCEEecCceEEECCCCEECCCCEEecCCCCcccccccccceecCCeEECCCCEEcCCCEECCCCEECC
Confidence 5788889999887666666778999999999999997654321 223668899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
||+||++|+|+++ +|+++++.|+|| +.+|+.
T Consensus 156 ~~vIgagsvV~~d--vp~~~v~~G~Pa-~~i~~~ 186 (195)
T 3nz2_A 156 RSVVAANSVVNQD--VPPDTLVGGTPA-RILRSL 186 (195)
T ss_dssp TCEECTTCEECSC--BCSSEEEETTTT-EEEEEC
T ss_pred CCEECCCCEEccc--cCCCcEEEccCC-EEeccc
Confidence 9999999999999 999999999995 444544
No 111
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.39 E-value=1.1e-12 Score=148.34 Aligned_cols=104 Identities=12% Similarity=0.105 Sum_probs=88.4
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC-------CceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS-------IGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~-------~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||++++|+.++.+.....++||++|.|+++|.|.++.+.. +....++++||++||||.+++|.+|++||+
T Consensus 78 ~v~IG~~~~I~~~~~i~~~~~v~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 157 (190)
T 3hjj_A 78 NIHVGKSFFANFNCVILDVCEVRIGDHCMFAPGVHIYTATHPLHPVERNSGKEYGKPVKIGNNVWVGGGAIINPGVSIGD 157 (190)
T ss_dssp TEEECTTCEECTTCEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTSSEEEECCEEECTTCEECTTCEECTTCEECT
T ss_pred ceEECCceeeCCCeEEEeCCCeEECCceEEcCCcEEecCCccCchhhccccccccCCeEECCCCEECCCCEECCCCEECC
Confidence 5789999999988777666789999999999999996654322 223467899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
||+||++|+|+++ +|+++++.|+|| +.+|+.
T Consensus 158 ~~vIgagsvV~~d--vp~~~v~~G~Pa-~~i~~~ 188 (190)
T 3hjj_A 158 NAVIASGAVVTKD--VPNNVVVGGNPA-KVIKTI 188 (190)
T ss_dssp TCEECTTCEECSC--BCTTEEEETTTT-EEEEEC
T ss_pred CCEECCCCEECcc--cCCCCEEEccCC-EEeccC
Confidence 9999999999999 999999999995 444543
No 112
>2qia_A UDP-N-acetylglucosamine acyltransferase; LEFT-handed parallel beta helix; HET: U20; 1.74A {Escherichia coli K12} SCOP: b.81.1.1 PDB: 1lxa_A 2jf3_A* 2aq9_A* 2qiv_X* 2jf2_A
Probab=99.38 E-value=5.1e-12 Score=151.40 Aligned_cols=85 Identities=14% Similarity=0.166 Sum_probs=70.1
Q ss_pred eeCCCceeccCCcccCC-----cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1575 KIGRYCSIRAINPVSCP-----QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~-----~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.||+++.|+.++.+... +.+.||++|.|++++.|. ..++||++++|++++.+..+++||++++|
T Consensus 85 ~IG~~~~Ig~~~~I~~~~~~~~~~~~IG~~~~Ig~~~~I~-----------~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~I 153 (262)
T 2qia_A 85 EIGDRNRIRESVTIHRGTVQGGGLTKVGSDNLLMINAHIA-----------HDCTVGNRCILANNATLAGHVSVDDFAII 153 (262)
T ss_dssp EECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECTTCEE
T ss_pred EECCCceeCCCCEEcCCccCCCCcCEECCCcEEeeeeEEC-----------CCCEECCCeEECCcccccCCcEECCCcEE
Confidence 45555555554433221 469999999999999885 56799999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
|++++|.++-.+.++++..+.
T Consensus 154 g~~~~I~~~v~Ig~~~~ig~~ 174 (262)
T 2qia_A 154 GGMTAVHQFCIIGAHVMVGGC 174 (262)
T ss_dssp CTTCEECTTCEECTTCEECSS
T ss_pred ccCCEECCCCEECCCCEEccC
Confidence 999999999888999988764
No 113
>1j2z_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; UDP-N-acetylglucosamine acyltransferase, LPXA, LEFT-handed B structure; HET: SOG TLA; 2.10A {Helicobacter pylori} SCOP: b.81.1.1
Probab=99.37 E-value=5.4e-12 Score=150.88 Aligned_cols=85 Identities=13% Similarity=0.196 Sum_probs=70.1
Q ss_pred eeCCCceeccCCcccCC-----cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1575 KIGRYCSIRAINPVSCP-----QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~-----~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.||+++.|+..+.+... ..+.||+++.|++++.|. +.++||++|+|++++.+..+++||++++|
T Consensus 81 ~IG~~~~I~~~~~I~~~~~~~~~~~~IG~~~~I~~~~~I~-----------~~~~IG~~~~I~~~~~i~~~v~Igd~~~I 149 (270)
T 1j2z_A 81 IIGEDNLIREFCMINPGTEGGIKKTLIGDKNLLMAYVHVA-----------HDCVIGSHCILANGVTLAGHIEIGDYVNI 149 (270)
T ss_dssp EECSSCEECTTCEECCCCTTTTSEEEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECSSCEE
T ss_pred EECCCCEECCCeEEcCCeecCCccEEECCCcEECcccccC-----------CCcEECCCcEEcCCccccCccEECCCeEE
Confidence 45666666554443321 369999999999999884 56899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
|++++|.++-.|.+++++.+.
T Consensus 150 g~~a~V~~~v~IG~~a~Ig~~ 170 (270)
T 1j2z_A 150 GGLTAIHQFVRIAKGCMIAGK 170 (270)
T ss_dssp CTTCEECTTCEECTTCEECTT
T ss_pred ecCCEECCCcEeCCceEEecC
Confidence 999999999888899988665
No 114
>4i4d_A Peptide synthetase NRPS type II-PCP; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MLY; 2.10A {Streptomyces verticillus}
Probab=99.37 E-value=3.7e-13 Score=132.86 Aligned_cols=75 Identities=9% Similarity=0.238 Sum_probs=70.8
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
+.+++|+.|+++|+++||++ .|+.++|||++|||||.+++++.+|++.+|+.+++.++|++||+++||+++.+..
T Consensus 13 ~~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~pTi~~la~~l~~~~ 87 (93)
T 4i4d_A 13 RRRALERDIAAIWAETLGRD--SVGPHEDFAALGGNSIHAIXITNRVEELVDAELSIRVLLETRTVAGMTDHVHATL 87 (93)
T ss_dssp HHHHHHHHHHHHHHHHHTCS--CCCTTCCTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHHCSHHHHHHHHHHHT
T ss_pred CCCHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCcHHHHHHHHHHHHHHhCCCCCHHHHHcCCCHHHHHHHHHHHc
Confidence 46789999999999999996 7999999999999999999999999999999999999999999999999998754
No 115
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=99.37 E-value=2.1e-12 Score=151.60 Aligned_cols=106 Identities=13% Similarity=0.069 Sum_probs=80.1
Q ss_pred HHHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCc---eEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1569 LRLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIG---FIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1569 lR~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~---~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
....|+.||+++.|+.++.+.....+.||++|.||++|.|..+...++. ....+++||++|+||.+++|++|++||+
T Consensus 160 ~~~~gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~ 239 (287)
T 3mc4_A 160 SSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQ 239 (287)
T ss_dssp HHHTCCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECT
T ss_pred eeccCeEECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECC
Confidence 3455788888888877665554455666666666666666543322221 1234689999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceee
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMI 1676 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~ 1676 (2280)
||+||++|+|.++ +|+++++.|+||..+.
T Consensus 240 ~a~IGagsvV~kd--Vp~~svvvG~PAkii~ 268 (287)
T 3mc4_A 240 CSKIAAGSVVLKS--VPHNVTVAGVPARIIG 268 (287)
T ss_dssp TCEECTTCEECSC--BCTTEEEETTTTEEEE
T ss_pred CCEECCCCEEccc--cCCCCEEEccCCEEeC
Confidence 9999999999999 9999999999954443
No 116
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.37 E-value=1.4e-12 Score=147.12 Aligned_cols=104 Identities=18% Similarity=0.206 Sum_probs=87.9
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC-------CceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS-------IGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~-------~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||++++|+..+.+.....++||++|.|+++|.|.++.+.. +....++++||++||||.+++|++|++||+
T Consensus 76 ~~~IG~~~~i~~~~~i~~~~~i~IG~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~ 155 (188)
T 3srt_A 76 NIHVGENFFANYDCIFLDVCKIEIGDNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNVWIGGGVIITPGITIGD 155 (188)
T ss_dssp TEEECTTEEECTTEEEECSSCEEECSSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSCEECTTCEECTTCEECS
T ss_pred CeEECCcccccCceEEecCCceEECCeeEECCCcEEeeCCccCchhhccccceECCCcEECCCcEEcCCCEECCCcEECC
Confidence 5789999999987767666788999999999999996544321 222457899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
||+||++|+|+++ +|+++++.|+|| +.+|+.
T Consensus 156 ~~vIgagsvV~~d--vp~~~v~~G~Pa-~vi~~i 186 (188)
T 3srt_A 156 NVVIGAGSVVTKD--IPPNTVAVGNPC-RVIKKI 186 (188)
T ss_dssp SEEECTTCEECSC--BCSSEEEETTTT-EEEEEC
T ss_pred CCEECCCCEECcc--cCCCCEEEccCC-EEeccC
Confidence 9999999999999 999999999995 444543
No 117
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.37 E-value=1.1e-12 Score=146.44 Aligned_cols=99 Identities=12% Similarity=0.091 Sum_probs=85.5
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC-------CceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS-------IGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~-------~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||++++|+.++.+.+...++|||+|.|+++|.|.++.+.- +....++++||++||||.+++|++|++||+
T Consensus 72 ~v~IG~~~~I~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv~IG~ 151 (182)
T 1ocx_A 72 NIFLGNNFFANFDCVMLDVCPIRIGDNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGVTIGD 151 (182)
T ss_dssp TEEECSSEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTCEECT
T ss_pred CEEECCCcEEeCCeEEEeccceEEcCCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCcEECC
Confidence 5789999999987767667789999999999999996543211 112357899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
||+||++|+|+++ +|+++++.|+||.
T Consensus 152 ~~vIgagsvV~~d--ip~~~vv~G~Pa~ 177 (182)
T 1ocx_A 152 NVVVASGAVVTKD--VPDNVVVGGNPAR 177 (182)
T ss_dssp TCEECTTCEECSC--BCSSEEEETTTTE
T ss_pred CCEECCCCEECCc--CCCCcEEEccccE
Confidence 9999999999999 9999999999954
No 118
>3eh0_A UDP-3-O-[3-hydroxymyristoyl] glucosamine N- acyltransferase; LPXD, LEFT-handed parallel beta helix, acyl carrier protein, antibiotic resistance; 2.60A {Escherichia coli}
Probab=99.36 E-value=1.4e-11 Score=152.70 Aligned_cols=54 Identities=19% Similarity=0.196 Sum_probs=49.4
Q ss_pred EeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCC
Q 037878 1619 IFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQS 1672 (2280)
Q Consensus 1619 ~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa 1672 (2280)
..+.++||++|+|+.++.+.++++||++|+||++|+|.++-.|++++++.|.+.
T Consensus 237 I~~~v~IG~~~~i~~~~~i~g~v~IG~~~~Ig~~s~V~~~v~Ig~~~vv~a~s~ 290 (341)
T 3eh0_A 237 IAHNVVIGDNTAVAGGVIMAGSLKIGRYCMIGGASVINGHMEICDKVTVTGMGM 290 (341)
T ss_dssp ECTTCEECTTCEECTTCEECTTEEECTTCEECTTCEECSSEEECSSEEECTTCE
T ss_pred EeCCcEECCCCEECCCCEECCCcEECCCcEEcCCCEECCCCEECCCCEEeeCCE
Confidence 346789999999999999999999999999999999999767999999999873
No 119
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.33 E-value=2.1e-12 Score=144.78 Aligned_cols=103 Identities=14% Similarity=0.123 Sum_probs=86.4
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCC-------CceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSS-------IGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~-------~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+++||++++|+.++.+.+...++||++|+|+++|.|.+..+.- +....++++||++||||.+++|++|++||+
T Consensus 74 ~v~IG~~~~i~~~~~i~~~~~i~IG~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~gv~IG~ 153 (185)
T 2p2o_A 74 NIHVGENFFMNFDGVILDVCEVRIGDHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPGVTIGD 153 (185)
T ss_dssp TEEECTTEEECSSEEEECSSCEEECTTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTTCEECT
T ss_pred CEEECCeeEEcCCeEEEeccceEECCCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCCCEECC
Confidence 5789999999887666666789999999999999996543211 112357899999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEecCCCceeeec
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYIGSQSPVMIKN 1678 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~ 1678 (2280)
||+||++|+|+++ +|+++++.|+|| +.+|+
T Consensus 154 ~~vIgagsvV~~~--vp~~~vv~G~Pa-~vi~~ 183 (185)
T 2p2o_A 154 NAVIASGAVVTKD--VPANAVVGGNPA-KVIKW 183 (185)
T ss_dssp TCEECTTCEECSC--BCTTEEEEETTE-EEEEE
T ss_pred CCEECCCCEECCC--CCCCcEEEcccC-EEeee
Confidence 9999999999999 999999999995 44443
No 120
>1dny_A Non-ribosomal peptide synthetase peptidyl carrier protein; four-helix bundle, modular enzyme, domain, flexible region; NMR {Brevibacillus brevis} SCOP: a.28.1.2 PDB: 2gdw_A 2gdx_A 2gdy_A 2k2q_A
Probab=99.33 E-value=9.1e-13 Score=129.21 Aligned_cols=75 Identities=15% Similarity=0.199 Sum_probs=70.1
Q ss_pred CChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1077 MSNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1077 ~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.+.+++|+.|+++|+++||++ .|+.++|||++|||||.+++++.++++.+|+++++.++|++||+++||+++.+.
T Consensus 10 ~p~~~~e~~l~~i~~~vL~~~--~i~~~~~Ff~lGgdSL~a~~l~~~l~~~~g~~l~~~~l~~~~Ti~~la~~i~~~ 84 (91)
T 1dny_A 10 APTNAVESKLAEIWERVLGVS--GIGILDNFFQIGGHSLKAMAVAAQVHREYQVELPLKVLFAQPTIKALAQYVATR 84 (91)
T ss_dssp CCSSHHHHHHHHHHHHHHTCS--SCCSSCCTTSSCCSSHHHHHHHHHHHHHCCCCCCHHHHHHSCSHHHHHHHHHC-
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHh
Confidence 356889999999999999996 899999999999999999999999999999999999999999999999998753
No 121
>3t57_A UDP-N-acetylglucosamine O-acyltransferase domain- protein; LEFT-handed parallel beta helix, lipid A biosynthesis, lipid synthesis; 2.10A {Arabidopsis thaliana}
Probab=99.33 E-value=2.2e-11 Score=148.60 Aligned_cols=86 Identities=15% Similarity=0.182 Sum_probs=73.0
Q ss_pred CeeCCCceeccCCccc----CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1574 AKIGRYCSIRAINPVS----CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~----~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.+||+++.|+..+.+. ..+.+.||+++.|+.++.|. +.++||++|+|++++.+..+++|||+++|
T Consensus 109 i~IG~~~~I~~~~~I~~g~~~~~~~~IG~~~~I~~~~~I~-----------~~~~IG~~~~i~~~~~i~g~v~Igd~~~I 177 (305)
T 3t57_A 109 LCIGNNNEIREFCSIHRSSKPSDKTVIGDNNLIMGSCHIA-----------HDCKIGDRNIFANNTLLAGHVVVEDNTHT 177 (305)
T ss_dssp EEECSSCEECTTCEEECCSSTTCCEEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECSSCEE
T ss_pred EEECCCcccCceEEEeecccccCccEEccCccccceEEEe-----------CceEeCCceEECCCcccCCCCEECCceEE
Confidence 3577777777665543 24679999999999999985 67899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
|+++.|.++-.|.+++++.+.
T Consensus 178 g~~~~V~~~v~IG~~a~ig~g 198 (305)
T 3t57_A 178 AGASVVHQFCHIGSFAFIGGG 198 (305)
T ss_dssp CTTCEECTTCEECTTCEECTT
T ss_pred cCCCEEcCCeEECCCCEEcCC
Confidence 999999998888888888765
No 122
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=99.31 E-value=4.6e-12 Score=146.08 Aligned_cols=113 Identities=9% Similarity=0.073 Sum_probs=84.4
Q ss_pred CCeeCCCceeccCC---cc-----------cCCcceEECCCcEeCCCcEEeec-----ccC-------------------
Q 037878 1573 GAKIGRYCSIRAIN---PV-----------SCPQQVTLGAGVHLGDFSRIIPG-----FYS------------------- 1614 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~---~~-----------~~~~~~~iG~~~~i~~~~~i~~~-----~~~------------------- 1614 (2280)
++.||++++|+... .+ .+...++||++|.|+++|.|.+. ...
T Consensus 24 ~v~IG~~t~I~~~~~~~~~~~~~~~i~~~~~i~~~v~IG~~~~I~~~v~i~~~~~~~h~~~~v~~~~~~~~~~~~~~~~~ 103 (212)
T 3eev_A 24 NIIVGKHSYYSGYYHGHSFDDCVRYLHPERDDVDKLVIGSFCSIGSGAVFMMAGNQGHRSDWISTFPFFYQDNDNFADAR 103 (212)
T ss_dssp TEEECSSCEECCGGGCSCGGGGEETCCSSCSSSCCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGSCCGGGTTCC
T ss_pred CeEECCCeEEccccCccccccceeEECCCccccCCcEECCCCEECCCCEEEeCCCCcccccceeeccceeeccccccccc
Confidence 57788888876311 00 12357899999999999987432 111
Q ss_pred CCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeecccchhhHHH
Q 037878 1615 SIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTMHALDDRI 1687 (2280)
Q Consensus 1615 ~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~~~~~~~l 1687 (2280)
.+....++++||++|+||++|+|++|++||++|+||++|+|+++ +|++++|.|+||..+.+|...+..+++
T Consensus 104 ~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~d--Vp~~~vv~G~PAk~i~~~~~~~~~~~l 174 (212)
T 3eev_A 104 DGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKD--VAPYEVVGSNPAKHIKFRFSDVEIAML 174 (212)
T ss_dssp CCCCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEETTTTEEEEESSCHHHHHHH
T ss_pred CCcccCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEccc--cCCCcEEEecCCEEEeccCCHHHHHHH
Confidence 11124578999999999999999999999999999999999999 999999999996555445444333333
No 123
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=99.31 E-value=1.5e-11 Score=145.05 Aligned_cols=80 Identities=23% Similarity=0.298 Sum_probs=62.0
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
+.||++|+|++++.+.+..... ..++++||++|+||.+++|.+|++||++|+|+++|+|+++ +|+++++.|+||.
T Consensus 140 ~~IG~~~~I~~~~~i~~~~~~~---~~~~~~Ig~~~~IG~~~~I~~~~~Ig~~~~I~~gsvV~~~--vp~~~v~~G~Pak 214 (240)
T 3r8y_A 140 ATVGKNCHVGAGAVLAGVIEPP---SAKPVIVEDDVVIGANVVVLEGVTVGKGAVVAAGAVVTED--VPPYTVVAGTPAR 214 (240)
T ss_dssp CEECTTCEECTTCEECCCCSCT---TSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEEETTEE
T ss_pred CEECCCcEECCCcEECCCccCC---CCCCcEECCCCEECCCCEECCCcEECCCCEECCCCEECCC--cCCCcEEEccCCE
Confidence 4555556666666653322111 2267899999999999999999999999999999999999 9999999999954
Q ss_pred eeeecc
Q 037878 1674 VMIKNT 1679 (2280)
Q Consensus 1674 ~~~~~~ 1679 (2280)
.+++.
T Consensus 215 -~i~~~ 219 (240)
T 3r8y_A 215 -VIKEI 219 (240)
T ss_dssp -EEEEC
T ss_pred -EEecC
Confidence 44443
No 124
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=99.30 E-value=1.3e-11 Score=143.77 Aligned_cols=67 Identities=31% Similarity=0.477 Sum_probs=61.3
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCc
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
++|||+|+|++++.|. +.++||++|+||.+++|.+|++||++++||++|+|+++ +|+++++.|+||+
T Consensus 148 ~~Ig~~~~i~~~~~i~-----------~~v~Ig~~~~Ig~~~~i~~~~~Ig~~~~igagsvv~~~--v~~~~~~~G~Pa~ 214 (220)
T 4ea9_A 148 CRLGAACHLGPASALA-----------GGVSVGERAFLGVGARVIPGVTIGADTIVGAGGVVVRD--LPDSVLAIGVPAK 214 (220)
T ss_dssp CEECTTCEECTTCEEC-----------SSCEECTTCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTCEEETTTTE
T ss_pred CEECCCCEECCCCEEc-----------CCCEECCCCEECCCCEEcCCcEECCCCEECCCCEEccc--cCCCcEEEEeCCE
Confidence 6777788888888874 56899999999999999999999999999999999999 9999999999965
No 125
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=99.28 E-value=1.5e-11 Score=142.59 Aligned_cols=113 Identities=14% Similarity=0.187 Sum_probs=82.1
Q ss_pred CCeeCCCceec-------cCCcc----cCCcceEECCCcEeCCCcEEe----ecccCCCc--------------------
Q 037878 1573 GAKIGRYCSIR-------AINPV----SCPQQVTLGAGVHLGDFSRII----PGFYSSIG-------------------- 1617 (2280)
Q Consensus 1573 G~~IG~~~~i~-------~~~~~----~~~~~~~iG~~~~i~~~~~i~----~~~~~~~~-------------------- 1617 (2280)
+++||++++|+ ..+.+ ...+.++||++|.|++++.|. +|......
T Consensus 35 ~v~IG~~t~i~~~~~~~~~~~vI~~~~~Ig~~v~IG~~~~Ig~~v~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 114 (220)
T 4hur_A 35 NILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDL 114 (220)
T ss_dssp TEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGGS
T ss_pred CEEECCCeEECCcCCcccCCeEEeCCCEECCCeEECCCCEECCCCEEEECCCCcccCCcceeeeeecccccccccccccc
Confidence 57888888772 01111 123568888888888888863 11111111
Q ss_pred eEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeecccchhhHHH
Q 037878 1618 FIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTMHALDDRI 1687 (2280)
Q Consensus 1618 ~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~~~~~~~l 1687 (2280)
...++++||++|+||.+|+|++|++||+||+||++|+|+++ +|+++++.|+||..+.+|...+..+++
T Consensus 115 ~~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~d--Vp~~~vv~G~PAk~ir~r~~~~~i~~l 182 (220)
T 4hur_A 115 PLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN--VAPYSIVGGNPLKFIRKRFSDGVIEEW 182 (220)
T ss_dssp CCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEETTTTEEEEESSCHHHHHHH
T ss_pred cccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEccc--CCCCcEEeCCCCEeehhcCCHHHHHHH
Confidence 13578999999999999999999999999999999999999 999999999996555555544433333
No 126
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=99.28 E-value=1.1e-11 Score=145.06 Aligned_cols=103 Identities=16% Similarity=0.086 Sum_probs=71.4
Q ss_pred HHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCc---eEeeCeEECCCcEEccCCeeCCCcEeCCC
Q 037878 1570 RLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIG---FIFGKVEVQDNSVIGSQSLVLPNSVVSRD 1646 (2280)
Q Consensus 1570 R~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~---~~~~~~~IG~~~~iG~~~~v~~g~~ig~~ 1646 (2280)
...|+.|+.++.|+..+.+.....+.||++|.||++|.|..+...++. ...++++||++|+||.+++|++|++||+|
T Consensus 134 ~~~g~~I~p~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~~gvtig~~~~~~~~~~~~IGd~v~IGaga~Il~gv~IG~~ 213 (267)
T 1ssq_A 134 VAFDVDIHPAAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKESGDRHPKVREGVMIGAGAKILGNIEVGKY 213 (267)
T ss_dssp HHHSCEECTTCEECSSCEESSCTTCEECTTCEECTTCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTT
T ss_pred eccceEeCCCCEECCCEEECCCCceEECCeeEECCCCEEcCCcEECCCcccCCCCCeEECCCeEEcCCCEEeCCcEECCC
Confidence 345666666555555443333334445555555555444332222211 01356899999999999999999999999
Q ss_pred cEEccCccccCCCccCCCcEEecCCCce
Q 037878 1647 VILGALSVAPMHSVLQRGGIYIGSQSPV 1674 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~~G~Pa~~ 1674 (2280)
|+||++|+|.++ ||+++++.|+||..
T Consensus 214 a~IGagsvV~~d--Vp~~~~v~G~PAr~ 239 (267)
T 1ssq_A 214 AKIGANSVVLNP--VPEYATAAGVPARI 239 (267)
T ss_dssp CEECTTCEECSC--BCTTCEEETTTTEE
T ss_pred CEECCCCEEccC--CCCCCEEEecCcEE
Confidence 999999999999 99999999999543
No 127
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=99.27 E-value=1.7e-11 Score=144.27 Aligned_cols=107 Identities=14% Similarity=0.082 Sum_probs=74.0
Q ss_pred HHcCCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCc---eEeeCeEECCCcEEccCCeeCCCcEeCCC
Q 037878 1570 RLLGAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIG---FIFGKVEVQDNSVIGSQSLVLPNSVVSRD 1646 (2280)
Q Consensus 1570 R~lG~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~---~~~~~~~IG~~~~iG~~~~v~~g~~ig~~ 1646 (2280)
...|+.|+.++.|+..+.+.....+.||++|.||++|.|..+...++. ....+++||++|+||++++|++|++||+|
T Consensus 154 ~~~g~~I~p~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~~~~~~~IGd~v~IGaga~Ilggv~IG~~ 233 (289)
T 1t3d_A 154 VTFQVDIHPAAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSGGDRHPKIREGVMIGAGAKILGNIEVGRG 233 (289)
T ss_dssp HHHSCEECTTCEECSSCEECSCTTCEECTTCEECSSCEECTTCEEECCSSSCSSCSCEECTTCEECTTCEEESSCEECTT
T ss_pred eccceEEcCCCEEcCCEEECCCCceEECCCcEECCCCEEcCCcEECCCccccCCCCeEECCCeEECCCCEEecCcEECCC
Confidence 345666666666655544433334555555555555555333222211 01356899999999999999999999999
Q ss_pred cEEccCccccCCCccCCCcEEecCCCceeeecc
Q 037878 1647 VILGALSVAPMHSVLQRGGIYIGSQSPVMIKNT 1679 (2280)
Q Consensus 1647 ~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~ 1679 (2280)
|+||++|+|+++ ||+++++.|+||. .+++.
T Consensus 234 a~IGagsvV~~d--Vp~~s~v~G~PAr-~i~~~ 263 (289)
T 1t3d_A 234 AKIGAGSVVLQP--VPPHTTAAGVPAR-IVGKP 263 (289)
T ss_dssp CEECTTCEECSC--BCTTCEEETTTTE-EEECC
T ss_pred CEECCCCEEccC--CCCCCEEEecCCE-EeCcC
Confidence 999999999999 9999999999954 44443
No 128
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=99.27 E-value=1.8e-11 Score=141.70 Aligned_cols=100 Identities=13% Similarity=0.118 Sum_probs=75.4
Q ss_pred eeCCCceeccCCcc-cCCcceEECCCcEeCCCcEEeecccC--------CCceEeeCeEECCCcEEccCCeeCCCcEeCC
Q 037878 1575 KIGRYCSIRAINPV-SCPQQVTLGAGVHLGDFSRIIPGFYS--------SIGFIFGKVEVQDNSVIGSQSLVLPNSVVSR 1645 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~-~~~~~~~iG~~~~i~~~~~i~~~~~~--------~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~ 1645 (2280)
+||++|.|+....+ .....++||++|.|+++|.|.++... ......++++||++|+||.+++|++|++||+
T Consensus 81 ~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig~ 160 (215)
T 2wlg_A 81 QIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIPN 160 (215)
T ss_dssp EECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEECS
T ss_pred EEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEECC
Confidence 46666666653221 11246788888888888888653211 0112346799999999999999999999999
Q ss_pred CcEEccCccccCCCccCCCcEEe-cCCCceee
Q 037878 1646 DVILGALSVAPMHSVLQRGGIYI-GSQSPVMI 1676 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~~-G~Pa~~~~ 1676 (2280)
+|+||++|+|+++ +|+++++. |+||..+.
T Consensus 161 ~~vIgagsvV~~~--vp~~~i~~aG~Pa~~i~ 190 (215)
T 2wlg_A 161 NVVVGSHTVLYKS--FKEPNCVIAGSPAKIVK 190 (215)
T ss_dssp SCEECTTCEECSC--CCCCSCEEETTTTEEEE
T ss_pred CCEECCCCEEcCc--cCCCeEEEcccCCEEEC
Confidence 9999999999999 99999999 99965443
No 129
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.27 E-value=1.7e-11 Score=141.76 Aligned_cols=73 Identities=21% Similarity=0.273 Sum_probs=52.6
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccc-----cCCCccCCCcEEe
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVA-----PMHSVLQRGGIYI 1668 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v-----~~~~~v~~~~~~~ 1668 (2280)
+.||++|.|++++.|. ++++||++|+||++++|.. ++||++|+||++|+| +.+..+|+|+++.
T Consensus 112 ~~IG~~v~Ig~~~~I~-----------~~v~Ig~~v~IG~~a~I~~-~~Ig~~~~Igags~V~~~~i~~~~~v~~~~vv~ 179 (213)
T 3kwd_A 112 VWIGDNVSITHMALIH-----------GPAYIGDGCFIGFRSTVFN-ARVGAGCVVMMHVLIQDVEIPPGKYVPSGMVIT 179 (213)
T ss_dssp EEECTTCEECTTCEEE-----------EEEEECTTCEECTTCEEEE-EEECTTCEECSSCEEESCEECTTBEECTTCEEC
T ss_pred eEECCCcEECCCcEEc-----------CCCEECCCCEECCCCEEeC-cEECCCCEEcCCCEECCcEeCCCCEECCCcEEc
Confidence 6777777777777774 4577888888888888775 778888888888877 4444588888888
Q ss_pred -cCCCceeeecc
Q 037878 1669 -GSQSPVMIKNT 1679 (2280)
Q Consensus 1669 -G~Pa~~~~~~~ 1679 (2280)
|+||. .+++.
T Consensus 180 ~g~pa~-~i~~~ 190 (213)
T 3kwd_A 180 TQQQAD-RLPNV 190 (213)
T ss_dssp SHHHHT-TCCBC
T ss_pred CCCCcc-ccccC
Confidence 88853 33443
No 130
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=99.26 E-value=1.6e-11 Score=139.81 Aligned_cols=109 Identities=15% Similarity=0.175 Sum_probs=85.2
Q ss_pred HHcCCeeCCCceecc---CCccc-----------CCcceEECCCcEeCCCcEEee-----cccC----------------
Q 037878 1570 RLLGAKIGRYCSIRA---INPVS-----------CPQQVTLGAGVHLGDFSRIIP-----GFYS---------------- 1614 (2280)
Q Consensus 1570 R~lG~~IG~~~~i~~---~~~~~-----------~~~~~~iG~~~~i~~~~~i~~-----~~~~---------------- 1614 (2280)
+.-+.+||++++|+. .+.+. +...++||++|.|+++|.|.+ |...
T Consensus 19 ~~~~I~IG~~~~I~~~~~~~~~~~~v~~~~~~~~~~~~i~IG~~~~Ig~~v~i~~~g~~~h~~~~~s~~p~~~~~~~~~~ 98 (212)
T 1xat_A 19 SNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPAF 98 (212)
T ss_dssp CCTTEEECTTCEECCTTTCCCGGGGEETCCSSCSSSCCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGGG
T ss_pred ccCCEEEcCCeEECCcccCccccceeEeeccccCcccCEEEcCCCEECCCCEEEeCCCCccccccccccceeeecccccc
Confidence 445789999999985 11110 236899999999999999842 3210
Q ss_pred ----CCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeeccc
Q 037878 1615 ----SIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTM 1680 (2280)
Q Consensus 1615 ----~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~ 1680 (2280)
.+....++++||++|+||.+++|++|++||++|+||++|+|+++ +|++++|.|+||..+.+|..
T Consensus 99 ~~i~~~~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~--vp~~~~~~G~Pa~~i~~~~~ 166 (212)
T 1xat_A 99 AGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGD--VEPYAIVGGNPARTIRKRFS 166 (212)
T ss_dssp GGCCCCCCCCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEETTTTEEEEESSC
T ss_pred cccccCceecCCeEECCCCEECCCCEEeCCCEECCCCEECCCCEEccc--CCCCcEEEccCCEEEcccCC
Confidence 01124568999999999999999999999999999999999999 99999999999655544443
No 131
>2bcg_G Secretory pathway GDP dissociation inhibitor; RABGTPase, geranylgeranylation, vesicular transport, protein transport; HET: GDP GER; 1.48A {Saccharomyces cerevisiae} SCOP: c.3.1.3 c.3.1.3 d.16.1.6 PDB: 1ukv_G* 3cpi_G 3cph_G 3cpj_G*
Probab=99.26 E-value=2.4e-11 Score=157.90 Aligned_cols=50 Identities=20% Similarity=0.268 Sum_probs=45.3
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEE 68 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~ 68 (2280)
|+.++||+|||||++||+||++|+++|+ +|+|+||++++||+++|++.++
T Consensus 8 ~~~~~dvvVIGaG~~GL~aA~~La~~G~-~V~vlE~~~~~GG~~~t~~~~g 57 (453)
T 2bcg_G 8 IDTDYDVIVLGTGITECILSGLLSVDGK-KVLHIDKQDHYGGEAASVTLSQ 57 (453)
T ss_dssp CCCBCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEECHHH
T ss_pred ccccCCEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCCCCCccccceeccc
Confidence 4456899999999999999999999998 6999999999999999987554
No 132
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=99.25 E-value=1.9e-11 Score=145.66 Aligned_cols=102 Identities=12% Similarity=0.069 Sum_probs=70.3
Q ss_pred cCCeeCCCceeccCCcc------cCCcceEECCCcEeCCCcEEeecccCCCc------eEeeCeEECCCcEEccCCeeCC
Q 037878 1572 LGAKIGRYCSIRAINPV------SCPQQVTLGAGVHLGDFSRIIPGFYSSIG------FIFGKVEVQDNSVIGSQSLVLP 1639 (2280)
Q Consensus 1572 lG~~IG~~~~i~~~~~~------~~~~~~~iG~~~~i~~~~~i~~~~~~~~~------~~~~~~~IG~~~~iG~~~~v~~ 1639 (2280)
.|+.|+.++.|+..+.+ .+.+.++||++|.|+++|.|++..+..+. ...++++||++|+||.+++|++
T Consensus 189 ~gv~I~p~a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~ 268 (310)
T 3f1x_A 189 TGIDIHPGAQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILG 268 (310)
T ss_dssp HSCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEES
T ss_pred CCcEECCCCEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECC
Confidence 35555555555444333 23445566666666666666544321100 1345679999999999999999
Q ss_pred CcEeCCCcEEccCccccCCCccCCCcEEecCCCcee
Q 037878 1640 NSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVM 1675 (2280)
Q Consensus 1640 g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~ 1675 (2280)
|++||+||+||++|+|.++ +|+++++.|+||...
T Consensus 269 gv~IGd~a~IGagsvV~~d--Vp~~svv~GnPAk~~ 302 (310)
T 3f1x_A 269 RVTIGKGATVGGNIWVTEN--VPAGSRIVQRKNKDE 302 (310)
T ss_dssp SCEECTTCEECSSCEECSC--BCTTCEECCCCCC--
T ss_pred CcEECCCCEECCCCEECCc--cCCCcEEECCCcccC
Confidence 9999999999999999999 999999999996433
No 133
>4e6u_A Acyl-[acyl-carrier-protein]--UDP-N-acetylglucosam acyltransferase; lipopolysaccaride synthesis; 1.41A {Acinetobacter baumannii} PDB: 4e6t_A*
Probab=99.24 E-value=7e-11 Score=141.56 Aligned_cols=86 Identities=17% Similarity=0.134 Sum_probs=71.7
Q ss_pred eeCCCceeccCCccc-----CCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE
Q 037878 1575 KIGRYCSIRAINPVS-----CPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL 1649 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~-----~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v 1649 (2280)
.||+++.|+..+.+. ..+.+.||++|.|+.++.|. +.++||++|+|++++.+.++++||++++|
T Consensus 87 ~IG~~~~Ig~~~~I~~g~~~~~~~~~IG~~~~I~~~~~I~-----------~~~~Ig~~~~i~~~~~i~~~v~Igd~~~I 155 (265)
T 4e6u_A 87 EIGNNNLIREHCSLHRGTVQDNALTKIGSHNLLMVNTHIA-----------HDCIVGDHNIFANNVGVAGHVHIGDHVIV 155 (265)
T ss_dssp EECSSCEECTTCEEECCCTTTTSEEEECSSCEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECSSCEE
T ss_pred EECCCeEECCceEECcccccCCCceEEccCcEEeeeeEEc-----------ccEEECCCcEEcCCcEECCCcEECCCeEE
Confidence 466666665554433 23469999999999999985 56899999999999999999999999999
Q ss_pred ccCccccCCCccCCCcEEecCC
Q 037878 1650 GALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1650 g~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
|++|+|.++-.|++++++.+.-
T Consensus 156 g~~a~V~~~v~Ig~~~~i~~~s 177 (265)
T 4e6u_A 156 GGNSGIHQFCKIDSYSMIGGAS 177 (265)
T ss_dssp CTTCEECTTCEECTTCEECTTC
T ss_pred cCCCEECCCcEECCCCEEcCCC
Confidence 9999999997779999987754
No 134
>2iu8_A LPXD, UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase; UDP-3- O-acyl-glucosamine N-acyltransferase, lipid A biosynthesis; HET: PLM UD1; 2.2A {Chlamydia trachomatis} PDB: 2iu9_A* 2iua_A*
Probab=99.23 E-value=1.1e-10 Score=146.95 Aligned_cols=86 Identities=19% Similarity=0.229 Sum_probs=73.1
Q ss_pred CeeCCCceeccCCcccC--CcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEcc
Q 037878 1574 AKIGRYCSIRAINPVSC--PQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGA 1651 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~--~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~ 1651 (2280)
++||++|+|+.++.+.. ...+.||+++.|+..+.|+ ..++||++|+|++++.+..+++||++|+||.
T Consensus 229 v~Ig~~v~IG~~~~I~~~~~~~t~ig~~~~i~~~v~I~-----------~~v~IG~~~~i~~~~~v~~~~~Ig~~~~Ig~ 297 (374)
T 2iu8_A 229 VIIEDDVEIGANTTIDRGRFKHSVVREGSKIDNLVQIA-----------HQVEVGQHSMIVAQAGIAGSTKIGNHVIIGG 297 (374)
T ss_dssp EEECTTCEECTTCEEEECSSSCEEECTTCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCEECSSCEECT
T ss_pred EEECCCCEECCCcEEccCcccceeECCCcEECCccccC-----------CccEECCCCEEccCcccCCCcEECCCeEEec
Confidence 68999999988766532 4568999999999998885 6679999999999999999999999999999
Q ss_pred CccccCCCccCCCcEEecC
Q 037878 1652 LSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1652 ~s~v~~~~~v~~~~~~~G~ 1670 (2280)
++.|..+-.|.+++...+.
T Consensus 298 ~~~i~~~v~Ig~~~~I~a~ 316 (374)
T 2iu8_A 298 QAGITGHICIADHVIMMAQ 316 (374)
T ss_dssp TCEECSSCEECTTEEECTT
T ss_pred CcEECCCcccCCCcEEccC
Confidence 9999888777777776543
No 135
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=99.23 E-value=4.9e-11 Score=135.49 Aligned_cols=84 Identities=23% Similarity=0.381 Sum_probs=69.1
Q ss_pred eeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCcc
Q 037878 1575 KIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSV 1654 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~ 1654 (2280)
+||++|.|++.+.+ .+.+.||++|+|+.++.|. +.++||++|+||+++.|.++++||++++||++|+
T Consensus 109 ~IG~~~~I~~~~~i--~~~~~Ig~~~~I~~~~~i~-----------~~~~Ig~~~~Ig~~~~i~~~~~Ig~~~~Igagsv 175 (194)
T 3bfp_A 109 KIEKGVILNTSSVI--EHECVIGEFSHVSVGAKCA-----------GNVKIGKNCFLGINSCVLPNLSLADDSILGGGAT 175 (194)
T ss_dssp EECTTCEECTTCEE--CTTCEECTTCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCEECTTCEECTTCE
T ss_pred EECCCCEECCCCEE--cCCCEECCCCEECCCCEEC-----------CCcEECCCCEEcCCCEECCCCEECCCCEECCCCE
Confidence 45555555544222 2347888888888888884 5689999999999999999999999999999999
Q ss_pred ccCCCccCCCcEEecCCCc
Q 037878 1655 APMHSVLQRGGIYIGSQSP 1673 (2280)
Q Consensus 1655 v~~~~~v~~~~~~~G~Pa~ 1673 (2280)
|.++ +|++++|.|+||+
T Consensus 176 v~~~--v~~~~~~~G~Pa~ 192 (194)
T 3bfp_A 176 LVKN--QDEKGVFVGVPAK 192 (194)
T ss_dssp ECSC--BCSCCEECCCCCC
T ss_pred Eccc--cCCCCEEEeeccE
Confidence 9999 9999999999964
No 136
>1yvv_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae} PDB: 3kkj_A*
Probab=99.22 E-value=2.6e-10 Score=142.51 Aligned_cols=289 Identities=15% Similarity=0.120 Sum_probs=153.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCccceeeeecccceEEecCCCCceeecccccch
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEAGAELEEMDSHKLALIDGSTGEFQDIKVADDY 100 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 100 (2280)
++||+|||||++||++|+.|+++|. +|+||||++.+||++.+.......++. ....+.... .
T Consensus 2 ~~dV~IIGaG~~Gl~~A~~L~~~G~-~V~vlE~~~~~gg~~~~~~~~~~~~~~-------------~~~~~~~~~--~-- 63 (336)
T 1yvv_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSRGSGGRMSSKRSDAGALDM-------------GAQYFTARD--R-- 63 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEEEETTEEEEC-------------SCCCBCCCS--H--
T ss_pred CceEEEECCcHHHHHHHHHHHHCCC-cEEEEECCCCCcccceeEecCCCeEec-------------CCCeEecCC--H--
Confidence 4699999999999999999999999 699999999999998876543321110 000000000 0
Q ss_pred hhhhccccccchhhhhccccchhhHHHhhhhhhhHHHHHcCCCCcchhhhhhhhcccccccccccHHHHHHHHhhccCCe
Q 037878 101 VSVISLTLELQDKAKESGRIGVHAVSDLASDLTPTYLEDRGFKSVPKSVAYGYTASGYGFVQDMPYAYIHEFTRTSMAGK 180 (2280)
Q Consensus 101 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 180 (2280)
....+. ..+.............. ........ .......
T Consensus 64 -----------------------~~~~~~----~~~~~~~~~~~~~~~~~----~~~~~~~~-----------~~~~~~~ 101 (336)
T 1yvv_A 64 -----------------------RFATAV----KQWQAQGHVAEWTPLLY----NFHAGRLS-----------PSPDEQV 101 (336)
T ss_dssp -----------------------HHHHHH----HHHHHHTSEEEECCCEE----EESSSBCC-----------CCCTTSC
T ss_pred -----------------------HHHHHH----HHHHhCCCeeeccccce----eccCcccc-----------cCCCCCc
Confidence 000000 00100000000000000 00000000 0011223
Q ss_pred EEEEcCCHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcCCcccccccccCCCCChhh
Q 037878 181 IRRFKGGYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISGAFPVKNGKFYRSPTSKPT 260 (2280)
Q Consensus 181 ~~~~~gG~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~ 260 (2280)
.+....|+..+.+++++ |.+|+++++|++|+++++++ .+++.+|+ ...+||.||+|.|.. .
T Consensus 102 ~~~~~~~~~~l~~~l~~--g~~i~~~~~v~~i~~~~~~~--~v~~~~g~-~~~~a~~vV~a~g~~--------------~ 162 (336)
T 1yvv_A 102 RWVGKPGMSAITRAMRG--DMPVSFSCRITEVFRGEEHW--NLLDAEGQ-NHGPFSHVIIATPAP--------------Q 162 (336)
T ss_dssp EEEESSCTHHHHHHHHT--TCCEECSCCEEEEEECSSCE--EEEETTSC-EEEEESEEEECSCHH--------------H
T ss_pred cEEcCccHHHHHHHHHc--cCcEEecCEEEEEEEeCCEE--EEEeCCCc-CccccCEEEEcCCHH--------------H
Confidence 45667899999999988 56899999999999988876 56677884 223599999995444 2
Q ss_pred HhhhccCCCChhhHhhhccceeeeeEEEEEeecCcccCCceeEEEecCCCCCCCCCCcceeEEe----ecCCC--cEEEE
Q 037878 261 ESETQVMDMDELEKELFSKVQTIDYYTTVLKITGLEHLPVGFYYFGEYMDDPATIGHPVAMQKF----FADTD--IFLFW 334 (2280)
Q Consensus 261 ~~~l~~~~l~~~~k~~~~~~~~~~~~~~i~~~~~l~~~p~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--~~~~~ 334 (2280)
...+... .+.....+..+.+.......+..+.-...|.. .++.+. .+...... ....+ ...++
T Consensus 163 ~~~~~~~--~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~--------~~~~~l~~~~~~p~~~~~~~~~v~ 231 (336)
T 1yvv_A 163 ASTLLAA--APKLASVVAGVKMDPTWAVALAFETPLQTPMQ-GCFVQD--------SPLDWLARNRSKPERDDTLDTWIL 231 (336)
T ss_dssp HGGGGTT--CHHHHHHHTTCCEEEEEEEEEEESSCCSCCCC-EEEECS--------SSEEEEEEGGGSTTCCCSSEEEEE
T ss_pred HHHhhcc--CHHHHHHHhhcCccceeEEEEEecCCCCCCCC-eEEeCC--------CceeEEEecCcCCCCCCCCcEEEE
Confidence 2222111 12223344556665555555444321111211 111111 01111100 01111 11222
Q ss_pred ecC-----CCCCCChHHHHHHHHHHHHhhcC----ccceEEEeecCCCCcccchhhhcchhhHHHHHHhcCcCCceeccc
Q 037878 335 SYG-----NSVDITGPTVTEVAIKTVENMGG----VIENVVLQRRFKYFPHVNSKDMKDGFYDRLEYELQGQRNTYYVGG 405 (2280)
Q Consensus 335 ~~g-----~~~~~s~~e~~~~i~~~L~~~~~----~p~~~~~~~~~~~~p~~s~~~~~~g~~~~l~~~lqg~~~~~~~G~ 405 (2280)
... ...+++++++.+.+.+.+.++.+ .|......+|...+|.+....-. + .....+++++|.
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~l~~~l~~~lg~~~~~p~~~~~~rw~~a~~~~~~~~~~---~------~~~~~rl~laGD 302 (336)
T 1yvv_A 232 HATSQWSRQNLDASREQVIEHLHGAFAELIDCTMPAPVFSLAHRWLYARPAGAHEWGA---L------SDADLGIYVCGD 302 (336)
T ss_dssp EECHHHHHHTTTSCHHHHHHHHHHHHHTTCSSCCCCCSEEEEEEEEEEEESSCCCCSC---E------EETTTTEEECCG
T ss_pred EeCHHHHHHHHhCCHHHHHHHHHHHHHHHhCCCCCCCcEEEccccCccCCCCCCCCCe---e------ecCCCCEEEEec
Confidence 211 12457899999999999999744 25667777777666666543321 1 133478999998
Q ss_pred ccc
Q 037878 406 LMA 408 (2280)
Q Consensus 406 ~~~ 408 (2280)
++.
T Consensus 303 a~~ 305 (336)
T 1yvv_A 303 WCL 305 (336)
T ss_dssp GGT
T ss_pred CCC
Confidence 764
No 137
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=99.22 E-value=3.7e-11 Score=137.60 Aligned_cols=106 Identities=15% Similarity=0.185 Sum_probs=83.6
Q ss_pred CCeeCCCceeccCC-------cc----cCCcceEECCCcEeCCCcEEee----cccCC--------------------Cc
Q 037878 1573 GAKIGRYCSIRAIN-------PV----SCPQQVTLGAGVHLGDFSRIIP----GFYSS--------------------IG 1617 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~-------~~----~~~~~~~iG~~~~i~~~~~i~~----~~~~~--------------------~~ 1617 (2280)
++.||++++|+... .+ ...+.++||++|.|+++|.|.+ |...+ +.
T Consensus 34 ~i~IG~~t~i~~~~~~~~~~~vi~~~~~i~~~v~IG~~~~I~~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~~~~~~ 113 (219)
T 4e8l_A 34 NILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDL 113 (219)
T ss_dssp SEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTCGGGCCCTTTS
T ss_pred CEEECCccEEcCCcCceecceEEeecceeCCCEEECCCCEEcCCCEEEeCCCcceecCCCcceeEecCcccccccccccc
Confidence 57899999997631 01 1245799999999999999853 32221 11
Q ss_pred eEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeeccc
Q 037878 1618 FIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTM 1680 (2280)
Q Consensus 1618 ~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~ 1680 (2280)
...++++||++|+||++++|++|++||++|+||++|+|+++ +|+++++.|+||..+.+|..
T Consensus 114 ~~~g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~d--v~~~~~~~G~Pa~~i~~r~~ 174 (219)
T 4e8l_A 114 PLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKN--VAPYSIVGGNPLKFIRKRFS 174 (219)
T ss_dssp CCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEETTTTEEEEESSC
T ss_pred cccCCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEccc--CCCCeEEEecCCEeecccCC
Confidence 23578999999999999999999999999999999999999 99999999999655544443
No 138
>3lax_A Phenylacetate-coenzyme A ligase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; 1.43A {Bacteroides vulgatus}
Probab=99.20 E-value=4.6e-11 Score=122.02 Aligned_cols=97 Identities=24% Similarity=0.300 Sum_probs=68.8
Q ss_pred ecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCCCC----HH
Q 037878 910 GRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKPVD----KD 985 (2280)
Q Consensus 910 GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~~~----~~ 985 (2280)
.|.|||||++|+||+|.|||++|.+||+|.+ +++++++++..+ +. ..++++..++...+ ++
T Consensus 1 srADDmIiv~G~nv~P~eIE~vl~~~p~v~~---~~vv~v~~~~~~----------~~--~~~~V~~~~~~~~~~~~~~~ 65 (109)
T 3lax_A 1 SNADDMIILKGVNIFPIQIETILLQFKELGS---DYLITLETAESN----------DE--MTVEVELSQLFTDDYGRLQA 65 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTCTTEEE---EEEEEEEEETTE----------EE--EEEEEEECTTCCCCHHHHHH
T ss_pred CCcCEEEEECCEEECHHHHHHHHHhCCCccc---ceEEEEeccccc----------ee--EEEEEEEeeccccccchhhh
Confidence 4999999999999999999999999999865 777777665322 12 22233333343333 45
Q ss_pred HHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccch
Q 037878 986 VIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKR 1023 (2280)
Q Consensus 986 l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR 1023 (2280)
+.+.+++++..++.++. .+.++.+++||+| +||++|
T Consensus 66 l~~~i~~~l~~~~gv~~-~v~~v~~~~lPrt-sGKi~R 101 (109)
T 3lax_A 66 LTREITRQLKDEILVTP-RVKLVPKGALPKS-EGKAVR 101 (109)
T ss_dssp HHHHHHHHHHHHHSSCC-EEEEECTTCSCCC----CCC
T ss_pred hHHHHHHHHHHHhCCcc-ceEEEcCCeecCC-CCCcch
Confidence 66778888888877764 5677888899998 799988
No 139
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=99.20 E-value=1.5e-11 Score=142.37 Aligned_cols=89 Identities=13% Similarity=0.090 Sum_probs=65.3
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||.++.|.+.. .. .++||++|.|+.++.|++.... ...++++||++||||.+++| |++||+||+||+||
T Consensus 192 a~Ig~g~~In~~i--~i--Gv~IGd~v~IgpGa~IgG~~~~---~~~~~V~IGDnv~IGanAtI--gVtIGd~~iIGAGS 262 (332)
T 3fsy_A 192 AGTLGASMVEGRI--SA--GVVVGDGSDVGGGASIMGTLSG---GGTHVISIGKRCLLGANSGL--GISLGDDCVVEAGL 262 (332)
T ss_dssp EEESSCCEECSEE--CT--TCEECTTCEECTTCEECSBCC------CCBCEECTTCEECTTCEE--CSCBCSSCEECTTC
T ss_pred CeECcCCEECCce--ec--ceEECCCCEECCCCEEcCCCCC---CCccceEECCCCEECCCCEE--eeEECCCCEECCCC
Confidence 3455555555431 11 1788888888888888644321 23468999999999999999 99999999999999
Q ss_pred cccCCCc--------cCCCcEEecCC
Q 037878 1654 VAPMHSV--------LQRGGIYIGSQ 1671 (2280)
Q Consensus 1654 ~v~~~~~--------v~~~~~~~G~P 1671 (2280)
+|++|.. +|++.+|.++|
T Consensus 263 VVtkdt~I~~~~g~~v~a~el~g~~~ 288 (332)
T 3fsy_A 263 YVTAGTRVTMPDSNSVKARELSGSSN 288 (332)
T ss_dssp EECTTCEEECTTSCEEEGGGGTTCSS
T ss_pred EECCCCEEEeCCCCEEEhHHhcCCCC
Confidence 9998843 45666666776
No 140
>3p1w_A Rabgdi protein; GDI RAB, malaria, structural genomics consortium, SGC, trans PF10_0345, protein transport; 1.85A {Plasmodium falciparum 3D7}
Probab=99.19 E-value=1.3e-10 Score=148.41 Aligned_cols=61 Identities=21% Similarity=0.205 Sum_probs=49.0
Q ss_pred CCeEEEEcCCHHHHHHHHHh---HCCCceEeCcceEEEEE-cCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 178 AGKIRRFKGGYTSLWQKLSK---YLPTEVHCNSEVLAIRR-DSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~---~lg~~I~l~t~V~~I~~-~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
...+..++||+++|++++++ ..|++|+++++|++|.. +++++ ..|++.+| ++++||+||++
T Consensus 245 ~s~~~yp~gG~~~L~~aL~r~~~~~Gg~i~l~t~V~~I~~d~~g~v-~gV~~~~G--~~i~Ad~VI~a 309 (475)
T 3p1w_A 245 KSPFIYPLYGLGGIPEGFSRMCAINGGTFMLNKNVVDFVFDDDNKV-CGIKSSDG--EIAYCDKVICD 309 (475)
T ss_dssp SCSEEEETTCTTHHHHHHHHHHHHC--CEESSCCEEEEEECTTSCE-EEEEETTS--CEEEEEEEEEC
T ss_pred CCceEEECCCHHHHHHHHHHHHHHcCCEEEeCCeEEEEEEecCCeE-EEEEECCC--cEEECCEEEEC
Confidence 45666799999999999975 45899999999999998 55554 57888888 47999999998
No 141
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=99.17 E-value=5.1e-11 Score=142.42 Aligned_cols=103 Identities=16% Similarity=0.089 Sum_probs=68.2
Q ss_pred HHcCCeeCCCceeccCCcccC------CcceEECCCcEeCCCcEEeecccCCCce-----EeeCeEECCCcEEccCCeeC
Q 037878 1570 RLLGAKIGRYCSIRAINPVSC------PQQVTLGAGVHLGDFSRIIPGFYSSIGF-----IFGKVEVQDNSVIGSQSLVL 1638 (2280)
Q Consensus 1570 R~lG~~IG~~~~i~~~~~~~~------~~~~~iG~~~~i~~~~~i~~~~~~~~~~-----~~~~~~IG~~~~iG~~~~v~ 1638 (2280)
...|+.||.++.|+..+.+.. .+.+.||++|.|++++.|++....+... ...+++||++|+||++|+|+
T Consensus 160 ~~~gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Il 239 (313)
T 3q1x_A 160 SYTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVL 239 (313)
T ss_dssp HHHCCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEE
T ss_pred ecCCeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEEC
Confidence 345677766666666544433 3345555555555555554433322111 12357999999999999999
Q ss_pred CCcEeCCCcEEccCccccCCCccCCCcEEe--cCCCce
Q 037878 1639 PNSVVSRDVILGALSVAPMHSVLQRGGIYI--GSQSPV 1674 (2280)
Q Consensus 1639 ~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~--G~Pa~~ 1674 (2280)
+|++||+||+||++|+|+++ +|+|+++. |+||..
T Consensus 240 ggv~IG~~a~IGagsvV~~d--Vp~gs~vvi~G~PAkv 275 (313)
T 3q1x_A 240 GNIIVGSHVRIGANCWIDRD--VDSNQTVYISEHPTHF 275 (313)
T ss_dssp SSCEECSSEEECTTCEECSC--BCSSEEC---------
T ss_pred CCcEECCCCEECCCCEECCC--cCCCCEEEEcCCCcEE
Confidence 99999999999999999999 99999998 999543
No 142
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.17 E-value=8.7e-11 Score=138.83 Aligned_cols=54 Identities=22% Similarity=0.263 Sum_probs=45.7
Q ss_pred ceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCC----EECCCCEECcCCccCC
Q 037878 1336 LVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGS----VIGEEAEVAPLQKSEG 1400 (2280)
Q Consensus 1336 ~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~----~ig~~a~ig~~s~v~~ 1400 (2280)
...|++++.|++++.|. +.+.||++|+|+++++|..++ +||+++.|++++.|..
T Consensus 59 ~~~I~~~~~I~~~a~I~-----------g~v~IG~~~~I~~~~~I~~~~~~~i~IG~~~~Ig~~~~I~~ 116 (247)
T 1qre_A 59 APVIDPTAYIDPQASVI-----------GEVTIGANVMVSPMASIRSDEGMPIFVGDRSNVQDGVVLHA 116 (247)
T ss_dssp CCEECTTCEECTTCEEE-----------ESEEECTTCEECTTCEEEESSSCCEEECTTCEECTTCEEEE
T ss_pred CcEECCCcEECCCCEEe-----------CCcEECCCCEECCCcEEecCCCCCEEECCCCEECCCeEEEe
Confidence 46788889888888885 567899999999999998765 8999999999888744
No 143
>2bi7_A UDP-galactopyranose mutase; FAD, flavoprotein, isomerase, lipopolysaccharide biosynthesi; HET: FAD; 2.0A {Klebsiella pneumoniae} SCOP: c.4.1.3 d.16.1.7 PDB: 2bi8_A* 1wam_A* 3inr_A* 3gf4_A* 3int_A* 3kyb_A*
Probab=99.16 E-value=2.6e-11 Score=153.57 Aligned_cols=46 Identities=28% Similarity=0.406 Sum_probs=43.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeec
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIE 67 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~ 67 (2280)
++||+|||||++||+||++|+++|+ +|+|+|+++++||+++|.+.+
T Consensus 3 ~~~v~iiG~G~~Gl~~A~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~ 48 (384)
T 2bi7_A 3 SKKILIVGAGFSGAVIGRQLAEKGH-QVHIIDQRDHIGGNSYDARDS 48 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSSSSGGGCEEECT
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-cEEEEEecCCcCCcccccccc
Confidence 5799999999999999999999998 799999999999999998763
No 144
>1krr_A Galactoside O-acetyltransferase; LEFT-handed parallel beta helix; HET: ACO; 2.50A {Escherichia coli} SCOP: b.81.1.3 PDB: 1kqa_A* 1kru_A* 1krv_A*
Probab=99.15 E-value=2.7e-11 Score=136.92 Aligned_cols=90 Identities=21% Similarity=0.332 Sum_probs=76.7
Q ss_pred cCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccC---CCcceEeeeEEEccCeEEccceeEcCCcE
Q 037878 2184 GAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEG---DGGKVKFGKIRIGEGGFVGSRAAAMPGVR 2258 (2280)
Q Consensus 2184 g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~g~~ 2258 (2280)
|.+|-||++++++.++.+.+...|+|| |+|.|+++|.|.+ |.... ..+.....+++||++||||++|+|+||++
T Consensus 73 g~~i~IG~~~~I~~~~~i~~~~~i~IG-~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~a~I~~gv~ 151 (203)
T 1krr_A 73 GSNIHIGRNFYANFNLTIVDDYTVTIG-DNVLIAPNVTLSVTGHPVHHELRKNGEMYSFPITIGNNVWIGSHVVINPGVT 151 (203)
T ss_dssp STTEEECSSCEECSCEEEECSSCEEEC-SSCEECSSCEEESEECCSSTTTCTTCCBEECCEEECTTCEECTTCEECTTCE
T ss_pred CCCeEECCeeEECCccEEecccceEEC-CCCEECCCCEEecCCcccchhhcccCceeCCCcEECCCeEECCCCEEeCCeE
Confidence 333336799999999889988999999 9999999999987 54432 12345678999999999999999999999
Q ss_pred eCCCceecccceeecc
Q 037878 2259 IENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2259 ~~~~~~~~~~s~~~~~ 2274 (2280)
||++++||++|+|+|.
T Consensus 152 IG~~~vIgagsvV~~d 167 (203)
T 1krr_A 152 IGDNSVIGAGSIVTKD 167 (203)
T ss_dssp ECTTCEECTTCEECSC
T ss_pred ECCCCEECCCCEECCC
Confidence 9999999999999985
No 145
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=99.15 E-value=1e-10 Score=133.32 Aligned_cols=107 Identities=16% Similarity=0.161 Sum_probs=83.7
Q ss_pred cCCeeCCCceeccCC--cc---------cCCcceEECCCcEeCCCcEEee----cccCC--------------------C
Q 037878 1572 LGAKIGRYCSIRAIN--PV---------SCPQQVTLGAGVHLGDFSRIIP----GFYSS--------------------I 1616 (2280)
Q Consensus 1572 lG~~IG~~~~i~~~~--~~---------~~~~~~~iG~~~~i~~~~~i~~----~~~~~--------------------~ 1616 (2280)
-++.||++++|+... .+ .....++||++|.|+++|.|.+ |...+ .
T Consensus 28 ~~i~IG~~~~I~~~~~~~i~~~~i~~~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~~ 107 (209)
T 1mr7_A 28 ENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLDQ 107 (209)
T ss_dssp TTEEECTTCEEECSSSCCGGGGEESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGGG
T ss_pred CCeEECCCcEEcCCCceEEeceEEeeccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCccccccccccc
Confidence 478999999998641 11 1245699999999999998743 22211 0
Q ss_pred ceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEecCCCceeeeccc
Q 037878 1617 GFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQSPVMIKNTM 1680 (2280)
Q Consensus 1617 ~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~Pa~~~~~~~~ 1680 (2280)
....++++||++|+||++++|++|++||++++||++|+|+++ +|+++++.|+||..+.++..
T Consensus 108 ~~~~~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~~--v~~~~i~~G~Pa~~i~~~~~ 169 (209)
T 1mr7_A 108 LPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKD--IAPYMLAGGNPANEIKQRFD 169 (209)
T ss_dssp SCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSC--BCTTEEEEETTEEEEEESSC
T ss_pred ccccCCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcCC--CCCCeEEEeeCCEEeeccCC
Confidence 124567999999999999999999999999999999999999 99999999999655433443
No 146
>2e1m_A L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=99.14 E-value=1.5e-10 Score=144.02 Aligned_cols=48 Identities=35% Similarity=0.477 Sum_probs=44.2
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecC-CCCCceEEEEee
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY-HTVGGMCESVEI 66 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~-~riGG~~~t~~~ 66 (2280)
++.++||+|||||+|||+||+.|+++|+ +|+|||++ +++||+++|++.
T Consensus 41 ~~~~~~V~IIGAGiaGL~aA~~L~~~G~-~V~VlE~~~~~vGGr~~t~~~ 89 (376)
T 2e1m_A 41 PGPPKRILIVGAGIAGLVAGDLLTRAGH-DVTILEANANRVGGRIKTFHA 89 (376)
T ss_dssp CCSCCEEEEECCBHHHHHHHHHHHHTSC-EEEEECSCSSCCBTTCCEECC
T ss_pred CCCCceEEEECCCHHHHHHHHHHHHCCC-cEEEEeccccccCCceeeecc
Confidence 4456899999999999999999999998 79999999 999999999873
No 147
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=99.14 E-value=3.6e-10 Score=136.00 Aligned_cols=66 Identities=12% Similarity=0.211 Sum_probs=34.3
Q ss_pred HHHHcCCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCE
Q 037878 1312 WFEMLGAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAE 1391 (2280)
Q Consensus 1312 ~~R~lGa~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ 1391 (2280)
.++..|++|++++.|.. .+.||++|.|+++ .+. ..+.||++|.|+.+++|+.++.||+++.
T Consensus 124 ~~~~~g~~I~p~a~I~~-------~v~Ig~g~~I~~~-~I~-----------~~~~IG~~~~I~~~~~Ig~~~~IG~~v~ 184 (304)
T 3eg4_A 124 EFEKAGFRAVPNCIVRH-------SAYIAPNAILMPS-FVN-----------LGAYVDKGAMIDTWATVGSCAQIGKNVH 184 (304)
T ss_dssp HHHHHCCEECTTCEEBT-------TCEECTTCEECSE-EEC-----------TTCEECTTCEECTTEEECTTCEECTTCE
T ss_pred HhccCCcEEcCCEEECC-------CcEECCCCEEeCC-EEC-----------CCCEECCCcEEcCCcEECCCCccCCCcE
Confidence 45667888887776653 2346666666553 221 2233555555554444444444444444
Q ss_pred ECcCC
Q 037878 1392 VAPLQ 1396 (2280)
Q Consensus 1392 ig~~s 1396 (2280)
|++++
T Consensus 185 I~~~~ 189 (304)
T 3eg4_A 185 LSGGV 189 (304)
T ss_dssp ECTTC
T ss_pred ECCCC
Confidence 44433
No 148
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=99.13 E-value=1.7e-10 Score=137.62 Aligned_cols=75 Identities=17% Similarity=0.227 Sum_probs=51.1
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCC-------------c
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHS-------------V 1660 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~-------------~ 1660 (2280)
++||++|+|+.++.|.+... ....++++||++|+||.+++|.+|++||++|+||++|+|+++. .
T Consensus 152 ~~IG~~v~I~~~~~i~g~~~---~~~~~~v~IGd~v~IG~~a~I~~gv~IG~~avIgagsvV~~~~~I~~~~~~~~~~g~ 228 (276)
T 3gos_A 152 AQIGKNVHLSGGVGIGGVLE---PLQANPTIIEDNCFVGARSEVVEGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGR 228 (276)
T ss_dssp CEECTTCEECTTCEECCCCS---STTSCCCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCCEEETTTCCEECSE
T ss_pred CEECCCCEECCCCEECCccc---cCCCCCeEECCCCEECCCCEECCCCEECCCCEECCCCEECCCcEEccccccceeccc
Confidence 45555566665555532110 1122567888888888888888888888888888888888711 3
Q ss_pred cCCCcEE-ecC-C
Q 037878 1661 LQRGGIY-IGS-Q 1671 (2280)
Q Consensus 1661 v~~~~~~-~G~-P 1671 (2280)
||+++++ .|+ |
T Consensus 229 Vp~~svvv~G~~P 241 (276)
T 3gos_A 229 VPAGSVVVSGNLP 241 (276)
T ss_dssp ECTTEEEEEEEEE
T ss_pred cCCCcEEECCCcc
Confidence 9999999 497 7
No 149
>3ayj_A Pro-enzyme of L-phenylalanine oxidase; amino acid oxidase, flavoenzyme, L- binding, oxidoreductase; HET: FAD PHE; 1.10A {Pseudomonas} PDB: 2yr4_A* 2yr6_A* 3ayi_A* 2yr5_A* 3ayl_A*
Probab=99.13 E-value=8.9e-11 Score=155.71 Aligned_cols=97 Identities=10% Similarity=-0.011 Sum_probs=73.1
Q ss_pred CCeEEEEcCCHHHHHHHHHhHC--CCceEeCcceE--EEEEcCCc-----cEEEE-EeCCCceEEEEeCEEEEcCCcccc
Q 037878 178 AGKIRRFKGGYTSLWQKLSKYL--PTEVHCNSEVL--AIRRDSTT-----VGVDV-KHSNGECEVMEFDKIIISGAFPVK 247 (2280)
Q Consensus 178 ~~~~~~~~gG~~~l~~~la~~l--g~~I~l~t~V~--~I~~~~~~-----v~V~v-~t~~G~~~~i~aD~VI~A~p~~v~ 247 (2280)
...++.+.||+++|+++|++++ |..|++|++|+ +|.+++++ ..|.| .+.+|+.++++||+||+|+|++++
T Consensus 336 ~~~~~~i~GG~~~L~~aLa~~l~~g~~I~l~~~V~~~~I~~~~~g~~~~~~~V~V~~~~~G~~~~~~aD~VIvTvP~~~L 415 (721)
T 3ayj_A 336 SNEYTLPVTENVEFIRNLFLKAQNVGAGKLVVQVRQERVANACHSGTASARAQLLSYDSHNAVHSEAYDFVILAVPHDQL 415 (721)
T ss_dssp TCEECCSSSSTHHHHHHHHHHHHHHTTTSEEEEEECEEEEEEEECSSSSCCEEEEEEETTCCEEEEEESEEEECSCHHHH
T ss_pred ccceeEECCcHHHHHHHHHHhcccCCceEeCCEEEeeeEEECCCCCccccceEEEEEecCCceEEEEcCEEEECCCHHHH
Confidence 4567889999999999999998 78899999999 99886544 12455 456675457899999999999987
Q ss_pred c------ccc-------c--------------CCC-C-C-------hhhHhhhccCCCChhhH
Q 037878 248 N------GKF-------Y--------------RSP-T-S-------KPTESETQVMDMDELEK 274 (2280)
Q Consensus 248 ~------~i~-------f--------------~p~-~-~-------~~~~~~l~~~~l~~~~k 274 (2280)
. .|. + .|+ . + ..+...+..+.++...|
T Consensus 416 ~~~~~r~~i~~~~~~~~~~~~~~~~~~~~~~~~pplLlp~~~~~~~~~~~~Ai~~l~~~~s~K 478 (721)
T 3ayj_A 416 TPIVSRSGFEHAASQNLGDAGLGLETHTYNQVYPPLLLSDSSPAANARIVTAIGQLHMARSSK 478 (721)
T ss_dssp HHHHSSSCSSCEEEEEESCGGGTCCCEEEEEEBCSSCCCSSCHHHHHHHHHHHHTCCEECEEE
T ss_pred hhccccccccccccccccccccccccccccccCCcccCCcccccccHHHHHHHHhcCcccceE
Confidence 3 355 3 344 4 6 66777777776666555
No 150
>3fs8_A QDTC; acetyltransferase, natural product, deoxysugar; HET: ACO; 1.70A {Thermoanaerobacteriumthermosaccharolyticum} PDB: 3fsb_A* 3fsc_A*
Probab=99.12 E-value=5.5e-10 Score=134.78 Aligned_cols=85 Identities=14% Similarity=0.112 Sum_probs=67.3
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC----------CcE
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP----------NSV 1642 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~----------g~~ 1642 (2280)
+++||+++.|+..+. ..+.+.||++|.|++++.|+ ..++||++++++.++.+.. +++
T Consensus 106 ~~~Ig~~~~Ig~~~~--i~~~~~IG~~~~I~~~~~I~-----------~~~~ig~~~~i~~~~~i~~~~~~~~~~~~~v~ 172 (273)
T 3fs8_A 106 NTKIGNNVKIGTLSD--IQHHVYIGNYVNIHSNVFVG-----------EKSIIKDFVWLFPHVVLTNDPTPPSNELLGVT 172 (273)
T ss_dssp SCEECSSCEECTTCE--ECSSCEECSSCEECTTCEEC-----------TTCEECTTCEECTTCEECCCSSSSCSCCCCCE
T ss_pred CCEECCCCEECccce--eCCceEECCceEECCCCEEC-----------CCceeCCceeecCceEecCCCCCcccccCCcE
Confidence 367777777776532 23458888888888888885 4568899999988888876 799
Q ss_pred eCCCcEEccCccccCCCccCCCcEEecC
Q 037878 1643 VSRDVILGALSVAPMHSVLQRGGIYIGS 1670 (2280)
Q Consensus 1643 ig~~~~vg~~s~v~~~~~v~~~~~~~G~ 1670 (2280)
||+++.||++++|.++-.|.++++....
T Consensus 173 Ig~~~~IG~~~~I~~g~~IG~~~~Igag 200 (273)
T 3fs8_A 173 IELFAVIAARSVVLPGIHINEDALVGAG 200 (273)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTT
T ss_pred ECCCeEEcCCCEEcCCCEECCCCEECCC
Confidence 9999999999999988888888877443
No 151
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=99.12 E-value=1.2e-10 Score=140.14 Aligned_cols=93 Identities=17% Similarity=0.205 Sum_probs=64.5
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||++|.|... ..+.+.+.||++|+|+.++.|.+..+. ...++++||++|+||.+++|++|++||+||+||++|
T Consensus 175 ~~IG~~~~I~~~--~~Ig~~~~IG~~v~I~~~~~I~~~~~~---~~~~~v~IGd~v~IG~~a~I~~gv~IG~g~vIgags 249 (316)
T 3tk8_A 175 AYVDEGTMVDTW--ATVGSCAQIGKNVHLSGGVGIGGVLEP---LQANPVIIEDNCFIGARSEVVEGVIVEENSVISMGV 249 (316)
T ss_dssp CEECTTCEECTT--EEECTTCEECTTCEECTTCEECCCCSS---TTSCCCEECTTCEECTTCEECTTCEECTTCEECTTC
T ss_pred CEECCCCEEccc--eEECCCCEECCCCEEcCCCEECCCccc---ccCCCcEECCCCEECCCCEEcCCCEECCCCEEcCCC
Confidence 345555555443 111223456666666666666432111 134678999999999999999999999999999999
Q ss_pred cccCCC-------------ccCCCcEE-ecC-C
Q 037878 1654 VAPMHS-------------VLQRGGIY-IGS-Q 1671 (2280)
Q Consensus 1654 ~v~~~~-------------~v~~~~~~-~G~-P 1671 (2280)
+|.++. .||+|+++ .|+ |
T Consensus 250 vV~~~t~I~d~~~~~v~~g~Vp~gsvVvaGsvP 282 (316)
T 3tk8_A 250 YLGQSTKIYDRETGEVTYGRIPAGSVVVAGNLP 282 (316)
T ss_dssp EECTTCCEEETTTCCEECSEECTTEEEEEEEEE
T ss_pred EEcCCeeecccccccccccEeCCCCEEECCCCc
Confidence 999821 39999999 597 7
No 152
>1v0j_A UDP-galactopyranose mutase; flavoprotein, isomerase; HET: FAD BCN; 2.25A {Mycobacterium tuberculosis}
Probab=99.12 E-value=9.2e-12 Score=158.86 Aligned_cols=48 Identities=27% Similarity=0.307 Sum_probs=44.4
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCCCCCceEEEEee
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYHTVGGMCESVEI 66 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~riGG~~~t~~~ 66 (2280)
|..++||+|||||++||+||++|+++ |+ +|+|+|+++++||+++|.+.
T Consensus 4 m~~~~~v~IiGaG~~Gl~aA~~L~~~~g~-~v~v~E~~~~~GG~~~~~~~ 52 (399)
T 1v0j_A 4 MTARFDLFVVGSGFFGLTIAERVATQLDK-RVLVLERRPHIGGNAYSEAE 52 (399)
T ss_dssp CCCSCSEEEECCSHHHHHHHHHHHHHSCC-CEEEECSSSSSSGGGCEEEC
T ss_pred ccccCCEEEECCCHHHHHHHHHHHHhCCC-CEEEEeCCCCCCCeeeeccc
Confidence 44568999999999999999999999 98 69999999999999999886
No 153
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=99.11 E-value=7.5e-11 Score=137.77 Aligned_cols=77 Identities=16% Similarity=0.048 Sum_probs=56.7
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
++||++|.|.+...+ . ++||++|+|+.+|.|++.... ...++++||++|+||++++| |++||+||+||++|
T Consensus 215 a~IGdg~iI~~~a~i--g--v~IGdnv~IgpGa~IgG~~~~---~~~~~V~IGdnv~IGAnAtI--GVtIGd~~iIGAGS 285 (347)
T 3r5d_A 215 AGTEGPGMIEGRVSA--G--VFVGKGSDLGGGCSTMGTLSG---GGNIVISVGEGCLIGANAGI--GIPLGDRNIVEAGL 285 (347)
T ss_dssp EEESSSEEECSEECT--T--CEECTTEEECTTCEECC---------CCCCEECTTCEECTTCEE--CSCBCTTCEECTTC
T ss_pred CEECCCcEEcCCceE--e--EEECCCCEECCCCEEccccCC---CCccceEECCCCEECCCCEE--eeEECCCCEECCCC
Confidence 455666666554211 1 778888888888888543211 13468999999999999999 99999999999999
Q ss_pred cccCCC
Q 037878 1654 VAPMHS 1659 (2280)
Q Consensus 1654 ~v~~~~ 1659 (2280)
+|++|.
T Consensus 286 VVtkdt 291 (347)
T 3r5d_A 286 YITAGT 291 (347)
T ss_dssp EECTTC
T ss_pred EECCCC
Confidence 999994
No 154
>3gxs_A Phenylacetate-coenzyme A ligase; APC62324.1, structural genomics, PSI-2, protein structure initiative; 1.43A {Bacteroides vulgatus atcc 8482} PDB: 3lax_A
Probab=99.11 E-value=1.6e-10 Score=117.69 Aligned_cols=97 Identities=22% Similarity=0.249 Sum_probs=69.0
Q ss_pred ecCCCeEEECCeeechHHHHHHHHhccCCcCCceeEEEeccccccccccccccCCCCceEEEEEEEecCCCC-----CCH
Q 037878 910 GRIKDLIIVAGRNVYSADVEKTVESSTEHIRPGCCAVIGVPEEVLSTKGISVSDGSDQVGLVVIAEVRDGKP-----VDK 984 (2280)
Q Consensus 910 GR~dd~IKi~G~rI~~~EIE~~L~~~p~v~~~~~aaVv~~~~~~~~~~~~~~~~~~~~~~~vv~~~~~~~~~-----~~~ 984 (2280)
||+||+||++|+||+|.|||++|.+||+|.. +++++++++. ....++++++. ++.. ..+
T Consensus 1 GR~~D~Iiv~G~nv~P~eIE~~l~~~p~v~~---~~~v~v~~~~------------~~e~l~~~ve~-~~~~~~~~~~~~ 64 (109)
T 3gxs_A 1 SNADDMIILKGVNIFPIQIETILLQFKELGS---DYLITLETAE------------SNDEMTVEVEL-SQLFTDDYGRLQ 64 (109)
T ss_dssp CGGGSCEEETTEEECHHHHHHHHHTCTTEEE---EEEEEEEEET------------TEEEEEEEEEE-CTTCCCCHHHHH
T ss_pred CCccCEEEECCEEECHHHHHHHHHhCCCcCC---cEEEEEEcCC------------CceEEEEEEEE-cCccccchhHHH
Confidence 8999999999999999999999999999864 5555554431 11223334444 3321 225
Q ss_pred HHHHHHHHHHHHhcCcceeEEEEecCCCccCCCCcccchH
Q 037878 985 DVIENIKTRVVEEHGVTVASVKLIKPRTMSKTTSGKIKRF 1024 (2280)
Q Consensus 985 ~l~~~l~~~l~~~~~~~~~~~~lv~~~~lP~t~sGKvdR~ 1024 (2280)
++.+.+++++...+.++. .+.++.+.+||+| |||++|.
T Consensus 65 ~l~~~i~~~l~~~~~~~~-~v~~v~~~~lPrt-sGKi~R~ 102 (109)
T 3gxs_A 65 ALTREITRQLKDEILVTP-RVKLVPKGALPKS-EGKAVRV 102 (109)
T ss_dssp HHHHHHHHHHHHHHSSCC-EEEEECTTCSCCC----CCCE
T ss_pred HHHHHHHHHHHHhhCCce-EEEEECCCCccCC-CCceEEE
Confidence 678889999988888775 5677777899999 9999983
No 155
>1d5t_A Guanine nucleotide dissociation inhibitor; ultra-high resolution, hydrolase inhibitor; 1.04A {Bos taurus} SCOP: c.3.1.3 d.16.1.6 PDB: 1lv0_A* 1gnd_A
Probab=99.11 E-value=3e-10 Score=146.53 Aligned_cols=47 Identities=15% Similarity=0.205 Sum_probs=44.1
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEe
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVE 65 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~ 65 (2280)
|+.++||+|||||++||+||++|+++|+ +|+|+|+++++||+++|++
T Consensus 3 ~~~~~~v~iiG~G~~gl~~a~~l~~~g~-~v~~~e~~~~~gg~~~s~~ 49 (433)
T 1d5t_A 3 MDEEYDVIVLGTGLTECILSGIMSVNGK-KVLHMDRNPYYGGESSSIT 49 (433)
T ss_dssp CCSBCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTTSCEEC
T ss_pred CCCcCCEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCCccccccccc
Confidence 5567899999999999999999999998 6999999999999999987
No 156
>3ftt_A Putative acetyltransferase sacol2570; galactoside O-acetyltransferase, enzyme, structural genomics, acyltransferase; 1.60A {Staphylococcus aureus subsp} PDB: 3v4e_A* 4dcl_A 4egg_A
Probab=99.09 E-value=1.3e-10 Score=132.23 Aligned_cols=85 Identities=25% Similarity=0.452 Sum_probs=75.3
Q ss_pred ccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccC---CCcceEeeeEEEccCeEEccceeEcCCcEeCCCc
Q 037878 2189 LGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEG---DGGKVKFGKIRIGEGGFVGSRAAAMPGVRIENGG 2263 (2280)
Q Consensus 2189 ~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~---~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~ 2263 (2280)
||++++|+.++.+.+...|+|| |+|.|+++|.|.+ |.... ..+....++|+||++||||++|+|+||++||+++
T Consensus 77 IG~~~~I~~~~~i~~~~~v~IG-~~v~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~IG~~v~IG~~~~I~~gv~IG~~~ 155 (199)
T 3ftt_A 77 LGKNVYVNTNCYFMDGGQITIG-DNVFIGPNCGFYTATHPLNFHHRNEGFEKAGPIHIGSNTWFGGHVAVLPGVTIGEGS 155 (199)
T ss_dssp ECSSEEECTTEEEECSSCEEEC-SSEEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSEEECTTCEECTTCEECTTC
T ss_pred ECCCeEECCCeEEecCCEEEEC-CCCEECCCCEEecCCCcCccccccccceecCCeEEcCCcEEcCCCEECCCCEECCCC
Confidence 5599999999999999999999 9999999999988 43332 2345668999999999999999999999999999
Q ss_pred eecccceeecc
Q 037878 2264 SLSSLSLAMKE 2274 (2280)
Q Consensus 2264 ~~~~~s~~~~~ 2274 (2280)
+||++|+|+|.
T Consensus 156 vIgagsvV~~d 166 (199)
T 3ftt_A 156 VIGAGSVVTKD 166 (199)
T ss_dssp EECTTCEECSC
T ss_pred EECCCCEECcc
Confidence 99999999984
No 157
>1i8t_A UDP-galactopyranose mutase; rossman fold, FAD, contractase, isomerase; HET: FAD; 2.40A {Escherichia coli} SCOP: c.4.1.3 d.16.1.7
Probab=99.08 E-value=1.2e-10 Score=146.58 Aligned_cols=46 Identities=33% Similarity=0.377 Sum_probs=42.5
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEE 68 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~ 68 (2280)
+||+|||||++||+||++|+++|+ +|+|+|+++++||++++...++
T Consensus 2 ~~v~iiG~G~~Gl~~A~~l~~~g~-~v~v~E~~~~~GG~~~~~~~~g 47 (367)
T 1i8t_A 2 YDYIIVGSGLFGAVCANELKKLNK-KVLVIEKRNHIGGNAYTEDCEG 47 (367)
T ss_dssp EEEEEECCSHHHHHHHHHHGGGTC-CEEEECSSSSSSGGGCEEEETT
T ss_pred CCEEEECcCHHHHHHHHHHHhCCC-cEEEEecCCCCCcceEeeccCC
Confidence 589999999999999999999998 6999999999999999977543
No 158
>3kwd_A Carbon dioxide concentrating mechanism protein; LEFT-handed beta helix, gamma carbonic anhydrase, disulfide dependent activity; 1.10A {Thermosynechococcus elongatus} PDB: 3kwe_A 3kwc_A
Probab=99.07 E-value=4.4e-10 Score=129.95 Aligned_cols=75 Identities=17% Similarity=0.198 Sum_probs=61.9
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||++|.|+..+.+. ..++|||+|+||.++.|. + ++||++|+||++++| .+++|++++.|++++
T Consensus 112 ~~IG~~v~Ig~~~~I~--~~v~Ig~~v~IG~~a~I~-----------~-~~Ig~~~~Igags~V-~~~~i~~~~~v~~~~ 176 (213)
T 3kwd_A 112 VWIGDNVSITHMALIH--GPAYIGDGCFIGFRSTVF-----------N-ARVGAGCVVMMHVLI-QDVEIPPGKYVPSGM 176 (213)
T ss_dssp EEECTTCEECTTCEEE--EEEEECTTCEECTTCEEE-----------E-EEECTTCEECSSCEE-ESCEECTTBEECTTC
T ss_pred eEECCCcEECCCcEEc--CCCEECCCCEECCCCEEe-----------C-cEECCCCEEcCCCEE-CCcEeCCCCEECCCc
Confidence 5688888887764332 348999999999999983 3 899999999999999 689999999999999
Q ss_pred cccCCCccCCCc
Q 037878 1654 VAPMHSVLQRGG 1665 (2280)
Q Consensus 1654 ~v~~~~~v~~~~ 1665 (2280)
++.++ .|+..
T Consensus 177 vv~~g--~pa~~ 186 (213)
T 3kwd_A 177 VITTQ--QQADR 186 (213)
T ss_dssp EECSH--HHHTT
T ss_pred EEcCC--CCccc
Confidence 99876 55544
No 159
>1ocx_A Maltose O-acetyltransferase; LEFT-handed parallel beta-helix; 2.15A {Escherichia coli} SCOP: b.81.1.3
Probab=99.06 E-value=1.2e-10 Score=130.02 Aligned_cols=91 Identities=20% Similarity=0.293 Sum_probs=76.7
Q ss_pred hcCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccCC---CcceEeeeEEEccCeEEccceeEcCCc
Q 037878 2183 MGAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEGD---GGKVKFGKIRIGEGGFVGSRAAAMPGV 2257 (2280)
Q Consensus 2183 ~g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~g~ 2257 (2280)
+|.+|-+|++++++.++.+.+...|+|| |+|.|+++|.|.+ |..... .+....++++||++||||++|+|++|+
T Consensus 69 ~g~~v~IG~~~~I~~~~~i~~~~~i~IG-~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v~Ig~~a~I~~gv 147 (182)
T 1ocx_A 69 YGYNIFLGNNFFANFDCVMLDVCPIRIG-DNCMLAPGVHIYTATHPIDPVARNSGAELGKPVTIGNNVWIGGRAVINPGV 147 (182)
T ss_dssp SSTTEEECSSEEECSSEEEECSSCEEEC-TTCEECTTCEEECEECCSSHHHHTTTCBEECCEEECTTCEECTTCEECTTC
T ss_pred eCCCEEECCCcEEeCCeEEEeccceEEc-CCcEEeCCcEEEeCCCccChhhcccCccccCCeEEeCCeEECCCCEECCCc
Confidence 3444445699999999899989999999 9999999999998 544311 123346789999999999999999999
Q ss_pred EeCCCceecccceeecc
Q 037878 2258 RIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2258 ~~~~~~~~~~~s~~~~~ 2274 (2280)
+||++++||++|+|+|.
T Consensus 148 ~IG~~~vIgagsvV~~d 164 (182)
T 1ocx_A 148 TIGDNVVVASGAVVTKD 164 (182)
T ss_dssp EECTTCEECTTCEECSC
T ss_pred EECCCCEECCCCEECCc
Confidence 99999999999999986
No 160
>3srt_A Maltose O-acetyltransferase; structural genomics, the center structural genomics of infectious diseases, csgid; 2.50A {Clostridium difficile} PDB: 4ebh_A*
Probab=99.06 E-value=9e-11 Score=132.30 Aligned_cols=103 Identities=15% Similarity=0.230 Sum_probs=81.9
Q ss_pred CCcchHHHHHHHhcCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccC---CCcceEeeeEEEccCe
Q 037878 2171 SGSFLFVAWMKLMGAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEG---DGGKVKFGKIRIGEGG 2245 (2280)
Q Consensus 2171 ~~~~~~~~~~r~~g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~---~~~~~~~~~~~~~~~~ 2245 (2280)
.++.+...+...+|.++-+|++++|+.++.+.+...|+|| |+|.|+++|.+.+ |.... ..+....++++||++|
T Consensus 61 ~~~~I~~~~~~~~g~~~~IG~~~~i~~~~~i~~~~~i~IG-~~~~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IG~~v 139 (188)
T 3srt_A 61 KQINVEQNIRCDYGYNIHVGENFFANYDCIFLDVCKIEIG-DNVMLAPNVQIYTAYHPIDAQLRNSGIEYGSPVKIGDNV 139 (188)
T ss_dssp SCEEECSCEEESSSTTEEECTTEEECTTEEEECSSCEEEC-SSCEECTTCEEECEECCSSHHHHHTTEEEECCEEECSSC
T ss_pred CCCEEcCCEEEEeCCCeEECCcccccCceEEecCCceEEC-CeeEECCCcEEeeCCccCchhhccccceECCCcEECCCc
Confidence 3344444333344533335599999999999988999999 9999999999998 44331 1344557899999999
Q ss_pred EEccceeEcCCcEeCCCceecccceeecc
Q 037878 2246 FVGSRAAAMPGVRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2246 ~~g~~~~~~~g~~~~~~~~~~~~s~~~~~ 2274 (2280)
|||++|+|+||++||++++||++|+|+|.
T Consensus 140 ~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (188)
T 3srt_A 140 WIGGGVIITPGITIGDNVVIGAGSVVTKD 168 (188)
T ss_dssp EECTTCEECTTCEECSSEEECTTCEECSC
T ss_pred EEcCCCEECCCcEECCCCEECCCCEECcc
Confidence 99999999999999999999999999985
No 161
>4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus}
Probab=99.06 E-value=1.6e-11 Score=162.45 Aligned_cols=75 Identities=11% Similarity=0.203 Sum_probs=0.0
Q ss_pred CChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1077 MSNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1077 ~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
.+.+++|+.|+++|+++||++ +|+.+||||++|||||+|++++++|++ +|+++++.+||++|||++||+++++..
T Consensus 41 ~p~~~~e~~l~~~w~~~l~~~--~i~~~~~ff~lGg~Sl~a~~l~~~~~~-~~~~~~~~~~~~~~t~~~la~~~~~~~ 115 (508)
T 4f6l_B 41 EPSNEIEQTFVDVFGEVLKQN--DVGVDDDFFELGGNSLEAMLVVSHLKR-FGHHISMQTLYQYKTVRQIVNYMYQNQ 115 (508)
T ss_dssp ------------------------------------------------------------------------------
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCCChHHcCchHHHHHHHHHHHHH-cCCCccHHHHhcCCcHHHHHHHHHhhc
Confidence 467889999999999999997 899999999999999999999999986 899999999999999999999997643
No 162
>2afd_A Protein ASL1650; twisted antiparallel helical bundle, acyl carrier protein FA structural genomics, PSI, protein structure initiative; NMR {Nostoc SP} PDB: 2afe_A
Probab=99.04 E-value=3.4e-10 Score=110.76 Aligned_cols=76 Identities=25% Similarity=0.335 Sum_probs=71.6
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
+.++++++++++|+++|+++.+.++.+++||++|+|||.+++++..+++.+|++++..++|++||+++|++++.+.
T Consensus 11 ~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~~~~i~~~~~~~~~ti~~la~~l~~~ 86 (88)
T 2afd_A 11 SVEDIQSWLIDQFAQQLDVDPDDIDMEESFDNYDLNSSKALILLGRLEKWLGKELNPVLIFNYPTIAQLAKRLGEL 86 (88)
T ss_dssp SHHHHHHHHHHHHHHHHTSCGGGCCTTSCGGGTTCCSTHHHHHHHHHHHHTTSCCCGGGTTTCCSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHcCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHH
Confidence 4678899999999999999878899999999999999999999999999999999999999999999999998753
No 163
>3nz2_A Hexapeptide-repeat containing-acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid; HET: ACO; 2.35A {Vibrio cholerae o1 biovar eltor} SCOP: b.81.1.0 PDB: 3ect_A*
Probab=99.04 E-value=1.5e-10 Score=131.40 Aligned_cols=108 Identities=14% Similarity=0.234 Sum_probs=85.8
Q ss_pred HhhhcCCcchHHHHHHHhcCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccC---CCcceEeeeEE
Q 037878 2166 FVEMTSGSFLFVAWMKLMGAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEG---DGGKVKFGKIR 2240 (2280)
Q Consensus 2166 ~~~~~~~~~~~~~~~r~~g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~---~~~~~~~~~~~ 2240 (2280)
|.....++.+...+...+|.++-||++++|+.++.+.+...|+|| |+|.|+++|.|.+ |.... ..+....++++
T Consensus 56 ~~~ig~~~~I~~p~~~~ig~~v~IG~~~~I~~~~~i~~~~~i~IG-~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v~ 134 (195)
T 3nz2_A 56 FGHLGHKSCVQPPFHCEFGKTIRIGDHTFINMNVVMLDGAPITIG-DHVLIGPSTQFYTASHSLDYRRRQAWETICKPIV 134 (195)
T ss_dssp SSEECTTCEECSSEEESCSTTEEECTTCEECTTEEEECSSCEEEC-TTCEECTTCEEECEECCSSGGGTTTCCCEECCEE
T ss_pred HHhcCCCcEEcCCeEEEeCCCeEECCCcEECcCCEEecCceEEEC-CCCEECCCCEEecCCCCcccccccccceecCCeE
Confidence 334444455554444445544445699999999889889999999 9999999999998 44332 23455678999
Q ss_pred EccCeEEccceeEcCCcEeCCCceecccceeecc
Q 037878 2241 IGEGGFVGSRAAAMPGVRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2241 ~~~~~~~g~~~~~~~g~~~~~~~~~~~~s~~~~~ 2274 (2280)
||++||||++|+|+||++||++++||++|+|+|.
T Consensus 135 IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 168 (195)
T 3nz2_A 135 IEDDVWIGGNVVINQGVTIGARSVVAANSVVNQD 168 (195)
T ss_dssp ECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred ECCCCEEcCCCEECCCCEECCCCEECCCCEEccc
Confidence 9999999999999999999999999999999974
No 164
>2p2o_A Maltose transacetylase; GK1921, GKA001001921.1, geobacillus kaustophilus structural genomics, PSI; 1.74A {Geobacillus kaustophilus} PDB: 2ic7_A
Probab=99.04 E-value=1.4e-10 Score=129.99 Aligned_cols=92 Identities=22% Similarity=0.369 Sum_probs=77.1
Q ss_pred HhcCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccCC---CcceEeeeEEEccCeEEccceeEcCC
Q 037878 2182 LMGAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEGD---GGKVKFGKIRIGEGGFVGSRAAAMPG 2256 (2280)
Q Consensus 2182 ~~g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~g 2256 (2280)
.+|.++-+|++++++.++.+.+...|+|| |+|.|+++|.|.+ |..... .+....++++||++||||++|+|+||
T Consensus 70 ~~g~~v~IG~~~~i~~~~~i~~~~~i~IG-~~v~Ig~~v~I~~~~h~~~~~~~~~~~~~~~~v~IGd~v~IG~~~~I~~g 148 (185)
T 2p2o_A 70 DYGYNIHVGENFFMNFDGVILDVCEVRIG-DHCFIGPGVHIYTATHPLDPHERNSGLEYGKPVVIGHNVWIGGRAVINPG 148 (185)
T ss_dssp SCSTTEEECTTEEECSSEEEECSSCEEEC-TTCEECTTCEEECEECCSSHHHHHTCCBEECCEEECSSCEECTTCEECTT
T ss_pred EecCCEEECCeeEEcCCeEEEeccceEEC-CCcEEeCCCEEEcCCCcCChhhcccCccccCCeEEcCCeEECCCCEECCC
Confidence 34444446699999998888888999999 9999999999987 554321 12334678999999999999999999
Q ss_pred cEeCCCceecccceeecc
Q 037878 2257 VRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2257 ~~~~~~~~~~~~s~~~~~ 2274 (2280)
++||++++||++|+|+|+
T Consensus 149 v~IG~~~vIgagsvV~~~ 166 (185)
T 2p2o_A 149 VTIGDNAVIASGAVVTKD 166 (185)
T ss_dssp CEECTTCEECTTCEECSC
T ss_pred CEECCCCEECCCCEECCC
Confidence 999999999999999986
No 165
>3hjj_A Maltose O-acetyltransferase; LEFT-handed beta-helix, acyltransferase, struct genomics; 2.15A {Bacillus anthracis} SCOP: b.81.1.0 PDB: 3igj_A*
Probab=99.03 E-value=1.8e-10 Score=130.31 Aligned_cols=108 Identities=18% Similarity=0.246 Sum_probs=85.9
Q ss_pred HhhhcC-CcchHHHHHHHhcCeeeccCcEEEccceeeecCceeEEecCceEECCCceEee--ecccC---CCcceEeeeE
Q 037878 2166 FVEMTS-GSFLFVAWMKLMGAEIELGQGAYVDSMGAVLNPEMVEMEGNGGCVGKEALLFG--HIYEG---DGGKVKFGKI 2239 (2280)
Q Consensus 2166 ~~~~~~-~~~~~~~~~r~~g~~ig~~~~~~~~~~~~~~~~~~v~~g~~~~~~~~~~~~~~--h~~~~---~~~~~~~~~~ 2239 (2280)
|.+... ++.+...+...+|.++-+|++++|+.++.+.+...|+|| |+|.|+++|.|.+ |.... ..+....+++
T Consensus 57 ~~~~~~~~~~I~~~~~~~~g~~v~IG~~~~I~~~~~i~~~~~v~IG-~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~v 135 (190)
T 3hjj_A 57 LGSSADGKAQINPDFRCDYGYNIHVGKSFFANFNCVILDVCEVRIG-DHCMFAPGVHIYTATHPLHPVERNSGKEYGKPV 135 (190)
T ss_dssp SSEESSSCCEECSSCEESSSTTEEECTTCEECTTCEEECSSCEEEC-TTCEECTTCEEECEECCSSHHHHTSSEEEECCE
T ss_pred hhhcCCCCcEECCCEEEEeCCceEECCceeeCCCeEEEeCCCeEEC-CceEEcCCcEEecCCccCchhhccccccccCCe
Confidence 334444 455555544445544445599999999899888899999 9999999999988 44332 2455667899
Q ss_pred EEccCeEEccceeEcCCcEeCCCceecccceeecc
Q 037878 2240 RIGEGGFVGSRAAAMPGVRIENGGSLSSLSLAMKE 2274 (2280)
Q Consensus 2240 ~~~~~~~~g~~~~~~~g~~~~~~~~~~~~s~~~~~ 2274 (2280)
+||++||||++|+|+||++||++++||++|+|+|.
T Consensus 136 ~IG~~v~IG~~~~I~~gv~IG~~~vIgagsvV~~d 170 (190)
T 3hjj_A 136 KIGNNVWVGGGAIINPGVSIGDNAVIASGAVVTKD 170 (190)
T ss_dssp EECTTCEECTTCEECTTCEECTTCEECTTCEECSC
T ss_pred EECCCCEECCCCEECCCCEECCCCEECCCCEECcc
Confidence 99999999999999999999999999999999985
No 166
>2v0h_A Bifunctional protein GLMU; cell WALL, magnesium, cell shape, transferase, peptidoglycan synthesis, associative mechanism; 1.79A {Haemophilus influenzae} PDB: 2v0i_A* 2v0j_A* 2v0k_A* 2v0l_A* 2vd4_A* 2w0v_A* 2w0w_A* 3twd_A*
Probab=99.02 E-value=2.8e-10 Score=148.63 Aligned_cols=51 Identities=18% Similarity=0.289 Sum_probs=45.9
Q ss_pred eCeEECCCcEEccCCeeCC-------CcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1621 GKVEVQDNSVIGSQSLVLP-------NSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~~-------g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
+.++||++|+||.++++.. +++||+||.||++++|.++-.|++++++.+.-
T Consensus 368 ~~~~Ig~~v~Ig~~~~i~~~~~~~~~~v~Ig~~~~Ig~~~~i~~~v~Ig~~~~ig~~s 425 (456)
T 2v0h_A 368 GDSEIGSNCNIGAGVITCNYDGANKFKTIIGDDVFVGSDTQLVAPVKVANGATIGAGT 425 (456)
T ss_dssp ESEEECTTCEECTTCEEEECSSSSCCCEEECSSCEECTTCEEEESEEECTTCEECTTC
T ss_pred cCcEECCCcEECCceEEeccccccCCCcEECCCCEECCCCEEcCCcEECCCCEECCCC
Confidence 6789999999999999987 89999999999999999887788988886653
No 167
>1v3w_A Ferripyochelin binding protein; beta-helix, carbonic anhydrase, structural genomics, riken S genomics/proteomics initiative, RSGI, lyase; 1.50A {Pyrococcus horikoshii} SCOP: b.81.1.5 PDB: 1v67_A 2fko_A
Probab=99.02 E-value=7.8e-10 Score=123.24 Aligned_cols=70 Identities=24% Similarity=0.360 Sum_probs=57.3
Q ss_pred eeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE-ccCc
Q 037878 1575 KIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL-GALS 1653 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v-g~~s 1653 (2280)
.||+++.|+..+.+. .+.||++|+|+.++.|. +.++||++|+||++++|.+|..|++++++ |..+
T Consensus 73 ~Ig~~~~I~~~~~i~---~~~Ig~~~~Ig~~~~i~-----------~~~~Ig~~~~Ig~~s~V~~~~~i~~~~~v~G~pa 138 (173)
T 1v3w_A 73 EIGEYVTIGHNAMVH---GAKVGNYVIIGISSVIL-----------DGAKIGDHVIIGAGAVVPPNKEIPDYSLVLGVPG 138 (173)
T ss_dssp EECSSCEECTTCEEE---SCEECSSEEECTTCEEC-----------TTCEECSSEEECTTCEECTTCEECTTEEEEETTE
T ss_pred EECCCCEECCCCEEC---CCEECCCCEECCCCEEe-----------CCCEECCCCEECCCCEECCCcEeCCCcEEECcCC
Confidence 466666666554442 37899999999999885 56899999999999999999999999999 7777
Q ss_pred cccCC
Q 037878 1654 VAPMH 1658 (2280)
Q Consensus 1654 ~v~~~ 1658 (2280)
.+.++
T Consensus 139 ~~~~~ 143 (173)
T 1v3w_A 139 KVVRQ 143 (173)
T ss_dssp EEEEE
T ss_pred EEecc
Confidence 77766
No 168
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=99.01 E-value=7e-10 Score=134.72 Aligned_cols=51 Identities=14% Similarity=0.229 Sum_probs=42.9
Q ss_pred eCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccC--C--CccCCCcEEecCC
Q 037878 1621 GKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPM--H--SVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~--~--~~v~~~~~~~G~P 1671 (2280)
++++||+++.||.++.|.++++||++++|+++|.|.. + ..++.+.++.|.|
T Consensus 261 g~~~i~~~~vIGg~a~I~g~v~Ig~~~~I~~~s~v~~~~g~~~~~~g~~~~~g~~ 315 (334)
T 2pig_A 261 GPILLDDRVLIEGHACIQGEILIERQVEISGRAAVIAFDDNTIHLRGPKVINGED 315 (334)
T ss_dssp SCEEEESSEEECTTCEEESSEEEESSEEECTTCEEECCTTCCEEEESSEEECTTC
T ss_pred CCeEECCeEEEcCCcEECcCcEECCCcEECCCcEEEEecCCcccccCCcEEcCce
Confidence 4789999999999999999999999999999999862 1 1255667788887
No 169
>2jgp_A Tyrocidine synthetase 3; multifunctional enzyme, antibiotic biosynthesis, condensatio domain, peptide bond formation, ligase; 1.85A {Brevibacillus brevis}
Probab=99.00 E-value=3.4e-10 Score=150.53 Aligned_cols=107 Identities=18% Similarity=0.209 Sum_probs=86.0
Q ss_pred CChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhc
Q 037878 1077 MSNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMK 1156 (2280)
Q Consensus 1077 ~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~ 1156 (2280)
.|.+++|+.|+++|+++||++ +|+.+||||+||||||.||++++++++.+|+.+++.+||++||+++||+.++.....
T Consensus 6 ~p~~~~e~~l~~iw~~vL~~~--~i~~~d~ff~lGgdSl~a~~l~~~~~~~~g~~l~~~~i~~~~ti~~la~~~~~~~~~ 83 (520)
T 2jgp_A 6 APRSVWEARLAQVWEQVLNVP--QVGALDDFFALGGHSLRAMRVLSSMHNEYQVDIPLRILFEKPTIQELAAFIEETAKG 83 (520)
T ss_dssp CCCSHHHHHHHHHHHHHHTCS--CCCTTCBTTTTTCCHHHHHHHHHHHHHHHCBCCCHHHHHHSCBHHHHHHHHHHCCTT
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCccHHHhcccHHHHHHHHHHHHHHhCCCcCHHHHhcCCCHHHHHHHHHhhccc
Confidence 456889999999999999997 899999999999999999999999999999999999999999999999999764321
Q ss_pred cCCCCCCCCCCCCCCCCCCcchhhhhhhhhhhHHHHHHHH
Q 037878 1157 SQPQLMTDSSFTPEPETDFDEFDMEVSKARQCGIWIFQLL 1196 (2280)
Q Consensus 1157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~q~~~~~~~~l 1196 (2280)
... ...+. ......|++..|.++|++++.
T Consensus 84 ~~~------~~~~~-----~~~~~~pls~~Q~~~~~~~~~ 112 (520)
T 2jgp_A 84 NVF------SIEPV-----QKQAYYPVSSAQKRMYILDQF 112 (520)
T ss_dssp BTT------CCCCC-----CCCSSEECCHHHHHHHHHHHH
T ss_pred ccC------CCCCC-----CCCCCCCCCHHHHHHHHHHhc
Confidence 111 01111 112235678889999877654
No 170
>1qre_A Carbonic anhydrase; beta-helix, lyase; 1.46A {Methanosarcina thermophila} SCOP: b.81.1.5 PDB: 1qq0_A 1qrf_A 1qrg_A 1qrm_A 1qrl_A 1thj_A 3otm_A 3ow5_A 3ou9_A 3otz_A 3oup_A
Probab=99.00 E-value=9.3e-10 Score=130.03 Aligned_cols=60 Identities=22% Similarity=0.231 Sum_probs=42.0
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCC
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGS 1384 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~ 1384 (2280)
..+|++++.|++.... .+.++||++|.|+++|.|.+... .+|+||++|.||++++|.++.
T Consensus 59 ~~~I~~~~~I~~~a~I-~g~v~IG~~~~I~~~~~I~~~~~-------~~i~IG~~~~Ig~~~~I~~~~ 118 (247)
T 1qre_A 59 APVIDPTAYIDPQASV-IGEVTIGANVMVSPMASIRSDEG-------MPIFVGDRSNVQDGVVLHALE 118 (247)
T ss_dssp CCEECTTCEECTTCEE-EESEEECTTCEECTTCEEEESSS-------CCEEECTTCEECTTCEEEECC
T ss_pred CcEECCCcEECCCCEE-eCCcEECCCCEECCCcEEecCCC-------CCEEECCCCEECCCeEEEecc
Confidence 3678888888754331 25688999999999988875531 356777777777777776543
No 171
>2kr5_A PKS, aflatoxin biosynthesis polyketide synthase; acyl carrrier protein, holo, phosphopantetheine, transport protein; HET: PNS; NMR {Aspergillus parasiticus}
Probab=99.00 E-value=6.7e-10 Score=108.83 Aligned_cols=75 Identities=20% Similarity=0.401 Sum_probs=71.2
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCc--ccccCcccHHHHHHHHHh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGA--VDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~--~di~~~pti~~LA~~l~~ 1152 (2280)
+.+++++.++++|+++||++++.|+.+++||++|+|||.+++++.++++.+|++++. .++|++||+++|++++.+
T Consensus 8 ~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSL~~~~l~~~l~~~~g~~l~~~~~~l~~~~Tv~~la~~l~~ 84 (89)
T 2kr5_A 8 VSNEKLDAVMRVVSEESGIALEELTDDSNFADMGIDSLSSMVIGSRFREDLGLDLGPEFSLFIDCTTVRALKDFMLG 84 (89)
T ss_dssp CCHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHTCCHHHHHHHHHHHHHTTCCCCCSSCCTTTSCCBHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHCcCHHHCCCCCCHHHcCccHHHHHHHHHHHHHHHCCCCCchHHHHHcCCCHHHHHHHHHH
Confidence 457889999999999999988899999999999999999999999999999999999 999999999999999975
No 172
>4fce_A Bifunctional protein GLMU; GLMU. csgid, niaid, structural genomics, national institute allergy and infectious diseases; HET: GP1; 1.96A {Yersinia pseudotuberculosis} PDB: 3fww_A 1hv9_A* 2oi5_A* 2oi6_A* 2oi7_A* 1fxj_A* 1fwy_A*
Probab=98.99 E-value=1.5e-09 Score=141.85 Aligned_cols=65 Identities=20% Similarity=0.366 Sum_probs=54.9
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCCCcEEccCccccCCCccCCCcE
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSRDVILGALSVAPMHSVLQRGGI 1666 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~~~~vg~~s~v~~~~~v~~~~~ 1666 (2280)
+.||+++.+++.+.+ +.+.||++|+||+++++.. +++||++|+||++++|.++-.|.+|++
T Consensus 356 ~~i~~~~~i~~~~~i------------~~~~Ig~~~~ig~~~~i~~~~~~~~~~v~Ig~~~~IG~~~~I~~gv~Ig~~~~ 423 (459)
T 4fce_A 356 ARLGKGSKAGHLSYL------------GDAEIGAGVNIGAGTITCNYDGANKFKTIIGDDVFVGSDTQLVAPVTVANGAT 423 (459)
T ss_dssp EEECTTCEEEEEEEE------------EEEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSEEECTTCE
T ss_pred eEEcCCCEECCceEE------------CCeEECCCCEECCCCEEeccccccCCCCEECCCeEEcCCCEEcCCcEECCCCE
Confidence 567777777666666 6689999999999999976 799999999999999999988899888
Q ss_pred EecC
Q 037878 1667 YIGS 1670 (2280)
Q Consensus 1667 ~~G~ 1670 (2280)
..+.
T Consensus 424 igag 427 (459)
T 4fce_A 424 IGAG 427 (459)
T ss_dssp ECTT
T ss_pred ECCC
Confidence 8554
No 173
>1xhd_A Putative acetyltransferase/acyltransferase; structural genomics, protein structure initiative, medwest C structural genomics, MCSG; 1.90A {Bacillus cereus} SCOP: b.81.1.5 PDB: 3vnp_A 2eg0_A
Probab=98.99 E-value=1.4e-09 Score=121.11 Aligned_cols=70 Identities=14% Similarity=0.161 Sum_probs=57.1
Q ss_pred eeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE-ccCc
Q 037878 1575 KIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL-GALS 1653 (2280)
Q Consensus 1575 ~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v-g~~s 1653 (2280)
.||++|.|+..+.+. .+.|||+|+|+.++.|. +.++||++|+||++++|.++..|++++++ |..+
T Consensus 75 ~Ig~~~~Ig~~~~i~---~~~Ig~~~~Ig~~~~i~-----------~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~pa 140 (173)
T 1xhd_A 75 ILEDDVTVGHQVILH---SCHIKKDALIGMGSIIL-----------DGAEIGEGAFIGAGSLVSQGKKIPPNTLAFGRPA 140 (173)
T ss_dssp EECTTCEECTTCEEE---SCEECTTCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCEECTTEEEEETTE
T ss_pred EECCCCEECCCCEEe---CCEECCCCEEcCCCEEc-----------CCCEECCCCEECCCCEECCCcEeCCCCEEECCCC
Confidence 466666666554333 27899999999999884 56899999999999999999999999999 7667
Q ss_pred cccCC
Q 037878 1654 VAPMH 1658 (2280)
Q Consensus 1654 ~v~~~ 1658 (2280)
.+.++
T Consensus 141 ~~~~~ 145 (173)
T 1xhd_A 141 KVIRE 145 (173)
T ss_dssp EEEEE
T ss_pred EECCC
Confidence 77766
No 174
>3tv0_A Dynactin subunit 6; LEFT-handed beta-helix, ARP11, cytosol, structural; 2.15A {Homo sapiens}
Probab=98.98 E-value=2.1e-09 Score=122.21 Aligned_cols=72 Identities=10% Similarity=0.054 Sum_probs=61.2
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGAL 1652 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~ 1652 (2280)
++.||+++.|+..+.+. .++||++|+|+.++.|. ..++||++|+||++++|.++++|+++++|+..
T Consensus 85 ~~~Ig~~~~i~~~~~i~---~~~Ig~~~~Ig~~~~I~-----------~gv~IG~~~~IgagsvV~~~~~Ip~~svv~G~ 150 (194)
T 3tv0_A 85 PMIIGTNNVFEVGCYSQ---AMKMGDNNVIESKAYVG-----------RNVILTSGCIIGACCNLNTFEVIPENTVIYGA 150 (194)
T ss_dssp CEEECSSCEECTTCEEC---CSEECSSCEECTTCEEC-----------TTEEECSSCEECTTCEECCCEEECTTEEEEST
T ss_pred ceEECCcceEecceeEe---eeeecccceecceeeEC-----------CeEEECCCCEECCCCEECCCcEECCCCEEECC
Confidence 36799999998765444 38999999999999995 67899999999999999999999999999877
Q ss_pred ccccCC
Q 037878 1653 SVAPMH 1658 (2280)
Q Consensus 1653 s~v~~~ 1658 (2280)
....+.
T Consensus 151 pa~~~~ 156 (194)
T 3tv0_A 151 DCLRRV 156 (194)
T ss_dssp TCCEEE
T ss_pred CcEEee
Confidence 765443
No 175
>3mc4_A WW/RSP5/WWP domain:bacterial transferase hexapept repeat:serine O-acetyltransferase...; ssgcid, structural genomics; 1.95A {Brucella melitensis biovar abortus}
Probab=98.98 E-value=1.6e-09 Score=127.26 Aligned_cols=102 Identities=16% Similarity=0.168 Sum_probs=69.6
Q ss_pred HHHcCCEECCCcEECccccCC-CCceEECCCCEeCCCCEEeeccccCCc---eeecCEEECCCcEECCCCEECCCCEECC
Q 037878 1313 FEMLGAKLGSSVLLDTVDITD-PSLVLIGDGAVISEGALIQSHEVKNGV---LSFQPIKIARKVSVGPYAVIQKGSVIGE 1388 (2280)
Q Consensus 1313 ~R~lGa~Ig~~v~i~~~~~~~-~~~~~IG~~~~I~~~~~l~~~~~~~~~---~~~~~i~Ig~~~~iG~~~~i~pg~~ig~ 1388 (2280)
....|+.||+++.|+.....+ ...+.||++|.||++|.|......++. -..++++||+||+||++|+|.+|++||+
T Consensus 160 ~~~~gi~I~p~a~IG~~v~I~hg~gvvIG~~~~IGd~v~I~~gvtIg~~~~~~~~r~~~IGd~v~IGaga~Il~gv~IG~ 239 (287)
T 3mc4_A 160 SSIFQTDIHPAARLGSGLFLDHATGLVVGETAVVEDNVSILHGVTLGGTGKSSGDRHPKIRQGVLIGAGAKILGNIQVGQ 239 (287)
T ss_dssp HHHTCCEECTTCEECSSCEEESCTTCEECTTCEECSSCEEETTCEEEC-----CCCSCEECTTCEECTTCEEESSCEECT
T ss_pred eeccCeEECCCCEECCCeEEccCCCeEECCCeEECCCCEEcCCCEEcCCcccCCCcCCEECCCCEECCCCEECCCcEECC
Confidence 344576666666665432211 234555665555555555433322111 1124689999999999999999999999
Q ss_pred CCEECcCCcc----CCCCccccCCCceeecc
Q 037878 1389 EAEVAPLQKS----EGGKPILKSTNANYVQK 1415 (2280)
Q Consensus 1389 ~a~ig~~s~v----~~~~~~~~g~p~~~~~~ 1415 (2280)
||+||++|+| ++++.+ .|+|++....
T Consensus 240 ~a~IGagsvV~kdVp~~svv-vG~PAkii~~ 269 (287)
T 3mc4_A 240 CSKIAAGSVVLKSVPHNVTV-AGVPARIIGE 269 (287)
T ss_dssp TCEECTTCEECSCBCTTEEE-ETTTTEEEEE
T ss_pred CCEECCCCEEccccCCCCEE-EccCCEEeCc
Confidence 9999999988 677777 8999998743
No 176
>2ju1_A Erythronolide synthase; carrier protein domain, modular polyketide synthase, alpha- helical bundle, acyltransferase; NMR {Saccharopolyspora erythraea} PDB: 2ju2_A
Probab=98.97 E-value=5.9e-10 Score=110.76 Aligned_cols=75 Identities=20% Similarity=0.288 Sum_probs=69.8
Q ss_pred hhHHHHHHHHHHHHHhC-CCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1079 NKDIVEFLKGLVSEQTG-IPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg-~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.+.+++.++++|+++|| .+++.|+.+++||++|+|||.++++.+.+++.+|++++..++|++||+++|++++.+.
T Consensus 18 ~~~~~~~l~~~~~~~l~~~~~~~i~~~~~f~~lG~DSL~a~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~ 93 (95)
T 2ju1_A 18 TAELVRLVRTSTATVLGHDDPKAVRATTPFKELGFDSLAAVRLRNLLNAATGLRLPSTLVFDHPNASAVAGFLDAE 93 (95)
T ss_dssp HHHHHHHHHHHHHHHTTCCCGGGCCSSSCHHHHTCSSHHHHHHHHHHGGGTSSCCCTTHHHHCSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCChhhCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCChhHHhcCCCHHHHHHHHHHH
Confidence 46678999999999999 6777899999999999999999999999999999999999999999999999998753
No 177
>3ixc_A Hexapeptide transferase family protein; niaid, ssgcid, seattle structural genomics center for infect disease, GRAM-negative bacteria; 1.61A {Anaplasma phagocytophilum}
Probab=98.97 E-value=2.1e-09 Score=121.85 Aligned_cols=71 Identities=18% Similarity=0.278 Sum_probs=54.7
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEE-ccC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVIL-GAL 1652 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~v-g~~ 1652 (2280)
+.||++|.|+.++.+.. ++||++|+|+.++.|. ..++||++|+||++++|.+|..|++++++ |..
T Consensus 96 ~~Ig~~~~Ig~~~~i~~---~~Ig~~~~Ig~~~~I~-----------~~~~Ig~~~~Ig~gsvV~~~~~i~~~~~v~G~p 161 (191)
T 3ixc_A 96 TVIGKFVTIGHSCILHA---CTLGNNAFVGMGSIVM-----------DRAVMEEGSMLAAGSLLTRGKIVKSGELWAGRP 161 (191)
T ss_dssp EEECTTCEECTTCEECS---CEECTTCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCEECTTEEEEETT
T ss_pred eEECCCCEECCCCEEEC---CEECCCCEECCCCEEe-----------CCeEECCCCEECCCCEECCCcCcCCCeEEECcC
Confidence 35666666666543332 7899999999999885 45799999999999999999999999985 444
Q ss_pred ccccCC
Q 037878 1653 SVAPMH 1658 (2280)
Q Consensus 1653 s~v~~~ 1658 (2280)
+.+.++
T Consensus 162 a~~i~~ 167 (191)
T 3ixc_A 162 AKFLRM 167 (191)
T ss_dssp EEEEEE
T ss_pred ceeccc
Confidence 444444
No 178
>3r1w_A Carbonic anhydrase; beta-helix, lyase; 1.73A {Unidentified}
Probab=98.92 E-value=5.1e-09 Score=118.73 Aligned_cols=63 Identities=22% Similarity=0.278 Sum_probs=55.4
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG 1650 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg 1650 (2280)
+.||++|.|+..+.+.. ++||++|+|+.++.|. +.++||++|+||++++|.+|..|+++++++
T Consensus 88 ~~Ig~~~~Ig~~~~i~~---~~Ig~~~~Ig~~~~i~-----------~~v~Ig~~~~Ig~~s~V~~g~~i~~~~vv~ 150 (189)
T 3r1w_A 88 LIIGDDVTIGHQAMLHG---CTIGNRVLIGMKSMIM-----------DGAIVEDEVIVAAGATVSPGKVLESGFVYM 150 (189)
T ss_dssp EEECSSEEECTTCEEES---CEECSSEEECTTCEEC-----------TTCEECSSCEECTTCEECTTCEECTTEEEE
T ss_pred eEECCCCEECCCCEEeC---cEECCCcEECCCCEEc-----------CCCEECCCCEEccCCEECCCCEeCCCCEEE
Confidence 57999999988765543 8999999999999985 678999999999999999999999999984
No 179
>1hm9_A GLMU, UDP-N-acetylglucosamine-1-phosphate uridyltransfe; acetyltransferase, bifunctional, drug design; HET: ACO UD1; 1.75A {Streptococcus pneumoniae} SCOP: b.81.1.4 c.68.1.5 PDB: 1hm8_A* 1hm0_A* 4ac3_A* 4aaw_A* 1g97_A* 1g95_A*
Probab=98.92 E-value=5.5e-09 Score=136.72 Aligned_cols=64 Identities=20% Similarity=0.351 Sum_probs=52.4
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCCCcEEccCccccCCCccCCCcE
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSRDVILGALSVAPMHSVLQRGGI 1666 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~~~~vg~~s~v~~~~~v~~~~~ 1666 (2280)
+.||+++.|++.+.+ +.+.||++|+||.++++.. +++||++|.||++++|..+-.|.+|++
T Consensus 361 ~~Ig~~~~i~~~~~i------------~~~~Ig~~~~Ig~~~~i~~~~~~~~~~~~Ig~~~~Ig~~~~i~~~v~Ig~~~~ 428 (468)
T 1hm9_A 361 SSIGENTKAGHLTYI------------GNCEVGSNVNFGAGTITVNYDGKNKYKTVIGDNVFVGSNSTIIAPVELGDNSL 428 (468)
T ss_dssp CEECTTCEEEEEEEE------------ESEEECTTCEECTTCEEECBCSSCBCCEEECTTCEECTTCEEESSCEECTTCE
T ss_pred eEEcCCcEeCCceEE------------ccccccCCcEECCCcEEecCcCccCCCcEECCCeEECCCCEEeCCcEECCCCE
Confidence 566777666666555 6789999999999999977 799999999999999988877888888
Q ss_pred Eec
Q 037878 1667 YIG 1669 (2280)
Q Consensus 1667 ~~G 1669 (2280)
+.+
T Consensus 429 i~~ 431 (468)
T 1hm9_A 429 VGA 431 (468)
T ss_dssp ECT
T ss_pred ECC
Confidence 644
No 180
>3mqg_A Lipopolysaccharides biosynthesis acetyltransferas; beta helix, acetyl transferase, transferase; HET: ACO U5P UDP PE4; 1.43A {Bordetella petrii} PDB: 3mqh_A*
Probab=98.91 E-value=3.4e-09 Score=120.41 Aligned_cols=96 Identities=16% Similarity=0.148 Sum_probs=75.3
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceee----------------------cCEEECCCcEE
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSF----------------------QPIKIARKVSV 1374 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~----------------------~~i~Ig~~~~i 1374 (2280)
+++||+++.|+..... ...++||++|.|++++.|.++...++...+ ++++||++|+|
T Consensus 33 ~~~IG~~~~Ig~~~~I-~~~~~IG~~~~I~~~~~I~~~~~Ig~~~~ig~~~~~~~~~~~~~~~~~~~~~~~~~Ig~~v~I 111 (192)
T 3mqg_A 33 GAEIGEGCSLGQNVFV-GNRVRIGNRVKIQNNVSVYDNVFLEDDVFCGPSMVFTNVYNPRAAIERKSEYRDTIVRQGATL 111 (192)
T ss_dssp TCEECTTCEECTTCEE-CSSCEECSSCEECTTCEECTTEEECTTCEECTTCBCCSCSSCBTTBCCGGGCCCEEECTTCEE
T ss_pred CcEECCCCEECCCEEE-CCceEECCCcEEcCCcEEeCCCEECCCCEECCceEEecccCCccccccccccCCcEECCCcEE
Confidence 5778888888654432 244778888888888887655544433332 67999999999
Q ss_pred CCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1375 GPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1375 G~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
|++++|.+|++||++++||++|+| ++++.+ .|+||+...
T Consensus 112 G~~~~I~~g~~Ig~~~~IgagsvV~~~vp~~~v~-~G~PAk~i~ 154 (192)
T 3mqg_A 112 GANCTVVCGATIGRYAFVGAGAVVNKDVPDFALV-VGVPARQIG 154 (192)
T ss_dssp CTTCEECTTCEECTTCEECTTCEECSCBCTTEEE-ETTTTEEEE
T ss_pred CCCCEECCCCEECCCCEEcCCCEECcccCCCCEE-EccCCEEEE
Confidence 999999999999999999999998 677777 899999864
No 181
>2liu_A CURA; holo state, transferase; NMR {Lyngbya majuscula} PDB: 2liw_A*
Probab=98.91 E-value=2.1e-09 Score=107.73 Aligned_cols=77 Identities=16% Similarity=0.287 Sum_probs=72.5
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
..++++++++++|+++|+++.+.|+.+++||++|+|||.++++...+++.+|+.++..++|++||+++|++++.+..
T Consensus 18 ~~~~~~~~l~~~~~~~l~~~~~~i~~~~~~~~lG~DSl~~~~l~~~l~~~~g~~l~~~~l~~~~ti~~la~~l~~~~ 94 (99)
T 2liu_A 18 NLSEIKQVLKQQLAEALYTEESEIAEDQKFVDLGLDSIVGVEWTTTINQTYNLNLKATKLYDYPTLLELSGYIAQIL 94 (99)
T ss_dssp CHHHHHHHHHHHHHHHTTSCGGGCCSSSCHHHHTCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCSHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCccHHHHHHHHHHHHHHHCCCcCHHHHHhCCCHHHHHHHHHHHh
Confidence 56788999999999999998889999999999999999999999999999999999999999999999999987654
No 182
>3eev_A Chloramphenicol acetyltransferase; beta-helix, structural genomics, center for STR genomics of infectious diseases, csgid; 2.61A {Vibrio cholerae o1 biovar el tor} SCOP: b.81.1.3
Probab=98.90 E-value=2.9e-09 Score=122.64 Aligned_cols=97 Identities=22% Similarity=0.228 Sum_probs=77.0
Q ss_pred CCEECCCcEECccc---------------cCCCCceEECCCCEeCCCCEEee-----cccc-------------------
Q 037878 1317 GAKLGSSVLLDTVD---------------ITDPSLVLIGDGAVISEGALIQS-----HEVK------------------- 1357 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~---------------~~~~~~~~IG~~~~I~~~~~l~~-----~~~~------------------- 1357 (2280)
++.||+++.|+... ....+.++||++|.|+++|.|.. |..+
T Consensus 24 ~v~IG~~t~I~~~~~~~~~~~~~~~i~~~~~i~~~v~IG~~~~I~~~v~i~~~~~~~h~~~~v~~~~~~~~~~~~~~~~~ 103 (212)
T 3eev_A 24 NIIVGKHSYYSGYYHGHSFDDCVRYLHPERDDVDKLVIGSFCSIGSGAVFMMAGNQGHRSDWISTFPFFYQDNDNFADAR 103 (212)
T ss_dssp TEEECSSCEECCGGGCSCGGGGEETCCSSCSSSCCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGSCCGGGTTCC
T ss_pred CeEECCCeEEccccCccccccceeEECCCccccCCcEECCCCEECCCCEEEeCCCCcccccceeeccceeeccccccccc
Confidence 78899999986211 01225789999999999998832 3322
Q ss_pred CCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1358 NGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1358 ~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
.+....++++||++|+||++|+|.+|++||+||+||++|+| ++++.+ .|+||+...
T Consensus 104 ~~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~~~iIgagsvV~~dVp~~~vv-~G~PAk~i~ 163 (212)
T 3eev_A 104 DGFTRSGDTIIGHDVWIGTEAMIMPGVKIGHGAIIASRSVVTKDVAPYEVV-GSNPAKHIK 163 (212)
T ss_dssp CCCCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEE-ETTTTEEEE
T ss_pred CCcccCCCeEECCCCEECCCCEEcCCCEECCCCEECCCCEEccccCCCcEE-EecCCEEEe
Confidence 22234578999999999999999999999999999999998 778877 899999763
No 183
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.89 E-value=3e-09 Score=135.21 Aligned_cols=71 Identities=11% Similarity=0.025 Sum_probs=56.1
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeC--CCcEeCCCcEEccCccccCCCccCCCcEEecCC
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVL--PNSVVSRDVILGALSVAPMHSVLQRGGIYIGSQ 1671 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~--~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G~P 1671 (2280)
++||++|+||++|.|.... ..+++||++|+||++++|. +|..|+++++++ ++ +.....++.++.+.|.|
T Consensus 343 v~IGd~v~IG~~a~I~~~~-------~~~v~IG~~a~IGagsvV~~~~~~~I~~~s~v~-G~-v~~~~~l~~~~~~~~~~ 413 (496)
T 3c8v_A 343 AHLGDMIFTGFNSFLQGSE-------SSPLKIGDGCVVMPHTIIDLEEPLEIPAGHLVW-GY-IRNKADLAAHSISFEEF 413 (496)
T ss_dssp EEEEETCEECTTCEEECCS-------SSCEEECTTCEECTTCEEECSSCEEECSSEEEC-SE-ESSHHHHHHSEEEHHHH
T ss_pred ceECCCcEECCCCEEeCCC-------CcceEECCCCEECCCCEEecCCCcEeCCCCEEE-EE-eccCccccccccccccH
Confidence 7888889998888884221 1348999999999999999 999999999998 55 44443478889999999
Q ss_pred Cc
Q 037878 1672 SP 1673 (2280)
Q Consensus 1672 a~ 1673 (2280)
+.
T Consensus 414 ~~ 415 (496)
T 3c8v_A 414 AK 415 (496)
T ss_dssp TT
T ss_pred HH
Confidence 63
No 184
>1t3d_A SAT, serine acetyltransferase; LEFT-handed-beta-helix, dimer of trimers; 2.20A {Escherichia coli} SCOP: b.81.1.6
Probab=98.89 E-value=3.3e-09 Score=124.91 Aligned_cols=94 Identities=19% Similarity=0.191 Sum_probs=65.5
Q ss_pred CCEECCCcEECc-cccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcC
Q 037878 1317 GAKLGSSVLLDT-VDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPL 1395 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~-~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~ 1395 (2280)
+|+||+++.|+. ..+.....++||+||.|+++|.|++..... ..++++||++|+||++|+|.+|++||+||+||++
T Consensus 163 ~a~IG~gv~I~~g~gvvIG~~~~IG~~v~I~~gvtLg~~~~~~---~~~~~~IGd~v~IGaga~Ilggv~IG~~a~IGag 239 (289)
T 1t3d_A 163 AAKIGRGIMLDHATGIVVGETAVIENDVSILQSVTLGGTGKSG---GDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAG 239 (289)
T ss_dssp TCEECSSCEECSCTTCEECTTCEECSSCEECTTCEEECCSSSC---SSCSCEECTTCEECTTCEEESSCEECTTCEECTT
T ss_pred CCEEcCCEEECCCCceEECCCcEECCCCEEcCCcEECCCcccc---CCCCeEECCCeEECCCCEEecCcEECCCCEECCC
Confidence 456666666642 111122344555555555555555432211 1356899999999999999999999999999999
Q ss_pred Ccc----CCCCccccCCCceeec
Q 037878 1396 QKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1396 s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
|+| ++++.+ .|+|++...
T Consensus 240 svV~~dVp~~s~v-~G~PAr~i~ 261 (289)
T 1t3d_A 240 SVVLQPVPPHTTA-AGVPARIVG 261 (289)
T ss_dssp CEECSCBCTTCEE-ETTTTEEEE
T ss_pred CEEccCCCCCCEE-EecCCEEeC
Confidence 988 778887 899999764
No 185
>1ssq_A SAT, serine acetyltransferase; LEFT-handed parallel beta helix; 1.85A {Haemophilus influenzae} SCOP: b.81.1.6 PDB: 1sst_A* 1s80_A 1ssm_A 3gvd_A*
Probab=98.88 E-value=3.3e-09 Score=124.08 Aligned_cols=94 Identities=18% Similarity=0.202 Sum_probs=67.5
Q ss_pred CCEECCCcEECc-cccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcC
Q 037878 1317 GAKLGSSVLLDT-VDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPL 1395 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~-~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~ 1395 (2280)
+|+||+++.|+. ..+.....++||++|.|+++|+|++..... ..++++||++|+||++|+|.+|++||+||+||++
T Consensus 143 ~a~IG~g~~I~~~~~vvIG~~~~IG~~v~I~~gvtig~~~~~~---~~~~~~IGd~v~IGaga~Il~gv~IG~~a~IGag 219 (267)
T 1ssq_A 143 AAKIGHGIMFDHATGIVVGETSVIENDVSILQGVTLGGTGKES---GDRHPKVREGVMIGAGAKILGNIEVGKYAKIGAN 219 (267)
T ss_dssp TCEECSSCEESSCTTCEECTTCEECTTCEECTTCEEECCSSSC---SSCSCEECTTCEECTTCEEESSCEECTTCEECTT
T ss_pred CCEECCCEEECCCCceEECCeeEECCCCEEcCCcEECCCcccC---CCCCeEECCCeEEcCCCEEeCCcEECCCCEECCC
Confidence 466666666642 111122345566666666666665543221 1356899999999999999999999999999999
Q ss_pred Ccc----CCCCccccCCCceeec
Q 037878 1396 QKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1396 s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
|+| ++++.+ .|+|++...
T Consensus 220 svV~~dVp~~~~v-~G~PAr~i~ 241 (267)
T 1ssq_A 220 SVVLNPVPEYATA-AGVPARIVS 241 (267)
T ss_dssp CEECSCBCTTCEE-ETTTTEECC
T ss_pred CEEccCCCCCCEE-EecCcEEec
Confidence 988 778887 799999764
No 186
>3gos_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; 2,3,4,5-tetrahydropyridine-2-carboxylate N-succinyltransfera acyltransferase; 1.80A {Yersinia pestis} SCOP: b.81.1.2 PDB: 1kgq_A* 1kgt_A* 2tdt_A* 3tdt_A* 3bxy_A 1tdt_A
Probab=98.87 E-value=1.5e-08 Score=120.99 Aligned_cols=76 Identities=18% Similarity=0.153 Sum_probs=53.8
Q ss_pred ceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCc-------EEccCcccc-CCCccCCC
Q 037878 1593 QVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDV-------ILGALSVAP-MHSVLQRG 1664 (2280)
Q Consensus 1593 ~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~-------~vg~~s~v~-~~~~v~~~ 1664 (2280)
.++|||+|+||.+|.|. ..++||++|+||++++|.++++|++++ .|.++|+|. .+-+.|.|
T Consensus 177 ~v~IGd~v~IG~~a~I~-----------~gv~IG~~avIgagsvV~~~~~I~~~~~~~~~~g~Vp~~svvv~G~~P~~~g 245 (276)
T 3gos_A 177 PTIIEDNCFVGARSEVV-----------EGVIVEEGSVISMGVFIGQSTRIYDRETGEVHYGRVPAGSVVVSGNLPSKDG 245 (276)
T ss_dssp CCEECTTCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEEEEEEEECTTS
T ss_pred CeEECCCCEECCCCEEC-----------CCCEECCCCEECCCCEECCCcEEccccccceeccccCCCcEEECCCccCCCC
Confidence 46777777778787774 567899999999999999999888888 888888884 43122344
Q ss_pred cEEecCCCceeeecccc
Q 037878 1665 GIYIGSQSPVMIKNTMH 1681 (2280)
Q Consensus 1665 ~~~~G~Pa~~~~~~~~~ 1681 (2280)
. +.+.+ +++.++...
T Consensus 246 ~-~~~~~-A~iik~~~~ 260 (276)
T 3gos_A 246 S-YSLYC-AVIVKKVDA 260 (276)
T ss_dssp S-CEEEE-EEEEEECCC
T ss_pred c-ccccc-cEEEEEcCh
Confidence 3 44444 555555543
No 187
>3r3r_A Ferripyochelin binding protein; structural genomics, csgid, center for structural genomics O infectious diseases, all beta protein; 1.20A {Salmonella enterica subsp} SCOP: b.81.1.0 PDB: 3tio_A 3tis_A
Probab=98.86 E-value=8.3e-09 Score=116.75 Aligned_cols=71 Identities=18% Similarity=0.162 Sum_probs=57.8
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEc-cC
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILG-AL 1652 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg-~~ 1652 (2280)
+.||++|.|+..+.+.. ++||++|+|+.++.|. +.++||++|+||++++|.+|..|+++++++ .-
T Consensus 84 ~~Ig~~~~Ig~~~~i~~---~~Ig~~~~Ig~~~~I~-----------~~~~Ig~~~~Ig~~s~V~~~~~i~~~~vv~G~p 149 (187)
T 3r3r_A 84 LIIGEDVTVGHKVMLHG---CTIGNRVLVGMGSIVL-----------DGAIIEDDVMIGAGSLVPQHKRLESGYLYLGSP 149 (187)
T ss_dssp EEECSSCEECTTCEEES---CEECSSEEECTTCEEC-----------TTCEECSSEEECTTCEECTTCEECTTEEEETTT
T ss_pred eEECCCCEECCCCEEeC---cEECCCCEECCCCEEC-----------CCCEECCCCEECCCCEECCCcCcCCCcEEEecC
Confidence 57899999988765533 8999999999999984 568999999999999999999999999854 44
Q ss_pred ccccCC
Q 037878 1653 SVAPMH 1658 (2280)
Q Consensus 1653 s~v~~~ 1658 (2280)
+.+.++
T Consensus 150 a~~i~~ 155 (187)
T 3r3r_A 150 VKQIRP 155 (187)
T ss_dssp TEEEEE
T ss_pred CeEcCc
Confidence 444433
No 188
>3tej_A Enterobactin synthase component F; nonribosomal peptide, thioesterase, carrier domain, ATP- BIN enterobactin biosynthesis, ION transport, iron; HET: UF0; 1.90A {Escherichia coli} PDB: 2roq_A
Probab=98.86 E-value=1.7e-09 Score=134.50 Aligned_cols=75 Identities=16% Similarity=0.177 Sum_probs=69.7
Q ss_pred CChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1077 MSNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1077 ~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.+.+++|+.|+++|+++||++ .|+.++|||++|||||+|++++++|++.+|+++++.++|++||+++||+++++.
T Consensus 7 ~p~~~~e~~l~~~~~~~l~~~--~i~~~~~ff~lGgdSl~a~~l~~~l~~~~~~~~~~~~~~~~~t~~~la~~~~~~ 81 (329)
T 3tej_A 7 APKAGSETIIAAAFSSLLGCD--VQDADADFFALGGHXLLAMKLAAQLSRQVARQVTPGQVMVASTVAKLATIIDAE 81 (329)
T ss_dssp CCCTTHHHHHHHHHHHHHTC---CCSTTCBTTTTTCCHHHHHHHHHHHHHHHTSCCCHHHHHHCCBHHHHHHHHHSC
T ss_pred CCCCHHHHHHHHHHHHHhCCC--CCCCCCCHHHcCCcHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHhh
Confidence 356789999999999999997 699999999999999999999999999999999999999999999999999753
No 189
>3c8v_A Putative acetyltransferase; YP_390128.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; 2.28A {Desulfovibrio desulfuricans subsp}
Probab=98.85 E-value=3.3e-09 Score=134.82 Aligned_cols=67 Identities=10% Similarity=0.068 Sum_probs=60.2
Q ss_pred ceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCC----cEeCCCcEEccCcccc--CCCccCCCcE
Q 037878 1593 QVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPN----SVVSRDVILGALSVAP--MHSVLQRGGI 1666 (2280)
Q Consensus 1593 ~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g----~~ig~~~~vg~~s~v~--~~~~v~~~~~ 1666 (2280)
.++||++|.|++++.| ..++||++|+||.+|+|.++ ++||++|+||++|+|. .+..||+++.
T Consensus 325 ~~vIG~~~~Ig~~a~I------------~gv~IGd~v~IG~~a~I~~~~~~~v~IG~~a~IGagsvV~~~~~~~I~~~s~ 392 (496)
T 3c8v_A 325 NSRLERNCVTAHGGKI------------INAHLGDMIFTGFNSFLQGSESSPLKIGDGCVVMPHTIIDLEEPLEIPAGHL 392 (496)
T ss_dssp EEEEEESCEECTTCEE------------ESEEEEETCEECTTCEEECCSSSCEEECTTCEECTTCEEECSSCEEECSSEE
T ss_pred ceEeCCCCEECCCcEE------------cCceECCCcEECCCCEEeCCCCcceEECCCCEECCCCEEecCCCcEeCCCCE
Confidence 3788888999988888 34899999999999999999 9999999999999999 5555999999
Q ss_pred EecCC
Q 037878 1667 YIGSQ 1671 (2280)
Q Consensus 1667 ~~G~P 1671 (2280)
+.|+.
T Consensus 393 v~G~v 397 (496)
T 3c8v_A 393 VWGYI 397 (496)
T ss_dssp ECSEE
T ss_pred EEEEe
Confidence 99985
No 190
>4hur_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); HET: ACO; 2.15A {Staphylococcus aureus} PDB: 4hus_A* 4e8l_A
Probab=98.85 E-value=6.5e-09 Score=120.35 Aligned_cols=97 Identities=18% Similarity=0.214 Sum_probs=76.1
Q ss_pred cCCEECCCcEEC-------------ccccCCCCceEECCCCEeCCCCEE----eeccccCCc------------------
Q 037878 1316 LGAKLGSSVLLD-------------TVDITDPSLVLIGDGAVISEGALI----QSHEVKNGV------------------ 1360 (2280)
Q Consensus 1316 lGa~Ig~~v~i~-------------~~~~~~~~~~~IG~~~~I~~~~~l----~~~~~~~~~------------------ 1360 (2280)
-+++||++++|+ .... ..+.++||++|.|+++|.| .+|.+++..
T Consensus 34 ~~v~IG~~t~i~~~~~~~~~~~vI~~~~~-Ig~~v~IG~~~~Ig~~v~i~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 112 (220)
T 4hur_A 34 ENILVGEYSYYDSKRGESFEDQVLYHYEV-IGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLK 112 (220)
T ss_dssp TTEEECTTCEEECSSSCCGGGGEESCCTT-TCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGG
T ss_pred CCEEECCCeEECCcCCcccCCeEEeCCCE-ECCCeEECCCCEECCCCEEEECCCCcccCCcceeeeeecccccccccccc
Confidence 467888888762 1111 2357899999999999997 344444321
Q ss_pred --eeecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1361 --LSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1361 --~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
...++++||++|+||++|+|.+|++||+||+||++|+| ++++.+ .|+||+..+
T Consensus 113 ~~~~~g~v~IG~~v~IG~~a~I~~gv~IG~gavIgagsvV~~dVp~~~vv-~G~PAk~ir 171 (220)
T 4hur_A 113 DLPLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIV-GGNPLKFIR 171 (220)
T ss_dssp GSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEE-ETTTTEEEE
T ss_pred cccccCCeEECCCcEECCCCEEeCCCEECCCCEEcCCCEEcccCCCCcEE-eCCCCEeeh
Confidence 14578999999999999999999999999999999999 677777 899999764
No 191
>3eg4_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid, beta helix, acyltransferase, amino-acid biosynthesis, cytoplasm; 1.87A {Brucella suis}
Probab=98.81 E-value=1.1e-08 Score=123.00 Aligned_cols=61 Identities=11% Similarity=0.136 Sum_probs=41.1
Q ss_pred cceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEe
Q 037878 1592 QQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYI 1668 (2280)
Q Consensus 1592 ~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~ 1668 (2280)
+.+.|||+|+||.+|.|. ..++||++|+||++++|.+|++|+++++ ++.+.++ ||+++++.
T Consensus 201 ~~v~IGd~v~IG~~a~I~-----------~gv~IG~~avIgagsvV~~g~~Igd~~~---g~~~~~~--Ip~~svV~ 261 (304)
T 3eg4_A 201 GPTIIEDNCFIGARSEVV-----------EGCIVREGSVLGMGVFIGKSTKIVDRAT---GEVFYGE--VPPYSVVV 261 (304)
T ss_dssp CCCEECTTCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCCEEETTT---CCEECSE--ECTTEEEE
T ss_pred CCeEEcCCCEECCCCEEc-----------CCcEECCCcEECCCCEEcCCeEECccce---eeeccCE--eCCCCEEe
Confidence 357888888888888774 5678888888888888888775555442 2233334 56666655
No 192
>2ggo_A 401AA long hypothetical glucose-1-phosphate thymidylyltransferase; beta barrel; 1.80A {Sulfolobus tokodaii} PDB: 2ggq_A*
Probab=98.81 E-value=2e-08 Score=128.58 Aligned_cols=63 Identities=19% Similarity=0.392 Sum_probs=52.5
Q ss_pred CEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCc
Q 037878 1318 AKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQK 1397 (2280)
Q Consensus 1318 a~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~ 1397 (2280)
..|+.++.+.. .+.||++|.|++++.|. +++.||++|.||++++|.++++||+++.||+++.
T Consensus 233 ~~i~~~~~i~~-------~~~ig~~~~I~~~~~i~-----------~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~ig~~~~ 294 (401)
T 2ggo_A 233 GNVEDNVKIKG-------KVIIEEDAEIKSGTYIE-----------GPVYIGKGSEIGPNSYLRPYTILVEKNKIGASVE 294 (401)
T ss_dssp SEECSSCEEES-------CEEECTTCEECTTCEEE-----------SSEEECTTCEECSSCEECTTEEECSSCEEEETCE
T ss_pred ceeCCCCEEcC-------CeEEcCCCEECCCCEEe-----------CCeEECCCCEECCCCEEcCCcEECCCCEECCCCE
Confidence 45666666543 46799999999999887 4678999999999999999999999999999776
Q ss_pred c
Q 037878 1398 S 1398 (2280)
Q Consensus 1398 v 1398 (2280)
|
T Consensus 295 i 295 (401)
T 2ggo_A 295 V 295 (401)
T ss_dssp E
T ss_pred E
Confidence 5
No 193
>2lol_A ACP, acyl carrier protein; lipid transport; NMR {Rickettsia prowazekii str}
Probab=98.81 E-value=1e-08 Score=98.29 Aligned_cols=75 Identities=11% Similarity=0.183 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.+++++.++++|+++|+++++.|+.+++|| ++|+|||.++++...++++||++++..++++++|+++|++++.+.
T Consensus 4 ~~~i~~~l~~ii~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 79 (81)
T 2lol_A 4 TDKIEQKVIEMVAEKLNKDKAIITTDSRFIEDLKADSLDTVELMMAIEVEYGIDIPDDEATKIKTVSDVIKYIKER 79 (81)
T ss_dssp HHHHHHHHHHHHHHHSCCCTTTCCTTCCHHHHTTCCHHHHHHHHHHHHHHHCCCCCGGGGGGSSSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChhhCCCCCcHHHhcCCcHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHHh
Confidence 467889999999999999888999999997 999999999999999999999999999999999999999998753
No 194
>1xat_A Xenobiotic acetyltransferase; chloramphenicol, LEFT-handed helix; 3.20A {Pseudomonas aeruginosa} SCOP: b.81.1.3 PDB: 2xat_A*
Probab=98.81 E-value=1.2e-08 Score=116.03 Aligned_cols=101 Identities=19% Similarity=0.205 Sum_probs=79.7
Q ss_pred HHHcCCEECCCcEECcc----c-----c------CCCCceEECCCCEeCCCCEEe--e---cccc---------------
Q 037878 1313 FEMLGAKLGSSVLLDTV----D-----I------TDPSLVLIGDGAVISEGALIQ--S---HEVK--------------- 1357 (2280)
Q Consensus 1313 ~R~lGa~Ig~~v~i~~~----~-----~------~~~~~~~IG~~~~I~~~~~l~--~---~~~~--------------- 1357 (2280)
.+.-+.+||++++|+.. . . .+.+.++||++|.|+++|.|. + |..+
T Consensus 18 ~~~~~I~IG~~~~I~~~~~~~~~~~~v~~~~~~~~~~~~i~IG~~~~Ig~~v~i~~~g~~~h~~~~~s~~p~~~~~~~~~ 97 (212)
T 1xat_A 18 VSNPNIRVGRYSYYSGYYHGHSFDDCARYLMPDRDDVDKLVIGSFCSIGSGAAFIMAGNQGHRAEWASTFPFHFMHEEPA 97 (212)
T ss_dssp CCCTTEEECTTCEECCTTTCCCGGGGEETCCSSCSSSCCEEECSSCEECTTCEEECSTTTTCCTTSSCCSCGGGCCSCGG
T ss_pred cccCCEEEcCCeEECCcccCccccceeEeeccccCcccCEEEcCCCEECCCCEEEeCCCCccccccccccceeeeccccc
Confidence 35568899999999741 1 0 024789999999999999983 2 4321
Q ss_pred -----CCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1358 -----NGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1358 -----~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
.+....++++||++|+||.+|+|.+|++||+||+||++|+| ++++.+ .|+|++..+
T Consensus 98 ~~~i~~~~~~~~~v~IG~~v~IG~~a~I~~gv~Ig~~~~IgagsvV~~~vp~~~~~-~G~Pa~~i~ 162 (212)
T 1xat_A 98 FAGAVNGYQPAGDTLIGHEVWIGTEAMFMPGVRVGHGAIIGSRALVTGDVEPYAIV-GGNPARTIR 162 (212)
T ss_dssp GGGCCCCCCCCCCEEECTTCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEE-ETTTTEEEE
T ss_pred ccccccCceecCCeEECCCCEECCCCEEeCCCEECCCCEECCCCEEcccCCCCcEE-EccCCEEEc
Confidence 11234578999999999999999999999999999999998 677777 799999764
No 195
>3f1x_A Serine acetyltransferase; NESG X-RAY BVR62 A6KZB9 A6KZB9_BACV8, structural genomics, P protein structure initiative; 2.00A {Bacteroides vulgatus atcc 8482}
Probab=98.80 E-value=1.5e-08 Score=120.77 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=62.0
Q ss_pred CEECCCcEEC-ccccCCCCceEECCCCEeCCCCEEeeccccCC----c--eeecCEEECCCcEECCCCEECCCCEECCCC
Q 037878 1318 AKLGSSVLLD-TVDITDPSLVLIGDGAVISEGALIQSHEVKNG----V--LSFQPIKIARKVSVGPYAVIQKGSVIGEEA 1390 (2280)
Q Consensus 1318 a~Ig~~v~i~-~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~----~--~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a 1390 (2280)
|+||+++.|+ .......+.++||++|.|+++|.|++....-+ . -..++++||++|+||++|+|.+|++||+||
T Consensus 197 a~IG~~v~I~hg~gvvIG~~~~IG~~v~I~~gvtIg~~~~~~~~~g~~i~~~~~~~~IGd~V~IGaga~Il~gv~IGd~a 276 (310)
T 3f1x_A 197 AQIGHHFTIDHGTGVVIGATSIIGNNVKLYQGVTLGAKSFPLDNNGNPIKGIPRHPILEDDVIVYSNATILGRVTIGKGA 276 (310)
T ss_dssp CEECSSCEEESCTTCEECTTCEECSSCEEETTCEEECC--------------CCSCEECTTCEECTTCEEESSCEECTTC
T ss_pred CEECCCcEECCCCCeEECCceEEcCCCEECCCCEECCCccccccccccccCCCCCCEECCCcEEcCCCEECCCcEECCCC
Confidence 4455555551 11111223456666666666666655442110 0 123566999999999999999999999999
Q ss_pred EECcCCcc----CCCCccccCCCceee
Q 037878 1391 EVAPLQKS----EGGKPILKSTNANYV 1413 (2280)
Q Consensus 1391 ~ig~~s~v----~~~~~~~~g~p~~~~ 1413 (2280)
+||++|+| ++++.+ .|+|++..
T Consensus 277 ~IGagsvV~~dVp~~svv-~GnPAk~~ 302 (310)
T 3f1x_A 277 TVGGNIWVTENVPAGSRI-VQRKNKDE 302 (310)
T ss_dssp EECSSCEECSCBCTTCEE-CCCCCC--
T ss_pred EECCCCEECCccCCCcEE-ECCCcccC
Confidence 99999998 778888 88998865
No 196
>3hdq_A UDP-galactopyranose mutase; substrate and inhibitor, isomerase; HET: GDU FAD; 2.36A {Deinococcus radiodurans} PDB: 3hdy_A* 3he3_A* 3mj4_A*
Probab=98.79 E-value=6.8e-10 Score=139.32 Aligned_cols=46 Identities=26% Similarity=0.287 Sum_probs=42.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEe
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVE 65 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~ 65 (2280)
..+.||+|||||++||+||++|+++|. +|+|+|+++++||++++..
T Consensus 27 ~~~~dv~IIGaG~aGl~aA~~l~~~g~-~v~v~E~~~~~GG~~~~~~ 72 (397)
T 3hdq_A 27 SKGFDYLIVGAGFAGSVLAERLASSGQ-RVLIVDRRPHIGGNAYDCY 72 (397)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSSGGGCCEE
T ss_pred CCCCCEEEECccHHHHHHHHHHHHCCC-ceEEEeccCCCCCccceee
Confidence 456799999999999999999999998 6999999999999999876
No 197
>3vbi_A ANTD, galactoside O-acetyltransferase; anthrose, acylated sugar, LEFT-handed beta helix, sugar N-AC transferase; HET: COA 0FX; 1.80A {Bacillus cereus} PDB: 3vbj_A* 3vbm_A* 3vbk_A* 3vbp_A* 3vbl_A* 3vbn_A*
Probab=98.78 E-value=7.1e-09 Score=119.11 Aligned_cols=51 Identities=16% Similarity=0.214 Sum_probs=46.2
Q ss_pred ecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1363 FQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1363 ~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
.++++||++|+||++|+|.+|++||++|+||++|+| ++++.+ .|+||+...
T Consensus 132 ~~~v~IG~~v~IG~~~~I~~gv~Ig~~~~Ig~gsvV~~~v~~~~v~-~G~Pa~~i~ 186 (205)
T 3vbi_A 132 TGKVILKKHVIIGAHSIIFPNVVIGEGVAVGAMSMVKESLDDWYIY-VGVPVRKIK 186 (205)
T ss_dssp ECCEEECTTCEECTTCEECSSCEECTTCEECTTCEECSCBCTTEEE-ETTTTEEEE
T ss_pred cCCEEECCCCEECCCCEEcCCCEECCCCEEcCCCEECCccCCCeEE-EccCCEEee
Confidence 578999999999999999999999999999999999 667777 799998763
No 198
>1l0i_A Acyl carrier protein; acyl chain binding, fatty acid biosynt lipid transport; HET: PSR; 1.20A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ny7_B* 2fhs_C 1l0h_A* 1acp_A 1t8k_A 2fac_A* 2fad_A* 2fae_A* 2k92_A 2k93_A 2k94_A 2l0q_A
Probab=98.77 E-value=8.1e-09 Score=98.26 Aligned_cols=72 Identities=21% Similarity=0.302 Sum_probs=68.3
Q ss_pred HHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1081 DIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1081 ~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
+++++++++|+++++++++.++.+++|| ++|+|||.++++...+++.||++++..++++++|+++|++++.+
T Consensus 3 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~dlG~DSl~~~el~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 75 (78)
T 1l0i_A 3 TIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKMTTVQAAIDYING 75 (78)
T ss_dssp CHHHHHHHHHHHHHTCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHHHCCCCcchhhhcCCCHHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHH
Confidence 4678999999999999888999999998 99999999999999999999999999999999999999999875
No 199
>2cnr_A FAS, ACP, acyl carrier protein; polykdetide, phosphopantetheine, lipid transport; NMR {Streptomyces coelicolor} PDB: 2koo_A* 2kop_A* 2koq_A* 2kor_A* 2kos_A*
Probab=98.77 E-value=1.8e-08 Score=96.91 Aligned_cols=75 Identities=21% Similarity=0.367 Sum_probs=70.8
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
..+++++++.++|+++++++++.++.+++|| ++|+|||.++++...+++.||+.++..++++++|+++|++++.+
T Consensus 4 ~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 79 (82)
T 2cnr_A 4 TQEEIVAGLAEIVNEIAGIPVEDVKLDKSFTDDLDVDSLSMVEVVVAAEERFDVKIPDDDVKNLKTVGDATKYILD 79 (82)
T ss_dssp CHHHHHHHHHHHHHHHSCCCTTTCCTTSBTTTTSCCCHHHHHHHHHHHHGGGTBCCCGGGGGTCSBHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCHHHCCCCcchhhccCCChHHHHHHHHHHHHHhCCCCCHHHHHHcCCHHHHHHHHHH
Confidence 4577889999999999999888999999997 99999999999999999999999999999999999999999875
No 200
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=98.77 E-value=2.2e-08 Score=115.44 Aligned_cols=77 Identities=10% Similarity=0.217 Sum_probs=72.5
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVM 1155 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~ 1155 (2280)
.++++++|+++|+++|++++++|+.+++||+||+|||.+++++.+|++.+|++++..++|++||+++|++++.....
T Consensus 24 ~~~i~~~l~~~~a~~l~~~~~~i~~~~~f~~lG~DSl~~~el~~~l~~~~g~~l~~~~~~~~~Ti~~la~~l~~~~~ 100 (212)
T 2l22_A 24 DDECAQFLRQSLAAMLYCEPGQIRDGSRFLELGLDSVIAAQWIREINKHYQLKIPADGIYTYPVFKAFTQWVGTQLQ 100 (212)
T ss_dssp TTHHHHHHHHHHHHHTTCCTTSCCTTCBHHHHTCCHHHHHHHHHHHHHHTTCCCCTTHHHHCCBHHHHHHHHHTTSC
T ss_pred HHHHHHHHHHHHHHHHCcCHHHcCCCCCHHHhCCcHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHhcc
Confidence 56789999999999999988899999999999999999999999999999999999999999999999999986543
No 201
>4e8l_A Virginiamycin A acetyltransferase; structural genomics, antibiotic resistance, center for struc genomics of infectious diseases (csgid); 2.70A {Staphylococcus aureus}
Probab=98.76 E-value=1.7e-08 Score=115.45 Aligned_cols=97 Identities=18% Similarity=0.196 Sum_probs=77.2
Q ss_pred CCEECCCcEECccc------------cCCCCceEECCCCEeCCCCEEe----eccccC--------------------Cc
Q 037878 1317 GAKLGSSVLLDTVD------------ITDPSLVLIGDGAVISEGALIQ----SHEVKN--------------------GV 1360 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~------------~~~~~~~~IG~~~~I~~~~~l~----~~~~~~--------------------~~ 1360 (2280)
++.||++++|+... ....+.++||++|.|+++|.|. +|.+.+ +.
T Consensus 34 ~i~IG~~t~i~~~~~~~~~~~vi~~~~~i~~~v~IG~~~~I~~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~~~~~~ 113 (219)
T 4e8l_A 34 NILVGEYSYYDSKRGESFEDQVLYHYEVIGDKLIIGRFCSIGPGTTFIMNGANHRMDGSTYPFHLFRMGWEKYMPSLKDL 113 (219)
T ss_dssp SEEECTTCEEECSSSCCGGGGEESCCTTTCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTCGGGCCCTTTS
T ss_pred CEEECCccEEcCCcCceecceEEeecceeCCCEEECCCCEEcCCCEEEeCCCcceecCCCcceeEecCcccccccccccc
Confidence 67889998886420 1124679999999999999995 344332 12
Q ss_pred eeecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1361 LSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1361 ~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
...++++||++|+||++|+|.+|++||++|+||++|+| ++++.+ .|+||+...
T Consensus 114 ~~~g~v~Igd~v~IG~~a~I~~gv~IG~~~~IgagsvV~~dv~~~~~~-~G~Pa~~i~ 170 (219)
T 4e8l_A 114 PLKGDIEIGNDVWIGRDVTIMPGVKIGDGAIIAAEAVVTKNVAPYSIV-GGNPLKFIR 170 (219)
T ss_dssp CCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEE-ETTTTEEEE
T ss_pred cccCCcEECCCeEECCCCEEcCCCEECCCCEECCCCEEcccCCCCeEE-EecCCEeec
Confidence 33578999999999999999999999999999999998 677777 799998763
No 202
>2ehs_A ACP, acyl carrier protein; lipid transport, structural genomics, NPPSFA, national proje protein structural and functional analyses; 1.30A {Aquifex aeolicus} PDB: 2eht_A
Probab=98.76 E-value=9.5e-09 Score=97.55 Aligned_cols=72 Identities=19% Similarity=0.352 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1082 IVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
+++.++++|+++++++++.++.+++| +++|+|||.++++...+++.+|++++..++++++|+++|++++.+.
T Consensus 2 i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~~gi~i~~~~~~~~~tv~~l~~~i~~~ 74 (77)
T 2ehs_A 2 LEERVKEIIAEQLGVEKEKITPEAKFVEDLGADSLDVVELIMAFEEEFGIEIPDEDAEKIQTVGDVINYLKEK 74 (77)
T ss_dssp HHHHHHHHHHHHHCCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCChhhCCCccchhhccCCCHHHHHHHHHHHHHHhCCccCHHHHHHcCCHHHHHHHHHHH
Confidence 56789999999999988889999999 9999999999999999999999999999999999999999999764
No 203
>2ava_A ACP I, acyl carrier protein I, chloroplast; four-helix-bundle, biosynthetic protein; NMR {Spinacia oleracea} PDB: 2fva_A* 2fve_A 2fvf_A* 2xz0_D* 2xz1_C*
Probab=98.76 E-value=1.1e-08 Score=98.38 Aligned_cols=75 Identities=21% Similarity=0.325 Sum_probs=70.4
Q ss_pred hHHHHHHHHHHHHHhCCCCc-cccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1080 KDIVEFLKGLVSEQTGIPIT-KVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1080 ~~~e~~l~~iw~~vLg~~~~-~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
+++++.++++|+++|+++++ .|+++++|+++|+|||.++++...+++.||+.++..++++++|+++|++++.+..
T Consensus 3 ~~i~~~l~~i~~~~l~~~~~~~i~~~~~l~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 78 (82)
T 2ava_A 3 KETIDKVSDIVKEKLALGADVVVTADSEFSKLGADSLDTVEIVMNLEEEFGINVDEDKAQDISTIQQAADVIEGLL 78 (82)
T ss_dssp HHHHHHHHHHHHHHTTCSSSSCCCSSCCSCCCTTCCSCHHHHHHHHHHHTTCCCCGGGSSSCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCCCcccccCCCCchhhcCCCHHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHH
Confidence 57889999999999999876 8999999999999999999999999999999999999999999999999997654
No 204
>3q1x_A Serine acetyltransferase; cysteine biosynthesis, LEFT handed helix, OASS; 1.59A {Entamoeba histolytica} PDB: 3p47_A 3p1b_A
Probab=98.74 E-value=2.5e-08 Score=119.33 Aligned_cols=101 Identities=9% Similarity=0.124 Sum_probs=59.8
Q ss_pred HcCCEECCCcEECccc-c------CCCCceEECCCCEeCCCCEEeeccccCCceee-----cCEEECCCcEECCCCEECC
Q 037878 1315 MLGAKLGSSVLLDTVD-I------TDPSLVLIGDGAVISEGALIQSHEVKNGVLSF-----QPIKIARKVSVGPYAVIQK 1382 (2280)
Q Consensus 1315 ~lGa~Ig~~v~i~~~~-~------~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~-----~~i~Ig~~~~iG~~~~i~p 1382 (2280)
..|+.||+++.|+... + ..-+.++||++|.|+++|.|++....+....+ +.++||++|+||++|+|.+
T Consensus 161 ~~gv~I~p~a~IG~~v~I~~g~gvvIG~~~~IG~~v~I~~~vtIG~~~~ig~~~~i~~~~~~~~~IGd~v~IGaga~Ilg 240 (313)
T 3q1x_A 161 YTSIDIHPGASIKGHFFIDHGVGVVIGETAIIGEWCRIYQSVTLGAMHFQEEGGVIKRGTKRHPTVGDYVTIGTGAKVLG 240 (313)
T ss_dssp HHCCEECTTCEECSSCEESSCTTCEECTTCEECSSCEECTTCEEECCCCCCTTCCCCCCSSCSCEECSSCEECTTCEEES
T ss_pred cCCeEECCCCEECCCEEECCCCceEECCCcEECCCCEECCCcEEeCCcEECCCceEcCCCccCCEECCCCEECCCCEECC
Confidence 3555555555554322 1 12234555555555555555554433322222 3569999999999999999
Q ss_pred CCEECCCCEECcCCcc----CCCCccc-cCCCceeecc
Q 037878 1383 GSVIGEEAEVAPLQKS----EGGKPIL-KSTNANYVQK 1415 (2280)
Q Consensus 1383 g~~ig~~a~ig~~s~v----~~~~~~~-~g~p~~~~~~ 1415 (2280)
|++||+||+||++|+| ++++.+. +|+|++...+
T Consensus 241 gv~IG~~a~IGagsvV~~dVp~gs~vvi~G~PAkvik~ 278 (313)
T 3q1x_A 241 NIIVGSHVRIGANCWIDRDVDSNQTVYISEHPTHFVKP 278 (313)
T ss_dssp SCEECSSEEECTTCEECSCBCSSEEC------------
T ss_pred CcEECCCCEECCCCEECCCcCCCCEEEEcCCCcEEEee
Confidence 9999999999999999 6777774 3899987643
No 205
>4ea9_A Perosamine N-acetyltransferase; beta helix, acetyl coenzyme A, GDP-perosa transferase; HET: JBT; 0.90A {Caulobacter vibrioides} PDB: 4ea8_A* 4ea7_A* 4eaa_A* 4eab_A*
Probab=98.72 E-value=2.2e-08 Score=116.25 Aligned_cols=93 Identities=18% Similarity=0.193 Sum_probs=73.3
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceeec-------CEEECCCcEECCCCEECCCCEECCC
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQ-------PIKIARKVSVGPYAVIQKGSVIGEE 1389 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~-------~i~Ig~~~~iG~~~~i~pg~~ig~~ 1389 (2280)
+++||+++.|....... ..++||++|.|++++.|......++..+++ +++||++|+||++|+|.+|++||++
T Consensus 111 ~v~IG~g~~I~~~~~i~-~~~~IG~~~~I~~~~~I~~~~~Ig~~~~i~~~~~i~~~v~Ig~~~~Ig~~~~i~~~~~Ig~~ 189 (220)
T 4ea9_A 111 SVRLGEGVAVMAGVAIN-ADSWIGDLAIINTGAVVDHDCRLGAACHLGPASALAGGVSVGERAFLGVGARVIPGVTIGAD 189 (220)
T ss_dssp TCEECSSCEECTTCEEC-TTCEECTTCEECTTCEECTTCEECTTCEECTTCEECSSCEECTTCEECTTCEECTTCEECTT
T ss_pred CCEECCCCEEcCCCEEC-CCCEECCCCEECCCCEECCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEEcCCcEECCC
Confidence 46788888886544322 347788888888888776555555444444 4999999999999999999999999
Q ss_pred CEECcCCcc----CCCCccccCCCce
Q 037878 1390 AEVAPLQKS----EGGKPILKSTNAN 1411 (2280)
Q Consensus 1390 a~ig~~s~v----~~~~~~~~g~p~~ 1411 (2280)
++||++|+| ++++.+ .|+||+
T Consensus 190 ~~igagsvv~~~v~~~~~~-~G~Pa~ 214 (220)
T 4ea9_A 190 TIVGAGGVVVRDLPDSVLA-IGVPAK 214 (220)
T ss_dssp CEECTTCEECSCBCTTCEE-ETTTTE
T ss_pred CEECCCCEEccccCCCcEE-EEeCCE
Confidence 999999998 677777 799998
No 206
>1x3o_A Acyl carrier protein; structural genomics, riken structural genomics/proteomics in RSGI, NPPSFA; 1.50A {Thermus thermophilus}
Probab=98.71 E-value=2e-08 Score=96.13 Aligned_cols=75 Identities=17% Similarity=0.297 Sum_probs=70.6
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.++++++++++|+++++++++.++.+++| +++|+|||.++++...+++.||+.++..++++++|+++|++++.+.
T Consensus 3 ~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 78 (80)
T 1x3o_A 3 EQEIFEKVKAVIADKLQVEPEKVTLEARFIEDLGADSLDTVELIMGLEDEFGLEISDEEAEKIRTVKDAVEYIKAK 78 (80)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCTTCBTTTTTCCCHHHHHHHHHHHHHHHCCCCCHHHHHHCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCCCHHHCCCcCcHHhhcCccHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHH
Confidence 46788999999999999988889999999 9999999999999999999999999999999999999999998763
No 207
>2kjs_A Putative acyl carrier protein; alpha, ACP, PNS, structural genomics, PSI-2, protein structure initiative; HET: PNS; NMR {Geobacter metallireducens gs-15} PDB: 2lml_A* 2kwm_A*
Probab=98.70 E-value=1.8e-08 Score=96.88 Aligned_cols=73 Identities=11% Similarity=0.088 Sum_probs=68.2
Q ss_pred HHHHHHHHHHHhCCCCccccCCCChhh-cccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhh
Q 037878 1083 VEFLKGLVSEQTGIPITKVSATDSLVS-YGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVM 1155 (2280)
Q Consensus 1083 e~~l~~iw~~vLg~~~~~i~~~~~Ff~-lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~ 1155 (2280)
.+.|+++|+++|+++...|.++.+|++ +|.|||.+++++.++++.||++++..++++.+|+++|++++++...
T Consensus 4 le~l~~I~~e~l~~d~~~i~~~~~~~d~lg~DSL~~veli~~ie~~fgi~i~~~~l~~~~TV~dl~~~I~~kl~ 77 (87)
T 2kjs_A 4 LDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLA 77 (87)
T ss_dssp HHHHHHHHHHHHTCSSCCCCTTCCSTTCSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCccccCCCCCcccCCCCChHHHHHHHHHHHHHhCceecHHHHHcCCCHHHHHHHHHHHHH
Confidence 468999999999999889999999998 7999999999999999999999999999999999999999987543
No 208
>3tk8_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- succinyltransferase; ssgcid; 1.80A {Burkholderia pseudomallei}
Probab=98.67 E-value=7.9e-08 Score=115.81 Aligned_cols=51 Identities=24% Similarity=0.234 Sum_probs=30.6
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCc-------EEccCccc
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDV-------ILGALSVA 1655 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~-------~vg~~s~v 1655 (2280)
++|||+|+||.+|.|. ..++||++|+||++++|..+++|++.+ .|+++|+|
T Consensus 219 v~IGd~v~IG~~a~I~-----------~gv~IG~g~vIgagsvV~~~t~I~d~~~~~v~~g~Vp~gsvV 276 (316)
T 3tk8_A 219 VIIEDNCFIGARSEVV-----------EGVIVEENSVISMGVYLGQSTKIYDRETGEVTYGRIPAGSVV 276 (316)
T ss_dssp CEECTTCEECTTCEEC-----------TTCEECTTCEECTTCEECTTCCEEETTTCCEECSEECTTEEE
T ss_pred cEECCCCEECCCCEEc-----------CCCEECCCCEEcCCCEEcCCeeecccccccccccEeCCCCEE
Confidence 4555555555555553 345667777777777777766555555 55555555
No 209
>2dnw_A Acyl carrier protein; ACP, fatty acid biosynthesis, mitochondria, NADH:ubiquinone oxidereductase, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=98.67 E-value=4e-08 Score=97.90 Aligned_cols=78 Identities=15% Similarity=0.261 Sum_probs=73.0
Q ss_pred CChhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1077 MSNKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1077 ~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
...++++++|.++|+++++++++.|+.+++|| ++|+|||.++++...|+++||++++..++++++|+++|++++.+..
T Consensus 11 m~~~~i~~~l~~~l~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~ 89 (99)
T 2dnw_A 11 LTLEGIQDRVLYVLKLYDKIDPEKLSVNSHFMKDLGLDSLDQVEIIMAMEDEFGFEIPDIDAEKLMCPQEIVDYIADKK 89 (99)
T ss_dssp CCHHHHHHHHHHHHHHCTTSCTTTCCTTCCCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCSHHHHHHHHHHHC
T ss_pred CCHHHHHHHHHHHHHHHhCCCHhhCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHHHh
Confidence 34678999999999999999888999999997 9999999999999999999999999999999999999999998754
No 210
>2wlg_A Polysialic acid O-acetyltransferase; enzyme, LEFT-handed beta HEL; HET: SOP; 1.90A {Neisseria meningitidis serogroup Y} PDB: 2wld_A 2wle_A* 2wlf_A* 2wlc_A*
Probab=98.67 E-value=3.5e-08 Score=114.02 Aligned_cols=98 Identities=16% Similarity=0.252 Sum_probs=74.0
Q ss_pred CEECCCcEECccccC--CCCceEECCCCEeCCCCEEeecc---cc-----CCceeecCEEECCCcEECCCCEECCCCEEC
Q 037878 1318 AKLGSSVLLDTVDIT--DPSLVLIGDGAVISEGALIQSHE---VK-----NGVLSFQPIKIARKVSVGPYAVIQKGSVIG 1387 (2280)
Q Consensus 1318 a~Ig~~v~i~~~~~~--~~~~~~IG~~~~I~~~~~l~~~~---~~-----~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig 1387 (2280)
.+||++|.|+...+. +...++||++|.|+++|.|.+.. +. ......++++||++|+||++++|.+|++||
T Consensus 80 ~~IG~~~~Ig~~~ii~~~~~~i~IG~~~~Ig~~~~I~~~~~h~~~~~~~~~~~~~~~~v~Igd~v~IG~~~~I~~gv~Ig 159 (215)
T 2wlg_A 80 LQIQAKTTMGNGEITIAEKGKISIGKDCMLAHGYEIRNTDMHPIYSLENGERINHGKDVIIGNHVWLGRNVTILKGVCIP 159 (215)
T ss_dssp EEECTTCEECSEEEEECTTCEEEECTTCEECTTEEEESCCSSCEEETTTCBBCCCCCCEEECTTCEECTTCEECTTCEEC
T ss_pred EEEcCCCEECCEEEEEeCCCCEEECCCCEEcCCEEEECCCCcccccccccccccCCCCeEECCCcEECCCCEECCCCEEC
Confidence 667777777653321 22567889999999888887542 11 012234689999999999999999999999
Q ss_pred CCCEECcCCcc----CCCCccccCCCceeecc
Q 037878 1388 EEAEVAPLQKS----EGGKPILKSTNANYVQK 1415 (2280)
Q Consensus 1388 ~~a~ig~~s~v----~~~~~~~~g~p~~~~~~ 1415 (2280)
++|+||++|+| ++++.+.+|+||+....
T Consensus 160 ~~~vIgagsvV~~~vp~~~i~~aG~Pa~~i~~ 191 (215)
T 2wlg_A 160 NNVVVGSHTVLYKSFKEPNCVIAGSPAKIVKE 191 (215)
T ss_dssp SSCEECTTCEECSCCCCCSCEEETTTTEEEEC
T ss_pred CCCEECCCCEEcCccCCCeEEEcccCCEEECC
Confidence 99999999998 66777733999997643
No 211
>3v76_A Flavoprotein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: FDA; 2.51A {Sinorhizobium meliloti}
Probab=98.66 E-value=1.1e-07 Score=121.28 Aligned_cols=42 Identities=21% Similarity=0.366 Sum_probs=36.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.++||+|||||++||+||+.|+++|. +|+|+|+++.+||++
T Consensus 25 ~~~~dViIIGgG~AGl~aA~~La~~G~-~V~llEk~~~~g~~~ 66 (417)
T 3v76_A 25 AEKQDVVIIGAGAAGMMCAIEAGKRGR-RVLVIDHARAPGEKI 66 (417)
T ss_dssp ---CCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCHHH
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCCCCcee
Confidence 346799999999999999999999998 699999999997744
No 212
>1mr7_A Streptogramin A acetyltransferase; LEFT-handed parallel beta-helix domain; 1.80A {Enterococcus faecium} SCOP: b.81.1.3 PDB: 1khr_A* 1kk5_A 1kk4_A 1kk6_A 1mr9_A* 1mrl_A* 3dho_A*
Probab=98.66 E-value=3.6e-08 Score=112.32 Aligned_cols=99 Identities=22% Similarity=0.204 Sum_probs=77.7
Q ss_pred HcCCEECCCcEECcc---cc---------CCCCceEECCCCEeCCCCEEe----eccccC----------C---------
Q 037878 1315 MLGAKLGSSVLLDTV---DI---------TDPSLVLIGDGAVISEGALIQ----SHEVKN----------G--------- 1359 (2280)
Q Consensus 1315 ~lGa~Ig~~v~i~~~---~~---------~~~~~~~IG~~~~I~~~~~l~----~~~~~~----------~--------- 1359 (2280)
.-+++||++++|+.. .+ ...+.++||++|.|+++|.|. .|.+.+ +
T Consensus 27 ~~~i~IG~~~~I~~~~~~~i~~~~i~~~~~i~~~v~IG~~~~Ig~gv~I~~~~~~h~~~~~~~~~~~i~~~~~~~~~i~~ 106 (209)
T 1mr7_A 27 LENVEVGEYSYYDSKNGETFDKQILYHYPILNDKLKIGKFCSIGPGVTIIMNGANHRMDGSTYPFNLFGNGWEKHMPKLD 106 (209)
T ss_dssp STTEEECTTCEEECSSSCCGGGGEESCCGGGCCCEEECSSCEECTTCEEECGGGCCCCSSCCCCGGGGCTTGGGGCCCGG
T ss_pred CCCeEECCCcEEcCCCceEEeceEEeeccccCCCEEECCCCEEcCCCEEEeCCCcccccCccccceEECCcccccccccc
Confidence 357899999999652 11 123569999999999999883 333322 1
Q ss_pred -ceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCcc----CCCCccccCCCceeec
Q 037878 1360 -VLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQ 1414 (2280)
Q Consensus 1360 -~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~ 1414 (2280)
....++++||++|+||++|+|.+|++||++++||++|+| ++++.+ .|+||+...
T Consensus 107 ~~~~~~~v~Ig~~v~IG~~a~I~~gv~Ig~~~~Igags~V~~~v~~~~i~-~G~Pa~~i~ 165 (209)
T 1mr7_A 107 QLPIKGDTIIGNDVWIGKDVVIMPGVKIGDGAIVAANSVVVKDIAPYMLA-GGNPANEIK 165 (209)
T ss_dssp GSCCCCCEEECSSCEECTTCEECTTCEECTTCEECTTCEECSCBCTTEEE-EETTEEEEE
T ss_pred cccccCCcEECCCCEEcCCCEEcCCCEECCCCEEcCCCEEcCCCCCCeEE-EeeCCEEee
Confidence 124578999999999999999999999999999999998 677777 789998763
No 213
>3jqy_B NEUO, polysialic acid O-acetyltransferase; LEFT-handed beta-helix polysia; HET: PEG; 1.70A {Escherichia coli}
Probab=98.66 E-value=2.6e-08 Score=117.99 Aligned_cols=97 Identities=18% Similarity=0.184 Sum_probs=73.1
Q ss_pred CEECCCcEECccccC--CCCceEECCCCEeCCCCEEeeccc--------cCCceeecCEEECCCcEECCCCEECCCCEEC
Q 037878 1318 AKLGSSVLLDTVDIT--DPSLVLIGDGAVISEGALIQSHEV--------KNGVLSFQPIKIARKVSVGPYAVIQKGSVIG 1387 (2280)
Q Consensus 1318 a~Ig~~v~i~~~~~~--~~~~~~IG~~~~I~~~~~l~~~~~--------~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig 1387 (2280)
..||++|.|+..... +...++||++|.||++|.|.++.- .......++++||++|+||++|+|.+|++||
T Consensus 106 v~IG~~~~Ig~~~~I~~~~~~~~IG~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~v~Igd~v~IG~~a~I~~gv~IG 185 (252)
T 3jqy_B 106 VIIGRRTTIGAGFEVVTDKCNVTIGHDCMIARDVILRASDGHPIFDIHSKKRINWAKDIIISSYVWVGRNVSIMKGVSVG 185 (252)
T ss_dssp EEECTTCEECTTCEEECSSSEEEECTTCEECSSEEEECSCSSCEEETTTCBBCCCCCCEEECSSCEECSSEEECTTCEEC
T ss_pred EEECCCCEECCCcEEEeCCCCeEECCCCEEcCCcEEecCCCcccccccccccccccCCeEEecCcEECCCCEECCCCEEC
Confidence 356777777543221 122678888888888888865421 1123455789999999999999999999999
Q ss_pred CCCEECcCCcc----CCCCccccCCCceeecc
Q 037878 1388 EEAEVAPLQKS----EGGKPILKSTNANYVQK 1415 (2280)
Q Consensus 1388 ~~a~ig~~s~v----~~~~~~~~g~p~~~~~~ 1415 (2280)
+||+||++|+| ++++.+ .|+|++....
T Consensus 186 ~~~~IgagsvV~~~vp~~~~~-~G~Pa~~i~~ 216 (252)
T 3jqy_B 186 SGSVIGYGSIVTKDVPSMCAA-AGNPAKIIKR 216 (252)
T ss_dssp TTCEECTTCEECSCBCTTEEE-EETTEEEEEE
T ss_pred CCCEECCCCEECcccCCCCEE-EccCCEEEcc
Confidence 99999999999 677777 7899998744
No 214
>3bfp_A Acetyltransferase; LEFT-handed beta helix, COA binding protein, N-glycan biosynthesis, bacillosamine, structural genomics, MKBSGI; HET: FLC; 1.75A {Campylobacter jejuni} SCOP: b.81.1.8 PDB: 2vhe_A* 3bsw_A* 3bss_A* 3bsy_A* 2npo_A
Probab=98.66 E-value=5e-08 Score=110.68 Aligned_cols=94 Identities=11% Similarity=0.142 Sum_probs=72.6
Q ss_pred CCEEC--CCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceee-------cCEEECCCcEECCCCEECCCCEEC
Q 037878 1317 GAKLG--SSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSF-------QPIKIARKVSVGPYAVIQKGSVIG 1387 (2280)
Q Consensus 1317 Ga~Ig--~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~-------~~i~Ig~~~~iG~~~~i~pg~~ig 1387 (2280)
+++|| +++.|...... ...++||++|.|++++.+......++..++ +.++||++|+||++++|.+|++||
T Consensus 87 ~~~Ig~~~g~~I~~~~~I-~~~~~IG~~~~I~~~~~i~~~~~Ig~~~~I~~~~~i~~~~~Ig~~~~Ig~~~~i~~~~~Ig 165 (194)
T 3bfp_A 87 SAIVEENAGILIMPYVVI-NAKAKIEKGVILNTSSVIEHECVIGEFSHVSVGAKCAGNVKIGKNCFLGINSCVLPNLSLA 165 (194)
T ss_dssp TCEECTTSCCEECTTCEE-CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECTTCEEC
T ss_pred CceeCCCCCcEEcCCCEE-CCCCEECCCCEECCCCEEcCCCEECCCCEECCCCEECCCcEECCCCEEcCCCEECCCCEEC
Confidence 57888 88888654332 245778888888888877654444444333 449999999999999999999999
Q ss_pred CCCEECcCCcc----CCCCccccCCCcee
Q 037878 1388 EEAEVAPLQKS----EGGKPILKSTNANY 1412 (2280)
Q Consensus 1388 ~~a~ig~~s~v----~~~~~~~~g~p~~~ 1412 (2280)
++++||++|+| ++++.+ .|+||+.
T Consensus 166 ~~~~Igagsvv~~~v~~~~~~-~G~Pa~~ 193 (194)
T 3bfp_A 166 DDSILGGGATLVKNQDEKGVF-VGVPAKR 193 (194)
T ss_dssp TTCEECTTCEECSCBCSCCEE-CCCCCCC
T ss_pred CCCEECCCCEEccccCCCCEE-EeeccEE
Confidence 99999999988 667777 7888863
No 215
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.62 E-value=4e-08 Score=119.23 Aligned_cols=68 Identities=15% Similarity=0.102 Sum_probs=49.6
Q ss_pred eEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCccccCCCccCCCcEEec
Q 037878 1594 VTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALSVAPMHSVLQRGGIYIG 1669 (2280)
Q Consensus 1594 ~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G 1669 (2280)
++||++|.|+.++.|++.. .++ ..++++||++|+||.+++ +|++||+||+||++|+|+++ ++.... .|
T Consensus 265 vvIGdnv~Ig~ga~I~g~l-~g~--~~~~VvIGdnv~IGagAv--~GV~IGdgavIGAGsVVt~d--v~i~~~-~G 332 (387)
T 2rij_A 265 AIVGEGSDVGGGASILGVL-SGT--SGNAISVGKACLLGANSV--TGIPLGDNCIVDAGIAVLEG--TKFLLK-DA 332 (387)
T ss_dssp CEECTTCEECTTCEECCBC-SST--TCCBCEECTTCEECTTCE--ECSCBCTTCEECTTCEECTT--CEEEEC-CH
T ss_pred CEECCCCEECCCceEccee-cCC--CccCeEEeCCCEECCCCc--CCcEECCCCEECCCCEECCC--ceeeec-CC
Confidence 4455556666666553211 111 125689999999999999 99999999999999999999 666554 55
No 216
>3gzm_A Acyl carrier protein; helix bundle, phosphopantetheine, fatty acid biosynthesis, L synthesis, transit peptide, biosynthetic protein; HET: PNS; 1.80A {Plasmodium falciparum} SCOP: a.28.1.0 PDB: 3gzl_A* 2fq0_A* 2fq2_A*
Probab=98.61 E-value=6.2e-08 Score=92.72 Aligned_cols=75 Identities=19% Similarity=0.310 Sum_probs=71.0
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.+++++.+++++++++++++++|+++++|+ ++|.|||.+++++..+.+.||++++..++++.+|+++|++++.+.
T Consensus 3 ~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlg~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 78 (81)
T 3gzm_A 3 LKSTFDDIKKIISKQLSVEEDKIQMNSNFTKDLGADSLDLVELIMALEEKFNVTISDQDALKINTVQDAIDYIEKN 78 (81)
T ss_dssp HHHHHHHHHHHHHHHHTCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHHTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhCcCHHHCCCCCcchhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHH
Confidence 567889999999999999988999999997 999999999999999999999999999999999999999999764
No 217
>3dme_A Conserved exported protein; structural genomics, PSI-2, PROT structure initiative, northeast structural genomics consort NESG; HET: FAD TLA; 1.70A {Bordetella pertussis}
Probab=98.61 E-value=2.1e-07 Score=117.50 Aligned_cols=41 Identities=29% Similarity=0.345 Sum_probs=36.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
++++||+|||||++|++||++|+++|+ +|+|+||++.+|+.
T Consensus 2 ~~~~dvvIIG~G~~Gl~~A~~La~~G~-~V~vlE~~~~~~~~ 42 (369)
T 3dme_A 2 STDIDCIVIGAGVVGLAIARALAAGGH-EVLVAEAAEGIGTG 42 (369)
T ss_dssp -CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSSCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCCCCc
Confidence 456799999999999999999999999 69999999877753
No 218
>3fsy_A Tetrahydrodipicolinate N-succinyltransferase; beta helix, L beta H domain, acyltransferase; HET: SCA; 1.97A {Mycobacterium tuberculosis} PDB: 3fsx_A*
Probab=98.59 E-value=5.3e-08 Score=113.08 Aligned_cols=84 Identities=21% Similarity=0.315 Sum_probs=62.9
Q ss_pred cCCEECCCcEECccccCCC---------------CceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEE
Q 037878 1316 LGAKLGSSVLLDTVDITDP---------------SLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVI 1380 (2280)
Q Consensus 1316 lGa~Ig~~v~i~~~~~~~~---------------~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i 1380 (2280)
.||+||+++.|.+..+... ..++||++|.|+++|.|.+..- + -..++++||++|+||++|+|
T Consensus 172 ~gA~IGeGv~Igp~~fVniga~Ig~g~~In~~i~iGv~IGd~v~IgpGa~IgG~~~-~--~~~~~V~IGDnv~IGanAtI 248 (332)
T 3fsy_A 172 LGAHLAPGTTVMHEGFVNYNAGTLGASMVEGRISAGVVVGDGSDVGGGASIMGTLS-G--GGTHVISIGKRCLLGANSGL 248 (332)
T ss_dssp TTEEECTTCEECTTCEECTTEEESSCCEECSEECTTCEECTTCEECTTCEECSBCC------CCBCEECTTCEECTTCEE
T ss_pred CCCEECCCCEEccccEEEECCeECcCCEECCceecceEECCCCEECCCCEEcCCCC-C--CCccceEECCCCEECCCCEE
Confidence 4677777777764221111 1278999999999998876421 1 23468999999999999999
Q ss_pred CCCCEECCCCEECcCCccCCCCcc
Q 037878 1381 QKGSVIGEEAEVAPLQKSEGGKPI 1404 (2280)
Q Consensus 1381 ~pg~~ig~~a~ig~~s~v~~~~~~ 1404 (2280)
|++||+||+||++|+|..++++
T Consensus 249 --gVtIGd~~iIGAGSVVtkdt~I 270 (332)
T 3fsy_A 249 --GISLGDDCVVEAGLYVTAGTRV 270 (332)
T ss_dssp --CSCBCSSCEECTTCEECTTCEE
T ss_pred --eeEECCCCEECCCCEECCCCEE
Confidence 9999999999999999777666
No 219
>2l22_A Mupirocin didomain acyl carrier protein; biosynthetic protein; NMR {Pseudomonas fluorescens}
Probab=98.59 E-value=7.4e-08 Score=110.98 Aligned_cols=76 Identities=18% Similarity=0.261 Sum_probs=71.6
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
.+.++++|+++|+++|+++++.|+.+++||++|+|||.+++++..|++.+|++++..++|++||+++|++++.+..
T Consensus 128 ~~~i~~~l~~~~~~~l~~~~~~i~~~~~f~~lG~DSl~a~el~~~l~~~~g~~l~~~~l~~~~Ti~~La~~l~~~~ 203 (212)
T 2l22_A 128 RESIQDYLKQSLGELLFLDPGQLRSGAQFLDLGMDSVTGTQWMRGVSRHFSIQLAADAIYTWPTLKSLADEVDRRV 203 (212)
T ss_dssp HHHHHHHHHHHHHHHHSSCSSSCCSSCCGGGGCSSSHHHHHHHHHHHHHTTCCCCGGGGGGCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCChhhCCCCCCHHHhCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence 4678899999999999998889999999999999999999999999999999999999999999999999997654
No 220
>3r8y_A 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N- acetyltransferase; structural genomics, csgid; 1.70A {Bacillus anthracis} PDB: 3cj8_A*
Probab=98.59 E-value=7.9e-08 Score=113.16 Aligned_cols=97 Identities=18% Similarity=0.273 Sum_probs=68.2
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceee---------------cCEEECCCcEECCCCEEC
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSF---------------QPIKIARKVSVGPYAVIQ 1381 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~---------------~~i~Ig~~~~iG~~~~i~ 1381 (2280)
+++||++|.|...... ...+.||++|.|+.++.|.++...+...++ ++++||++|+||++|+|.
T Consensus 103 ~v~Ig~~~~I~~~s~I-~~~~~IG~~~~I~~~~~I~~~~~IG~~~~I~~~~~i~~~~~~~~~~~~~Ig~~~~IG~~~~I~ 181 (240)
T 3r8y_A 103 HVEIGDNAVIMMNATI-NIGAVIGEGSMIDMNAVLGGRATVGKNCHVGAGAVLAGVIEPPSAKPVIVEDDVVIGANVVVL 181 (240)
T ss_dssp SCEECTTCEECTTCEE-CTTCEECTTCEECTTCEECTTCEECTTCEECTTCEECCCCSCTTSCCCEECTTCEECTTCEEC
T ss_pred CcEECCCCEECCCCEE-CCCCEECCCCEECCCCEECCCCEECCCcEECCCcEECCCccCCCCCCcEECCCCEECCCCEEC
Confidence 3566666666432221 123556666666666655544444433333 358999999999999999
Q ss_pred CCCEECCCCEECcCCcc----CCCCccccCCCceeecc
Q 037878 1382 KGSVIGEEAEVAPLQKS----EGGKPILKSTNANYVQK 1415 (2280)
Q Consensus 1382 pg~~ig~~a~ig~~s~v----~~~~~~~~g~p~~~~~~ 1415 (2280)
+|++||++|+|+++++| ++++.+ .|+||+....
T Consensus 182 ~~~~Ig~~~~I~~gsvV~~~vp~~~v~-~G~Pak~i~~ 218 (240)
T 3r8y_A 182 EGVTVGKGAVVAAGAVVTEDVPPYTVV-AGTPARVIKE 218 (240)
T ss_dssp TTCEECTTCEECTTCEECSCBCTTEEE-EETTEEEEEE
T ss_pred CCcEECCCCEECCCCEECCCcCCCcEE-EccCCEEEec
Confidence 99999999999999988 677777 8999997643
No 221
>1klp_A ACP, ACPM, meromycolate extension acyl carrier protein; four-helix bundle, ligand transport; NMR {Mycobacterium tuberculosis} SCOP: a.28.1.1
Probab=98.59 E-value=1.8e-07 Score=95.90 Aligned_cols=79 Identities=23% Similarity=0.401 Sum_probs=73.2
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhc
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMK 1156 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~ 1156 (2280)
..++++++++++|+++||++++.|+.+++|| ++|+|||.++++...|++.||+.++..++++++|+++|++++.+....
T Consensus 4 ~~~~i~~~l~~il~~~l~~~~~~i~~d~~l~~dlG~DSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~~ 83 (115)
T 1klp_A 4 TQEEIIAGIAEIIEEVTGIEPSEITPEKSFVDDLDIDSLSMVEIAVQTEDKYGVKIPDEDLAGLRTVGDVVAYIQKLEEE 83 (115)
T ss_dssp CHHHHHHHHHHHHHHHTCCCTTTCCTTCCTTTTTCSHHHHHHHHHHHHHHHTCCCCCHHHHTTCCSHHHHHHHHHHHHSS
T ss_pred CHHHHHHHHHHHHHHHhCcCHHhCCCCCchhhccCCCHHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHHcc
Confidence 3577899999999999999988999999997 999999999999999999999999999999999999999999876543
No 222
>1f80_D Acyl carrier protein; transferase; HET: PN2; 2.30A {Bacillus subtilis} SCOP: a.28.1.1 PDB: 2x2b_A* 1hy8_A
Probab=98.58 E-value=4.1e-08 Score=94.14 Aligned_cols=74 Identities=19% Similarity=0.333 Sum_probs=69.1
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
.++++++++++|+++++++++.|+.+++| +++|+|||.++++...++++||++++..++++.+|+++|++++.+
T Consensus 5 ~~~i~~~l~~~l~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 79 (81)
T 1f80_D 5 SADTLERVTKIIVDRLGVDEADVKLEASFKEDLGADXLDVVELVMELEDEFDMEISDEDAEKIATVGDAVNYIQN 79 (81)
T ss_dssp CCHHHHHHHHHHHHHSSCCSSCCCTTCBHHHHSCCCHHHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHCC-
T ss_pred HHHHHHHHHHHHHHHHCCCHHhCCCccchHHHcCCcHHHHHHHHHHHHHHhCCccCHHHHHHCCCHHHHHHHHHh
Confidence 46788999999999999998899999999 899999999999999999999999999999999999999998753
No 223
>3r5d_A Tetrahydrodipicolinate N-succinyletransferase; 1.80A {Pseudomonas aeruginosa} PDB: 3r5b_A* 3r5c_A* 3r5a_A
Probab=98.57 E-value=5.9e-08 Score=113.63 Aligned_cols=64 Identities=19% Similarity=0.234 Sum_probs=51.7
Q ss_pred eEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCCccCCCCccc
Q 037878 1337 VLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQKSEGGKPIL 1405 (2280)
Q Consensus 1337 ~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s~v~~~~~~~ 1405 (2280)
++||++|.|+++|.|.+.. ++ ...++|+||++|+||++|+| |++||+||+||++|+|..+++++
T Consensus 231 v~IGdnv~IgpGa~IgG~~-~~--~~~~~V~IGdnv~IGAnAtI--GVtIGd~~iIGAGSVVtkdt~I~ 294 (347)
T 3r5d_A 231 VFVGKGSDLGGGCSTMGTL-SG--GGNIVISVGEGCLIGANAGI--GIPLGDRNIVEAGLYITAGTKVA 294 (347)
T ss_dssp CEECTTEEECTTCEECC---------CCCCEECTTCEECTTCEE--CSCBCTTCEECTTCEECTTCEEE
T ss_pred EEECCCCEECCCCEEcccc-CC--CCccceEECCCCEECCCCEE--eeEECCCCEECCCCEECCCCEEE
Confidence 6788888888888886542 11 23468999999999999999 99999999999999998888874
No 224
>2pig_A Putative transferase; SCR6, NESG, YDCK, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.38A {Salmonella paratyphi} PDB: 2f9c_A
Probab=98.57 E-value=5.9e-07 Score=109.12 Aligned_cols=49 Identities=12% Similarity=0.215 Sum_probs=27.5
Q ss_pred eCeEECCCcEEccCCeeCC-CcEeCCCcEEccCccccCCCccCCCcEEec
Q 037878 1621 GKVEVQDNSVIGSQSLVLP-NSVVSRDVILGALSVAPMHSVLQRGGIYIG 1669 (2280)
Q Consensus 1621 ~~~~IG~~~~iG~~~~v~~-g~~ig~~~~vg~~s~v~~~~~v~~~~~~~G 1669 (2280)
..+.||++|.||+++.+.+ .+.|+++++||.++.+...-.+..+....|
T Consensus 242 ~nv~Ig~nv~Ig~~~~ia~g~~~i~~~~vIGg~a~I~g~v~Ig~~~~I~~ 291 (334)
T 2pig_A 242 GNCVLKHHVLVGGHAEVRGGPILLDDRVLIEGHACIQGEILIERQVEISG 291 (334)
T ss_dssp SSEEECTTEEECTTCEEESSCEEEESSEEECTTCEEESSEEEESSEEECT
T ss_pred CCCEEcCCCEEeCCcEEcCCCeEECCeEEEcCCcEECcCcEECCCcEECC
Confidence 3455666666666555554 455666666666666665433444444433
No 225
>2qnw_A Acyl carrier protein; malaria, SGC, structural genomics CONS fatty acid biosynthesis, lipid synthesis, phosphopantethein transit peptide; 1.90A {Toxoplasma gondii}
Probab=98.57 E-value=1.1e-07 Score=91.26 Aligned_cols=75 Identities=17% Similarity=0.361 Sum_probs=70.5
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.++++++++++++++++++++.|+.+++|| ++|.|||.++++...+++.||++++..++++.+|+++|++++.+.
T Consensus 5 ~~~i~~~l~~ii~~~l~~~~~~i~~d~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 80 (82)
T 2qnw_A 5 DRPLLERVKDVVADQLGVDRARINPESNFIKDLDADSLDSVELVMAFEEKFGVSIPDEEASKIATVQDALSYIEKA 80 (82)
T ss_dssp SHHHHHHHHHHHHHHHCCCGGGCCTTCBHHHHSCCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHhhCCCccchhhccCCcHHHHHHHHHHHHHHHCCcCCHHHHHHcCCHHHHHHHHHHh
Confidence 467889999999999999888999999995 999999999999999999999999999999999999999998763
No 226
>3kkj_A Amine oxidase, flavin-containing; oxidoreductase, PSR10, Q888A4, X-RAY, structure, PSI, protein structure initiative; HET: FAD; 2.50A {Pseudomonas syringae PV}
Probab=98.53 E-value=4.6e-08 Score=118.35 Aligned_cols=48 Identities=35% Similarity=0.495 Sum_probs=43.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeecCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIEEA 69 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~~~ 69 (2280)
+.||+|||||+|||+||+.|+++|+ +|+||||++++||++++.+.++.
T Consensus 2 t~dV~IIGaGpaGL~aA~~La~~G~-~V~v~Ek~~~~GG~~~~~~~~~~ 49 (336)
T 3kkj_A 2 TVPIAIIGTGIAGLSAAQALTAAGH-QVHLFDKSRGSGGRMSSKRSDAG 49 (336)
T ss_dssp CCCEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEEEETTE
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCCCCCCcccccccCCc
Confidence 4799999999999999999999999 69999999999999998776543
No 227
>2i0z_A NAD(FAD)-utilizing dehydrogenases; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: FAD; 1.84A {Bacillus cereus} SCOP: c.3.1.8 e.74.1.1
Probab=98.50 E-value=2.4e-07 Score=120.03 Aligned_cols=40 Identities=40% Similarity=0.618 Sum_probs=36.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+++||+|||||++||+||+.|+++|. +|+|+||++.+|++
T Consensus 25 ~~~dVvIIGgG~aGl~aA~~la~~G~-~V~llEk~~~~g~~ 64 (447)
T 2i0z_A 25 MHYDVIVIGGGPSGLMAAIGAAEEGA-NVLLLDKGNKLGRK 64 (447)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCHH
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC-CEEEEECCCCCCce
Confidence 34799999999999999999999998 69999999988864
No 228
>3dje_A Fructosyl amine: oxygen oxidoreductase; fructosyl-amino acid, amadoriase, deglycation, fructosamine oxidase; HET: MSE FAD FSA EPE; 1.60A {Aspergillus fumigatus} PDB: 3djd_A*
Probab=98.50 E-value=5e-07 Score=117.13 Aligned_cols=43 Identities=40% Similarity=0.600 Sum_probs=37.7
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
|+.++||+|||||++||+||++|+++|+++|+||||++..||.
T Consensus 3 ~~~~~dVvIIGgG~aGlsaA~~La~~G~~~V~vlE~~~~~~~~ 45 (438)
T 3dje_A 3 VTKSSSLLIVGAGTWGTSTALHLARRGYTNVTVLDPYPVPSAI 45 (438)
T ss_dssp CCTTSCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSCSSCTT
T ss_pred CCCCCCEEEECCCHHHHHHHHHHHHcCCCcEEEEeCCCCCCCC
Confidence 3456899999999999999999999998249999999988874
No 229
>2l3v_A ACP, acyl carrier protein; structural genomi seattle structural genomics center for infectious disease, lipid binding protein; NMR {Brucella melitensis}
Probab=98.50 E-value=1.4e-08 Score=96.98 Aligned_cols=72 Identities=25% Similarity=0.337 Sum_probs=68.8
Q ss_pred HHHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1081 DIVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1081 ~~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
++++.++++|+++|+++++.|+.+++| +++|+|||.++++...+++.||++++..++++++|+++|++++.+
T Consensus 4 ~i~~~l~~~~~~~l~~~~~~i~~~~~l~~~lG~DSl~~~~l~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 76 (79)
T 2l3v_A 4 DTAERVKKIVVEHLGVDADKVTEGASFIDDLGADSLDTVELVMAFEEEFGVEIPDDAAETILTVGDAVKFIDK 76 (79)
T ss_dssp HHHHHHHHHHHHHTCCCSTTCCTTCCHHHHTCCCSSSSSSTTTTHHHHTTCCCCHHHHTTCSSSSTTHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCCccccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHHcCCHHHHHHHHHH
Confidence 578899999999999988899999999 899999999999999999999999999999999999999999875
No 230
>1or5_A Acyl carrier protein; ACP, biosynthesis, frenolicin, holo, polyketide synthase, PKS, biosynthetic protein; NMR {Streptomyces roseofulvus} SCOP: a.28.1.1
Probab=98.48 E-value=8.1e-08 Score=92.46 Aligned_cols=71 Identities=20% Similarity=0.252 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHhCCCCc-ccc--CCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1082 IVEFLKGLVSEQTGIPIT-KVS--ATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~~~-~i~--~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
+++.++++|+++|+++.+ .++ .+++|+++|+|||.++++...++++||++++..++++++|+++|++++.+
T Consensus 5 ~~~~l~~~l~~~l~~~~~~~i~~~~~~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~ 78 (83)
T 1or5_A 5 TVDDLKKLLAETAGEDDSVDLAGELDTPFVDLGYDSLALLETAAVLQQRYGIALTDETVGRLGTPRELLDEVNT 78 (83)
T ss_dssp CHHHHHHHHHHHSCCCSSCCGGGCSSSCHHHHSCCHHHHHHHHHHHHTTSCCCCSHHHHHHCCCSHHHHHHHTT
T ss_pred HHHHHHHHHHHHhCCCcccccCCCCCCcHHHhCCCHHHHHHHHHHHHHHHCCccCHHHHhccCCHHHHHHHHHH
Confidence 457899999999999876 788 89999999999999999999999999999999999999999999999864
No 231
>2kwl_A ACP, acyl carrier protein; structural genomics, seattle structura genomics center for infectious disease, ssgcid, lipid bindi protein; NMR {Borrelia burgdorferi}
Probab=98.48 E-value=3e-07 Score=88.72 Aligned_cols=76 Identities=13% Similarity=0.215 Sum_probs=71.3
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
..++++++++++++++++++++.|+.+++| .++|.|||.++++...++++||++++..++++.+|+++|++++.+.
T Consensus 6 ~~~~i~~~l~~~i~~~l~~~~~~i~~~~~l~~dlG~DSl~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~ 82 (84)
T 2kwl_A 6 DNDEIFSKVRSIISEQLDKKEDEITTDSRFVEDLNADSLDIYELLYLLEEAFDDKIPENEANEFETVGDVVNFIKKR 82 (84)
T ss_dssp THHHHHHHHHHHHHHHHCCCGGGCCTTTHHHHTSSSCHHHHHHHHHHHHHHHTCCTTTTGGGGCSSHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhCCCcccCCCCCchhhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHHCCCHHHHHHHHHHH
Confidence 457888999999999999988899999999 8999999999999999999999999999999999999999998764
No 232
>1nq4_A Oxytetracycline polyketide synthase acyl carrier protein; solution structure, dynamics, ACP, biosynthetic protein; NMR {Streptomyces rimosus} SCOP: a.28.1.1
Probab=98.46 E-value=1.9e-07 Score=91.93 Aligned_cols=73 Identities=18% Similarity=0.198 Sum_probs=66.3
Q ss_pred HHHHHHHHHHHhCCCCc----cccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhh
Q 037878 1083 VEFLKGLVSEQTGIPIT----KVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVM 1155 (2280)
Q Consensus 1083 e~~l~~iw~~vLg~~~~----~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~ 1155 (2280)
.+.++++|+++|+.+.. .|+.+++|+++|+|||.+++++.+|++.||++++..++++++|+++|++++.+...
T Consensus 6 ~~~l~~ii~~~l~~~~~~~~~~i~~d~~~~dlG~DSL~~vel~~~le~~fgi~i~~~~l~~~~Tv~~l~~~i~~~~~ 82 (95)
T 1nq4_A 6 LSDLLTLLRECAGEEESIDLGGDVEDVAFDALGYDSLALLNTVGRIERDYGVQLGDDAVEKATTPRALIEMTNASLT 82 (95)
T ss_dssp HHHHHHHHHHHHTCSSTTCSCSCCSSSCHHHHTCCSHHHHHHHHHHHHHTCCCSCTTHHHHCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHccccccccccCCCCCChhhhCCCHHHHHHHHHHHHHHHCCccCHHHHHcCCCHHHHHHHHHHHHh
Confidence 45788999999998643 68999999999999999999999999999999999999999999999999987553
No 233
>3ejb_A Acyl carrier protein; protein-protein complex, cytochrome P450 fold, carrier protein, 4-helix bundle, cytoplasm; HET: ZMP HTG HEM; 2.00A {Escherichia coli} SCOP: a.28.1.1 PDB: 3ejd_A* 3eje_A*
Probab=98.46 E-value=1.4e-07 Score=93.13 Aligned_cols=75 Identities=20% Similarity=0.279 Sum_probs=70.8
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
..+++++.|++++++++++++++|+.+++|+ +||.|||.++.+...|++.||++++..+++..+|+++|++++.+
T Consensus 19 t~~~i~~~l~~iia~~l~~~~~~i~~d~~l~~dLGlDSL~~vel~~~lE~~fgi~i~~~~l~~~~Tv~~l~~~i~~ 94 (97)
T 3ejb_A 19 HMSTIEERVKKIIGEQLGVKQEEVTNNASFVEDLGADSLDTVELVMALEEEFDTEIPDEEAEKITTVQAAIDYING 94 (97)
T ss_dssp CCCCHHHHHHHHHHHHSCCCTTTSCTTCBTTTTTCCCTTHHHHHHHHHHHHTTCCCCHHHHHHCCBHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHCcCHHHCCCCCCchhhcCCCHHHHHHHHHHHHHHHCCCCCHHHHHhCCCHHHHHHHHHH
Confidence 4567889999999999999999999999997 99999999999999999999999999999999999999999976
No 234
>2gqf_A Hypothetical protein HI0933; structural genomics, FAD-utilizing protein, flavoprotein, PS protein structure initiative; HET: FAD; 2.70A {Haemophilus influenzae} SCOP: c.3.1.8 e.74.1.1
Probab=98.45 E-value=5e-07 Score=114.80 Aligned_cols=43 Identities=33% Similarity=0.462 Sum_probs=38.1
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
||+++||+|||||++|++||+.|+++|. +|+|+||++.+|++.
T Consensus 1 MM~~~dViIIGgG~aGl~aA~~la~~G~-~V~vlEk~~~~g~~~ 43 (401)
T 2gqf_A 1 MSQYSENIIIGAGAAGLFCAAQLAKLGK-SVTVFDNGKKIGRKI 43 (401)
T ss_dssp CEEECSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCHHH
T ss_pred CCCCCCEEEECCcHHHHHHHHHHHhCCC-CEEEEeCCCCCchhc
Confidence 3456899999999999999999999998 699999999987643
No 235
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=98.44 E-value=2.2e-07 Score=120.68 Aligned_cols=63 Identities=21% Similarity=0.292 Sum_probs=49.7
Q ss_pred CeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccCc
Q 037878 1574 AKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGALS 1653 (2280)
Q Consensus 1574 ~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~s 1653 (2280)
+.||+++.|+. ++||++|.||++|.|.+..... ++.+||++|+||+++ ++||++++||++|
T Consensus 389 ~~Ig~~~~i~~---------~~Ig~~~~IG~~~~i~~~~~~~-----~~~~ig~~~~ig~~~-----v~Ig~~a~i~ags 449 (451)
T 1yp2_A 389 IGIGKNCHIKR---------AIIDKNARIGDNVKIINKDNVQ-----EAARETDGYFIKSGI-----VTVIKDALIPSGI 449 (451)
T ss_dssp SEECTTCEEES---------EEECTTCEECTTCEECCSSCCS-----CEEEGGGTEEEETTE-----EEECTTCEECTTC
T ss_pred EEECCCCEEec---------cEeCCCcEECCCCEEeCCcccc-----cCceeCCCEEEcCCE-----EEECCCcEECCCc
Confidence 57888888743 7899999999999986432221 223899999999888 8999999999999
Q ss_pred cc
Q 037878 1654 VA 1655 (2280)
Q Consensus 1654 ~v 1655 (2280)
+|
T Consensus 450 vv 451 (451)
T 1yp2_A 450 II 451 (451)
T ss_dssp BC
T ss_pred cC
Confidence 86
No 236
>3nyc_A D-arginine dehydrogenase; FAD, imino-arginine, oxidoreductas; HET: FAD IAR; 1.06A {Pseudomonas aeruginosa} PDB: 3nye_A* 3nyf_A* 3sm8_A*
Probab=98.42 E-value=3.4e-07 Score=116.24 Aligned_cols=39 Identities=28% Similarity=0.366 Sum_probs=35.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+++||+|||||++||+||++|+ +|+ +|+||||++++|+.
T Consensus 8 ~~~dv~IIGaGi~Gls~A~~La-~G~-~V~vlE~~~~~g~~ 46 (381)
T 3nyc_A 8 IEADYLVIGAGIAGASTGYWLS-AHG-RVVVLEREAQPGYH 46 (381)
T ss_dssp EECSEEEECCSHHHHHHHHHHT-TTS-CEEEECSSSSTTSS
T ss_pred CcCCEEEECCcHHHHHHHHHHh-CCC-CEEEEECCCCcccc
Confidence 3689999999999999999999 698 69999999888753
No 237
>3oz2_A Digeranylgeranylglycerophospholipid reductase; structural genomics, joint center for structural genomics; HET: MSE FAD OZ2; 1.60A {Thermoplasma acidophilum}
Probab=98.40 E-value=5.6e-07 Score=114.81 Aligned_cols=40 Identities=33% Similarity=0.517 Sum_probs=36.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
|+++||+|||||++||+||+.|+++|+ +|+||||++.+|.
T Consensus 2 Me~yDViIVGaGpaGl~~A~~La~~G~-~V~v~Er~~~~~~ 41 (397)
T 3oz2_A 2 METYDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSTTC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCCCCC
Confidence 446899999999999999999999999 6999999988765
No 238
>1af8_A Actinorhodin polyketide synthase acyl carrier Pro; acyl carrier protein, solution STR antibiotic biosynthesis; NMR {Streptomyces coelicolor} SCOP: a.28.1.1 PDB: 2af8_A 2k0x_A* 2k0y_A 2kg6_A* 2kg8_A* 2kg9_A* 2kga_A* 2kgc_A* 2kgd_A* 2kge_A*
Probab=98.40 E-value=2.1e-07 Score=90.24 Aligned_cols=73 Identities=15% Similarity=0.105 Sum_probs=67.5
Q ss_pred HHHHHHHHHHHHhCCCCc----cccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1082 IVEFLKGLVSEQTGIPIT----KVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~~~----~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
+++.++++++++++++.+ .|+++++|.++|.|||.++++...++++||++++..++++.+|+++|++++.+..
T Consensus 6 ~~~~l~~il~~~l~~~~~~~~~~i~~~~~l~dlG~DSL~~vel~~~le~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 82 (86)
T 1af8_A 6 TTDDLRRALVECAGETDGTDLSGDFLDLRFEDIGYDSLALMETAARLESRYGVSIPDDVAGRVDTPRELLDLINGAL 82 (86)
T ss_dssp CHHHHHHHHHTTCCCCSCCCTTTCSSTTSTTTTTCCTTTHHHHHHHHTTTTCSCCCTTTTTTCCSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCcccccccCCCCCChhhcCCCHHHHHHHHHHHHHHHCCCcCHHHHHcCCCHHHHHHHHHHHh
Confidence 467899999999999876 6789999999999999999999999999999999999999999999999998654
No 239
>3nix_A Flavoprotein/dehydrogenase; structural genomics, PSI-2, NES protein structure initiative, northeast structural genomics consortium; HET: FAD; 2.60A {Cytophaga hutchinsonii}
Probab=98.39 E-value=7.7e-07 Score=114.72 Aligned_cols=47 Identities=19% Similarity=0.093 Sum_probs=39.3
Q ss_pred HHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 195 LSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 195 la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
.+++.|++|+++++|++|+.+++++.+.+++.+|+..+++||.||.|
T Consensus 115 ~a~~~gv~i~~~~~v~~i~~~~~~~~v~v~~~~g~~~~~~a~~vV~A 161 (421)
T 3nix_A 115 EAARQGVDVEYEVGVTDIKFFGTDSVTTIEDINGNKREIEARFIIDA 161 (421)
T ss_dssp HHHHHTCEEECSEEEEEEEEETTEEEEEEEETTSCEEEEEEEEEEEC
T ss_pred HHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCCCEEEEEcCEEEEC
Confidence 33445899999999999999888777788888885457999999998
No 240
>4a9w_A Monooxygenase; baeyer-villiger, FAD, oxidoreductase; HET: FAD; 2.72A {Stenotrophomonas maltophilia}
Probab=98.36 E-value=3.8e-07 Score=114.60 Aligned_cols=39 Identities=33% Similarity=0.650 Sum_probs=36.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
++||+|||||++||+||+.|+++|+ +|+|+|+++.+||.
T Consensus 3 ~~~vvIIG~G~aGl~~A~~l~~~g~-~v~vie~~~~~gg~ 41 (357)
T 4a9w_A 3 SVDVVVIGGGQSGLSAGYFLRRSGL-SYVILDAEASPGGA 41 (357)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHSSC-CEEEECCSSSSSGG
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCCCCCCc
Confidence 5799999999999999999999999 69999999999984
No 241
>3ps9_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; rossmann fold, oxidase, methyl transferase, FAD; HET: FAD SAM; 2.54A {Escherichia coli} PDB: 3awi_A*
Probab=98.36 E-value=2.1e-06 Score=117.27 Aligned_cols=39 Identities=26% Similarity=0.327 Sum_probs=35.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
..+||+|||||++||+||+.|+++|. +|+|+||++.+|+
T Consensus 271 ~~~DVvIIGgGiaGlsaA~~La~~G~-~V~vlEk~~~~g~ 309 (676)
T 3ps9_A 271 SKREAAIIGGGIASALLSLALLRRGW-QVTLYCADEAPAL 309 (676)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSSSSC
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCcccc
Confidence 34799999999999999999999998 6999999988875
No 242
>2jq4_A AGR_C_4658P, hypothetical protein ATU2571; ATC2521, unknown function, ATC, S genomics, PSI-2, protein structure initiative; NMR {Agrobacterium tumefaciens} SCOP: a.28.1.1
Probab=98.35 E-value=4.7e-07 Score=90.68 Aligned_cols=78 Identities=8% Similarity=0.162 Sum_probs=67.6
Q ss_pred ChhHHHHHHHHHHHHHhCC--CCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCccccc--CcccHHHHHHHHHhh
Q 037878 1078 SNKDIVEFLKGLVSEQTGI--PITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIF--TATCIADLASFSENL 1153 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~--~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~--~~pti~~LA~~l~~~ 1153 (2280)
+.++++++|+++|+++++. +.++|+.+++|+++|.|||.+++|+..|.+.||++++..+++ ..+|++.|+++++..
T Consensus 19 ~~~~i~~~i~~il~~~l~~~v~~~~i~~d~~l~dlGlDSL~~veLv~~lE~~fgI~i~~~~l~~~~~~tv~~l~~~v~~~ 98 (105)
T 2jq4_A 19 FQGHMNATIREILAKFGQLPTPVDTIADEADLYAAGLSSFASVQLMLGIEEAFDIEFPDNLLNRKSFASIKAIEDTVKLI 98 (105)
T ss_dssp ----CHHHHHHHHHHTSCCSSCGGGCCTTSCGGGGTCCHHHHHHHHHHHHHHHSCCCCHHHHSSGGGGCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhccCCCcccCCCCCCHhhcCCCHHHHHHHHHHHHHHHCCCcCHHHhhhhhcCCHHHHHHHHHHH
Confidence 4567889999999999874 467899999999999999999999999999999999999998 789999999999875
Q ss_pred hh
Q 037878 1154 VM 1155 (2280)
Q Consensus 1154 ~~ 1155 (2280)
..
T Consensus 99 ~~ 100 (105)
T 2jq4_A 99 LD 100 (105)
T ss_dssp HH
T ss_pred hc
Confidence 53
No 243
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=98.35 E-value=1.2e-06 Score=119.86 Aligned_cols=40 Identities=33% Similarity=0.266 Sum_probs=36.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
.++||+|||||++|++||++|+++|. +|+||||++.+|+.
T Consensus 263 ~~~DVvIIGgGiaGlsaA~~La~~G~-~V~vlEk~~~~g~g 302 (689)
T 3pvc_A 263 RCDDIAIIGGGIVSALTALALQRRGA-VVTLYCADAQPAQG 302 (689)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHTTTC-CEEEEESSSSTTCS
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC-cEEEEeCCCccccc
Confidence 35799999999999999999999998 69999999888753
No 244
>3gwf_A Cyclohexanone monooxygenase; flavoprotein biocatalysis baeyer-villiger oxidation green CH monooxygenase, oxidoreductase; HET: FAD NAP; 2.20A {Rhodococcus SP} PDB: 3gwd_A* 3ucl_A*
Probab=98.32 E-value=7e-07 Score=117.73 Aligned_cols=41 Identities=22% Similarity=0.344 Sum_probs=37.6
Q ss_pred CCCeEEEECccHHHHHHHHHHH-hCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALA-KLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La-~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||++||+||+.|+ +.|+ +|+|+|+++.+||.+
T Consensus 7 ~~~dVvIIGaG~aGl~aA~~L~~~~G~-~v~viE~~~~~GGtw 48 (540)
T 3gwf_A 7 HTVDAVVIGAGFGGIYAVHKLHHELGL-TTVGFDKADGPGGTW 48 (540)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTCC-CEEEEESSSSSCTHH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHcCCC-CEEEEECCCCCCCcc
Confidence 3579999999999999999999 9998 699999999999954
No 245
>3rp8_A Flavoprotein monooxygenase; FAD-binding protein, oxidoreductase; HET: FAD; 1.97A {Klebsiella pneumoniae} PDB: 3rp7_A* 3rp6_A*
Probab=98.32 E-value=2.7e-06 Score=109.01 Aligned_cols=44 Identities=23% Similarity=0.338 Sum_probs=34.0
Q ss_pred cCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 14 LHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 14 ~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.+++.++++||+|||||++||++|+.|+++|+ +|+||||++..+
T Consensus 16 ~~~~~~~~~dV~IVGaG~aGl~~A~~La~~G~-~V~v~E~~~~~~ 59 (407)
T 3rp8_A 16 ENLYFQGHMKAIVIGAGIGGLSAAVALKQSGI-DCDVYEAVKEIK 59 (407)
T ss_dssp -------CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSCC-
T ss_pred CcccCCCCCEEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCCCCC
Confidence 34445567899999999999999999999999 699999987653
No 246
>1vku_A Acyl carrier protein; TM0175, structural genomics, JCSG, Pro structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: a.28.1.1
Probab=98.30 E-value=1.3e-06 Score=86.33 Aligned_cols=78 Identities=18% Similarity=0.277 Sum_probs=72.9
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhhc
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVMK 1156 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~~ 1156 (2280)
..++.++++++.+++++++++.|.++.+|.+||.|||.++.++..|.+.||+.++..++...+|+++|++++.+....
T Consensus 15 ~~~i~~~l~~ila~~l~v~~~~I~~d~~L~dLGlDSL~~veL~~~LE~~fgi~i~~~~l~~~~TV~~L~~~I~~~~~~ 92 (100)
T 1vku_A 15 RKKLIAKFVEIASEKMGKDLETVDEENTFKELGFDSIDVIDLVMFFEDEFALRIEDEEISKIRKVKDLIDIVIKKLEE 92 (100)
T ss_dssp HHHHHHHHHHHHHHTTCCCCCSCCTTSBTTTTTCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCBHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHCCCCCCHHHcCCchHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHHHhhh
Confidence 567889999999999999989999999999999999999999999999999999999999999999999999876543
No 247
>1qo8_A Flavocytochrome C3 fumarate reductase; oxidoreductase; HET: HEM FAD; 2.15A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1
Probab=98.29 E-value=1.7e-06 Score=115.48 Aligned_cols=41 Identities=34% Similarity=0.526 Sum_probs=37.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
..+.||+|||||++||+||+.|+++|. +|+||||.+.+||.
T Consensus 119 ~~~~DVvVVG~G~aGl~aA~~la~~G~-~V~vlEk~~~~gg~ 159 (566)
T 1qo8_A 119 SETTQVLVVGAGSAGFNASLAAKKAGA-NVILVDKAPFSGGN 159 (566)
T ss_dssp SEEEEEEEECCSHHHHHHHHHHHHHTC-CEEEECSSSSSCTT
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCCCCCc
Confidence 345799999999999999999999998 69999999999884
No 248
>2qa1_A PGAE, polyketide oxygenase PGAE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 1.80A {Streptomyces}
Probab=98.29 E-value=2.7e-06 Score=111.43 Aligned_cols=43 Identities=28% Similarity=0.400 Sum_probs=35.9
Q ss_pred CCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 15 HPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 15 ~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
+.++++++||+|||||++||++|+.|+++|+ +|+||||++..+
T Consensus 5 ~~~~~~~~dVlIVGaGpaGl~~A~~La~~G~-~v~vlE~~~~~~ 47 (500)
T 2qa1_A 5 HHHHRSDAAVIVVGAGPAGMMLAGELRLAGV-EVVVLERLVERT 47 (500)
T ss_dssp ---CCSBCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCCC-C
T ss_pred cCCccCCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCCCC
Confidence 4455677899999999999999999999999 699999987764
No 249
>3uox_A Otemo; baeyer-villiger monooxygenase, oxidoreductase; HET: FAD; 1.96A {Pseudomonas putida} PDB: 3uov_A* 3uoy_A* 3uoz_A* 3up4_A* 3up5_A*
Probab=98.27 E-value=1.7e-06 Score=114.17 Aligned_cols=41 Identities=24% Similarity=0.413 Sum_probs=37.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||++||+||+.|++.|+ +|+|+|+++.+||.+
T Consensus 8 ~~~dVvIIGaG~aGl~aA~~L~~~g~-~v~iiE~~~~~GGtw 48 (545)
T 3uox_A 8 PALDAVVIGAGVTGIYQAFLINQAGM-KVLGIEAGEDVGGTW 48 (545)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTHH
T ss_pred CCCCEEEECccHHHHHHHHHHHhCCC-CEEEEeCCCCCCCcc
Confidence 45799999999999999999999999 699999999999953
No 250
>2oln_A NIKD protein; flavoprotein, rossmann fold, oxidoreductase; HET: FAD; 1.15A {Streptomyces tendae} PDB: 2olo_A* 3hzl_A* 2q6u_A*
Probab=98.27 E-value=2e-06 Score=109.93 Aligned_cols=38 Identities=37% Similarity=0.596 Sum_probs=34.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.+.||+|||||++||+||+.|+++|. +|+|+||++..+
T Consensus 3 ~~~DVvIIGaG~~Gl~~A~~La~~G~-~V~vlE~~~~~~ 40 (397)
T 2oln_A 3 ESYDVVVVGGGPVGLATAWQVAERGH-RVLVLERHTFFN 40 (397)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCCC
Confidence 35799999999999999999999998 699999987654
No 251
>1vg0_A RAB proteins geranylgeranyltransferase component A 1; RAB prenylation, post-translational modification, protein binding/protein transport complex; HET: GER GDP PG4; 2.20A {Rattus norvegicus} SCOP: c.3.1.3 d.16.1.6 PDB: 1vg9_A* 1ltx_R*
Probab=98.27 E-value=6.4e-06 Score=108.10 Aligned_cols=50 Identities=22% Similarity=0.266 Sum_probs=45.3
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEEEeec
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCESVEIE 67 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t~~~~ 67 (2280)
.|++++||+|||+|+.|...|..|++.|. +|+++||+++.||.+.+..++
T Consensus 4 ~~~~~~D~~i~GtGl~~~~~a~~~~~~g~-~vl~id~~~~~gg~~~~~~l~ 53 (650)
T 1vg0_A 4 NLPSDFDVIVIGTGLPESIIAAACSRSGQ-RVLHVDSRSYYGGNWASFSFS 53 (650)
T ss_dssp CCCSBCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCGGGCEECHH
T ss_pred cCCCcCCEEEECCcHHHHHHHHHHHhCCC-EEEEEcCCCcccCccccccHH
Confidence 45567999999999999999999999998 699999999999999998733
No 252
>1y0p_A Fumarate reductase flavoprotein subunit; flavocytochrome, mesaconate, oxidoreductase; HET: HEM FAD; 1.50A {Shewanella frigidimarina} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1qjd_A* 2b7s_A* 1jry_A* 2b7r_A* 1ksu_A* 1jrz_A* 1jrx_A* 1m64_A* 1p2h_A* 1p2e_A* 1kss_A* 1e39_A* 1q9i_A* 1lj1_A*
Probab=98.26 E-value=2.4e-06 Score=114.29 Aligned_cols=42 Identities=31% Similarity=0.477 Sum_probs=38.0
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
..+.||+|||||++||+||+.|+++|. +|+|+||.+.+||..
T Consensus 124 ~~~~DVvVVGaG~aGl~aA~~la~~G~-~V~vlEk~~~~gg~s 165 (571)
T 1y0p_A 124 HDTVDVVVVGSGGAGFSAAISATDSGA-KVILIEKEPVIGGNA 165 (571)
T ss_dssp SEECSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTTG
T ss_pred CCCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCCCCCch
Confidence 345799999999999999999999998 699999999998853
No 253
>3st8_A Bifunctional protein GLMU; acetyltransferase, pyrophosphorylase, rossmann fold, LEFT-handed-beta-helix, cell shape; HET: COA GP1 UD1; 1.98A {Mycobacterium tuberculosis} PDB: 3spt_A* 3foq_A 3dk5_A 3d8v_A 3d98_A* 3dj4_A 2qkx_A*
Probab=98.23 E-value=2.5e-06 Score=111.98 Aligned_cols=80 Identities=20% Similarity=0.338 Sum_probs=56.4
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCC-------CcEeCC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLP-------NSVVSR 1645 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~-------g~~ig~ 1645 (2280)
|+.||++|.|+..+.+.. +.||+++.|++.+.+ +.+.||++|.||+++++.. +++|||
T Consensus 352 ~~~i~~~v~IG~~v~ik~---s~Ig~gskI~~~~~i------------~d~~Ig~~v~IG~g~i~~n~dg~~~~~t~IGd 416 (501)
T 3st8_A 352 GTALGADGKLGAFVEVKN---STIGTGTKVPHLTYV------------GDADIGEYSNIGASSVFVNYDGTSKRRTTVGS 416 (501)
T ss_dssp TCEECTTCEEEETEEEES---CEECTTCEEEESCEE------------ESEEECSSCEECTTCEEECBCSSSBCCEEECT
T ss_pred CcEEccccccCCeEEEcc---ceecCCcEEecccee------------cCceEcCCCEECCCEEEEcccCCcccCCEECC
Confidence 467777777777644433 778888888777777 6678999999999887743 477888
Q ss_pred CcEEccCccccCCCccCCCcEE
Q 037878 1646 DVILGALSVAPMHSVLQRGGIY 1667 (2280)
Q Consensus 1646 ~~~vg~~s~v~~~~~v~~~~~~ 1667 (2280)
||.||.+|.+...-.|-+|+..
T Consensus 417 ~~~iG~~~~l~~~v~Ig~~~~i 438 (501)
T 3st8_A 417 HVRTGSDTMFVAPVTIGDGAYT 438 (501)
T ss_dssp TCEECTTCEEESSEEECTTCEE
T ss_pred CcEECCCCEEcCCcEECCCCEE
Confidence 8888888877644333444433
No 254
>2uzz_A N-methyl-L-tryptophan oxidase; N-methyltryptophan oxidase (MTOX), oxidative demethylation of N-methyl-L-tryptophan, FAD, flavoenzyme; HET: FAD; 3.2A {Escherichia coli}
Probab=98.23 E-value=1.8e-06 Score=109.14 Aligned_cols=38 Identities=21% Similarity=0.350 Sum_probs=34.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||++|+++|++|+++|. +|+|+||++..+|
T Consensus 2 ~~dvvIIG~Gi~Gl~~A~~La~~G~-~V~vle~~~~~~~ 39 (372)
T 2uzz_A 2 KYDLIIIGSGSVGAAAGYYATRAGL-NVLMTDAHMPPHQ 39 (372)
T ss_dssp CEEEEESCTTHHHHHHHHHHHHTTC-CEEEECSSCSSSS
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCC
Confidence 4699999999999999999999998 6999999887765
No 255
>2rij_A Putative 2,3,4,5-tetrahydropyridine-2-carboxylate succinyltransferase; structural genomics, joint center for structural genomics; HET: MSE CIT; 1.90A {Campylobacter jejuni}
Probab=98.22 E-value=1.1e-06 Score=106.79 Aligned_cols=89 Identities=21% Similarity=0.260 Sum_probs=61.0
Q ss_pred cCCEECCCcEECcc-ccCCCCce---------EECCCCEeCCCCEEeeccccCCce---eecCEEECCCcEECCCCEECC
Q 037878 1316 LGAKLGSSVLLDTV-DITDPSLV---------LIGDGAVISEGALIQSHEVKNGVL---SFQPIKIARKVSVGPYAVIQK 1382 (2280)
Q Consensus 1316 lGa~Ig~~v~i~~~-~~~~~~~~---------~IG~~~~I~~~~~l~~~~~~~~~~---~~~~i~Ig~~~~iG~~~~i~p 1382 (2280)
.+++||+++.|... ....++-. +||++|.||++|.|+.+....+.+ ..++++||++|+||++|+ +
T Consensus 228 ~~a~IG~gv~Ig~g~a~Ig~nv~vIG~~~I~~~Ig~~vvIGdnv~Ig~ga~I~g~l~g~~~~~VvIGdnv~IGagAv--~ 305 (387)
T 2rij_A 228 MGASLAAGTTIMPGASYVNFNAGTTGACMVEGRISSSAIVGEGSDVGGGASILGVLSGTSGNAISVGKACLLGANSV--T 305 (387)
T ss_dssp TTCBCCTTCEECSSSCEECTTCEESSCCEECSEECTTCEECTTCEECTTCEECCBCSSTTCCBCEECTTCEECTTCE--E
T ss_pred CCeEEcCCCEEeCCeeEECCCcEEECCEEEeeEECCCCEECCCCEECCCceEcceecCCCccCeEEeCCCEECCCCc--C
Confidence 45777777777542 21122222 556666666666666554322211 234699999999999999 9
Q ss_pred CCEECCCCEECcCCccCCCCcccc
Q 037878 1383 GSVIGEEAEVAPLQKSEGGKPILK 1406 (2280)
Q Consensus 1383 g~~ig~~a~ig~~s~v~~~~~~~~ 1406 (2280)
|++||+||+||++|+|..+..++.
T Consensus 306 GV~IGdgavIGAGsVVt~dv~i~~ 329 (387)
T 2rij_A 306 GIPLGDNCIVDAGIAVLEGTKFLL 329 (387)
T ss_dssp CSCBCTTCEECTTCEECTTCEEEE
T ss_pred CcEECCCCEECCCCEECCCceeee
Confidence 999999999999999988877754
No 256
>4hb9_A Similarities with probable monooxygenase; flavin, structural genomics, NEW YORK structural genomics RE consortium, nysgrc, PSI; HET: MSE FAD; 1.93A {Photorhabdus luminescens}
Probab=98.21 E-value=9.1e-07 Score=113.54 Aligned_cols=50 Identities=16% Similarity=0.193 Sum_probs=40.2
Q ss_pred HHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 189 TSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 189 ~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
..|.+.|.+.++.+|+++++|++++..+++. ++++..+| ++++||.||-|
T Consensus 112 ~~L~~~L~~~~~~~v~~~~~v~~~~~~~~~~-v~v~~~dG--~~~~adlvVgA 161 (412)
T 4hb9_A 112 TELKEILNKGLANTIQWNKTFVRYEHIENGG-IKIFFADG--SHENVDVLVGA 161 (412)
T ss_dssp HHHHHHHHTTCTTTEECSCCEEEEEECTTSC-EEEEETTS--CEEEESEEEEC
T ss_pred HHHHHHHHhhccceEEEEEEEEeeeEcCCCe-EEEEECCC--CEEEeeEEEEC
Confidence 3456667777888899999999998865542 57788899 57899999998
No 257
>4ap3_A Steroid monooxygenase; oxidoreductase, baeyer-villiger; HET: FAD NAP; 2.39A {Rhodococcus rhodochrous} PDB: 4aox_A* 4aos_A* 4ap1_A*
Probab=98.21 E-value=2.6e-06 Score=112.61 Aligned_cols=41 Identities=27% Similarity=0.414 Sum_probs=37.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.++||+|||||++|++||+.|++.|+ +|+|+|+++.+||.+
T Consensus 20 ~~~dVvIIGaG~aGl~aA~~L~~~G~-~v~iiE~~~~~GGtw 60 (549)
T 4ap3_A 20 TSYDVVVVGAGIAGLYAIHRFRSQGL-TVRAFEAASGVGGVW 60 (549)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTHH
T ss_pred CCCCEEEECchHHHHHHHHHHHhCCC-CEEEEeCCCCCCCcc
Confidence 35699999999999999999999999 699999999999954
No 258
>1y56_B Sarcosine oxidase; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=98.21 E-value=5.3e-06 Score=105.32 Aligned_cols=38 Identities=39% Similarity=0.624 Sum_probs=34.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
.++||+|||||++|+++|++|+++|+ +|+|+||++ +|+
T Consensus 4 ~~~dVvIIGgGi~Gl~~A~~La~~G~-~V~lle~~~-~~~ 41 (382)
T 1y56_B 4 EKSEIVVIGGGIVGVTIAHELAKRGE-EVTVIEKRF-IGS 41 (382)
T ss_dssp SBCSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSS-TTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCC-CCC
Confidence 46799999999999999999999998 699999984 554
No 259
>2gag_B Heterotetrameric sarcosine oxidase beta-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_B* 1x31_B* 1vrq_B* 3ad7_B* 3ad8_B* 3ad9_B* 3ada_B*
Probab=98.21 E-value=4.7e-06 Score=106.64 Aligned_cols=38 Identities=53% Similarity=0.637 Sum_probs=33.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-CC-CCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAK-LG-YRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~-~G-~~~VtVlEk~~riG 58 (2280)
.++||+|||||++|+++|++|++ +| . +|+|+||++..+
T Consensus 20 ~~~dVvIIG~G~~Gl~~A~~La~~~G~~-~V~vlE~~~~~~ 59 (405)
T 2gag_B 20 KSYDAIIVGGGGHGLATAYFLAKNHGIT-NVAVLEKGWLAG 59 (405)
T ss_dssp SEEEEEEECCSHHHHHHHHHHHHHHCCC-CEEEECSSSTTC
T ss_pred CcCCEEEECcCHHHHHHHHHHHHhcCCC-cEEEEeCCCCCC
Confidence 35799999999999999999999 99 8 699999988433
No 260
>3cgv_A Geranylgeranyl reductase related protein; NP_393992.1, geranylgeranyl bacteriochlorophyll reductase- like FIXC homolog; HET: MSE FAD UNL; 1.60A {Thermoplasma acidophilum dsm 1728} PDB: 3oz2_A*
Probab=98.20 E-value=1.2e-06 Score=111.85 Aligned_cols=39 Identities=33% Similarity=0.551 Sum_probs=35.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+++||+|||||++||++|+.|+++|+ +|+|+|+++.+|+
T Consensus 3 ~~~dVvIvG~G~aGl~~A~~La~~G~-~V~l~E~~~~~g~ 41 (397)
T 3cgv_A 3 ETYDVLVVGGGPGGSTAARYAAKYGL-KTLMIEKRPEIGS 41 (397)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSTTC
T ss_pred ccCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCCCCC
Confidence 35799999999999999999999999 6999999987776
No 261
>1ryi_A Glycine oxidase; flavoprotein, protein-inhibitor complex, oxidoreductase; HET: FAD; 1.80A {Bacillus subtilis} SCOP: c.3.1.2 d.16.1.3 PDB: 3if9_A* 1ng4_A* 1ng3_A*
Probab=98.19 E-value=2.1e-06 Score=108.94 Aligned_cols=40 Identities=33% Similarity=0.370 Sum_probs=35.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.++||+|||||++|+++|++|+++|. +|+|+|+++..+|
T Consensus 15 ~~~~dvvIIGgG~~Gl~~A~~La~~G~-~V~llE~~~~~~g 54 (382)
T 1ryi_A 15 KRHYEAVVIGGGIIGSAIAYYLAKENK-NTALFESGTMGGR 54 (382)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTTTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCCcc
Confidence 345799999999999999999999998 6999999876555
No 262
>3ihg_A RDME; flavoenzyme, anthracycline, polyketide biosynthesis, merohedral twinning, enzyme mechanism, hydroxylase, flavoprotein; HET: FAD VAK; 2.49A {Streptomyces purpurascens}
Probab=98.19 E-value=2.9e-06 Score=112.70 Aligned_cols=38 Identities=34% Similarity=0.477 Sum_probs=34.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.+.||+|||||++||++|+.|+++|+ +|+||||++..+
T Consensus 4 ~~~dVlIVGaG~aGl~~A~~La~~G~-~v~viEr~~~~~ 41 (535)
T 3ihg_A 4 HEVDVLVVGAGLGGLSTAMFLARQGV-RVLVVERRPGLS 41 (535)
T ss_dssp CSEEEEEECCSHHHHHHHHHHHTTTC-CEEEECSSSSCC
T ss_pred ccCcEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCCCC
Confidence 35799999999999999999999999 699999987654
No 263
>3i3l_A Alkylhalidase CMLS; flavin-dependent halogenase, chloramphenicol biosynthesis, halogenation reaction, structural genomics; HET: FAD; 2.20A {Streptomyces venezuelae}
Probab=98.19 E-value=4.4e-06 Score=111.04 Aligned_cols=43 Identities=30% Similarity=0.528 Sum_probs=35.7
Q ss_pred CCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 15 HPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 15 ~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
+..||+++||+|||||++|++||+.|+++|+ +|+|+|+.+..+
T Consensus 17 ~~~~M~~~DVvIVGgG~AGl~aA~~Lar~G~-~V~LiEr~~~~~ 59 (591)
T 3i3l_A 17 RGSHMTRSKVAIIGGGPAGSVAGLTLHKLGH-DVTIYERSAFPR 59 (591)
T ss_dssp ---CCCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCSSC
T ss_pred CcCcCCCCCEEEECcCHHHHHHHHHHHcCCC-CEEEEcCCCCCC
Confidence 3445567899999999999999999999999 699999986544
No 264
>2amw_A Hypothetical protein NE2163; all helical protein, structural genomics, PSI, protein structure initiative; NMR {Nitrosomonas europaea}
Probab=98.19 E-value=2.3e-06 Score=82.19 Aligned_cols=73 Identities=19% Similarity=0.318 Sum_probs=66.9
Q ss_pred HHHHHHHHHHHHhCCC--CccccCCCChh-hccc-chHHHHHHHHHHHHHhCCccCcccccC--cccHHHHHHHHHhhh
Q 037878 1082 IVEFLKGLVSEQTGIP--ITKVSATDSLV-SYGI-DSIGVVRAAQKLSDFLGVPVGAVDIFT--ATCIADLASFSENLV 1154 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~--~~~i~~~~~Ff-~lGG-dSL~a~~l~~~l~~~~g~~l~~~di~~--~pti~~LA~~l~~~~ 1154 (2280)
+++.++++++++++++ ++.++.+++|+ ++|+ |||.+++++..+.++||++++..+++. .+|+++|++++.+..
T Consensus 3 i~~~l~~il~~~l~~~~~~~~i~~d~~l~~dlg~~DSl~~~elv~~lE~~fgi~i~~~~l~~~~~~Tv~~l~~~i~~~~ 81 (83)
T 2amw_A 3 HLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHKL 81 (83)
T ss_dssp THHHHHHHHHHHTTCGGGGGSCCTTSCSTTTSTTTTHHHHHHHHHHHHHHTTCCCCTTTCCGGGSSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCCccccCCCcchhhhccCccCHHHHHHHHHHHHHHhCCeeCHHhhhHHhcCCHHHHHHHHHHHh
Confidence 4578999999999998 67899999999 7999 999999999999999999999999887 999999999997643
No 265
>2gf3_A MSOX, monomeric sarcosine oxidase; flavoprotein oxidase, inhibitor 2-furoic acid, oxidoreductas; HET: FAD; 1.30A {Bacillus SP} SCOP: c.3.1.2 d.16.1.3 PDB: 1el7_A* 1el8_A* 1el9_A* 1eli_A* 1l9e_A* 2a89_A* 2gb0_A* 1el5_A* 3qse_A* 3qsm_A* 3qss_A* 3bhk_A* 3bhf_A* 3m12_A* 3m13_A* 3m0o_A* 1l9c_A* 1l9d_A* 1zov_A*
Probab=98.18 E-value=1.5e-06 Score=110.69 Aligned_cols=37 Identities=27% Similarity=0.534 Sum_probs=34.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
++||+|||||++|+++|++|+++|+ +|+|+|+++..+
T Consensus 3 ~~dvvIIGaG~~Gl~~A~~La~~G~-~V~vie~~~~~~ 39 (389)
T 2gf3_A 3 HFDVIVVGAGSMGMAAGYQLAKQGV-KTLLVDAFDPPH 39 (389)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCSSC
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCCC
Confidence 5799999999999999999999998 699999987665
No 266
>2qa2_A CABE, polyketide oxygenase CABE; FAD, angucycline, aromatic hydroxylase, oxidored; HET: FAD; 2.70A {Streptomyces}
Probab=98.16 E-value=6.8e-06 Score=107.58 Aligned_cols=54 Identities=15% Similarity=0.120 Sum_probs=41.1
Q ss_pred CHHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 187 GYTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 187 G~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
-+..+....+++.|.+|+++++|++++.+++++.+.+.+.+| .++++||.||.|
T Consensus 108 ~l~~~L~~~~~~~gv~v~~~~~v~~i~~~~~~v~v~~~~~~g-~~~~~a~~vVgA 161 (499)
T 2qa2_A 108 TTESVLEEWALGRGAELLRGHTVRALTDEGDHVVVEVEGPDG-PRSLTTRYVVGC 161 (499)
T ss_dssp HHHHHHHHHHHHTTCEEEESCEEEEEEECSSCEEEEEECSSC-EEEEEEEEEEEC
T ss_pred HHHHHHHHHHHhCCCEEEcCCEEEEEEEeCCEEEEEEEcCCC-cEEEEeCEEEEc
Confidence 344445454556789999999999999988887666665555 357999999998
No 267
>4dxe_H ACP, acyl carrier protein; acyl-carrier-protein synthase, type II acid synthesis pathway; 2.51A {Staphylococcus aureus}
Probab=98.16 E-value=1.9e-06 Score=85.32 Aligned_cols=73 Identities=18% Similarity=0.326 Sum_probs=68.5
Q ss_pred hHHHHHHHHHHHHHhCCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHh
Q 037878 1080 KDIVEFLKGLVSEQTGIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSEN 1152 (2280)
Q Consensus 1080 ~~~e~~l~~iw~~vLg~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~ 1152 (2280)
.++.+.|++++++++++++++|.++.+| .+||.|||.++.++..|++.||++++..++...+|+++|++++.+
T Consensus 25 mei~~~l~~iiae~l~~~~~~I~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~Tv~dl~~~I~~ 98 (101)
T 4dxe_H 25 MENFDKVKDIIVDRLGVDADKVTEDASFKDDLGADSLDIAELVMELEDEFGTEIPDEEAEKINTVGDAVKFINS 98 (101)
T ss_dssp TTHHHHHHHHHHHTTCCCGGGCCTTCBTTTTSCCCHHHHHHHHHHHHHHTTCCCCHHHHTTCCBHHHHHHHHC-
T ss_pred HHHHHHHHHHHHHHHCcChhhCCCCCcchhhcCCCcHHHHHHHHHHHHHHCCCCCHHHHHcCCCHHHHHHHHHH
Confidence 4678899999999999999999999999 799999999999999999999999999999999999999999864
No 268
>4at0_A 3-ketosteroid-delta4-5alpha-dehydrogenase; oxidoreductase, dehydogenase, steroid catabolism; HET: FAD; 1.60A {Rhodococcus jostii} PDB: 4at2_A*
Probab=98.16 E-value=1.1e-05 Score=106.33 Aligned_cols=41 Identities=24% Similarity=0.416 Sum_probs=37.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+.||+|||||++||+||+.|+++|. +|+|+||.+..||.+
T Consensus 40 ~~~DVvVVGaG~AGl~AA~~aa~~G~-~V~vlEk~~~~GG~s 80 (510)
T 4at0_A 40 YEADVVVAGYGIAGVAASIEAARAGA-DVLVLERTSGWGGAT 80 (510)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTTG
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCCCCCCcc
Confidence 45799999999999999999999998 699999999999854
No 269
>2cg5_B Fatty acid synthase; transferase-hydrolase complex, transferase/hydrolase (comple fatty acid biosynthesis, phosphopantetheine transferase; HET: COA; 2.7A {Homo sapiens} PDB: 2png_A
Probab=98.16 E-value=2.4e-06 Score=81.95 Aligned_cols=69 Identities=22% Similarity=0.276 Sum_probs=62.9
Q ss_pred HHHHHHHHHHhCCC-CccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1084 EFLKGLVSEQTGIP-ITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1084 ~~l~~iw~~vLg~~-~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
+.+++..+++||++ ++.|.++.+|.+||.|||.++.+.++|++.||+.++..+++. +|+.+|++.+...
T Consensus 9 ~~v~~~va~iLg~~~~~~I~~~~~l~dLG~DSL~aVELr~~Le~~fgi~lp~~~l~~-~Ti~~La~~v~~~ 78 (91)
T 2cg5_B 9 RDLVEAVAHILGIRDLAAVNLDSSLADLGLDALMSVEVRQTLERELNLVLSVREVRQ-LTLRKLQELSSKA 78 (91)
T ss_dssp TTHHHHHHHHTTCCSCTTSCTTSBTTTTTCCHHHHHHHHHHHHHHHCCCCCHHHHHT-CBHHHHHHHHHCC
T ss_pred HHHHHHHHHHHCCCchhhCCCCCCHHHhCCcchHHHHHHHHHHHHHCCCCCHHHHHh-CCHHHHHHHHhcc
Confidence 36788899999996 478999999999999999999999999999999999999988 6999999998753
No 270
>2gv8_A Monooxygenase; FMO, FAD, NADPH, cofactor complex, PSI, structura genomics, protein structure initiative; HET: FAD NDP; 2.10A {Schizosaccharomyces pombe} SCOP: c.3.1.5 c.3.1.5 PDB: 2gvc_A* 1vqw_A*
Probab=98.15 E-value=3.8e-06 Score=108.87 Aligned_cols=43 Identities=44% Similarity=0.617 Sum_probs=38.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~riGG~~ 61 (2280)
++.+||+|||||++||+||..|++.|.. +|+|||+++.+||.+
T Consensus 4 ~~~~dV~IIGaG~aGl~aA~~L~~~G~~~~V~v~E~~~~~GG~~ 47 (447)
T 2gv8_A 4 PTIRKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGSPGGVW 47 (447)
T ss_dssp CSCCEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSSSSTTC
T ss_pred CCCCEEEEECccHHHHHHHHHHHhcCCCCCeEEEecCCCCCCee
Confidence 4468999999999999999999999971 499999999999854
No 271
>3alj_A 2-methyl-3-hydroxypyridine-5-carboxylic acid OXYG; alpha/beta fold, oxidoreductase; HET: FAD; 1.48A {Mesorhizobium loti} PDB: 3alh_A* 3ali_A* 3gmb_A* 3gmc_A* 3alk_A* 3alm_A* 3all_A*
Probab=98.15 E-value=7.7e-06 Score=103.63 Aligned_cols=40 Identities=35% Similarity=0.529 Sum_probs=35.2
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
|+++||+|||||++||++|+.|+++|+ +|+|+|+++..++
T Consensus 9 m~~~dVvIVGaG~aGl~~A~~L~~~G~-~v~viE~~~~~~~ 48 (379)
T 3alj_A 9 GKTRRAEVAGGGFAGLTAAIALKQNGW-DVRLHEKSSELRA 48 (379)
T ss_dssp --CCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSCCC
T ss_pred CCCCeEEEECCCHHHHHHHHHHHHCCC-CEEEEecCCCCCC
Confidence 446899999999999999999999998 6999999887764
No 272
>2vou_A 2,6-dihydroxypyridine hydroxylase; oxidoreductase, aromatic hydroxylase, nicotine degradation, mono-oxygenase; HET: FAD; 2.6A {Arthrobacter nicotinovorans} SCOP: c.3.1.2 d.16.1.2
Probab=98.14 E-value=1.1e-05 Score=103.04 Aligned_cols=37 Identities=35% Similarity=0.549 Sum_probs=33.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+++||+|||||++||++|+.|+++|+ +|+|+||++..
T Consensus 4 ~~~~V~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~ 40 (397)
T 2vou_A 4 TTDRIAVVGGSISGLTAALMLRDAGV-DVDVYERSPQP 40 (397)
T ss_dssp CCSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCCcEEEECCCHHHHHHHHHHHhCCC-CEEEEecCCCC
Confidence 45799999999999999999999999 69999998764
No 273
>3c96_A Flavin-containing monooxygenase; FAD, oxidoreductase, PF01266, NESG, PAR240, structural genomics, PSI-2; HET: FAD; 1.90A {Pseudomonas aeruginosa PAO1} SCOP: c.3.1.2 d.16.1.2 PDB: 2rgj_A*
Probab=98.12 E-value=1e-05 Score=103.58 Aligned_cols=41 Identities=39% Similarity=0.468 Sum_probs=35.1
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCc-eEEEecCCCCCc
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRN-VTLLEKYHTVGG 59 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~-VtVlEk~~riGG 59 (2280)
|++++||+|||||++||++|+.|+++|+ + |+|+||++.++.
T Consensus 1 M~~~~dVvIVGaG~aGl~~A~~L~~~G~-~~v~v~E~~~~~~~ 42 (410)
T 3c96_A 1 MSEPIDILIAGAGIGGLSCALALHQAGI-GKVTLLESSSEIRP 42 (410)
T ss_dssp ---CCEEEEECCSHHHHHHHHHHHHTTC-SEEEEEESSSSCCC
T ss_pred CCCCCeEEEECCCHHHHHHHHHHHhCCC-CeEEEEECCCCccc
Confidence 4556899999999999999999999998 8 999999887653
No 274
>2lte_A Specialized acyl carrier protein; APO protein, transferase; NMR {Pseudomonas aeruginosa}
Probab=97.41 E-value=3.4e-07 Score=91.25 Aligned_cols=72 Identities=19% Similarity=0.259 Sum_probs=68.6
Q ss_pred HHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1082 IVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
+++.|+++++++|++++++|+++++|.+||.|||.+++++..|++.||++++..++++.+|+++|++++.+.
T Consensus 27 i~~~l~~ila~~l~i~~~~I~~d~~l~dLGlDSL~~veL~~~lE~~fgi~i~~~~l~~~~TV~~l~~~I~~~ 98 (103)
T 2lte_A 27 MEDHLLTVLSVASGVPKEEISRDSRMEDLAFDSLVVSELSLKLRKEFGVTGVDDELDLLETVDELFQLVEKH 98 (103)
Confidence 788999999999999888999999999999999999999999999999999999999999999999998764
No 275
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=98.12 E-value=4e-06 Score=105.49 Aligned_cols=43 Identities=23% Similarity=0.459 Sum_probs=37.8
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
|++++||+|||||++||+||++|+++|+ +|+|+|+++.+||.+
T Consensus 11 ~~~~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~~~gg~~ 53 (360)
T 3ab1_A 11 HHDMRDLTIIGGGPTGIFAAFQCGMNNI-SCRIIESMPQLGGQL 53 (360)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCHHH
T ss_pred cCCCCCEEEECCCHHHHHHHHHHHhCCC-CEEEEecCCCCCCcc
Confidence 4556899999999999999999999999 699999999999844
No 276
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=98.10 E-value=2.6e-06 Score=105.24 Aligned_cols=37 Identities=24% Similarity=0.326 Sum_probs=34.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
++||+|||||++||+||+.|+++|+ +|+|+|++ +||.
T Consensus 15 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~--~gg~ 51 (323)
T 3f8d_A 15 KFDVIIVGLGPAAYGAALYSARYML-KTLVIGET--PGGQ 51 (323)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS--TTGG
T ss_pred ccCEEEECccHHHHHHHHHHHHCCC-cEEEEecc--CCCe
Confidence 5799999999999999999999998 69999998 8884
No 277
>2kw2_A Specialized acyl carrier protein; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Rhodopseudomonas palustris} PDB: 2ll8_A* 2lpk_A 3lmo_A
Probab=98.10 E-value=1.9e-06 Score=85.97 Aligned_cols=75 Identities=17% Similarity=0.281 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCccc------c-----cCcccHHHHHH
Q 037878 1081 DIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVD------I-----FTATCIADLAS 1148 (2280)
Q Consensus 1081 ~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~d------i-----~~~pti~~LA~ 1148 (2280)
++.+++++++++++++++++|..+++|+ +||.|||.++.++..|.+.||+.++..+ + |++||+++|++
T Consensus 3 ~i~~~v~~ii~~~l~~~~~~i~~d~~l~~dLGlDSL~~veLi~~lE~~fgi~i~~~~l~~~~~~~~~~T~~~~Tv~~l~~ 82 (101)
T 2kw2_A 3 STFDRVATIIAETCDIPRETITPESHAIDDLGIDSLDFLDIAFAIDKAFGIKLPLEKWTQEVNDGKATTEQYFVLKNLAA 82 (101)
T ss_dssp CHHHHHHHHHHHHHCCCGGGCCTTCBCCCCCCCCHHHHHHHHHHHHHHTTCCCCHHHHHHHHHTTSSCHHHHHBHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCHhhCCCCcchHHhcCCCHHHHHHHHHHHHHHHCCccCHHHhcchhhhhhccCCCcCcHHHHHH
Confidence 4567899999999999988999999995 9999999999999999999999998876 4 66666999999
Q ss_pred HHHhhhh
Q 037878 1149 FSENLVM 1155 (2280)
Q Consensus 1149 ~l~~~~~ 1155 (2280)
++.+...
T Consensus 83 ~i~~~~~ 89 (101)
T 2kw2_A 83 RIDELVA 89 (101)
T ss_dssp HHHHHHH
T ss_pred HHHHHhc
Confidence 9987553
No 278
>3e1t_A Halogenase; flavoprotein; HET: FAD; 2.05A {Chondromyces crocatus}
Probab=98.10 E-value=4.1e-06 Score=110.42 Aligned_cols=51 Identities=14% Similarity=0.105 Sum_probs=39.1
Q ss_pred HHHHHHhHCCCceEeCcceEEEEEcCCccE-EEEEeCCCceEEEEeCEEEEc
Q 037878 191 LWQKLSKYLPTEVHCNSEVLAIRRDSTTVG-VDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 191 l~~~la~~lg~~I~l~t~V~~I~~~~~~v~-V~v~t~~G~~~~i~aD~VI~A 241 (2280)
.+...+++.|++|+++++|++|..+++++. +.+.+.+|+.++++||.||.|
T Consensus 116 ~L~~~a~~~Gv~i~~~~~V~~v~~~~~~v~gv~~~~~dG~~~~i~ad~VI~A 167 (512)
T 3e1t_A 116 MLLRNSERKGVDVRERHEVIDVLFEGERAVGVRYRNTEGVELMAHARFIVDA 167 (512)
T ss_dssp HHHHHHHHTTCEEESSCEEEEEEEETTEEEEEEEECSSSCEEEEEEEEEEEC
T ss_pred HHHHHHHhCCCEEEcCCEEEEEEEECCEEEEEEEEeCCCCEEEEEcCEEEEC
Confidence 333334456899999999999999877653 566677785558999999998
No 279
>1w4x_A Phenylacetone monooxygenase; baeyer-villiger, FAD; HET: FAD; 1.7A {Thermobifida fusca} SCOP: c.3.1.5 c.3.1.5 PDB: 2ylr_A* 2yls_A* 2ylt_A* 2ym1_A* 2ylw_A* 2ym2_A* 2ylx_A* 2ylz_A*
Probab=98.09 E-value=9.3e-06 Score=107.70 Aligned_cols=42 Identities=38% Similarity=0.621 Sum_probs=38.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.+.||+|||||++||+||+.|+++|+ +|+|+|+++.+||.+
T Consensus 14 ~~~~dVvIIGaG~aGl~aA~~L~~~G~-~v~iiE~~~~~GG~w 55 (542)
T 1w4x_A 14 PEEVDVLVVGAGFSGLYALYRLRELGR-SVHVIETAGDVGGVW 55 (542)
T ss_dssp CSEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCTHH
T ss_pred CCCCCEEEECccHHHHHHHHHHHhCCC-CEEEEeCCCCCCCcc
Confidence 345799999999999999999999999 699999999999954
No 280
>1d4d_A Flavocytochrome C fumarate reductase; oxidoreductase; HET: HEM FAD; 2.50A {Shewanella oneidensis} SCOP: a.138.1.3 c.3.1.4 d.168.1.1 PDB: 1d4e_A* 1d4c_A*
Probab=98.09 E-value=1.4e-05 Score=106.38 Aligned_cols=41 Identities=37% Similarity=0.490 Sum_probs=37.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.++||+|||||++||+||+.|+++|+ +|+|+||++.+||..
T Consensus 125 ~~~~v~viG~G~aG~~aa~~~~~~g~-~v~~~e~~~~~~~~~ 165 (572)
T 1d4d_A 125 ETTDVVIIGSGGAGLAAAVSARDAGA-KVILLEKEPIPGGNT 165 (572)
T ss_dssp EECSEEEECCSHHHHHHHHHHHSSSC-CEEEECSSSSSCTTG
T ss_pred CCCCEEEECCCHHHHHHHHHHHHCCC-cEEEEecCCCCCcch
Confidence 35699999999999999999999998 699999999999853
No 281
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=98.07 E-value=9.2e-06 Score=101.00 Aligned_cols=41 Identities=27% Similarity=0.496 Sum_probs=37.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+++||+|||||++||+||+.|+++|+ +|+|+|+++.+||.+
T Consensus 4 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~~~gg~~ 44 (335)
T 2zbw_A 4 DHTDVLIVGAGPTGLFAGFYVGMRGL-SFRFVDPLPEPGGQL 44 (335)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSCHHH
T ss_pred CcCcEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCCCCCCee
Confidence 45799999999999999999999998 699999999999844
No 282
>3fmw_A Oxygenase; mithramycin, baeyer-villiger, flavin binding protein, oxidoreductase; HET: FAD; 2.89A {Streptomyces argillaceus}
Probab=98.07 E-value=5.7e-06 Score=109.80 Aligned_cols=47 Identities=19% Similarity=0.174 Sum_probs=37.6
Q ss_pred HHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 194 KLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 194 ~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
..+++.|++|+++++|++|+.+++++.+.+++.+|+ ++++||.||.|
T Consensus 156 ~~a~~~gv~i~~~~~v~~l~~~~~~v~v~~~~~~G~-~~~~a~~vV~A 202 (570)
T 3fmw_A 156 EHAREAGAEIPRGHEVTRLRQDAEAVEVTVAGPSGP-YPVRARYGVGC 202 (570)
T ss_dssp HHHHHHTEECCBSCEEEECCBCSSCEEEEEEETTEE-EEEEESEEEEC
T ss_pred HHHHhCCCEEEeCCEEEEEEEcCCeEEEEEEeCCCc-EEEEeCEEEEc
Confidence 333445889999999999999888887666657773 57999999998
No 283
>3nlc_A Uncharacterized protein VP0956; FAD-binding protein, NESG, structural genomics, PSI-2, prote structure initiative; HET: FAD; 2.15A {Vibrio parahaemolyticus}
Probab=98.06 E-value=9.9e-06 Score=105.88 Aligned_cols=40 Identities=30% Similarity=0.497 Sum_probs=36.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++||+||+.|+++|+ +|+|+|+.+.++++.
T Consensus 107 ~~DVVIVGgGpaGL~aA~~La~~G~-kV~VlEr~~~~~~R~ 146 (549)
T 3nlc_A 107 TERPIVIGFGPCGLFAGLVLAQMGF-NPIIVERGKEVRERT 146 (549)
T ss_dssp CCCCEEECCSHHHHHHHHHHHHTTC-CCEEECSSCCHHHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-eEEEEEccCcccccc
Confidence 4799999999999999999999999 699999999887744
No 284
>3d1c_A Flavin-containing putative monooxygenase; NP_373108.1, struc genomics, joint center for structural genomics, JCSG; HET: FAD UNL; 2.40A {Staphylococcus aureus}
Probab=98.04 E-value=8.1e-06 Score=103.01 Aligned_cols=40 Identities=33% Similarity=0.606 Sum_probs=35.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+++||+|||||++||+||+.|++.|+++|+|+|+++ +||.
T Consensus 3 ~~~~vvIIGaG~aGl~aA~~l~~~g~~~v~lie~~~-~Gg~ 42 (369)
T 3d1c_A 3 QHHKVAIIGAGAAGIGMAITLKDFGITDVIILEKGT-VGHS 42 (369)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTCCCEEEECSSS-TTHH
T ss_pred ccCcEEEECcCHHHHHHHHHHHHcCCCcEEEEecCC-CCCc
Confidence 357999999999999999999999972399999998 9983
No 285
>2l4b_A Acyl carrier protein; infectious disease, human granulocytic anaplasmosis, ssgcid, structural genomics; NMR {Anaplasma phagocytophilum}
Probab=98.03 E-value=3.7e-06 Score=81.74 Aligned_cols=76 Identities=14% Similarity=0.183 Sum_probs=69.7
Q ss_pred hhHHHHHHHHHHHHHh---CCCCccccCCCCh-hhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1079 NKDIVEFLKGLVSEQT---GIPITKVSATDSL-VSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vL---g~~~~~i~~~~~F-f~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
..++.+++++++++++ ++++++|+.+++| -++|.|||.++.++..+.++||++++..++.+.+|+++|++++.+..
T Consensus 6 ~~~i~~~v~~~i~~~l~~~~~~~~~i~~d~~l~~dlglDSl~~vel~~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~~~~ 85 (88)
T 2l4b_A 6 SEEIKAQVMESVIGCLKLNDEQKQILSGTTNLAKDFNLDSLDFVDLIMSLEERFSLEISDEDAQKLETVDDICRYIASKS 85 (88)
T ss_dssp CHHHHHHHHHHHHHHHTCCHHHHHSCCTTSCTTTTTTCCHHHHHHHHHHHHHHTTCCCCHHHHHTCCSHHHHHHHHHHHS
T ss_pred HHHHHHHHHHHHHHHHhhCCCCHhhCCCCCchhhccCCcHHHHHHHHHHHHHHHCCCcCHHHHHHcCCHHHHHHHHHHhh
Confidence 4678899999999999 7777789999999 59999999999999999999999999999999999999999997643
No 286
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=98.03 E-value=3.3e-06 Score=105.09 Aligned_cols=41 Identities=29% Similarity=0.489 Sum_probs=35.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecC----CCCCce
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY----HTVGGM 60 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~----~riGG~ 60 (2280)
.+++||+|||||++||+||+.|+++|+ +|+|+|++ .++||.
T Consensus 20 ~~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~vie~~~~~~~~~gg~ 64 (338)
T 3itj_A 20 HVHNKVTIIGSGPAAHTAAIYLARAEI-KPILYEGMMANGIAAGGQ 64 (338)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCSSBTTBCTTCG
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEecCCCCCCCcCcc
Confidence 346799999999999999999999999 69999994 477773
No 287
>3da1_A Glycerol-3-phosphate dehydrogenase; NESG BHR167 Q9KDW6 X-RAY, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.70A {Bacillus halodurans}
Probab=98.03 E-value=8.4e-06 Score=108.20 Aligned_cols=40 Identities=23% Similarity=0.331 Sum_probs=36.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
.+.||+|||||++|+++|+.|+++|+ +|+|+||++..||.
T Consensus 17 ~~~DVvVIGgGi~Gl~~A~~La~~G~-~V~LlEk~d~~~Gt 56 (561)
T 3da1_A 17 KQLDLLVIGGGITGAGIALDAQVRGI-QTGLVEMNDFASGT 56 (561)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHTTTC-CEEEEESSSTTCSG
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-cEEEEECCCCCCCc
Confidence 45899999999999999999999999 69999999877764
No 288
>1dv5_A APO-DCP, APO-D-alanyl carrier protein; 3-helix bundle, transport protein; NMR {Lactobacillus casei} SCOP: a.28.1.3 PDB: 1hqb_A
Probab=98.02 E-value=8.6e-06 Score=77.38 Aligned_cols=73 Identities=19% Similarity=0.198 Sum_probs=67.6
Q ss_pred hHHHHHHHHHHHHHhCCCCccccCCCChhhcc-cchHHHHHHHHHHHHHhCCccCccccc--CcccHHHHHHHHHh
Q 037878 1080 KDIVEFLKGLVSEQTGIPITKVSATDSLVSYG-IDSIGVVRAAQKLSDFLGVPVGAVDIF--TATCIADLASFSEN 1152 (2280)
Q Consensus 1080 ~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lG-GdSL~a~~l~~~l~~~~g~~l~~~di~--~~pti~~LA~~l~~ 1152 (2280)
+++.+++++++++.++.++..+..+++|+++| .|||.+++++..|.++||++++..++. ..+|++++++++.+
T Consensus 3 ~~i~~~i~~il~~~~~~~~~~i~~d~~l~~~g~lDSl~~velv~~lE~~fgi~i~~~~~~~~~~~Tv~~l~~~i~~ 78 (80)
T 1dv5_A 3 EAIKNGVLDILADLTGSDDVKKNLDLNLFETGLLDSMGTVQLLLELQSQFGVDAPVSEFDRKEWDTPNKIIAKVEQ 78 (80)
T ss_dssp HHHHHHHHHHHHHHHTSSSTTTCSSCCSSTTSSCCSHHHHHHHHHHTTTSCCCCCCSSCCTTTTTSHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHhCCCcccCCCCcchhhccCcChHHHHHHHHHHHHHhCCcCCHHHcCHHhcCCHHHHHHHHHH
Confidence 56788999999999998877889999999999 999999999999999999999999988 89999999999875
No 289
>2l9f_A CALE8, meacp; transferase, acyl carrier protein; NMR {Micromonospora echinospora}
Probab=98.02 E-value=1.4e-05 Score=77.00 Aligned_cols=77 Identities=17% Similarity=0.298 Sum_probs=68.4
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcc-cccCcccHHHHHHHHHhhhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAV-DIFTATCIADLASFSENLVM 1155 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~-di~~~pti~~LA~~l~~~~~ 1155 (2280)
.+++++.++++.++.|+++++.|.++.+|+ +||.|||.++.|+..+.+.||++++.. .-|...|+++++.++++...
T Consensus 12 ~~~I~~~V~~ilaE~lev~~e~Vtpda~l~dDLglDSLd~VeLVm~lE~~fGi~ipd~~e~~~~~TV~d~vdyI~~~~~ 90 (102)
T 2l9f_A 12 ATGALELVRHLVAERAELPVEVLRDDSRFLDDLHMSSITVGQLVNEAARAMGLSAVAMPTNFATATVREMAEALEARER 90 (102)
T ss_dssp SCCHHHHHHHHHHHHTTSCSSSCCTTCBTTTTSCCCHHHHHHHHHHHHHHHTCSTTSSCSCCTTCBHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHCCCHHHcCCCcchhhhcCCcHHHHHHHHHHHHHHhCCCCCccHHHHHHccHHHHHHHHHHhhc
Confidence 367889999999999999999999999998 999999999999999999999997643 33566999999999998664
No 290
>1pj5_A N,N-dimethylglycine oxidase; channelling, FAD binding, folate binding, amine oxidase, oxidoreductase; HET: FAD; 1.61A {Arthrobacter globiformis} SCOP: b.44.2.1 c.3.1.2 d.16.1.5 d.250.1.1 PDB: 1pj6_A* 1pj7_A* 3gsi_A*
Probab=98.01 E-value=1.8e-05 Score=110.65 Aligned_cols=39 Identities=31% Similarity=0.435 Sum_probs=33.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+++.||+|||||++|+++|++|+++|..+|+|+||++..
T Consensus 2 ~~~~dVvIIGgGi~Gls~A~~La~~G~~~V~vlE~~~~~ 40 (830)
T 1pj5_A 2 ASTPRIVIIGAGIVGTNLADELVTRGWNNITVLDQGPLN 40 (830)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHHTTCCCEEEECSSCTT
T ss_pred CCCCCEEEECcCHHHHHHHHHHHhCCCCcEEEEeCCCCC
Confidence 456899999999999999999999997249999998763
No 291
>4b2g_A GH3-1 auxin conjugating enzyme; signaling protein, ignaling protein, adenylate, amino acid conjugation, plant growth; HET: V1N; 2.40A {Vitis vinifera}
Probab=98.00 E-value=3.7e-05 Score=99.72 Aligned_cols=62 Identities=27% Similarity=0.427 Sum_probs=53.0
Q ss_pred CCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE---C--CeEEEEecCCCeEEECCeeec
Q 037878 850 GEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII---D--GKFFITGRIKDLIIVAGRNVY 924 (2280)
Q Consensus 850 ~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~---d--G~l~~~GR~dd~IKi~G~rI~ 924 (2280)
++.|+.+||+|... .|+|. ||+||++++. + ..+.|+||.|++++++|++|.
T Consensus 393 Ve~G~~YelViTt~---~GL~R---------------------Yr~GD~v~v~~f~~~~p~i~~~gR~~~~l~~~Geki~ 448 (609)
T 4b2g_A 393 VEVGKEYELVITTY---AGLYR---------------------YRVGDILRVTGFHNSAPQFHFVRRKNVLLSIDSDKTD 448 (609)
T ss_dssp CCTTCEEEEEEECT---TSCCS---------------------EEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBC
T ss_pred cCCCCeEEEehhhh---hhhhh---------------------eecCCEEEEeecCCCCcEEEEEEecCCeEEccccCCC
Confidence 36899999999754 35552 8999999995 3 579999999999999999999
Q ss_pred hHHHHHHHHhc
Q 037878 925 SADVEKTVESS 935 (2280)
Q Consensus 925 ~~EIE~~L~~~ 935 (2280)
..|||++|.+.
T Consensus 449 ~~~v~~av~~a 459 (609)
T 4b2g_A 449 EAELQKAVDNA 459 (609)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999854
No 292
>3atr_A Conserved archaeal protein; saturating double bonds, archaeal membrane precursor, like 2 geranylgeranylglyceryl phosphate; HET: FDA; 1.80A {Sulfolobus acidocaldarius} PDB: 3atq_A*
Probab=97.99 E-value=1.3e-05 Score=104.09 Aligned_cols=37 Identities=30% Similarity=0.497 Sum_probs=33.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
+++||+|||||++||+||+.|+++|+ +|+|+||++..
T Consensus 5 ~~~dVvIVGaG~aGl~aA~~La~~G~-~V~vlE~~~~~ 41 (453)
T 3atr_A 5 LKYDVLIIGGGFAGSSAAYQLSRRGL-KILLVDSKPWN 41 (453)
T ss_dssp EECSEEEECCSHHHHHHHHHHSSSSC-CEEEECSSCGG
T ss_pred CcCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCCCC
Confidence 35799999999999999999999999 69999998764
No 293
>2xve_A Flavin-containing monooxygenase; oxidoreductase; HET: FAD; 1.99A {Methylophaga aminisulfidivorans} PDB: 2xvf_A* 2xvh_A* 2xvi_A* 2xvj_A* 2xlt_A* 2vqb_A* 2vq7_A* 2xlu_A* 2xlp_A* 2xls_A* 2xlr_A*
Probab=97.99 E-value=1.1e-05 Score=104.72 Aligned_cols=39 Identities=38% Similarity=0.609 Sum_probs=36.8
Q ss_pred CeEEEECccHHHHHHHHHHHh---CCCCc---eEEEecCCCCCceE
Q 037878 22 TRIGIVGGGPSGLSTAYALAK---LGYRN---VTLLEKYHTVGGMC 61 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~---~G~~~---VtVlEk~~riGG~~ 61 (2280)
+||+|||||++||+||..|++ .|. + |+|||+++.+||.+
T Consensus 3 ~~V~IIGaG~aGl~aA~~L~~~~~~G~-~~~~V~v~E~~~~~GG~w 47 (464)
T 2xve_A 3 TRIAILGAGPSGMAQLRAFQSAQEKGA-EIPELVCFEKQADWGGQW 47 (464)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHHTTC-CCCEEEEECSSSSSCGGG
T ss_pred CcEEEECccHHHHHHHHHHHhhhhcCC-CCCcEEEEEcCCCCCCEe
Confidence 699999999999999999999 998 7 99999999999954
No 294
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=97.99 E-value=7.6e-06 Score=101.51 Aligned_cols=40 Identities=35% Similarity=0.517 Sum_probs=37.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++||+||+.|+++|+ +|+|+|+++.+||..
T Consensus 7 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~~~gG~~ 46 (332)
T 3lzw_A 7 VYDITIIGGGPVGLFTAFYGGMRQA-SVKIIESLPQLGGQL 46 (332)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSCHHH
T ss_pred cceEEEECCCHHHHHHHHHHHHCCC-CEEEEEcCCCCCcee
Confidence 4699999999999999999999998 699999999999844
No 295
>2r0c_A REBC; flavin adenine dinucleotide, monooxygenase, oxidoreductase; HET: FAD; 1.80A {Lechevalieria aerocolonigenes} PDB: 2r0g_A* 2r0p_A* 3ept_A*
Probab=97.99 E-value=6.9e-06 Score=109.08 Aligned_cols=38 Identities=29% Similarity=0.401 Sum_probs=34.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||++||++|+.|+++|+ +|+|+||++..+.
T Consensus 26 ~~dVlIVGaGpaGl~~A~~La~~G~-~V~vlEr~~~~~~ 63 (549)
T 2r0c_A 26 ETDVLILGGGPVGMALALDLAHRQV-GHLVVEQTDGTIT 63 (549)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCSCCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEeCCCCCCC
Confidence 4699999999999999999999999 6999999887654
No 296
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=97.98 E-value=5.3e-06 Score=108.23 Aligned_cols=38 Identities=29% Similarity=0.250 Sum_probs=35.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC-----CCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLG-----YRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G-----~~~VtVlEk~~riGG 59 (2280)
.+||+|||||++||+||..|++.| . +|+|||+++.+|.
T Consensus 30 ~~dVvIIGaG~aGl~aA~~L~~~g~~~~~~-~v~liE~~~~~g~ 72 (463)
T 3s5w_A 30 VHDLIGVGFGPSNIALAIALQERAQAQGAL-EVLFLDKQGDYRW 72 (463)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHHHHHCCC-CEEEEESCSSCCS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcccccCcc-cEEEEecCCCCCC
Confidence 359999999999999999999999 8 6999999998874
No 297
>2x3n_A Probable FAD-dependent monooxygenase; oxidoreductase; HET: FAD; 1.75A {Pseudomonas aeruginosa}
Probab=97.97 E-value=4.9e-06 Score=106.31 Aligned_cols=36 Identities=28% Similarity=0.374 Sum_probs=33.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
++||+|||||++||++|+.|+++|+ +|+|+||++..
T Consensus 6 ~~dVvIVGaG~aGl~~A~~L~~~G~-~V~viE~~~~~ 41 (399)
T 2x3n_A 6 HIDVLINGCGIGGAMLAYLLGRQGH-RVVVVEQARRE 41 (399)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCCC
T ss_pred cCCEEEECcCHHHHHHHHHHHhCCC-cEEEEeCCCCC
Confidence 4699999999999999999999999 69999998665
No 298
>2bry_A NEDD9 interacting protein with calponin homology and LIM domains; transport, coiled coil, cytoskeleton, FAD, flavoprotein, metal-binding, zinc; HET: FAD; 1.45A {Mus musculus} PDB: 2c4c_A* 2bra_A*
Probab=97.96 E-value=1.8e-05 Score=103.44 Aligned_cols=40 Identities=43% Similarity=0.544 Sum_probs=36.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
...+||+|||||++||++|..|++.|+ +|+|+|+++.+|+
T Consensus 90 ~~~~dVvIVGgG~aGl~aA~~La~~G~-~V~liEk~~~~g~ 129 (497)
T 2bry_A 90 CTNTKCLVVGAGPCGLRAAVELALLGA-RVVLVEKRIKFSR 129 (497)
T ss_dssp TTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCSSCCC
T ss_pred cCCCCEEEECccHHHHHHHHHHHHCCC-eEEEEEeccccCC
Confidence 456899999999999999999999998 6999999998875
No 299
>4eql_A 4-substituted benzoates-glutamate ligase GH3.12; firefly luciferase family, acyl adenylase, amino acid conjug ligase; HET: AMP SAL; 1.80A {Arabidopsis thaliana} PDB: 4epm_A* 4eq4_A* 4ewv_A*
Probab=97.93 E-value=9.8e-05 Score=95.75 Aligned_cols=62 Identities=18% Similarity=0.246 Sum_probs=52.1
Q ss_pred CCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEE-----CCeEEEEecCCCeEEECCeeech
Q 037878 851 EPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRII-----DGKFFITGRIKDLIIVAGRNVYS 925 (2280)
Q Consensus 851 p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~-----dG~l~~~GR~dd~IKi~G~rI~~ 925 (2280)
..|+.+||+|...+ |.|. ||+||++++. ...+.|+||.|+++++.|+++..
T Consensus 382 e~G~~YelViTt~~---GL~R---------------------Yr~GD~v~v~~f~~~~p~i~f~gR~~~~l~~~Gekl~~ 437 (581)
T 4eql_A 382 KLGCTYEPVVTNFA---GLYR---------------------MRVGDIVLVTGFYNNAPQFKFVRRENVVLSIDSDKTNE 437 (581)
T ss_dssp CTTCEEEEEEECSS---SCCS---------------------EECCEEEEEEEEETTEEEEEEEEETTEEECSSSCCEEH
T ss_pred CCCceEEEEEeecc---ceee---------------------EEcCCEEEEcccCCCCcEEEEEEecCCEEEeeeeECCH
Confidence 58999999998652 3331 7999999994 35799999999999999999999
Q ss_pred HHHHHHHHhcc
Q 037878 926 ADVEKTVESST 936 (2280)
Q Consensus 926 ~EIE~~L~~~p 936 (2280)
.|||++|.+..
T Consensus 438 ~~v~~al~~a~ 448 (581)
T 4eql_A 438 EDLFKAVSQAK 448 (581)
T ss_dssp HHHHHHHHHC-
T ss_pred HHHHHHHHHHH
Confidence 99999998653
No 300
>4epl_A Jasmonic acid-amido synthetase JAR1; ANL adenylating enzyme, acyl acid-amido synthetase, adenylat ligase; HET: JAI; 2.01A {Arabidopsis thaliana}
Probab=97.88 E-value=0.00047 Score=89.13 Aligned_cols=62 Identities=24% Similarity=0.290 Sum_probs=52.3
Q ss_pred CCCCCeeEEEEcCCCcccccCCCchhhHHHHhhhccCCCCCceeecCcEEEEEC-----CeEEEEecCCCeEEECCeeec
Q 037878 850 GEPGKEGEVWISSPSAGIGYWGREELSQITFRNELQNNRGRKYTRTGDLGRIID-----GKFFITGRIKDLIIVAGRNVY 924 (2280)
Q Consensus 850 ~p~G~~GEL~i~Gp~v~~GY~~~p~~t~~~f~~~~~~~~~~~~yrTGDlgr~~d-----G~l~~~GR~dd~IKi~G~rI~ 924 (2280)
++.|+.+||+|...+ |.| =||+||++++.+ ..+.|+||.|+++++.|+++.
T Consensus 388 ve~G~~YelviTt~~---GL~---------------------RYr~GD~v~v~g~~~~~p~~~~~gR~~~~l~~~Ge~~~ 443 (581)
T 4epl_A 388 VKIGEEYEVVITNYA---GLY---------------------RYRLGDVVKVIGFYNNTPQLKFICRRNLILSINIDKNT 443 (581)
T ss_dssp CCTTCEEEEEEESTT---SCS---------------------SEEEEEEEEEEEEETTEEEEEEEEETTCCBCSSSCCBC
T ss_pred cCCCCeEEEEEeecc---cee---------------------eEEcCCEEEEecccCCCcEEEEEeecCCeEEeeeeECC
Confidence 368999999998642 333 179999999952 479999999999999999999
Q ss_pred hHHHHHHHHhc
Q 037878 925 SADVEKTVESS 935 (2280)
Q Consensus 925 ~~EIE~~L~~~ 935 (2280)
..+||++|.+.
T Consensus 444 ~~~v~~al~~a 454 (581)
T 4epl_A 444 ERDLQLSVESA 454 (581)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 99999999863
No 301
>2qcu_A Aerobic glycerol-3-phosphate dehydrogenase; glycerol-3-phoshate dehydrogenase, oxidoreductase; HET: BOG FAD TAM; 1.75A {Escherichia coli} PDB: 2r45_A* 2r46_A* 2r4e_A* 2r4j_A*
Probab=97.88 E-value=7.5e-05 Score=98.05 Aligned_cols=39 Identities=26% Similarity=0.340 Sum_probs=34.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
++.||+|||||++|+++|+.|+++|. +|+|+||++..+|
T Consensus 2 ~~~DVvIIGgGi~G~~~A~~La~~G~-~V~llE~~~~~~g 40 (501)
T 2qcu_A 2 ETKDLIVIGGGINGAGIAADAAGRGL-SVLMLEAQDLACA 40 (501)
T ss_dssp -CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTTCS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC-CEEEEECCCCCCC
Confidence 45799999999999999999999999 6999999875444
No 302
>2fq1_A Isochorismatase; ENTB, NRPS, multi-domain, ACP, hydrolase; 2.30A {Escherichia coli}
Probab=97.87 E-value=7.8e-06 Score=98.51 Aligned_cols=67 Identities=15% Similarity=0.161 Sum_probs=63.5
Q ss_pred HHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHH
Q 037878 1083 VEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSE 1151 (2280)
Q Consensus 1083 e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~ 1151 (2280)
.+|+++.|+++| .+++.|+.+++|+++|+||+.+|+|+.++++. |+++++.++|++||++++++++.
T Consensus 217 ~dwlr~~va~~L-~~~~~i~~~~nL~~lGlDSi~~m~l~~~~~~~-g~~~~~~~l~~~ptl~~~~~~l~ 283 (287)
T 2fq1_A 217 KAALREVILPLL-DESDEPFDDDNLIDYGLDSVRMMALAARWRKV-HGDIDFVMLAKNPTIDAWWKLLS 283 (287)
T ss_dssp HHHHHHHHGGGC-CCSSCCCTTSCSGGGTCCTTHHHHHHHHHTTT-CTTCCHHHHHTSCSHHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCHhhcCCCCCHHHhCccHHHHHHHHHHHHHc-CCCCCHHHHHhCccHHHHHHHHH
Confidence 468999999999 88888999999999999999999999999998 99999999999999999999986
No 303
>3lad_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD; 2.20A {Azotobacter vinelandii} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1lpf_A*
Probab=97.86 E-value=1.6e-05 Score=103.94 Aligned_cols=40 Identities=33% Similarity=0.569 Sum_probs=35.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+++||+|||||++||+||++|+++|+ +|+|+||++..||+
T Consensus 2 ~~~DVvVIGgG~aGl~aA~~la~~G~-~V~liEk~~~~gG~ 41 (476)
T 3lad_A 2 QKFDVIVIGAGPGGYVAAIKSAQLGL-KTALIEKYKGKEGK 41 (476)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHHTC-CEEEEECCBCTTSS
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCC-EEEEEeCCCccCCC
Confidence 46899999999999999999999998 69999999754443
No 304
>1k0i_A P-hydroxybenzoate hydroxylase; PHBH, FAD, P-OHB, hydrolase; HET: FAD PHB; 1.80A {Pseudomonas aeruginosa} SCOP: c.3.1.2 d.16.1.2 PDB: 1k0j_A* 1k0l_A* 1doc_A* 1d7l_A* 1dod_A* 1doe_A* 1ius_A* 1iut_A* 1iuu_A* 1iuv_A* 1iuw_A* 1iux_A* 1pxb_A* 1pxc_A* 1dob_A* 1ykj_A* 1pxa_A* 1pbe_A* 1pdh_A* 1phh_A* ...
Probab=97.85 E-value=2.5e-05 Score=99.48 Aligned_cols=35 Identities=37% Similarity=0.630 Sum_probs=32.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
++||+|||||++||++|+.|+++|+ +|+|+||++.
T Consensus 2 ~~dV~IvGaG~aGl~~A~~L~~~G~-~v~v~E~~~~ 36 (394)
T 1k0i_A 2 KTQVAIIGAGPSGLLLGQLLHKAGI-DNVILERQTP 36 (394)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHTC-CEEEECSSCH
T ss_pred CccEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCCC
Confidence 4699999999999999999999999 6999999764
No 305
>3axb_A Putative oxidoreductase; dinucleotide-binding fold; HET: FAD; 1.92A {Aeropyrum pernix} PDB: 3vqr_A*
Probab=97.83 E-value=3.1e-05 Score=100.44 Aligned_cols=39 Identities=28% Similarity=0.353 Sum_probs=34.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCC-CCceEEEecCCCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLG-YRNVTLLEKYHTVG 58 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G-~~~VtVlEk~~riG 58 (2280)
|+++||+|||||++|+++|++|+++| . +|+|+||++.+|
T Consensus 21 m~~~dVvIIGgGiaGls~A~~La~~G~~-~V~vlE~~~~~~ 60 (448)
T 3axb_A 21 MPRFDYVVVGAGVVGLAAAYYLKVWSGG-SVLVVDAGHAPG 60 (448)
T ss_dssp CCEEEEEEECCSHHHHHHHHHHHHHHCS-CEEEEESSSSTT
T ss_pred CCcCCEEEECcCHHHHHHHHHHHhCCCC-cEEEEccCCCCC
Confidence 35679999999999999999999999 8 699999955554
No 306
>3fpz_A Thiazole biosynthetic enzyme; FAD, mitochondrion, N thiamine biosynthesis, transit peptide, biosynthetic protei; HET: AHZ; 1.82A {Saccharomyces cerevisiae}
Probab=97.80 E-value=6.8e-06 Score=101.69 Aligned_cols=41 Identities=39% Similarity=0.526 Sum_probs=36.7
Q ss_pred CCeEEEECccHHHHHHHHHHHh--CCCCceEEEecCCCCCceEE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAK--LGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~--~G~~~VtVlEk~~riGG~~~ 62 (2280)
.+||+|||||++||+||++|++ +|+ +|+||||++++||.+.
T Consensus 65 ~~DV~IIGaGPAGlsAA~~la~~r~G~-~V~viEk~~~~GG~~~ 107 (326)
T 3fpz_A 65 VSDVIIVGAGSSGLSAAYVIAKNRPDL-KVCIIESSVAPGGGSW 107 (326)
T ss_dssp EESEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSSSCCTTTT
T ss_pred CCCEEEECCCHHHHHHHHHHHHhCCCC-eEEEEECCCCCCceEE
Confidence 4799999999999999999975 598 6999999999999653
No 307
>3ce7_A Specific mitochodrial acyl carrier protein; malaria, mitochondrial, ACP, fatty acid biosynthesis, lipid synthesis, phosphopantetheine; 1.64A {Toxoplasma}
Probab=97.77 E-value=5.3e-05 Score=75.95 Aligned_cols=77 Identities=13% Similarity=0.146 Sum_probs=70.9
Q ss_pred ChhHHHHHHHHHHHHHhCCCCccccCCCChh------hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHH
Q 037878 1078 SNKDIVEFLKGLVSEQTGIPITKVSATDSLV------SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSE 1151 (2280)
Q Consensus 1078 ~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff------~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~ 1151 (2280)
...++.++|+++.++.++ +.+.|..+++|+ +||.|||.++.++..|.++||+.++..++....|+++|++++.
T Consensus 16 ~~~~i~~~i~~il~e~l~-~~~~i~~d~~l~~~~~~~dLglDSL~~veli~~lE~~fgi~i~~~~~~~~~Tv~~l~~~i~ 94 (107)
T 3ce7_A 16 DINAVTNYIVGMCQKFLQ-KGEKVTPSSKLEELRTREDRLWDCLDTVEFVLDVEEIFDVTVPDEVADNFQTLQEIADFVV 94 (107)
T ss_dssp CHHHHHHHHHHHHHTTBC-TTCCCCTTSCGGGSBBTTSSBCCHHHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHhC-CccccCCCCcccccCcccccCCCHHHHHHHHHHHHHHHCCCCCHHHHHhcCCHHHHHHHHH
Confidence 467889999999999999 888999999996 8899999999999999999999999999999999999999998
Q ss_pred hhhh
Q 037878 1152 NLVM 1155 (2280)
Q Consensus 1152 ~~~~ 1155 (2280)
+...
T Consensus 95 ~~~~ 98 (107)
T 3ce7_A 95 SERA 98 (107)
T ss_dssp HHHH
T ss_pred HHHH
Confidence 7654
No 308
>2gmh_A Electron transfer flavoprotein-ubiquinone oxidoreductase; HET: BHG FAD UQ5; 2.50A {Sus scrofa} SCOP: c.3.1.2 d.16.1.8 d.58.1.6 PDB: 2gmj_A*
Probab=97.75 E-value=6e-05 Score=100.48 Aligned_cols=39 Identities=41% Similarity=0.639 Sum_probs=36.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhC------CCCceEEEecCCCCCce
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL------GYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~------G~~~VtVlEk~~riGG~ 60 (2280)
+.||+|||||++||+||+.|+++ |+ +|+|+||.+.+|++
T Consensus 35 ~~DVvIVGaG~aGlaaA~~La~~~~~~~~G~-~V~vlEk~~~~g~~ 79 (584)
T 2gmh_A 35 EADVVIVGAGPAGLSAATRLKQLAAQHEKDL-RVCLVEKAAHIGAH 79 (584)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHTTCCC-CEEEECSSSSTTTT
T ss_pred CCCEEEECcCHHHHHHHHHHHhcccccCCCC-cEEEEeCCCCCCCc
Confidence 47999999999999999999999 98 69999999998875
No 309
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=97.73 E-value=2.6e-05 Score=95.71 Aligned_cols=37 Identities=38% Similarity=0.636 Sum_probs=33.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCC-CceEEEecCCCCCce
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGY-RNVTLLEKYHTVGGM 60 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~-~~VtVlEk~~riGG~ 60 (2280)
+||+|||||++||+||+.|+++|+ + |+|+|+ +.+||.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~~~-v~lie~-~~~gg~ 39 (311)
T 2q0l_A 2 IDCAIIGGGPAGLSAGLYATRGGVKN-AVLFEK-GMPGGQ 39 (311)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTCSS-EEEECS-SSTTCG
T ss_pred ceEEEECccHHHHHHHHHHHHCCCCc-EEEEcC-CCCCcc
Confidence 589999999999999999999997 6 999999 467773
No 310
>3lxd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; glutathione reductase (GR)-like ONFR; HET: FAD; 2.50A {Novosphingobium aromaticivorans}
Probab=97.71 E-value=3.3e-05 Score=98.97 Aligned_cols=51 Identities=20% Similarity=0.320 Sum_probs=40.0
Q ss_pred HHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcC
Q 037878 189 TSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISG 242 (2280)
Q Consensus 189 ~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~ 242 (2280)
...+.+..++.|++++++++|++|+.+++++ ..+++.+| +++.||.||+|+
T Consensus 197 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~~v~l~dG--~~i~aD~Vv~a~ 247 (415)
T 3lxd_A 197 SEFYQAEHRAHGVDLRTGAAMDCIEGDGTKV-TGVRMQDG--SVIPADIVIVGI 247 (415)
T ss_dssp HHHHHHHHHHTTCEEEETCCEEEEEESSSBE-EEEEESSS--CEEECSEEEECS
T ss_pred HHHHHHHHHhCCCEEEECCEEEEEEecCCcE-EEEEeCCC--CEEEcCEEEECC
Confidence 4445555567799999999999999876654 36777788 578999999984
No 311
>2dkh_A 3-hydroxybenzoate hydroxylase; flavoprotein, monooxygenase, complex, oxidoreductase; HET: FAD 3HB; 1.80A {Comamonas testosteroni} PDB: 2dki_A*
Probab=97.69 E-value=4.4e-05 Score=103.15 Aligned_cols=38 Identities=29% Similarity=0.358 Sum_probs=34.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-CCCCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAK-LGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~-~G~~~VtVlEk~~riG 58 (2280)
.+.||+|||||++||++|+.|++ .|+ +|+|+||++..+
T Consensus 31 ~~~dVlIVGaGpaGL~~A~~La~~~G~-~V~viEr~~~~~ 69 (639)
T 2dkh_A 31 SQVDVLIVGCGPAGLTLAAQLAAFPDI-RTCIVEQKEGPM 69 (639)
T ss_dssp SEEEEEEECCSHHHHHHHHHHTTCTTS-CEEEECSSSSCC
T ss_pred CCCcEEEECcCHHHHHHHHHHHHhCCC-CEEEEeCCCCCC
Confidence 35699999999999999999999 999 699999987653
No 312
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=97.69 E-value=3.2e-05 Score=94.93 Aligned_cols=36 Identities=33% Similarity=0.539 Sum_probs=32.5
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+||+|||||++||+||+.|+++|+ +|+|+|+ ++||.
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~-~v~li~~--~~gG~ 37 (310)
T 1fl2_A 2 YDVLIVGSGPAGAAAAIYSARKGI-RTGLMGE--RFGGQ 37 (310)
T ss_dssp EEEEEECCSHHHHHHHHHHHTTTC-CEEEECS--STTGG
T ss_pred CCEEEECcCHHHHHHHHHHHHCCC-cEEEEeC--CCCce
Confidence 699999999999999999999998 6999985 57774
No 313
>3fbs_A Oxidoreductase; structural genomics, PSI2, MCSG, protein STR initiative, midwest center for structural genomics; HET: FAD; 2.15A {Agrobacterium tumefaciens}
Probab=97.69 E-value=0.00015 Score=88.04 Aligned_cols=35 Identities=29% Similarity=0.420 Sum_probs=32.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
++||+|||||++||+||+.|+++|+ +|+|+|+++.
T Consensus 2 ~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~~~ 36 (297)
T 3fbs_A 2 KFDVIIIGGSYAGLSAALQLGRARK-NILLVDAGER 36 (297)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEEECCCC
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-CEEEEeCCCc
Confidence 3799999999999999999999998 6999999763
No 314
>2kci_A Putative acyl carrier protein; alpha, ACP, PCP, structural genomics, unknown function, PSI- 2, protein structure initiative; NMR {Geobacter metallireducens gs-15} PDB: 2kjs_A* 2lml_A* 2kwm_A*
Probab=97.67 E-value=4.8e-05 Score=72.71 Aligned_cols=73 Identities=11% Similarity=0.088 Sum_probs=67.9
Q ss_pred HHHHHHHHHHHhCCCCccccCCCChhh-cccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhhh
Q 037878 1083 VEFLKGLVSEQTGIPITKVSATDSLVS-YGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLVM 1155 (2280)
Q Consensus 1083 e~~l~~iw~~vLg~~~~~i~~~~~Ff~-lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~~ 1155 (2280)
.+.+.++++++|+++++.+.++.+|.+ +|-|||..+.++..+.+.||+.++..++-+-.|++++.+++.+...
T Consensus 4 ~ekv~~il~e~l~~d~~~i~~d~~l~~dlg~DSL~~veli~~lE~eF~I~i~~ed~~~~~Tv~dlv~~I~~~~~ 77 (87)
T 2kci_A 4 LDALTPIFRQVFDDDSIVLTRETSANDIDAWDSLSHMNLIVSLEVHYKIKFALGELQKLKNVGDLADLVDKKLA 77 (87)
T ss_dssp HHHHHHHHHHHTTCSCCCCCTTCCSTTCCCCCSTHHHHHHHHHHHHHTCCCCHHHHTTCCSHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCHHHCCCCCCcccccCCChHHHHHHHHHHHHHHCCccCHHHHHhCCCHHHHHHHHHHHHH
Confidence 567999999999999889999999997 9999999999999999999999999999999999999999987543
No 315
>2lki_A Putative uncharacterized protein; helical bundle, acyl carrier, phosphopantetheine, fatty acid biosynthesis, lipid synthesis, PSI-biology; HET: PNS; NMR {Nitrosomonas europaea}
Probab=97.67 E-value=7.4e-05 Score=74.51 Aligned_cols=73 Identities=21% Similarity=0.323 Sum_probs=66.0
Q ss_pred HHHHHHHHHHHHHhCCC--CccccCCCChh-hccc-chHHHHHHHHHHHHHhCCccCccccc--CcccHHHHHHHHHhh
Q 037878 1081 DIVEFLKGLVSEQTGIP--ITKVSATDSLV-SYGI-DSIGVVRAAQKLSDFLGVPVGAVDIF--TATCIADLASFSENL 1153 (2280)
Q Consensus 1081 ~~e~~l~~iw~~vLg~~--~~~i~~~~~Ff-~lGG-dSL~a~~l~~~l~~~~g~~l~~~di~--~~pti~~LA~~l~~~ 1153 (2280)
++.+.++++.++.++++ ++.|.++++|+ ++|. |||.+++++..|.+.||+.++..++. ...|+++|++++.+.
T Consensus 24 ~i~~~i~~il~e~l~~~~~~~~i~~d~~L~~dLGl~DSL~~veLi~~lE~~FgI~I~~eel~~~~~~Tv~~l~~~I~~~ 102 (105)
T 2lki_A 24 QHLEAVRNILGDVLNLGERKHTLTASSVLLGNIPELDSMAVVNVITALEEYFDFSVDDDEISAQTFETLGSLALFVEHK 102 (105)
T ss_dssp CTHHHHHHHHHHHTTCTTGGGTCCTTSBCBTTBTTCCHHHHHHHHHHHHHHHTSCCCGGGCCGGGGSBHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCCcccccCCCCCchhhhcCcccHHHHHHHHHHHHHHhCCCcCHHHhhHHhcCCHHHHHHHHHHH
Confidence 45678999999999998 67899999999 5999 99999999999999999999999964 689999999999864
No 316
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=97.66 E-value=6.4e-05 Score=98.06 Aligned_cols=37 Identities=16% Similarity=0.318 Sum_probs=30.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
++||+|||||++||+||+.|+++ |+ +|+|+|+++.++
T Consensus 3 ~~~VvIIGaG~aGl~aA~~L~~~~~g~-~Vtvie~~~~~~ 41 (472)
T 3iwa_A 3 LKHVVVIGAVALGPKAACRFKRLDPEA-HVTMIDQASRIS 41 (472)
T ss_dssp -CEEEEECCSSHHHHHHHHHHHHCTTS-EEEEECCC----
T ss_pred CCcEEEECCCHHHHHHHHHHHhhCcCC-CEEEEECCCccc
Confidence 57999999999999999999998 87 799999988764
No 317
>1chu_A Protein (L-aspartate oxidase); flavoenzyme, NAD biosynthesis, FAD, oxidoreductase; 2.20A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1knr_A* 1knp_A*
Probab=97.66 E-value=9.4e-05 Score=97.55 Aligned_cols=39 Identities=33% Similarity=0.423 Sum_probs=33.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.||+|||||++||+||+.|++ |. +|+|+||.+..||..
T Consensus 8 ~~DVvVVG~G~AGl~aAl~la~-G~-~V~vlEk~~~~~g~s 46 (540)
T 1chu_A 8 SCDVLIIGSGAAGLSLALRLAD-QH-QVIVLSKGPVTEGST 46 (540)
T ss_dssp ECSEEEECCSHHHHHHHHHHTT-TS-CEEEECSSCTTC---
T ss_pred CCCEEEECccHHHHHHHHHHhc-CC-cEEEEECCCCCCCCh
Confidence 5799999999999999999999 98 699999999887643
No 318
>2h88_A Succinate dehydrogenase flavoprotein subunit; complex II, membrane protein, heme protein, iron sulfur PROT cytochrome B, oxidoreductase; HET: FAD BHG HEM UNL; 1.74A {Gallus gallus} PDB: 1yq4_A* 1yq3_A* 2fbw_A* 2h89_A* 2wqy_A* 1zoy_A* 1zp0_A* 3abv_A* 3ae1_A* 3ae2_A* 3ae3_A* 3ae4_A* 3ae5_A* 3ae6_A* 3ae7_A* 3ae8_A* 3ae9_A* 3aea_A* 3aeb_A* 3aec_A* ...
Probab=97.65 E-value=9.9e-05 Score=98.33 Aligned_cols=40 Identities=25% Similarity=0.448 Sum_probs=35.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
.+.||+|||||++||+||+.|+++|. +|+|+||....||+
T Consensus 17 ~~~DVvVVG~G~AGl~AAl~aa~~G~-~V~vlEK~~~~~g~ 56 (621)
T 2h88_A 17 HEFDAVVVGAGGAGLRAAFGLSEAGF-NTACVTKLFPTRSH 56 (621)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCGGGSG
T ss_pred ccCCEEEECccHHHHHHHHHHHHCCC-cEEEEeccCCCCCC
Confidence 35799999999999999999999998 69999998876663
No 319
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=97.64 E-value=2.4e-05 Score=96.11 Aligned_cols=39 Identities=26% Similarity=0.567 Sum_probs=35.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++||+||++|+++|+ +|+|+|| +.+||.|
T Consensus 6 ~yDvvIIG~GpAGl~aA~~l~~~g~-~V~liE~-~~~gG~~ 44 (312)
T 4gcm_A 6 DFDIAIIGAGPAGMTAAVYASRANL-KTVMIER-GIPGGQM 44 (312)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTC-CEEEEES-SCTTGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-CEEEEec-CCCCCee
Confidence 6899999999999999999999998 6999998 5788854
No 320
>2ywl_A Thioredoxin reductase related protein; uncharacterized conserved protein, rossmann fold, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2cvj_A*
Probab=97.64 E-value=9.9e-05 Score=82.49 Aligned_cols=33 Identities=45% Similarity=0.665 Sum_probs=31.2
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
+||+|||||++|+.+|..|++.|. +|+|+|+++
T Consensus 2 ~~vvIIGgG~~Gl~~A~~l~~~g~-~v~lie~~~ 34 (180)
T 2ywl_A 2 WDVIVVGGGPSGLSAALFLARAGL-KVLVLDGGR 34 (180)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSC
T ss_pred CeEEEECCCHHHHHHHHHHHHCCC-cEEEEeCCC
Confidence 589999999999999999999998 699999976
No 321
>3fg2_P Putative rubredoxin reductase; ferredoxin reductase, RPA3782, F flavoprotein, oxidoreductase; HET: FAD; 2.20A {Rhodopseudomonas palustris}
Probab=97.63 E-value=0.00014 Score=92.90 Aligned_cols=51 Identities=16% Similarity=0.242 Sum_probs=39.5
Q ss_pred HHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcC
Q 037878 189 TSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISG 242 (2280)
Q Consensus 189 ~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~ 242 (2280)
...+.+..++.|++++++++|++|+.+++++ ..+++.+| +++.||.||+|+
T Consensus 187 ~~~l~~~l~~~GV~i~~~~~v~~i~~~~~~v-~~V~~~dG--~~i~aD~Vv~a~ 237 (404)
T 3fg2_P 187 SSYFHDRHSGAGIRMHYGVRATEIAAEGDRV-TGVVLSDG--NTLPCDLVVVGV 237 (404)
T ss_dssp HHHHHHHHHHTTCEEECSCCEEEEEEETTEE-EEEEETTS--CEEECSEEEECC
T ss_pred HHHHHHHHHhCCcEEEECCEEEEEEecCCcE-EEEEeCCC--CEEEcCEEEECc
Confidence 3344455566799999999999999876654 45777888 578999999984
No 322
>4fk1_A Putative thioredoxin reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: MSE FAD; 2.40A {Bacillus anthracis} PDB: 4fk1_C*
Probab=97.60 E-value=3e-05 Score=94.86 Aligned_cols=41 Identities=20% Similarity=0.383 Sum_probs=33.8
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.|+++||+|||||++||+||++|+++|+ +|+|+|++ ..||
T Consensus 2 n~M~~yDVvIIGaGpAGlsAA~~lar~g~-~v~lie~~-~~gg 42 (304)
T 4fk1_A 2 NAMKYIDCAVIGAGPAGLNASLVLGRARK-QIALFDNN-TNRN 42 (304)
T ss_dssp ----CEEEEEECCSHHHHHHHHHHHHTTC-CEEEEECS-CCGG
T ss_pred CCCCCcCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCC-CCCC
Confidence 35678999999999999999999999998 69999996 4555
No 323
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=97.59 E-value=2.7e-05 Score=102.14 Aligned_cols=45 Identities=33% Similarity=0.539 Sum_probs=37.0
Q ss_pred CCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 16 PCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 16 ~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.++|+++||+|||||++||+||++|+++|+ +|+|+||++.+||.|
T Consensus 20 ~~~m~~~dVvVIGgG~aGl~aA~~la~~G~-~V~liEk~~~~GG~~ 64 (491)
T 3urh_A 20 FQSMMAYDLIVIGSGPGGYVCAIKAAQLGM-KVAVVEKRSTYGGTC 64 (491)
T ss_dssp ------CCEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSHHH
T ss_pred hhhcccCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCcc
Confidence 344556899999999999999999999998 699999999999954
No 324
>2wdq_A Succinate dehydrogenase flavoprotein subunit; succinate dehydrogenase activity, cell inner membrane, trica acid cycle; HET: FAD HEM CBE; 2.40A {Escherichia coli} PDB: 1nen_A* 2acz_A* 1nek_A* 2wdr_A* 2wdv_A* 2wp9_A* 2ws3_A* 2wu2_A* 2wu5_A*
Probab=97.55 E-value=0.00021 Score=95.15 Aligned_cols=38 Identities=21% Similarity=0.393 Sum_probs=35.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||++||+||+.|+++|. +|+|+||....||
T Consensus 7 ~~DVvVVGaG~AGl~AA~~la~~G~-~V~vlEK~~~~~g 44 (588)
T 2wdq_A 7 EFDAVVIGAGGAGMRAALQISQSGQ-TCALLSKVFPTRS 44 (588)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCGGGS
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-cEEEEecCCCCCC
Confidence 4699999999999999999999998 6999999987765
No 325
>4a5l_A Thioredoxin reductase; oxidoreductase, redox metabolism, oxidative stress; HET: NDP FAD; 1.66A {Entamoeba histolytica} PDB: 4a65_A*
Probab=97.54 E-value=4.1e-05 Score=94.08 Aligned_cols=37 Identities=19% Similarity=0.367 Sum_probs=32.8
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
|.+.+||+|||||+|||+||++|+++|+ +|+|+|++.
T Consensus 1 M~~~yDvvIIG~GpAGl~AA~~la~~g~-~v~liE~~~ 37 (314)
T 4a5l_A 1 MSNIHDVVIIGSGPAAHTAAIYLGRSSL-KPVMYEGFM 37 (314)
T ss_dssp -CCCEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCSS
T ss_pred CCCCCcEEEECCCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 4455899999999999999999999999 699999964
No 326
>2aqj_A Tryptophan halogenase, pRNA; flavin-dependent halogenase, helical bundle, sandwiched sheets, structural genomics; HET: TRP FAD; 1.80A {Pseudomonas fluorescens} PDB: 2apg_A* 2ar8_A* 2ard_A* 2jkc_A*
Probab=97.53 E-value=0.00014 Score=96.33 Aligned_cols=36 Identities=36% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHh---CCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAK---LGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~---~G~~~VtVlEk~~r 56 (2280)
..+||+|||||++|+++|+.|++ .|+ +|+|+|+.+.
T Consensus 4 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~~ 42 (538)
T 2aqj_A 4 PIKNIVIVGGGTAGWMAASYLVRALQQQA-NITLIESAAI 42 (538)
T ss_dssp BCCEEEEECCSHHHHHHHHHHHHHCCSSC-EEEEEECSSS
T ss_pred CCCeEEEECCCHHHHHHHHHHHhhcCCCC-EEEEECCCCC
Confidence 35799999999999999999999 998 6999999653
No 327
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=97.52 E-value=0.00021 Score=95.83 Aligned_cols=39 Identities=26% Similarity=0.334 Sum_probs=34.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
++++||+|||||++||+||++|+++ |. +|+|+|+++.+|
T Consensus 34 ~~~~~VvIIGgG~AGl~aA~~L~~~~~g~-~V~vie~~~~~~ 74 (588)
T 3ics_A 34 WGSRKIVVVGGVAGGASVAARLRRLSEED-EIIMVERGEYIS 74 (588)
T ss_dssp CCCCEEEEECCSHHHHHHHHHHHHHCSSS-EEEEECSSSCSS
T ss_pred ccCCCEEEECCcHHHHHHHHHHHhhCcCC-CEEEEECCCCcc
Confidence 4467999999999999999999998 77 799999988764
No 328
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=97.48 E-value=0.00031 Score=88.56 Aligned_cols=42 Identities=26% Similarity=0.328 Sum_probs=33.9
Q ss_pred CCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 16 PCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 16 ~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
+...++.+|+|||||+||++||..|++.+. +|+|+|+++..+
T Consensus 4 ~~~~~~~~~vIvGgG~AGl~aA~~L~~~~~-~itlie~~~~~~ 45 (385)
T 3klj_A 4 HHHHKSTKILILGAGPAGFSAAKAALGKCD-DITMINSEKYLP 45 (385)
T ss_dssp ----CBCSEEEECCSHHHHHHHHHHTTTCS-CEEEECSSSSCC
T ss_pred ccccCCCCEEEEcCcHHHHHHHHHHhCCCC-EEEEEECCCCCC
Confidence 334456799999999999999999987787 699999987754
No 329
>1yp2_A Glucose-1-phosphate adenylyltransferase small subunit; ADP-glucose synthase, ADP-glucose pyrophosphorylase, agpase B; HET: PMB; 2.11A {Solanum tuberosum} SCOP: b.81.1.4 c.68.1.6 PDB: 1yp3_A* 1yp4_A*
Probab=97.48 E-value=0.00012 Score=94.72 Aligned_cols=86 Identities=15% Similarity=0.163 Sum_probs=59.4
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCC------------------------ceeecCEEECCCc
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNG------------------------VLSFQPIKIARKV 1372 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~------------------------~~~~~~i~Ig~~~ 1372 (2280)
++.||++|.|+...+ ..++||++|.||++|.|.+..+.++ ...++.++||++|
T Consensus 330 ~~~Ig~~~~I~~~~i---~~~~Ig~~~~Ig~~~~I~~~~~~~~~~~~~~~~~~~~~~~g~~~~~Ig~~~~i~~~~Ig~~~ 406 (451)
T 1yp2_A 330 DSVIGEGCVIKNCKI---HHSVVGLRSCISEGAIIEDSLLMGADYYETDADRKLLAAKGSVPIGIGKNCHIKRAIIDKNA 406 (451)
T ss_dssp EEEECTTCEEEEEEE---ESCEECTTCEECTTCEEESCEECCCSSCCCHHHHHHHHTTTCCCSEECTTCEEESEEECTTC
T ss_pred CeEECCCCEEcceEE---eccEECCCCEECCCCEEcCceEECCCCcccccccccccccCceeEEECCCCEEeccEeCCCc
Confidence 578888888875333 2688999999999999976654443 1234567888888
Q ss_pred EECCCCEECCCC------EECCCCEECcCC-ccCCCCccc
Q 037878 1373 SVGPYAVIQKGS------VIGEEAEVAPLQ-KSEGGKPIL 1405 (2280)
Q Consensus 1373 ~iG~~~~i~pg~------~ig~~a~ig~~s-~v~~~~~~~ 1405 (2280)
+||++++|.+++ +||+++.||+++ .|.+++.+.
T Consensus 407 ~IG~~~~i~~~~~~~~~~~ig~~~~ig~~~v~Ig~~a~i~ 446 (451)
T 1yp2_A 407 RIGDNVKIINKDNVQEAARETDGYFIKSGIVTVIKDALIP 446 (451)
T ss_dssp EECTTCEECCSSCCSCEEEGGGTEEEETTEEEECTTCEEC
T ss_pred EECCCCEEeCCcccccCceeCCCEEEcCCEEEECCCcEEC
Confidence 888888888763 556666666664 235555553
No 330
>4b63_A L-ornithine N5 monooxygenase; oxidoreductase, siderophore, flavin; HET: FAD NAP; 1.90A {Aspergillus fumigatus} PDB: 4b64_A* 4b65_A* 4b66_A* 4b67_A* 4b68_A* 4b69_A*
Probab=97.48 E-value=0.00014 Score=95.31 Aligned_cols=38 Identities=21% Similarity=0.050 Sum_probs=30.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
+||+|||+|++||++|..|+++|. +.+++|+.+..|+.
T Consensus 40 ~Dvi~IGaGp~gLa~A~~L~~~~~-~~~~~~~~~~~~~~ 77 (501)
T 4b63_A 40 HDLLCVGFGPASLAIAIALHDALD-PRLNKSASNIHAQP 77 (501)
T ss_dssp EEEEEECCSHHHHHHHHHHHHHHC-TTTCTTC----CCC
T ss_pred CcEEEEcccHHHHHHHHHHHhcCC-CceEEeccccCCCc
Confidence 699999999999999999999997 58888888887763
No 331
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=97.45 E-value=6e-05 Score=93.17 Aligned_cols=43 Identities=30% Similarity=0.459 Sum_probs=37.6
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+|+.++||+|||||++||+||+.|+++|+ +|+|+|++ .+||.+
T Consensus 4 ~~~~~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~~-~~gg~~ 46 (325)
T 2q7v_A 4 PTAHDYDVVIIGGGPAGLTAAIYTGRAQL-STLILEKG-MPGGQI 46 (325)
T ss_dssp CCCEEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-CTTGGG
T ss_pred CccccCCEEEECCCHHHHHHHHHHHHcCC-cEEEEeCC-CCCccc
Confidence 34456799999999999999999999998 69999998 788844
No 332
>1fh1_A NODF, nodulation protein F; ROOT nodulation factor, protein backbone fold, lipid binding protein; NMR {Rhizobium leguminosarum} SCOP: i.11.1.1
Probab=97.44 E-value=1.2e-05 Score=78.60 Aligned_cols=72 Identities=18% Similarity=0.283 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHhCCC--------CccccCCCChhhcccchHHHHHHHHHHHHHhCCccC---cccccCcccHHHHHHHH
Q 037878 1082 IVEFLKGLVSEQTGIP--------ITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVG---AVDIFTATCIADLASFS 1150 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~--------~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~---~~di~~~pti~~LA~~l 1150 (2280)
+.+.+.++++++++.+ ++.|+.+++|.++|.|||.++.++..|.+.||+.++ ..++...+|+++|++++
T Consensus 5 i~~~i~~ii~~~~~~~~~~~~~~~~~~i~~d~~l~dlg~DSl~~vel~~~lE~~fgi~i~~~~~~~~~~~~Tv~~l~~~i 84 (92)
T 1fh1_A 5 LTLEIISAINKLVKAENGERTSVALGEITTDTELTSLGIDSLGLADVLWDLEQLYGIKIEMNTADAWSNLNNIGDVVEAV 84 (92)
T ss_dssp CHHHHHHHHHHHC----------------------------CTTTTHHHHHHHC-----------------CTTTSTHHH
T ss_pred HHHHHHHHHHHHHHhccccccCCCHhhCCCCCCHhhcCCChHHHHHHHHHHHHHhCCccCCccHhHHhhcCCHHHHHHHH
Confidence 4567888999998854 347899999999999999999999999999999998 77899999999999999
Q ss_pred Hhh
Q 037878 1151 ENL 1153 (2280)
Q Consensus 1151 ~~~ 1153 (2280)
.+.
T Consensus 85 ~~~ 87 (92)
T 1fh1_A 85 RGL 87 (92)
T ss_dssp HC-
T ss_pred HHH
Confidence 764
No 333
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=97.42 E-value=4.7e-05 Score=99.07 Aligned_cols=41 Identities=32% Similarity=0.628 Sum_probs=38.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+++||+|||||++||+||+.|++.|+ +|+|+||++.+||.|
T Consensus 3 ~~~DVvVIGgG~aGl~aA~~l~~~G~-~V~liEk~~~~GG~~ 43 (466)
T 3l8k_A 3 LKYDVVVIGAGGAGYHGAFRLAKAKY-NVLMADPKGELGGNC 43 (466)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECTTSSSSHHH
T ss_pred ccceEEEECCCHHHHHHHHHHHhCCC-eEEEEECCCCCCCcc
Confidence 45799999999999999999999998 699999999999955
No 334
>2weu_A Tryptophan 5-halogenase; regioselectivity, antifungal protei; HET: TRP; 1.70A {Streptomyces rugosporus} PDB: 2wet_A* 2wes_A*
Probab=97.42 E-value=0.00038 Score=91.82 Aligned_cols=51 Identities=8% Similarity=-0.027 Sum_probs=37.7
Q ss_pred HHHHHHHHHhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 188 YTSLWQKLSKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 188 ~~~l~~~la~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
+.....+.+++.|++++.+ +|++|+.++++..+.+++.+| +++++|.||.|
T Consensus 175 l~~~L~~~a~~~gv~~~~~-~v~~i~~~~~~~~~~v~~~~g--~~~~ad~vV~A 225 (511)
T 2weu_A 175 VARYLSEYAIARGVRHVVD-DVQHVGQDERGWISGVHTKQH--GEISGDLFVDC 225 (511)
T ss_dssp HHHHHHHHHHHTTCEEEEC-CEEEEEECTTSCEEEEEESSS--CEEECSEEEEC
T ss_pred HHHHHHHHHHHCCCEEEEC-eEeEEEEcCCCCEEEEEECCC--CEEEcCEEEEC
Confidence 3333333444578999999 999999866654456777788 47999999998
No 335
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=97.41 E-value=7e-05 Score=92.27 Aligned_cols=44 Identities=32% Similarity=0.533 Sum_probs=36.4
Q ss_pred CCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 16 PCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 16 ~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
..|+.++||+|||||++|++||+.|+++|+ +|+|+|+ +.+||.+
T Consensus 11 ~~m~~~~dvvIIG~G~aGl~aA~~l~~~g~-~v~lie~-~~~gg~~ 54 (319)
T 3cty_A 11 EEKERDFDVVIVGAGAAGFSAAVYAARSGF-SVAILDK-AVAGGLT 54 (319)
T ss_dssp ---CCEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEES-SSTTGGG
T ss_pred ccccCCCcEEEECcCHHHHHHHHHHHhCCC-cEEEEeC-CCCCccc
Confidence 344556899999999999999999999998 6999999 5788843
No 336
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=97.40 E-value=8.6e-05 Score=97.97 Aligned_cols=47 Identities=21% Similarity=0.421 Sum_probs=41.2
Q ss_pred cCCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 14 LHPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 14 ~~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.+.++.++||+|||||++|++||++|++.|+ +|+|+|+++.+||.|
T Consensus 36 ~~~~~~~~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~GG~~ 82 (523)
T 1mo9_A 36 VDENDPREYDAIFIGGGAAGRFGSAYLRAMGG-RQLIVDRWPFLGGSC 82 (523)
T ss_dssp CCTTCCSCBSEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSCHH
T ss_pred cCCCCCCcCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCCCCCCcc
Confidence 34455667899999999999999999999998 699999999899854
No 337
>1hyu_A AHPF, alkyl hydroperoxide reductase subunit F; thiol-thiolate hydrogen bond, nucleotide binding fold, thior reductase, thioredoxin; HET: FAD; 2.00A {Salmonella typhimurium} SCOP: c.3.1.5 c.3.1.5 c.47.1.2 c.47.1.2 PDB: 1zyn_A 1zyp_A
Probab=97.39 E-value=0.00023 Score=93.63 Aligned_cols=38 Identities=32% Similarity=0.479 Sum_probs=34.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
.++||+|||||++|++||++|+++|+ +|+|+|+ +.||.
T Consensus 211 ~~~dVvIIGgG~AGl~aA~~la~~G~-~v~lie~--~~GG~ 248 (521)
T 1hyu_A 211 DAYDVLIVGSGPAGAAAAVYSARKGI-RTGLMGE--RFGGQ 248 (521)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEECS--STTGG
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCC-eEEEEEC--CCCCc
Confidence 46799999999999999999999998 6999986 57874
No 338
>1pn0_A Phenol 2-monooxygenase; two dimers, TLS refinement, oxidoreductase; HET: FAD; 1.70A {Trichosporon cutaneum} SCOP: c.3.1.2 c.47.1.10 d.16.1.2 PDB: 1foh_A*
Probab=97.38 E-value=0.00019 Score=97.08 Aligned_cols=36 Identities=33% Similarity=0.512 Sum_probs=32.7
Q ss_pred CCeEEEECccHHHHHHHHHHHh-----CCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAK-----LGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~-----~G~~~VtVlEk~~ri 57 (2280)
+.||+|||||++||++|..|++ .|+ +|+||||++..
T Consensus 8 ~~dVlIVGaGpaGL~lA~~La~~~~~~~Gi-~v~viE~~~~~ 48 (665)
T 1pn0_A 8 YCDVLIVGAGPAGLMAARVLSEYVRQKPDL-KVRIIDKRSTK 48 (665)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHHHHSTTC-CEEEECSSSSC
T ss_pred CCcEEEECcCHHHHHHHHHHhccccccCCC-CEEEEeCCCCC
Confidence 4699999999999999999999 999 69999997643
No 339
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=97.38 E-value=6.8e-05 Score=98.08 Aligned_cols=39 Identities=28% Similarity=0.590 Sum_probs=36.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++||+||++|+++|+ +|+|+|| +.+||.|
T Consensus 26 ~~DVvVIGgG~aGl~aA~~la~~G~-~V~liEk-~~~GG~~ 64 (484)
T 3o0h_A 26 DFDLFVIGSGSGGVRAARLAGALGK-RVAIAEE-YRIGGTC 64 (484)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHTTC-CEEEEES-SCTTHHH
T ss_pred CCCEEEECcCHHHHHHHHHHHhCcC-EEEEEeC-CCCCCce
Confidence 5799999999999999999999998 6999999 7899955
No 340
>1c0p_A D-amino acid oxidase; alpha-beta-alpha motif, flavin containing protein, oxidoreductase; HET: FAD; 1.20A {Rhodosporidium toruloides} SCOP: c.4.1.2 d.16.1.3 PDB: 1c0i_A* 1c0l_A* 1c0k_A*
Probab=97.38 E-value=0.00012 Score=92.07 Aligned_cols=39 Identities=33% Similarity=0.535 Sum_probs=34.5
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.+++||+|||||++|+++|++|+++|. +|+|+||+...+
T Consensus 4 ~~~~dVvVIG~Gi~Gls~A~~La~~G~-~V~vle~~~~~~ 42 (363)
T 1c0p_A 4 HSQKRVVVLGSGVIGLSSALILARKGY-SVHILARDLPED 42 (363)
T ss_dssp CCSCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSCTTC
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC-EEEEEeccCCCC
Confidence 356899999999999999999999998 699999987443
No 341
>2xdo_A TETX2 protein; tetracycline degradation, tigecycline, flavin, bacteroides F oxidoreductase; HET: FAD; 2.09A {Bacteroides thetaiotaomicron} PDB: 2y6q_A* 2xyo_A* 2y6r_A* 3p9u_A*
Probab=97.38 E-value=0.00011 Score=93.52 Aligned_cols=41 Identities=32% Similarity=0.574 Sum_probs=36.5
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+++++||+|||||++||++|+.|+++|+ +|+||||++.++.
T Consensus 23 ~~~~~dV~IVGaG~aGl~~A~~L~~~G~-~v~v~E~~~~~~~ 63 (398)
T 2xdo_A 23 LLSDKNVAIIGGGPVGLTMAKLLQQNGI-DVSVYERDNDREA 63 (398)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHTTTC-EEEEEECSSSTTC
T ss_pred ccCCCCEEEECCCHHHHHHHHHHHHCCC-CEEEEeCCCCccc
Confidence 3456899999999999999999999999 6999999887654
No 342
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=97.35 E-value=0.00012 Score=94.39 Aligned_cols=41 Identities=34% Similarity=0.826 Sum_probs=38.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
..+||+|||||++||+||++|+++|+ +|+|||+++++||..
T Consensus 121 ~~~~V~IIGgGpAGl~aA~~L~~~G~-~V~v~e~~~~~GG~l 161 (456)
T 2vdc_G 121 LGLSVGVIGAGPAGLAAAEELRAKGY-EVHVYDRYDRMGGLL 161 (456)
T ss_dssp CCCCEEEECCSHHHHHHHHHHHHHTC-CEEEECSSSSCSTHH
T ss_pred CCCEEEEECCCHHHHHHHHHHHHCCC-eEEEEeccCCCCCee
Confidence 46799999999999999999999999 699999999999964
No 343
>1jnr_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 1.60A {Archaeoglobus fulgidus dsm 4304} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1jnz_A* 2fjb_A* 2fja_A* 2fjd_A* 2fje_A*
Probab=97.33 E-value=0.0014 Score=88.21 Aligned_cols=36 Identities=50% Similarity=0.605 Sum_probs=32.5
Q ss_pred CCeEEEECccHHHHHHHHHHH---h-CCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALA---K-LGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La---~-~G~~~VtVlEk~~ri 57 (2280)
+.||+|||||++||+||+.|+ + +|. +|+|+||....
T Consensus 22 ~~DVvVIG~G~AGl~AAl~aa~~~~~~G~-~V~vlEK~~~~ 61 (643)
T 1jnr_A 22 ETDILIIGGGFSGCGAAYEAAYWAKLGGL-KVTLVEKAAVE 61 (643)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHTTTTC-CEEEECSSCTT
T ss_pred cCCEEEECcCHHHHHHHHHHhhhhhhCCC-eEEEEeCcCCC
Confidence 479999999999999999999 6 898 69999998753
No 344
>2cgq_A Acyl carrier protein ACPA; RV0033, protein transport, phosphopant; 1.83A {Mycobacterium tuberculosis}
Probab=97.32 E-value=0.00019 Score=72.26 Aligned_cols=71 Identities=17% Similarity=0.300 Sum_probs=64.4
Q ss_pred hhHHHHHHHHHHHHHhCCCCccccCCCChh-hcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhhh
Q 037878 1079 NKDIVEFLKGLVSEQTGIPITKVSATDSLV-SYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENLV 1154 (2280)
Q Consensus 1079 ~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff-~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~~ 1154 (2280)
.+++.++|++++++.++ |..+++|+ ++|.|||..+.++..|.++||++++..++....|+++|++++.+..
T Consensus 28 ~~ei~~~v~~il~e~l~-----I~~d~~l~~dLGlDSLd~veLi~~LEe~FgI~I~~e~l~~~~TV~dlv~~I~~~l 99 (113)
T 2cgq_A 28 EEAINATIQRILRTDRG-----ITANQVLVDDLGFDSLKLFQLITELEDEFDIAISFRDAQNIKTVGDVYTSVAVWF 99 (113)
T ss_dssp HHHHHHHHHHHHTCCSC-----CCTTCBTTTTTCCCHHHHHHHHHHHHHHHTCCCCHHHHHHCCBHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHhC-----CCCCCchhhhcCCCHHHHHHHHHHHHHHhCCCcCHHHHHhCCCHHHHHHHHHHHH
Confidence 45678889999999988 67889995 9999999999999999999999999999999999999999998754
No 345
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=97.27 E-value=0.00011 Score=95.54 Aligned_cols=39 Identities=31% Similarity=0.640 Sum_probs=36.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++||+||++|+++|+ +|+|+|| +.+||.|
T Consensus 5 ~~DVvVIGaG~aGl~aA~~la~~G~-~V~liEk-~~~GG~~ 43 (463)
T 4dna_A 5 DYDLFVIGGGSGGVRSGRLAAALGK-KVAIAEE-FRYGGTC 43 (463)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC-CEEEEES-SCTTHHH
T ss_pred CCcEEEECcCHHHHHHHHHHHhCCC-EEEEEeC-CCCCCcc
Confidence 5799999999999999999999998 6999999 8899954
No 346
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=97.26 E-value=0.00092 Score=87.15 Aligned_cols=37 Identities=30% Similarity=0.408 Sum_probs=32.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
++||+|||||++|++||.+|++. |. +|+|+|+++..|
T Consensus 36 ~~dvvIIG~G~aGl~aA~~l~~~~~g~-~V~lie~~~~~~ 74 (480)
T 3cgb_A 36 SMNYVIIGGDAAGMSAAMQIVRNDENA-NVVTLEKGEIYS 74 (480)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHHCTTC-EEEEECSSSCCS
T ss_pred cceEEEECCCHHHHHHHHHHHhhCcCC-cEEEEECCCCCC
Confidence 46999999999999999999996 87 699999987664
No 347
>1rp0_A ARA6, thiazole biosynthetic enzyme; protein ligand complex, biosynthetic protein; HET: AHZ HTO; 1.60A {Arabidopsis thaliana} SCOP: c.3.1.6
Probab=97.24 E-value=0.00015 Score=87.43 Aligned_cols=40 Identities=35% Similarity=0.605 Sum_probs=36.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~riGG~ 60 (2280)
.++||+|||||++||+||+.|+++ |. +|+|+||++.+||.
T Consensus 38 ~~~dVvIIGgG~aGl~aA~~la~~~G~-~V~viEk~~~~gg~ 78 (284)
T 1rp0_A 38 AETDVVVVGAGSAGLSAAYEISKNPNV-QVAIIEQSVSPGGG 78 (284)
T ss_dssp TEEEEEEECCSHHHHHHHHHHHTSTTS-CEEEEESSSSCCTT
T ss_pred cccCEEEECccHHHHHHHHHHHHcCCC-eEEEEECCCCCCCc
Confidence 357999999999999999999997 98 69999999999873
No 348
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=97.23 E-value=0.00099 Score=89.01 Aligned_cols=36 Identities=28% Similarity=0.393 Sum_probs=32.5
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
+||+|||||++||+||++|+++ |+ +|+|+|+++..|
T Consensus 2 ~~VvIIGgG~AGl~aA~~L~~~~~~~-~V~lie~~~~~~ 39 (565)
T 3ntd_A 2 KKILIIGGVAGGASAAARARRLSETA-EIIMFERGEYVS 39 (565)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCSSS-EEEEECSSSCSS
T ss_pred CcEEEECCCHHHHHHHHHHHhhCcCC-CEEEEECCCCcc
Confidence 5899999999999999999998 67 799999987654
No 349
>3vrd_B FCCB subunit, flavocytochrome C flavin subunit; sulfide oxidation, heme C binding, FAD binding, electron TRA oxidoreductase complex; HET: HEC FAD; 1.50A {Thermochromatium tepidum} PDB: 1fcd_A*
Probab=97.23 E-value=0.001 Score=84.73 Aligned_cols=36 Identities=31% Similarity=0.456 Sum_probs=31.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~r 56 (2280)
.|+|+|||||++|++||.+|++.|.+ +|+|+|+++.
T Consensus 2 GKkVvIIG~G~AG~~aA~~L~~~~~~~~Vtlie~~~~ 38 (401)
T 3vrd_B 2 GRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNET 38 (401)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCSS
T ss_pred cCEEEEECCcHHHHHHHHHHHhcCcCCeEEEEeCCCC
Confidence 36899999999999999999988742 6999999886
No 350
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=97.22 E-value=0.00011 Score=95.96 Aligned_cols=43 Identities=40% Similarity=0.844 Sum_probs=38.8
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
|+.++||+|||||++|++||++|++.|+ +|+|+|+++.+||.|
T Consensus 3 m~~~~dVvIIGaG~aGl~aA~~l~~~G~-~V~liE~~~~~GG~~ 45 (482)
T 1ojt_A 3 ADAEYDVVVLGGGPGGYSAAFAAADEGL-KVAIVERYKTLGGVC 45 (482)
T ss_dssp SEEEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSCSSHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCCCCce
Confidence 4446899999999999999999999998 699999999999854
No 351
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=97.21 E-value=0.00033 Score=89.66 Aligned_cols=71 Identities=17% Similarity=0.237 Sum_probs=60.2
Q ss_pred CCeeCCCceeccCCcccCCcceEECCCcEeCCCcEEeecccCCCceEeeCeEECCCcEEccCCeeCCCcEeCCCcEEccC
Q 037878 1573 GAKIGRYCSIRAINPVSCPQQVTLGAGVHLGDFSRIIPGFYSSIGFIFGKVEVQDNSVIGSQSLVLPNSVVSRDVILGAL 1652 (2280)
Q Consensus 1573 G~~IG~~~~i~~~~~~~~~~~~~iG~~~~i~~~~~i~~~~~~~~~~~~~~~~IG~~~~iG~~~~v~~g~~ig~~~~vg~~ 1652 (2280)
++.||++|.| ..+.+. .+.||++|+|+++|.| +.++||++|+||.++.|.. +.||+++.||++
T Consensus 324 ~~~ig~~~~I-~~~~i~---~~~ig~~~~I~~~~~i------------~~~~i~~~~~i~~~~~i~~-~~ig~~~~i~~~ 386 (420)
T 3brk_X 324 SSVVSGDCII-SGAALN---RSLLFTGVRANSYSRL------------ENAVVLPSVKIGRHAQLSN-VVIDHGVVIPEG 386 (420)
T ss_dssp SCEECSSCEE-ESCEEE---SCEECTTCEECTTCEE------------EEEEECTTCEECTTCEEEE-EEECTTCEECTT
T ss_pred CCEECCCCEE-cCCEEe---CcEEcCCCEECCCCEE------------cceEEcCCCEECCCCEEec-eEECCCCEECCC
Confidence 5889999999 554442 4899999999999988 4679999999999999985 999999999999
Q ss_pred ccccCCCc
Q 037878 1653 SVAPMHSV 1660 (2280)
Q Consensus 1653 s~v~~~~~ 1660 (2280)
++|.++..
T Consensus 387 ~~i~~~~~ 394 (420)
T 3brk_X 387 LIVGEDPE 394 (420)
T ss_dssp CEESSCHH
T ss_pred CEEeCCCC
Confidence 99987743
No 352
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=97.20 E-value=0.00015 Score=94.36 Aligned_cols=40 Identities=33% Similarity=0.682 Sum_probs=37.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++|++||++|++.|+ +|+|+|+++.+||.|
T Consensus 2 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~ 41 (468)
T 2qae_A 2 PYDVVVIGGGPGGYVASIKAAQLGM-KTACVEKRGALGGTC 41 (468)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCcCCcC
Confidence 4799999999999999999999998 699999999999954
No 353
>3jsk_A Cypbp37 protein; octameric thiazole synthase, biosynthetic protein; HET: AHZ; 2.70A {Neurospora crassa}
Probab=97.19 E-value=0.00019 Score=87.34 Aligned_cols=38 Identities=45% Similarity=0.685 Sum_probs=35.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG 59 (2280)
++||+|||||++||+||+.|+++ |. +|+|+|+++.+||
T Consensus 79 ~~DVvIVGgG~AGL~aA~~La~~~~G~-~V~LiEk~~~~GG 118 (344)
T 3jsk_A 79 ETDIVIVGAGSCGLSAAYVLSTLRPDL-RITIVEAGVAPGG 118 (344)
T ss_dssp BCSEEEECCSHHHHHHHHHHHHHCTTS-CEEEEESSSSCCT
T ss_pred cCCEEEECccHHHHHHHHHHHhcCCCC-EEEEEeCCCccCC
Confidence 57999999999999999999997 98 6999999999887
No 354
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=97.19 E-value=0.00018 Score=93.65 Aligned_cols=42 Identities=29% Similarity=0.630 Sum_probs=37.6
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
|+.++||+|||||++|++||++|++.|+ +|+|+|++ .+||.|
T Consensus 1 M~~~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~-~~GG~~ 42 (467)
T 1zk7_A 1 MEPPVQVAVIGSGGAAMAAALKAVEQGA-QVTLIERG-TIGGTC 42 (467)
T ss_dssp CCCCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS-STTHHH
T ss_pred CCCcCCEEEECCCHHHHHHHHHHHHCCC-EEEEEeCC-CCCccc
Confidence 3456899999999999999999999998 69999998 789854
No 355
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=97.19 E-value=0.00016 Score=88.70 Aligned_cols=40 Identities=33% Similarity=0.567 Sum_probs=36.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEE-EecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTL-LEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtV-lEk~~riGG~~ 61 (2280)
.++||+|||||++||+||+.|+++|+ +|+| +|| +.+||.+
T Consensus 3 ~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~li~e~-~~~gG~~ 43 (315)
T 3r9u_A 3 AMLDVAIIGGGPAGLSAGLYATRGGL-KNVVMFEK-GMPGGQI 43 (315)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHHTC-SCEEEECS-SSTTGGG
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC-CeEEEEeC-CCCCcee
Confidence 35799999999999999999999998 6999 999 7889864
No 356
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=97.17 E-value=0.00017 Score=93.59 Aligned_cols=41 Identities=34% Similarity=0.618 Sum_probs=36.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.++||+|||||++|++||.+|++.|+ +|+|+|++ .+||.|
T Consensus 2 ~~~~dVvIIGgG~aGl~aA~~l~~~g~-~V~liE~~-~~GG~~ 42 (463)
T 2r9z_A 2 TQHFDLIAIGGGSGGLAVAEKAAAFGK-RVALIESK-ALGGTC 42 (463)
T ss_dssp CCCEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-CTTHHH
T ss_pred CccCcEEEECCCHHHHHHHHHHHhCCC-cEEEEcCC-CCCCcC
Confidence 346899999999999999999999998 69999997 789854
No 357
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=97.17 E-value=0.00019 Score=93.55 Aligned_cols=42 Identities=38% Similarity=0.745 Sum_probs=38.3
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.++||+|||||++|++||.+|++.|+ +|+|+|+++.+||.+
T Consensus 4 ~~~~dvvIIGaG~aGl~aA~~l~~~g~-~V~liE~~~~~GG~~ 45 (470)
T 1dxl_A 4 SDENDVVIIGGGPGGYVAAIKAAQLGF-KTTCIEKRGALGGTC 45 (470)
T ss_dssp CCCCCEEEECCSHHHHHHHHHHHHHTC-CEEEEECSSSSCCSH
T ss_pred CccCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCccccc
Confidence 346899999999999999999999998 699999999999954
No 358
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=97.16 E-value=0.00023 Score=97.17 Aligned_cols=45 Identities=40% Similarity=0.620 Sum_probs=40.3
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
...++||+|||||++||+||+.|+++|+ +|+|+|+++++||.+..
T Consensus 388 ~~~~~~VvIIGgG~AGl~aA~~La~~G~-~V~liE~~~~~GG~~~~ 432 (690)
T 3k30_A 388 KESDARVLVVGAGPSGLEAARALGVRGY-DVVLAEAGRDLGGRVTQ 432 (690)
T ss_dssp CSSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSSSCTHHHH
T ss_pred ccccceEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCCCCEeee
Confidence 3456899999999999999999999998 69999999999997643
No 359
>2cul_A Glucose-inhibited division protein A-related PROT probable oxidoreductase; rossmann fold, protein-FAD complex; HET: FAD; 1.65A {Thermus thermophilus} SCOP: c.3.1.7
Probab=97.16 E-value=0.00025 Score=82.86 Aligned_cols=35 Identities=40% Similarity=0.469 Sum_probs=32.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
+++||+|||||++|++||+.|++.|. +|+|+|++.
T Consensus 2 ~~~dVvVVGgG~aGl~aA~~la~~g~-~v~lie~~~ 36 (232)
T 2cul_A 2 AAYQVLIVGAGFSGAETAFWLAQKGV-RVGLLTQSL 36 (232)
T ss_dssp CCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEecCC
Confidence 45899999999999999999999998 699999983
No 360
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=97.16 E-value=0.00021 Score=94.10 Aligned_cols=42 Identities=33% Similarity=0.614 Sum_probs=36.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC--------CCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH--------TVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~--------riGG~~ 61 (2280)
+.++||+|||||++|++||.+|++.|. +|+|+||++ .+||.|
T Consensus 30 ~~~~DVvVIGgGpaGl~aA~~la~~G~-~V~liEk~~~~~~~~~~~~GGtc 79 (519)
T 3qfa_A 30 SYDYDLIIIGGGSGGLAAAKEAAQYGK-KVMVLDFVTPTPLGTRWGLGGTC 79 (519)
T ss_dssp SCSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECCCCCCTTCCCCCTTCHH
T ss_pred CCCCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeccCccccccCCCccccc
Confidence 346799999999999999999999998 699999965 788844
No 361
>2a87_A TRXR, TR, thioredoxin reductase; FAD, NAP, NMA, TLS, oxidoreduct structural genomics, PSI, protein structure initiative; HET: FAD NAP; 3.00A {Mycobacterium tuberculosis}
Probab=97.16 E-value=0.00021 Score=88.74 Aligned_cols=43 Identities=21% Similarity=0.349 Sum_probs=36.5
Q ss_pred CCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 16 PCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 16 ~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
..+++++||+|||||++||+||+.|+++|+ +|+|+|++ .+||.
T Consensus 9 ~~~~~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~~-~~gg~ 51 (335)
T 2a87_A 9 RAHHPVRDVIVIGSGPAGYTAALYAARAQL-APLVFEGT-SFGGA 51 (335)
T ss_dssp -CCCCCEEEEEECCHHHHHHHHHHHHHTTC-CCEEECCS-SCSCG
T ss_pred cccCCcCCEEEECCCHHHHHHHHHHHhCCC-eEEEEecC-CCCCc
Confidence 344556899999999999999999999998 69999975 67774
No 362
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=97.16 E-value=0.00012 Score=95.85 Aligned_cols=42 Identities=38% Similarity=0.740 Sum_probs=38.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.++||+|||||++|++||+.|++.|+ +|+|+|+++.+||.|
T Consensus 3 ~~~~dVvIIGgG~aGl~aA~~l~~~G~-~V~liE~~~~~GG~~ 44 (478)
T 1v59_A 3 NKSHDVVIIGGGPAGYVAAIKAAQLGF-NTACVEKRGKLGGTC 44 (478)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSHHH
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCC-eEEEEecCCCcCCcc
Confidence 345799999999999999999999998 699999999999854
No 363
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=97.15 E-value=0.00016 Score=93.60 Aligned_cols=41 Identities=27% Similarity=0.522 Sum_probs=36.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.++||+|||||++|++||++|++.|+ +|+|+|++ .+||.|
T Consensus 2 ~~~~dvvIIGgG~aGl~aA~~l~~~g~-~V~liE~~-~~GG~~ 42 (450)
T 1ges_A 2 TKHYDYIAIGGGSGGIASINRAAMYGQ-KCALIEAK-ELGGTC 42 (450)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHTTTC-CEEEEESS-CTTHHH
T ss_pred CccCCEEEECCCHHHHHHHHHHHhCCC-eEEEEcCC-CCCCcc
Confidence 346899999999999999999999998 69999997 789855
No 364
>3ihm_A Styrene monooxygenase A; rossman fold, anti-parallel beta strands, dimer, cavity, oxidoreductase; 2.30A {Pseudomonas putida}
Probab=97.14 E-value=0.00022 Score=91.59 Aligned_cols=35 Identities=34% Similarity=0.558 Sum_probs=31.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
+++||+|||||++||++|+.|+++|+ +|+|+||++
T Consensus 21 m~~~ViIVGaGpaGl~~A~~La~~G~-~V~viE~~~ 55 (430)
T 3ihm_A 21 MKKRIGIVGAGTAGLHLGLFLRQHDV-DVTVYTDRK 55 (430)
T ss_dssp --CEEEEECCHHHHHHHHHHHHHTTC-EEEEEESCC
T ss_pred CCCCEEEECCcHHHHHHHHHHHHCCC-eEEEEcCCC
Confidence 45799999999999999999999999 699999976
No 365
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=97.11 E-value=0.00015 Score=89.88 Aligned_cols=40 Identities=35% Similarity=0.449 Sum_probs=35.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEec----CCCCCce
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEK----YHTVGGM 60 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk----~~riGG~ 60 (2280)
+++||+|||||++|++||+.|+++|+ +|+|+|+ ...+||.
T Consensus 7 ~~~~vvIIG~G~aGl~~A~~l~~~g~-~v~lie~~~~~~~~~gg~ 50 (333)
T 1vdc_A 7 HNTRLCIVGSGPAAHTAAIYAARAEL-KPLLFEGWMANDIAPGGQ 50 (333)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CCEEECCSSBTTBCTTCG
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-eEEEEeccCccccCCCce
Confidence 35799999999999999999999998 6999999 5667764
No 366
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=97.11 E-value=0.00018 Score=93.90 Aligned_cols=41 Identities=34% Similarity=0.793 Sum_probs=37.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.++||+|||||++|++||..|++.|+ +|+|+|+++.+||.|
T Consensus 5 ~~~dvvIIGgG~aGl~aA~~l~~~g~-~V~liE~~~~~GG~~ 45 (474)
T 1zmd_A 5 IDADVTVIGSGPGGYVAAIKAAQLGF-KTVCIEKNETLGGTC 45 (474)
T ss_dssp EEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEECSSSSSHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCcCCcc
Confidence 45799999999999999999999998 699999999999954
No 367
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=97.10 E-value=0.00016 Score=94.73 Aligned_cols=44 Identities=25% Similarity=0.606 Sum_probs=37.9
Q ss_pred CCCCCCeEEEECccHHHHHHHHHHHh-CCCCceEEEe--------cCCCCCceE
Q 037878 17 CLPVNTRIGIVGGGPSGLSTAYALAK-LGYRNVTLLE--------KYHTVGGMC 61 (2280)
Q Consensus 17 ~~~~~~dV~IIGaGisGLsAA~~La~-~G~~~VtVlE--------k~~riGG~~ 61 (2280)
+|..++||+|||||++|++||++|++ .|+ +|+|+| +++.+||.|
T Consensus 3 ~M~~~~dvvVIGgG~aGl~aA~~la~~~G~-~V~liE~~~~~~~~~~~~~GG~~ 55 (495)
T 2wpf_A 3 HMSKAFDLVVIGAGSGGLEAGWNAATLYGK-RVAVVDVQTSHGPPFYAALGGTC 55 (495)
T ss_dssp CCCEEEEEEEECCSHHHHHHHHHHHHHHCC-CEEEEESCSSSBTTTBCBTTHHH
T ss_pred CcccccCEEEECCChhHHHHHHHHHHhcCC-eEEEEecccccccccCCCCCCee
Confidence 34446899999999999999999999 998 699999 467889854
No 368
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=97.10 E-value=0.00017 Score=88.75 Aligned_cols=40 Identities=25% Similarity=0.458 Sum_probs=35.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
|+++||+|||||++||+||+.|+++|+ +|+|+|+ +.+||.
T Consensus 3 ~~~~~vvIIG~G~aGl~aA~~l~~~g~-~v~lie~-~~~gg~ 42 (320)
T 1trb_A 3 TKHSKLLILGSGPAGYTAAVYAARANL-QPVLITG-MEKGGQ 42 (320)
T ss_dssp EEEEEEEEECCSHHHHHHHHHHHTTTC-CCEEECC-SSTTGG
T ss_pred CCcCCEEEECcCHHHHHHHHHHHHCCC-cEEEEcc-CCCCce
Confidence 346799999999999999999999998 6999997 478884
No 369
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=97.10 E-value=0.00019 Score=93.64 Aligned_cols=41 Identities=29% Similarity=0.559 Sum_probs=36.4
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.++||+|||||++|++||++|++.|. +|+|+|++ .+||.|
T Consensus 9 ~~~~dVvVIGgG~aGl~aA~~l~~~g~-~V~liE~~-~~GG~~ 49 (479)
T 2hqm_A 9 TKHYDYLVIGGGSGGVASARRAASYGA-KTLLVEAK-ALGGTC 49 (479)
T ss_dssp -CEEEEEEECCSHHHHHHHHHHHHTSC-CEEEEESS-CTTHHH
T ss_pred cccCCEEEEcCCHHHHHHHHHHHHCCC-cEEEEeCC-CcCCcC
Confidence 346899999999999999999999998 69999997 788855
No 370
>2gjc_A Thiazole biosynthetic enzyme, mitochondrial; glutathione reductase type II family, thiazole synthase, mitochondria DNA repair; HET: AHZ; 1.82A {Saccharomyces cerevisiae} PDB: 3fpz_A*
Probab=97.09 E-value=0.00024 Score=86.04 Aligned_cols=37 Identities=43% Similarity=0.665 Sum_probs=34.9
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG 59 (2280)
.||+|||||++||+||+.|+++ |+ +|+|+|+++.+||
T Consensus 66 ~dv~IiG~G~aGl~aA~~la~~~~g~-~V~v~e~~~~~gg 104 (326)
T 2gjc_A 66 SDVIIVGAGSSGLSAAYVIAKNRPDL-KVCIIESSVAPGG 104 (326)
T ss_dssp ESEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSSSCCT
T ss_pred CCEEEECccHHHHHHHHHHHhcCCCC-eEEEEecCccccc
Confidence 4999999999999999999998 98 6999999999987
No 371
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=97.08 E-value=0.00018 Score=93.87 Aligned_cols=40 Identities=33% Similarity=0.639 Sum_probs=36.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.++||+|||||++||+||++|++.|+ +|+|+|++ .+||.|
T Consensus 19 ~~~dVvIIGgG~aGl~aA~~la~~G~-~V~liE~~-~~GG~~ 58 (478)
T 3dk9_A 19 ASYDYLVIGGGSGGLASARRAAELGA-RAAVVESH-KLGGTC 58 (478)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-CTTHHH
T ss_pred CCCCEEEECCCHHHHHHHHHHHhCCC-eEEEEecC-CCCCcc
Confidence 46899999999999999999999998 69999975 889854
No 372
>3g3e_A D-amino-acid oxidase; FAD, flavoprotein, oxidoreductase, PER; HET: FAD G3E; 2.20A {Homo sapiens} PDB: 3cuk_A* 2e48_A* 2e49_A* 2e4a_A* 2e82_A* 2du8_A* 1ve9_A* 1dao_A* 1ddo_A* 1kif_A* 1an9_A* 1evi_A*
Probab=97.08 E-value=0.0002 Score=89.58 Aligned_cols=37 Identities=24% Similarity=0.329 Sum_probs=32.8
Q ss_pred CeEEEECccHHHHHHHHHHHhCC------CCceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLG------YRNVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G------~~~VtVlEk~~riGG 59 (2280)
+||+|||||++||++|++|+++| . +|+|+|++...+|
T Consensus 1 mdVvIIGgGi~Gls~A~~La~~G~~~~p~~-~V~vlE~~~~~~~ 43 (351)
T 3g3e_A 1 MRVVVIGAGVIGLSTALCIHERYHSVLQPL-DIKVYADRFTPLT 43 (351)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHHTTTSSSC-EEEEEESSCGGGS
T ss_pred CcEEEECCCHHHHHHHHHHHHhccccCCCc-eEEEEECCCCCCC
Confidence 59999999999999999999998 7 6999999875443
No 373
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=97.03 E-value=0.00027 Score=91.72 Aligned_cols=39 Identities=36% Similarity=0.704 Sum_probs=36.6
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+||+|||||++|++||.+|++.|+ +|+|+|+++.+||.|
T Consensus 2 ~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~~~~~GG~~ 40 (455)
T 2yqu_A 2 YDLLVIGAGPGGYVAAIRAAQLGM-KVGVVEKEKALGGTC 40 (455)
T ss_dssp EEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSSSSSHHH
T ss_pred CCEEEECCChhHHHHHHHHHHCCC-eEEEEeCCCCCCCcc
Confidence 699999999999999999999998 699999999999954
No 374
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=97.03 E-value=0.00035 Score=95.69 Aligned_cols=44 Identities=34% Similarity=0.548 Sum_probs=39.7
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEEE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCES 63 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~t 63 (2280)
..++||+|||||++||+||+.|+++|+ +|+|+|+++++||.+..
T Consensus 387 ~~~~~VvIIGgGpAGl~aA~~L~~~G~-~Vtlie~~~~~GG~~~~ 430 (729)
T 1o94_A 387 KNKDSVLIVGAGPSGSEAARVLMESGY-TVHLTDTAEKIGGHLNQ 430 (729)
T ss_dssp SSCCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSTTTTHHH
T ss_pred cCCceEEEECCCHHHHHHHHHHHHCCC-eEEEEeCCCCcCCeeee
Confidence 346799999999999999999999998 69999999999997643
No 375
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=97.01 E-value=0.00023 Score=93.12 Aligned_cols=39 Identities=31% Similarity=0.492 Sum_probs=35.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++||+||.+|++.|. +|+|+|++ .+||.|
T Consensus 8 ~~DvvVIGgG~aGl~aA~~la~~G~-~V~liE~~-~~GGtc 46 (492)
T 3ic9_A 8 NVDVAIIGTGTAGMGAYRAAKKHTD-KVVLIEGG-AYGTTC 46 (492)
T ss_dssp EEEEEEECCSHHHHHHHHHHHTTCS-CEEEEESS-CSSCHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-cEEEEeCC-CCCCcc
Confidence 4799999999999999999999998 69999996 599865
No 376
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.98 E-value=0.00027 Score=91.69 Aligned_cols=40 Identities=38% Similarity=0.771 Sum_probs=36.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.++||+|||||++|++||.+|++.|+ +|+|+|+ +.+||.|
T Consensus 4 ~~~dvvIIG~G~aGl~aA~~l~~~g~-~V~lie~-~~~GG~~ 43 (458)
T 1lvl_A 4 IQTTLLIIGGGPGGYVAAIRAGQLGI-PTVLVEG-QALGGTC 43 (458)
T ss_dssp EECSEEEECCSHHHHHHHHHHHHHTC-CEEEECS-SCTTHHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-EEEEEcc-CCCCCcC
Confidence 45799999999999999999999998 6999999 8899965
No 377
>3c4a_A Probable tryptophan hydroxylase VIOD; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.30A {Chromobacterium violaceum atcc 12472}
Probab=96.96 E-value=0.00048 Score=87.06 Aligned_cols=35 Identities=29% Similarity=0.507 Sum_probs=32.8
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~ri 57 (2280)
+||+|||||++||++|+.|+++ |+ +|+|+||++.+
T Consensus 1 ~dV~IVGaG~aGl~~A~~L~~~~~G~-~V~v~E~~~~~ 37 (381)
T 3c4a_A 1 MKILVIGAGPAGLVFASQLKQARPLW-AIDIVEKNDEQ 37 (381)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHhcCCCC-CEEEEECCCCC
Confidence 4899999999999999999999 98 69999998876
No 378
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=96.93 E-value=0.00038 Score=91.11 Aligned_cols=41 Identities=32% Similarity=0.592 Sum_probs=36.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEec--------CCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEK--------YHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk--------~~riGG~~ 61 (2280)
.++||+|||||++||+||.+|++.|. +|+|+|| +..+||.|
T Consensus 5 ~~~DvvVIG~G~aGl~aA~~la~~G~-~V~liEk~~~~~~~~~~~~GGtc 53 (488)
T 3dgz_A 5 QSFDLLVIGGGSGGLACAKEAAQLGK-KVAVADYVEPSPRGTKWGLGGTC 53 (488)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECCCCCCTTSCCCCTTCHH
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC-eEEEEEecccccccccCCcCCee
Confidence 45799999999999999999999998 6999998 56788854
No 379
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=96.92 E-value=0.00036 Score=91.24 Aligned_cols=40 Identities=25% Similarity=0.628 Sum_probs=36.1
Q ss_pred CCeEEEECccHHHHHHHHHHHh-CCCCceEEEe--------cCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAK-LGYRNVTLLE--------KYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~-~G~~~VtVlE--------k~~riGG~~ 61 (2280)
++||+|||||++|++||++|++ .|+ +|+|+| +++.+||.|
T Consensus 3 ~~dvvVIGgG~aGl~aA~~la~~~G~-~V~liE~~~~~~~~~~~~~GG~c 51 (490)
T 1fec_A 3 AYDLVVIGAGSGGLEAGWNAASLHKK-RVAVIDLQKHHGPPHYAALGGTC 51 (490)
T ss_dssp SEEEEEECCSHHHHHHHHHHHHHHCC-CEEEEESCSSSBTTTBSCTTCHH
T ss_pred cccEEEECCCHHHHHHHHHHHHHcCC-EEEEEecccccccccCCCcCccc
Confidence 5799999999999999999999 998 699999 467889854
No 380
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=96.92 E-value=0.0003 Score=91.41 Aligned_cols=39 Identities=31% Similarity=0.640 Sum_probs=35.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++|++||..|++.|+ +|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGaG~aGl~aA~~l~~~G~-~V~liE~~-~~gG~~ 41 (464)
T 2a8x_A 3 HYDVVVLGAGPGGYVAAIRAAQLGL-STAIVEPK-YWGGVC 41 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEeCC-CCCCcc
Confidence 4799999999999999999999998 69999998 788844
No 381
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.91 E-value=0.00033 Score=90.99 Aligned_cols=39 Identities=36% Similarity=0.659 Sum_probs=35.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++|++||..|++.|+ +|+|+|+++ +||.|
T Consensus 6 ~~dvvIIG~G~aG~~aA~~l~~~g~-~V~lie~~~-~GG~~ 44 (464)
T 2eq6_A 6 TYDLIVIGTGPGGYHAAIRAAQLGL-KVLAVEAGE-VGGVC 44 (464)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSC-TTHHH
T ss_pred cCCEEEECcCHHHHHHHHHHHHCCC-eEEEEeCCC-CCCCC
Confidence 5799999999999999999999998 699999987 89854
No 382
>3c4n_A Uncharacterized protein DR_0571; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.40A {Deinococcus radiodurans R1}
Probab=96.87 E-value=0.00046 Score=88.00 Aligned_cols=38 Identities=26% Similarity=0.384 Sum_probs=33.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG 59 (2280)
++||+|||||++|+++|+.|+++ |. +|+|+|+++..+|
T Consensus 36 ~~dVvIIGaGi~Gls~A~~La~~~pG~-~V~vlE~~~~~~~ 75 (405)
T 3c4n_A 36 AFDIVVIGAGRMGAACAFYLRQLAPGR-SLLLVEEGGLPNE 75 (405)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHHCTTS-CEEEECSSCSSCT
T ss_pred cCCEEEECCcHHHHHHHHHHHhcCCCC-eEEEEeCCCCCCc
Confidence 37999999999999999999999 98 6999999865554
No 383
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=96.86 E-value=0.00033 Score=91.92 Aligned_cols=39 Identities=38% Similarity=0.591 Sum_probs=35.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhC---CCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL---GYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~---G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++|++||++|++. |+ +|+|+|+++ +||.|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~~~~G~-~V~liE~~~-~GG~~ 43 (499)
T 1xdi_A 2 VTRIVILGGGPAGYEAALVAATSHPETT-QVTVIDCDG-IGGAA 43 (499)
T ss_dssp CEEEEEECCSHHHHHHHHHHHHHCTTTE-EEEEEESSC-TTHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCCCcC-EEEEEeCCC-cCCcc
Confidence 47999999999999999999999 98 699999988 99954
No 384
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=96.85 E-value=0.00054 Score=89.52 Aligned_cols=34 Identities=26% Similarity=0.403 Sum_probs=31.2
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEec
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEK 53 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk 53 (2280)
+.++||+|||||++|++||++|+++|+ +|+|+||
T Consensus 7 ~~~~DvvVIGgG~aGl~aA~~la~~G~-~V~liEk 40 (483)
T 3dgh_A 7 SYDYDLIVIGGGSAGLACAKEAVLNGA-RVACLDF 40 (483)
T ss_dssp CCSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECC
T ss_pred CCCCCEEEECcCHHHHHHHHHHHHCCC-EEEEEEe
Confidence 346899999999999999999999998 6999995
No 385
>2rgh_A Alpha-glycerophosphate oxidase; flavoprotein oxidase, oxidoreductase; HET: FAD; 2.30A {Streptococcus SP} PDB: 2rgo_A*
Probab=96.85 E-value=0.00063 Score=90.38 Aligned_cols=38 Identities=29% Similarity=0.406 Sum_probs=34.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||++|+++|+.|+++|. +|+|+||++..+|
T Consensus 32 ~~DVvVIGgGi~G~~~A~~La~rG~-~V~LlE~~~~~~G 69 (571)
T 2rgh_A 32 ELDLLIIGGGITGAGVAVQAAASGI-KTGLIEMQDFAEG 69 (571)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSTTCS
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-cEEEEeCCCCCCC
Confidence 5799999999999999999999999 6999999876665
No 386
>3pl8_A Pyranose 2-oxidase; substrate complex, H167A mutant, homotetramer, GMC oxidoredu PHBH fold, rossmann domain, oxidoreductase; HET: FAD MES G3F; 1.35A {Trametes ochracea} PDB: 2igo_A* 3lsm_A* 2ign_A* 3k4c_A* 1tt0_A* 2igk_A* 3k4b_A* 3lsk_A* 3bg6_A* 3lsh_A* 3lsi_A* 2igm_A* 3k4j_A* 3k4m_A* 3bg7_A* 3k4k_A* 3k4l_A* 3bly_A* 1tzl_A* 3fdy_A* ...
Probab=96.83 E-value=0.00061 Score=91.16 Aligned_cols=42 Identities=29% Similarity=0.471 Sum_probs=37.1
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
+.++||+|||||++|++||+.|+++|+ +|+|+||.+..||.+
T Consensus 44 ~~~~dvvIIG~G~aGl~aA~~l~~~G~-~V~liE~~~~~gg~~ 85 (623)
T 3pl8_A 44 DIKYDVVIVGSGPIGCTYARELVGAGY-KVAMFDIGEIDSGLK 85 (623)
T ss_dssp --CEEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCCCSSSS
T ss_pred cccCCEEEECCcHHHHHHHHHHHhCCC-cEEEEeccCCCCCcc
Confidence 345799999999999999999999999 699999999999843
No 387
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.81 E-value=0.00052 Score=89.97 Aligned_cols=39 Identities=33% Similarity=0.626 Sum_probs=35.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++|++||.+|++.|. +|+|+|++ .+||.|
T Consensus 2 ~~dVvIIGgG~aGl~aA~~l~~~g~-~V~liE~~-~~GG~c 40 (500)
T 1onf_A 2 VYDLIVIGGGSGGMAAARRAARHNA-KVALVEKS-RLGGTC 40 (500)
T ss_dssp CBSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-STTHHH
T ss_pred ccCEEEECCCHHHHHHHHHHHHCCC-cEEEEeCC-CcCccc
Confidence 4799999999999999999999998 69999998 588854
No 388
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.81 E-value=0.00048 Score=89.29 Aligned_cols=39 Identities=44% Similarity=0.757 Sum_probs=35.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
++||+|||||++|++||.+|++.|+ +|+|+|++ .+||.+
T Consensus 3 ~~dvvIIGgG~aGl~aA~~l~~~g~-~V~lie~~-~~gG~~ 41 (455)
T 1ebd_A 3 ETETLVVGAGPGGYVAAIRAAQLGQ-KVTIVEKG-NLGGVC 41 (455)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS-CTTHHH
T ss_pred cCCEEEECCCHHHHHHHHHHHhCCC-eEEEEECC-CCCCcC
Confidence 4799999999999999999999998 69999998 889854
No 389
>2eq6_A Pyruvate dehydrogenase complex, dihydrolipoamide dehydrogenase E3 component; oxidoreductase, homodimer, structural genomics, NPPSFA; HET: FAD; 1.60A {Thermus thermophilus} PDB: 2eq8_A* 2eq9_A*
Probab=96.81 E-value=0.0037 Score=81.02 Aligned_cols=36 Identities=33% Similarity=0.587 Sum_probs=33.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+.+|..|++.|. +|+|+|+.+++
T Consensus 169 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 204 (464)
T 2eq6_A 169 PKRLLVIGGGAVGLELGQVYRRLGA-EVTLIEYMPEI 204 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHCCC-eEEEEEcCCcc
Confidence 3689999999999999999999998 69999998765
No 390
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=96.79 E-value=0.00087 Score=91.17 Aligned_cols=42 Identities=33% Similarity=0.585 Sum_probs=38.6
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
.++||+|||||++||+||..|+++|+ +|+|+|+++++||.+.
T Consensus 372 ~~~~vvIIGgG~AGl~aA~~l~~~g~-~V~lie~~~~~gg~~~ 413 (671)
T 1ps9_A 372 QKKNLAVVGAGPAGLAFAINAAARGH-QVTLFDAHSEIGGQFN 413 (671)
T ss_dssp SCCEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSSSCTTHH
T ss_pred CCCeEEEECCCHHHHHHHHHHHhCCC-eEEEEeCCCCCCCeee
Confidence 45799999999999999999999998 6999999999999753
No 391
>3brk_X Glucose-1-phosphate adenylyltransferase; ADP-glucose pyrophosphorylase, allostery, kinetics, structure-function relationships; 2.10A {Agrobacterium tumefaciens}
Probab=96.74 E-value=0.0014 Score=83.94 Aligned_cols=68 Identities=10% Similarity=0.116 Sum_probs=49.8
Q ss_pred CCEECCCcEECccccCCCCceEECCCCEeCCCCEEeeccccCCceeecCEEECCCcEECCCCEECCCCEECCCCEECcCC
Q 037878 1317 GAKLGSSVLLDTVDITDPSLVLIGDGAVISEGALIQSHEVKNGVLSFQPIKIARKVSVGPYAVIQKGSVIGEEAEVAPLQ 1396 (2280)
Q Consensus 1317 Ga~Ig~~v~i~~~~~~~~~~~~IG~~~~I~~~~~l~~~~~~~~~~~~~~i~Ig~~~~iG~~~~i~pg~~ig~~a~ig~~s 1396 (2280)
++.||++|.|....+ ...+||++|.|+++|.|. ..+||++|+||++|+|.. ++||+|+.||+++
T Consensus 324 ~~~ig~~~~I~~~~i---~~~~ig~~~~I~~~~~i~------------~~~i~~~~~i~~~~~i~~-~~ig~~~~i~~~~ 387 (420)
T 3brk_X 324 SSVVSGDCIISGAAL---NRSLLFTGVRANSYSRLE------------NAVVLPSVKIGRHAQLSN-VVIDHGVVIPEGL 387 (420)
T ss_dssp SCEECSSCEEESCEE---ESCEECTTCEECTTCEEE------------EEEECTTCEECTTCEEEE-EEECTTCEECTTC
T ss_pred CCEECCCCEEcCCEE---eCcEEcCCCEECCCCEEc------------ceEEcCCCEECCCCEEec-eEECCCCEECCCC
Confidence 567777777733233 246777777777777775 345899999999998884 8888888888888
Q ss_pred ccCC
Q 037878 1397 KSEG 1400 (2280)
Q Consensus 1397 ~v~~ 1400 (2280)
+|..
T Consensus 388 ~i~~ 391 (420)
T 3brk_X 388 IVGE 391 (420)
T ss_dssp EESS
T ss_pred EEeC
Confidence 7754
No 392
>3kd9_A Coenzyme A disulfide reductase; PSI-II, NYSGXRC, oxidoreductase, structural genomics structure initiative; 2.75A {Pyrococcus horikoshii}
Probab=96.71 E-value=0.00087 Score=86.69 Aligned_cols=39 Identities=28% Similarity=0.518 Sum_probs=34.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riGG 59 (2280)
+++||+|||||++||+||+.|++. |. +|+|+|+++.+++
T Consensus 2 ~~~~VvIIGgG~aGl~aA~~L~~~~~~~-~V~vie~~~~~~~ 42 (449)
T 3kd9_A 2 SLKKVVIIGGGAAGMSAASRVKRLKPEW-DVKVFEATEWVSH 42 (449)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHCTTS-EEEEECSSSCCC-
T ss_pred CcCcEEEECCcHHHHHHHHHHHHhCcCC-CEEEEECCCcccc
Confidence 357999999999999999999998 66 7999999987764
No 393
>1lqt_A FPRA; NADP+ derivative, oxidoreductase, structural G PSI, protein structure initiative, TB structural genomics consortium, TBSGC; HET: FAD ODP; 1.05A {Mycobacterium tuberculosis} SCOP: c.3.1.1 c.4.1.1 PDB: 1lqu_A* 2c7g_A*
Probab=96.68 E-value=0.00063 Score=87.75 Aligned_cols=41 Identities=37% Similarity=0.425 Sum_probs=37.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-C------CCCceEEEecCCCCCceE
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAK-L------GYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~-~------G~~~VtVlEk~~riGG~~ 61 (2280)
.++||+|||||++|++||.+|++ . |+ +|+|||+++.+||.+
T Consensus 2 ~~~~VvIIG~G~aGl~aA~~L~~~~~~~~~~g~-~V~lie~~~~~gg~~ 49 (456)
T 1lqt_A 2 RPYYIAIVGSGPSAFFAAASLLKAADTTEDLDM-AVDMLEMLPTPWGLV 49 (456)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHHHHHSTTCCE-EEEEEESSSSCSTHH
T ss_pred CCCEEEEECcCHHHHHHHHHHHhhCccccCCCC-eEEEEecCCCCCCcc
Confidence 35799999999999999999999 7 88 699999999999865
No 394
>3g5s_A Methylenetetrahydrofolate--tRNA-(uracil-5-)- methyltransferase TRMFO; tRNA methyltransferase FAD folate, FAD, flavoprotein; HET: MSE FAD GSH; 1.05A {Thermus thermophilus} PDB: 3g5q_A* 3g5r_A*
Probab=96.66 E-value=0.0013 Score=79.92 Aligned_cols=37 Identities=32% Similarity=0.502 Sum_probs=34.0
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+||+|||||++|+.||+.|+++|+ +|+|+|++...+.
T Consensus 2 ~dViVIGgG~AG~~AA~~la~~G~-~V~liE~~~~~~t 38 (443)
T 3g5s_A 2 ERVNVVGAGLAGSEAAWTLLRLGV-PVRLFEMRPKRMT 38 (443)
T ss_dssp CCEEEECCSHHHHHHHHHHHHTTC-CEEEECCTTTSCC
T ss_pred CCEEEECchHHHHHHHHHHHHCCC-cEEEEeccCCcCC
Confidence 689999999999999999999999 6999999886654
No 395
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=96.65 E-value=0.00093 Score=86.47 Aligned_cols=36 Identities=36% Similarity=0.498 Sum_probs=33.9
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
+||+|||||++||+||++|+++ |. +|+|+|+++.+|
T Consensus 3 ~~VvIIGgG~AGl~aA~~L~~~~~g~-~V~vie~~~~~g 40 (452)
T 3oc4_A 3 LKIVIIGASFAGISAAIASRKKYPQA-EISLIDKQATVG 40 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCSSS-EEEEECSSSCCS
T ss_pred CCEEEECCCHHHHHHHHHHHhhCcCC-cEEEEECCCCCc
Confidence 6999999999999999999998 87 799999999887
No 396
>2bs2_A Quinol-fumarate reductase flavoprotein subunit A; 2Fe-2S, 3Fe-4S, 4Fe-4S, citric acid cycle, dihaem cytochrome B; HET: FAD HEM LMT; 1.78A {Wolinella succinogenes} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 2bs3_A* 1e7p_A* 2bs4_A* 1qlb_A*
Probab=96.62 E-value=0.00086 Score=89.98 Aligned_cols=38 Identities=24% Similarity=0.315 Sum_probs=34.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||++||+||+.|+++|. +|+|+||....+|
T Consensus 5 ~~DVvVIGgG~AGL~AAl~aae~G~-~V~vlEK~~~~~g 42 (660)
T 2bs2_A 5 YCDSLVIGGGLAGLRAAVATQQKGL-STIVLSLIPVKRS 42 (660)
T ss_dssp ECSEEEECCSHHHHHHHHHHHTTTC-CEEEECSSCGGGS
T ss_pred cccEEEECchHHHHHHHHHHHHCCC-cEEEEeccCCCCC
Confidence 5799999999999999999999998 6999999887655
No 397
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.59 E-value=0.0049 Score=77.78 Aligned_cols=36 Identities=25% Similarity=0.427 Sum_probs=33.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+.+|..|++.|. +|+|+|+++++
T Consensus 145 ~~~v~ViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 180 (384)
T 2v3a_A 145 KRRVLLLGAGLIGCEFANDLSSGGY-QLDVVAPCEQV 180 (384)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEecCcch
Confidence 5789999999999999999999998 69999997764
No 398
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*
Probab=96.55 E-value=0.00037 Score=106.49 Aligned_cols=71 Identities=20% Similarity=0.230 Sum_probs=0.0
Q ss_pred HHHHHHHHHHHHhCCC-CccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHHHHhh
Q 037878 1082 IVEFLKGLVSEQTGIP-ITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASFSENL 1153 (2280)
Q Consensus 1082 ~e~~l~~iw~~vLg~~-~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~l~~~ 1153 (2280)
.++.|.++|+++|+++ .++|+.+++||+||||||+|++|.+.+++.+|+.+++.+|++ +|+..|++.+...
T Consensus 2124 ~~~~l~~~~a~vL~~~~~~~i~~~~~~~~lG~DSL~avelr~~i~~~~~~~l~~~~i~~-~t~~~la~~~~~~ 2195 (2512)
T 2vz8_A 2124 SQKDLVKAVAHILGIRDVASINPDSTLVDLGLDSLMGVEVRQILEREHDLVLSMREVRQ-LSLRKLQELSSKT 2195 (2512)
T ss_dssp -------------------------------------------------------------------------
T ss_pred hHHHHHHHHHHHhCCCcccccCCCCchHHhCcchHHHHHHHHHHHHHhCCcccHHHHHh-hhHHHHHHHHhhc
Confidence 4567999999999986 467999999999999999999999999999999999999988 8999999987653
No 399
>3cp8_A TRNA uridine 5-carboxymethylaminomethyl modification enzyme GIDA; rossmann fold, FAD-binding domain, dinucleotide-binding motif; HET: FAD; 3.20A {Chlorobium tepidum}
Probab=96.54 E-value=0.0013 Score=86.54 Aligned_cols=41 Identities=24% Similarity=0.276 Sum_probs=34.8
Q ss_pred CCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC-CCCc
Q 037878 18 LPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH-TVGG 59 (2280)
Q Consensus 18 ~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~-riGG 59 (2280)
...++||+|||||++|++||+.|++.|. +|+|+|++. .+|+
T Consensus 18 ~~~~yDVIVIGgG~AGl~AAlaLAr~G~-kVlLIEk~~~~iG~ 59 (641)
T 3cp8_A 18 GSHMYDVIVVGAGHAGCEAALAVARGGL-HCLLITSDLSAVAR 59 (641)
T ss_dssp --CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESCGGGTTC
T ss_pred ccCcCCEEEECccHHHHHHHHHHHHCCC-cEEEEEecccccCC
Confidence 3446899999999999999999999998 699999975 4654
No 400
>2e5v_A L-aspartate oxidase; archaea, oxidoreductase; HET: FAD; 2.09A {Sulfolobus tokodaii}
Probab=96.54 E-value=0.0014 Score=85.00 Aligned_cols=36 Identities=44% Similarity=0.607 Sum_probs=32.9
Q ss_pred eEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCce
Q 037878 23 RIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGM 60 (2280)
Q Consensus 23 dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~ 60 (2280)
||+|||||++||+||+.|+++|. +|+|+||. ..||.
T Consensus 1 DVvVIG~G~AGl~aA~~la~~G~-~V~viek~-~~~g~ 36 (472)
T 2e5v_A 1 MIYIIGSGIAGLSAGVALRRAGK-KVTLISKR-IDGGS 36 (472)
T ss_dssp CEEEECCSHHHHHHHHHHHHTTC-CEEEECSS-TTCSS
T ss_pred CEEEECCCHHHHHHHHHHHHCCC-CEEEEeCC-CCCch
Confidence 79999999999999999999998 69999998 66663
No 401
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=96.53 E-value=0.0016 Score=85.23 Aligned_cols=38 Identities=11% Similarity=0.247 Sum_probs=34.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCC---CCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLG---YRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G---~~~VtVlEk~~riG 58 (2280)
+++||+|||||++|++||..|++.| . +|+|+|+++.+|
T Consensus 34 m~~dvvIIGaG~aGl~aA~~l~~~g~~~~-~V~lie~~~~~~ 74 (490)
T 2bc0_A 34 WGSKIVVVGANHAGTACIKTMLTNYGDAN-EIVVFDQNSNIS 74 (490)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHHGGGS-EEEEECSSSCCS
T ss_pred cCCcEEEECCCHHHHHHHHHHHhcCCCCC-eEEEEECCCCCC
Confidence 3589999999999999999999988 7 699999988764
No 402
>2e4g_A Tryptophan halogenase; flavin-binding, rebeccamycin biosynthesis, biosynthetic protein, flavoprotein; HET: TRP; 2.08A {Lechevalieria aerocolonigenes} PDB: 2o9z_A 2oa1_A* 2oal_A* 2oam_A
Probab=96.52 E-value=0.0015 Score=86.54 Aligned_cols=35 Identities=37% Similarity=0.420 Sum_probs=32.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHh---CCCCceEEEecCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAK---LGYRNVTLLEKYH 55 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~---~G~~~VtVlEk~~ 55 (2280)
..+||+|||||++|++||+.|++ .|. +|+|+|+.+
T Consensus 24 ~~~dVvIVGgG~aGl~aA~~La~~~~~G~-~V~liE~~~ 61 (550)
T 2e4g_A 24 KIDKILIVGGGTAGWMAASYLGKALQGTA-DITLLQAPD 61 (550)
T ss_dssp CCCEEEEECCSHHHHHHHHHHHHHTTTSS-EEEEEECCC
T ss_pred CCCcEEEECCCHHHHHHHHHHHhhcCCCC-cEEEEeCCC
Confidence 35799999999999999999999 998 799999965
No 403
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=96.51 E-value=0.0013 Score=93.24 Aligned_cols=41 Identities=41% Similarity=0.827 Sum_probs=37.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~ 61 (2280)
.+||+|||||++||+||++|+++|+++|+|||+++++||..
T Consensus 187 ~~~VvVIGgGpAGl~aA~~L~~~G~~~Vtv~E~~~~~GG~~ 227 (1025)
T 1gte_A 187 SAKIALLGAGPASISCASFLARLGYSDITIFEKQEYVGGLS 227 (1025)
T ss_dssp GCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSSCSTHH
T ss_pred CCEEEEECccHHHHHHHHHHHhcCCCcEEEEeCCCCCCccc
Confidence 57999999999999999999999982399999999999964
No 404
>1y56_A Hypothetical protein PH1363; dehydrogenase, protein-protein complex, oxidoreductase; HET: FAD FMN ATP CXS; 2.86A {Pyrococcus horikoshii}
Probab=96.48 E-value=0.0007 Score=88.45 Aligned_cols=40 Identities=33% Similarity=0.592 Sum_probs=36.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
++||+|||||++||+||++|+++ + +|+|+|+++++||.+.
T Consensus 108 ~~dVvIIGgG~aGl~aA~~L~~~-~-~V~vie~~~~~GG~~~ 147 (493)
T 1y56_A 108 VVDVAIIGGGPAGIGAALELQQY-L-TVALIEERGWLGGDMW 147 (493)
T ss_dssp EESCCEECCSHHHHHHHHHHTTT-C-CEEEECTTSSSSCSGG
T ss_pred cCCEEEECccHHHHHHHHHHHhc-C-CEEEEeCCCCCCCeee
Confidence 45899999999999999999999 7 6999999999999653
No 405
>3h28_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3h27_A* 3h29_A* 3hyv_A* 3hyw_A* 3hyx_A*
Probab=96.47 E-value=0.0013 Score=84.64 Aligned_cols=38 Identities=29% Similarity=0.530 Sum_probs=34.6
Q ss_pred CCeEEEECccHHHHHHHHHHHh--CCCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAK--LGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~--~G~~~VtVlEk~~riGG 59 (2280)
++||+|||||++||+||++|++ .|+ +|+|+|++++.++
T Consensus 2 ~~~vvIIGgG~aGl~aA~~L~~~~~g~-~Vtlie~~~~~~~ 41 (430)
T 3h28_A 2 AKHVVVIGGGVGGIATAYNLRNLMPDL-KITLISDRPYFGF 41 (430)
T ss_dssp CCEEEEECSSHHHHHHHHHHHHHCTTC-EEEEECSSSEEEC
T ss_pred CCCEEEECccHHHHHHHHHHHcCCCCC-eEEEECCCCCCCc
Confidence 3699999999999999999999 788 6999999998765
No 406
>2gag_A Heterotetrameric sarcosine oxidase alpha-subunit; flavoenzyme, electron transfer, folate-ME enzyme, oxidoreductase; HET: NAD FAD FMN; 1.85A {Stenotrophomonas maltophilia} PDB: 2gah_A* 1x31_A* 1vrq_A* 3ad7_A* 3ad8_A* 3ad9_A* 3ada_A*
Probab=96.46 E-value=0.0012 Score=93.03 Aligned_cols=41 Identities=34% Similarity=0.566 Sum_probs=38.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCCceEE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVGGMCE 62 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riGG~~~ 62 (2280)
++||+|||||++||+||.+|++.|+ +|+|+|+++++||.+.
T Consensus 128 ~~dVvVIGaGpAGl~AA~~la~~G~-~V~lie~~~~~GG~~~ 168 (965)
T 2gag_A 128 HTDVLVVGAGPAGLAAAREASRSGA-RVMLLDERAEAGGTLL 168 (965)
T ss_dssp EEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSSSSSGGGG
T ss_pred CCCEEEECCCHHHHHHHHHHHhCCC-cEEEEeCCCCCCceec
Confidence 4689999999999999999999998 6999999999999876
No 407
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=96.45 E-value=0.0021 Score=82.54 Aligned_cols=38 Identities=29% Similarity=0.559 Sum_probs=33.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~ri 57 (2280)
+++||+|||||++|++||..|+++|++ +|+|+|+++.+
T Consensus 3 ~~~~vvIIGgG~aGl~aA~~l~~~g~~~~V~lie~~~~~ 41 (431)
T 1q1r_A 3 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRLVGDATVI 41 (431)
T ss_dssp CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCCSC
T ss_pred CCCcEEEEcCHHHHHHHHHHHHccCcCCCEEEEECCCCC
Confidence 458999999999999999999999973 59999998654
No 408
>2pyx_A Tryptophan halogenase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative biosynthetic protein; HET: MSE TLA PG4; 1.50A {Shewanella frigidimarina}
Probab=96.44 E-value=0.0018 Score=85.45 Aligned_cols=51 Identities=10% Similarity=-0.016 Sum_probs=37.7
Q ss_pred HHHHHHHHHhH-CCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEc
Q 037878 188 YTSLWQKLSKY-LPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIIS 241 (2280)
Q Consensus 188 ~~~l~~~la~~-lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A 241 (2280)
+.......+++ .|++++.+ +|++|+.+++++.+.+++.+|+ +++||.||.|
T Consensus 177 l~~~L~~~a~~~~Gv~i~~~-~v~~i~~~~~g~~~~v~~~~g~--~i~ad~vV~A 228 (526)
T 2pyx_A 177 FSQLLTEHCTQKLGVTHIRD-HVSQIINNQHGDIEKLITKQNG--EISGQLFIDC 228 (526)
T ss_dssp HHHHHHHHHHHTSCCEEEEC-CEEEEEECTTSCEEEEEESSSC--EEECSEEEEC
T ss_pred HHHHHHHHHHhcCCCEEEEe-EEEEEEecCCCcEEEEEECCCC--EEEcCEEEEC
Confidence 33444444455 78999999 6999998766654577777773 5999999998
No 409
>1cjc_A Protein (adrenodoxin reductase); flavoenzyme, MAD analysis, electron transferase, oxidoreductase; HET: FAD; 1.70A {Bos taurus} SCOP: c.3.1.1 c.4.1.1 PDB: 1e1k_A* 1e1l_A* 1e1m_A* 1e1n_A* 1e6e_A*
Probab=96.37 E-value=0.0018 Score=83.49 Aligned_cols=40 Identities=35% Similarity=0.463 Sum_probs=37.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC--CCceEEEecCCCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLG--YRNVTLLEKYHTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G--~~~VtVlEk~~riGG~~ 61 (2280)
.+||+|||||++|++||..|++.| . +|+|||+++++||.+
T Consensus 6 ~~~vvIIG~G~aGl~aA~~l~~~g~~~-~V~vie~~~~~gg~~ 47 (460)
T 1cjc_A 6 TPQICVVGSGPAGFYTAQHLLKHHSRA-HVDIYEKQLVPFGLV 47 (460)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHHCSSC-EEEEECSSSSSCTHH
T ss_pred CceEEEECcCHHHHHHHHHHHhcCCCC-CEEEEeCCCcCCcee
Confidence 579999999999999999999998 7 699999999999865
No 410
>2zxi_A TRNA uridine 5-carboxymethylaminomethyl modificat MNMG; modification, 5-carboxymethylaminomethyl uridine, WOBB uridine, FAD; HET: FAD; 2.30A {Aquifex aeolicus} PDB: 2zxh_A* 2e57_A*
Probab=96.36 E-value=0.002 Score=84.29 Aligned_cols=39 Identities=26% Similarity=0.502 Sum_probs=34.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC-CCCc
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH-TVGG 59 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~-riGG 59 (2280)
.++||+|||||++|++||+.|++.|. +|+|+|++. .+|+
T Consensus 26 ~~yDVIVIGgG~AGl~AAlalAr~G~-kVlLIEk~~~~iG~ 65 (637)
T 2zxi_A 26 DEFDVVVIGGGHAGIEAALAAARMGA-KTAMFVLNADTIGQ 65 (637)
T ss_dssp GCCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESCGGGTTC
T ss_pred CcCCEEEECCCHHHHHHHHHHHHCCC-CEEEEEecccccCC
Confidence 35899999999999999999999998 699999984 5653
No 411
>3h8l_A NADH oxidase; membrane protein, complete form, rossman-like fold, oxidoreductase; HET: FAD; 2.57A {Acidianus ambivalens} PDB: 3h8i_A*
Probab=96.35 E-value=0.0014 Score=83.69 Aligned_cols=37 Identities=24% Similarity=0.331 Sum_probs=33.5
Q ss_pred CeEEEECccHHHHHHHHHHHh---CCCCceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAK---LGYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~---~G~~~VtVlEk~~riGG 59 (2280)
+||+|||||++||+||++|++ .|+ +|+|+|+++..++
T Consensus 2 ~~VvIIGgG~aGl~aA~~L~~~~~~g~-~V~vie~~~~~~~ 41 (409)
T 3h8l_A 2 TKVLVLGGRFGALTAAYTLKRLVGSKA-DVKVINKSRFSYF 41 (409)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHGGGS-EEEEEESSSEEEE
T ss_pred CeEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEeCCCCcee
Confidence 589999999999999999999 898 7999999986543
No 412
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=96.35 E-value=0.0016 Score=85.29 Aligned_cols=40 Identities=33% Similarity=0.657 Sum_probs=34.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecC--------CCCCceE
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY--------HTVGGMC 61 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~--------~riGG~~ 61 (2280)
++||+|||||++|++||.++++.|. +|+|+|+. ..+||-|
T Consensus 42 dYDviVIG~GpaG~~aA~~aa~~G~-kValIE~~~~~~~~~k~~lGGtC 89 (542)
T 4b1b_A 42 DYDYVVIGGGPGGMASAKEAAAHGA-RVLLFDYVKPSSQGTKWGIGGTC 89 (542)
T ss_dssp SEEEEEECCSHHHHHHHHHHHTTTC-CEEEECCCCCCTTCCCCCSSHHH
T ss_pred CCCEEEECCCHHHHHHHHHHHHCCC-eEEEEeccccccccccCCCCCcc
Confidence 3799999999999999999999998 69999974 4578844
No 413
>3ces_A MNMG, tRNA uridine 5-carboxymethylaminomethyl modificat GIDA, GIDA; tRNA modification, FAD binding domain, structural genomics; 2.41A {Escherichia coli} PDB: 3cp2_A 3g05_A
Probab=96.35 E-value=0.002 Score=84.83 Aligned_cols=38 Identities=34% Similarity=0.498 Sum_probs=33.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC-CCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH-TVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~-riG 58 (2280)
.++||+|||||++|++||+.|++.|. +|+|+|++. .+|
T Consensus 27 ~~yDVIVIGgG~AGl~AAlaLAr~G~-kVlLIEk~~~~iG 65 (651)
T 3ces_A 27 DPFDVIIIGGGHAGTEAAMAAARMGQ-QTLLLTHNIDTLG 65 (651)
T ss_dssp SCEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESCGGGTT
T ss_pred CcCCEEEECChHHHHHHHHHHHhCCC-CEEEEeecccccc
Confidence 45799999999999999999999998 699999974 454
No 414
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=96.31 E-value=0.0025 Score=81.15 Aligned_cols=38 Identities=29% Similarity=0.505 Sum_probs=34.1
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCCCCCc
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYHTVGG 59 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~riGG 59 (2280)
+||+|||||++||+||..|+++|++ +|+|+|+++..+.
T Consensus 3 ~~vvIIGaG~AGl~aA~~L~~~g~~~~V~li~~~~~~~y 41 (410)
T 3ef6_A 3 THVAIIGNGVGGFTTAQALRAEGFEGRISLIGDEPHLPY 41 (410)
T ss_dssp CEEEEECCSHHHHHHHHHHHHTTCCSEEEEEECSSSSSB
T ss_pred CCEEEEcccHHHHHHHHHHHccCcCCeEEEEECCCCCCc
Confidence 5899999999999999999999972 3999999988764
No 415
>1kf6_A Fumarate reductase flavoprotein; respiration, fumarate reductace, succinate dehydrogenase, CO quinol, quinone, oxidoreductase; HET: FAD HQO CE1 1PE; 2.70A {Escherichia coli} SCOP: a.7.3.1 c.3.1.4 d.168.1.1 PDB: 1kfy_A* 1l0v_A* 2b76_A* 3cir_A* 3p4p_A* 3p4q_A* 3p4r_A* 3p4s_A*
Probab=96.31 E-value=0.0016 Score=86.89 Aligned_cols=38 Identities=29% Similarity=0.459 Sum_probs=34.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCC--CCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLG--YRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G--~~~VtVlEk~~riGG 59 (2280)
+.||+|||||++||+||+.|+++| . +|+|+||....+|
T Consensus 5 ~~DVvIVG~G~AGl~aAl~la~~G~~~-~V~vlEk~~~~~~ 44 (602)
T 1kf6_A 5 QADLAIVGAGGAGLRAAIAAAQANPNA-KIALISKVYPMRS 44 (602)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHCTTC-CEEEEESSCGGGS
T ss_pred cCCEEEECCCHHHHHHHHHHHhcCCCC-cEEEEeCCCCCCC
Confidence 469999999999999999999999 8 6999999877655
No 416
>1ges_A Glutathione reductase; oxidoreductase(flavoenzyme); HET: FAD; 1.74A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1geu_A* 1ger_A* 1get_A*
Probab=96.29 E-value=0.0086 Score=77.24 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=32.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+.+|..|++.|. +|+|+|+++++
T Consensus 167 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 202 (450)
T 1ges_A 167 PERVAVVGAGYIGVELGGVINGLGA-KTHLFEMFDAP 202 (450)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC-EEEEEEeCCch
Confidence 4689999999999999999999998 69999997654
No 417
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=96.29 E-value=0.0019 Score=84.27 Aligned_cols=42 Identities=17% Similarity=0.321 Sum_probs=35.6
Q ss_pred CCCCCCCeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 16 PCLPVNTRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 16 ~~~~~~~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
++++.++||+|||||++|++||..|+++ |. +|+|+|+++.++
T Consensus 6 ~~~~~~~~vvIIGgG~AGl~aA~~L~~~~~g~-~V~lie~~~~~~ 49 (493)
T 1m6i_A 6 DKAPSHVPFLLIGGGTAAFAAARSIRARDPGA-RVLIVSEDPELP 49 (493)
T ss_dssp --CCSEEEEEEESCSHHHHHHHHHHHHHSTTC-EEEEEESSSSCC
T ss_pred CCCCCcCCEEEECChHHHHHHHHHHHhcCCCC-eEEEEeCCCCCC
Confidence 4456678999999999999999999887 76 699999998765
No 418
>2v3a_A Rubredoxin reductase; alkane degradation, NADH oxidoreductase, rubredoxin reductas NAD, flavoprotein, oxidoreductase; HET: FAD; 2.4A {Pseudomonas aeruginosa} PDB: 2v3b_A*
Probab=96.24 E-value=0.0026 Score=80.36 Aligned_cols=37 Identities=19% Similarity=0.249 Sum_probs=31.6
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYH 55 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~ 55 (2280)
+.++||+|||||++|++||..|++.|.+ +|+|+|+++
T Consensus 2 ~~~~dvvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~ 39 (384)
T 2v3a_A 2 SERAPLVIIGTGLAGYNLAREWRKLDGETPLLMITADD 39 (384)
T ss_dssp --CCCEEEECCSHHHHHHHHHHHTTCSSSCEEEECSSC
T ss_pred CCCCcEEEECChHHHHHHHHHHHhhCCCCCEEEEECCC
Confidence 3468999999999999999999999952 589999976
No 419
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=96.22 E-value=0.0027 Score=80.82 Aligned_cols=39 Identities=18% Similarity=0.325 Sum_probs=34.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~riG 58 (2280)
+++||+|||||++|++||..|++.|++ +|+|+|+++.++
T Consensus 6 ~~~~vvIIG~G~aGl~aA~~l~~~g~~~~V~lie~~~~~~ 45 (408)
T 2gqw_A 6 LKAPVVVLGAGLASVSFVAELRQAGYQGLITVVGDEAERP 45 (408)
T ss_dssp CCSSEEEECCSHHHHHHHHHHHHHTCCSCEEEEESSCSCC
T ss_pred CCCcEEEECChHHHHHHHHHHHccCCCCeEEEEECCCCCc
Confidence 457999999999999999999999973 499999987653
No 420
>1v59_A Dihydrolipoamide dehydrogenase; 2-oxoacid dehydroganese complex, pyruvate dehydrogenase complex; HET: FAD NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1jeh_A*
Probab=96.21 E-value=0.011 Score=77.05 Aligned_cols=37 Identities=35% Similarity=0.604 Sum_probs=33.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.++|+|||||.+|+-+|..|++.|. +|+|+|+++++.
T Consensus 183 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~l 219 (478)
T 1v59_A 183 PKRLTIIGGGIIGLEMGSVYSRLGS-KVTVVEFQPQIG 219 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC-EEEEEEeCCccc
Confidence 4789999999999999999999998 699999987763
No 421
>3gyx_A Adenylylsulfate reductase; oxidoreductase; HET: FAD; 3.20A {Desulfovibrio gigas}
Probab=96.17 E-value=0.0024 Score=85.55 Aligned_cols=38 Identities=18% Similarity=0.318 Sum_probs=33.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhC------CCCceEEEecCCCCCc
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL------GYRNVTLLEKYHTVGG 59 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~------G~~~VtVlEk~~riGG 59 (2280)
+.||+|||||++||+||+.|+++ |. +|+|+||....++
T Consensus 22 ~~DVvVVG~G~AGL~AAl~aa~~~~~~~pG~-~V~vleK~~~~~s 65 (662)
T 3gyx_A 22 SVDLLMVGGGMGNCGAAFEAVRWADKYAPEA-KILLVDKASLERS 65 (662)
T ss_dssp ECSEEEECCSHHHHHHHHHHHHHHHHHCTTC-CEEEECSSCTTTC
T ss_pred EcCEEEECCCHHHHHHHHHHHhhccccCCCC-cEEEEEecCCCCC
Confidence 47999999999999999999997 98 6999999876544
No 422
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=96.15 E-value=0.0029 Score=84.91 Aligned_cols=35 Identities=26% Similarity=0.473 Sum_probs=31.8
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
..++||+|||||++||+||.+|+++|+ +|+|+|+.
T Consensus 105 ~~~~dvvVIG~GpAGl~aA~~l~~~g~-~v~liE~~ 139 (598)
T 2x8g_A 105 KYDYDLIVIGGGSGGLAAGKEAAKYGA-KTAVLDYV 139 (598)
T ss_dssp SSSEEEEEECCSHHHHHHHHHHHHTTC-CEEEECCC
T ss_pred cccccEEEECCCccHHHHHHHHHhCCC-eEEEEecc
Confidence 346899999999999999999999998 69999983
No 423
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.15 E-value=0.012 Score=76.03 Aligned_cols=38 Identities=26% Similarity=0.357 Sum_probs=33.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
..++|+|||||.+|+.+|..|++.|. +|+|+|+++++.
T Consensus 148 ~~~~vvIiG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~l 185 (447)
T 1nhp_A 148 EVNNVVVIGSGYIGIEAAEAFAKAGK-KVTVIDILDRPL 185 (447)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSTT
T ss_pred CCCeEEEECCCHHHHHHHHHHHHCCC-eEEEEecCcccc
Confidence 35799999999999999999999998 699999987653
No 424
>2yqu_A 2-oxoglutarate dehydrogenase E3 component; lipoamide dehydrogenase, 2-oxoglutarate dehydrogenase comple pyruvate dehydrogenase complex; HET: FAD; 1.70A {Thermus thermophilus} PDB: 2eq7_A*
Probab=96.12 E-value=0.013 Score=75.83 Aligned_cols=36 Identities=33% Similarity=0.534 Sum_probs=32.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+.+|..|++.|. +|+|+|+++++
T Consensus 167 ~~~vvIiGgG~~g~e~A~~l~~~g~-~V~lv~~~~~~ 202 (455)
T 2yqu_A 167 PKRLIVVGGGVIGLELGVVWHRLGA-EVIVLEYMDRI 202 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-EEEEEecCCcc
Confidence 4689999999999999999999998 69999997764
No 425
>3sx6_A Sulfide-quinone reductase, putative; sulfide:quinone oxidoreductase, Cys356Ala variant, integral membrane protein; HET: FAD LMT DCQ; 1.80A {Acidithiobacillus ferrooxidans} PDB: 3t0k_A* 3szc_A* 3sz0_A* 3t2z_A* 3t31_A* 3sy4_A* 3syi_A* 3sxi_A* 3t14_A* 3t2k_A* 3szw_A* 3szf_A* 3kpg_A* 3kpi_A* 3t2y_A* 3kpk_A*
Probab=96.11 E-value=0.0027 Score=81.63 Aligned_cols=35 Identities=29% Similarity=0.562 Sum_probs=32.3
Q ss_pred CCeEEEECccHHHHHHHHHHHh---CCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAK---LGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~---~G~~~VtVlEk~~r 56 (2280)
++||+|||||++|++||+.|++ .|+ +|+|+|++++
T Consensus 4 m~~vvIIGgG~aGl~aA~~L~~~~~~g~-~Vtlie~~~~ 41 (437)
T 3sx6_A 4 SAHVVILGAGTGGMPAAYEMKEALGSGH-EVTLISANDY 41 (437)
T ss_dssp SCEEEEECCSTTHHHHHHHHHHHHGGGS-EEEEECSSSE
T ss_pred CCcEEEECCcHHHHHHHHHHhccCCCcC-EEEEEeCCCC
Confidence 4799999999999999999999 888 6999999874
No 426
>1nhp_A NADH peroxidase; oxidoreductase (H2O2(A)); HET: FAD; 2.00A {Enterococcus faecalis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1npx_A* 1joa_A* 2npx_A* 1nhq_A* 1nhs_A* 1nhr_A* 1f8w_A*
Probab=96.09 E-value=0.0031 Score=81.43 Aligned_cols=36 Identities=17% Similarity=0.283 Sum_probs=32.9
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
+||+|||||++|++||..|++. |. +|+|+|+++.+|
T Consensus 1 ~dvvIIG~G~aGl~aA~~l~~~~~g~-~V~lie~~~~~~ 38 (447)
T 1nhp_A 1 MKVIVLGSSHGGYEAVEELLNLHPDA-EIQWYEKGDFIS 38 (447)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTS-EEEEEESSSSSS
T ss_pred CeEEEECCCHHHHHHHHHHHHhCcCC-eEEEEECCCccC
Confidence 5899999999999999999998 87 699999988765
No 427
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=96.09 E-value=0.0033 Score=81.33 Aligned_cols=36 Identities=17% Similarity=0.142 Sum_probs=32.9
Q ss_pred CeEEEECccHHHHHHHHHHHhC--CCCceEEEecCCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKL--GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~--G~~~VtVlEk~~riG 58 (2280)
+||+|||||++|++||.+|++. |. +|+|+|+++.+|
T Consensus 1 ~dvvIIGgG~aGl~aA~~l~~~~~g~-~V~lie~~~~~~ 38 (452)
T 2cdu_A 1 MKVIVVGCTHAGTFAVKQTIADHPDA-DVTAYEMNDNIS 38 (452)
T ss_dssp CEEEEECCSHHHHHHHHHHHHHCTTC-EEEEEESSSCCC
T ss_pred CeEEEECCCHHHHHHHHHHHhhCcCC-cEEEEECCCCCC
Confidence 5899999999999999999998 88 699999988764
No 428
>2qae_A Lipoamide, dihydrolipoyl dehydrogenase; FAD-cystine-oxidoreductase, homodimer; HET: FAD; 1.90A {Trypanosoma cruzi}
Probab=96.08 E-value=0.02 Score=74.22 Aligned_cols=36 Identities=31% Similarity=0.453 Sum_probs=32.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+|+|+.+++
T Consensus 174 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 209 (468)
T 2qae_A 174 PKTMVVIGGGVIGLELGSVWARLGA-EVTVVEFAPRC 209 (468)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHhCC-EEEEEecCCcc
Confidence 4789999999999999999999998 69999997765
No 429
>3ic9_A Dihydrolipoamide dehydrogenase; APC62701, colwellia psychrer 34H, structural genomics, PSI-2; HET: FAD; 2.15A {Colwellia psychrerythraea}
Probab=96.05 E-value=0.021 Score=74.53 Aligned_cols=36 Identities=28% Similarity=0.462 Sum_probs=33.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+++|+.+++
T Consensus 174 ~k~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 209 (492)
T 3ic9_A 174 PKSVAVFGPGVIGLELGQALSRLGV-IVKVFGRSGSV 209 (492)
T ss_dssp CSEEEEESSCHHHHHHHHHHHHTTC-EEEEECCTTCC
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-eEEEEEECCcc
Confidence 4789999999999999999999998 69999998775
No 430
>1ebd_A E3BD, dihydrolipoamide dehydrogenase; redox-active center, glycolysis, oxidoreductase; HET: FAD; 2.60A {Geobacillus stearothermophilus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=96.05 E-value=0.016 Score=74.77 Aligned_cols=36 Identities=31% Similarity=0.503 Sum_probs=33.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 170 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 205 (455)
T 1ebd_A 170 PKSLVVIGGGYIGIELGTAYANFGT-KVTILEGAGEI 205 (455)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCCcc
Confidence 4789999999999999999999998 69999997765
No 431
>1zmd_A Dihydrolipoyl dehydrogenase; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha- ketoglutarate dehydrogenase; HET: FAD NAI; 2.08A {Homo sapiens} PDB: 1zmc_A* 2f5z_A* 1zy8_A* 3rnm_A*
Probab=95.90 E-value=0.028 Score=73.05 Aligned_cols=36 Identities=25% Similarity=0.410 Sum_probs=33.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+++|+++++
T Consensus 178 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 213 (474)
T 1zmd_A 178 PEKMVVIGAGVIGVELGSVWQRLGA-DVTAVEFLGHV 213 (474)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CceEEEECCCHHHHHHHHHHHHcCC-EEEEEeccCcc
Confidence 4789999999999999999999998 69999998765
No 432
>2r9z_A Glutathione amide reductase; NAD, FAD, substrate specificity, oxidoreductase; HET: FAD; 2.10A {Marichromatium gracile} PDB: 2rab_A*
Probab=95.74 E-value=0.038 Score=71.42 Aligned_cols=36 Identities=28% Similarity=0.433 Sum_probs=32.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+.+|..|++.|. +|+|+|+++++
T Consensus 166 ~~~vvVvGgG~~g~e~A~~l~~~G~-~Vtlv~~~~~~ 201 (463)
T 2r9z_A 166 PKRVAIIGAGYIGIELAGLLRSFGS-EVTVVALEDRL 201 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEEcCCcc
Confidence 4689999999999999999999998 69999987654
No 433
>3ef6_A Toluene 1,2-dioxygenase system ferredoxin--NAD(+) reductase; FAD binding protein, NADH binding protein, aromatic hydrocar catabolism, FAD; HET: FAD; 1.80A {Pseudomonas putida} PDB: 4emi_A* 4emj_A*
Probab=95.71 E-value=0.017 Score=73.58 Aligned_cols=37 Identities=43% Similarity=0.548 Sum_probs=33.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..++|+|||||.+|+-+|..|++.|. +|+++|+.+++
T Consensus 142 ~~~~vvViGgG~~g~E~A~~l~~~g~-~Vtvv~~~~~~ 178 (410)
T 3ef6_A 142 SATRLLIVGGGLIGCEVATTARKLGL-SVTILEAGDEL 178 (410)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCcc
Confidence 35789999999999999999999998 69999997664
No 434
>4g6h_A Rotenone-insensitive NADH-ubiquinone oxidoreducta mitochondrial; rossmann fold, electron transfer, FAD, oxidoreductase; HET: FAD NAD; 2.26A {Saccharomyces cerevisiae} PDB: 4g6g_A* 4g73_A* 4g74_A* 4g9k_A* 4gap_A* 4gav_A*
Probab=95.70 E-value=0.0051 Score=80.18 Aligned_cols=41 Identities=20% Similarity=0.264 Sum_probs=35.8
Q ss_pred CCCCCCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 15 HPCLPVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 15 ~~~~~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.+...++++|+|||||.+|++||..|+++++ +|+|+|++++
T Consensus 36 ~p~~~~KprVVIIGgG~AGl~~A~~L~~~~~-~VtLId~~~~ 76 (502)
T 4g6h_A 36 DPQHSDKPNVLILGSGWGAISFLKHIDTKKY-NVSIISPRSY 76 (502)
T ss_dssp CCCSCSSCEEEEECSSHHHHHHHHHSCTTTC-EEEEEESSSE
T ss_pred CCCCCCCCCEEEECCcHHHHHHHHHhhhCCC-cEEEECCCCC
Confidence 3445567799999999999999999999998 7999999874
No 435
>4eqs_A Coenzyme A disulfide reductase; oxidoreductase; HET: COA FAD; 1.50A {Staphylococcus aureus subsp} PDB: 1yqz_A* 4eqw_A* 4em4_A* 4em3_A* 4eqr_A* 4emw_A* 4eqx_A*
Probab=95.70 E-value=0.0055 Score=78.63 Aligned_cols=37 Identities=22% Similarity=0.403 Sum_probs=32.1
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCC-ceEEEecCCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYR-NVTLLEKYHTVG 58 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~-~VtVlEk~~riG 58 (2280)
.+|+|||||++|++||.+|++.|.+ +|+|+|+++..+
T Consensus 1 PKVvIIG~G~AGl~aA~~l~~~g~~~~V~lie~~~~~~ 38 (437)
T 4eqs_A 1 PKIVVVGAVAGGATCASQIRRLDKESDIIIFEKDRDMS 38 (437)
T ss_dssp CCEEEECCSTTHHHHHHHHHHHCSSSCEEEEESSSCSS
T ss_pred CeEEEECCCHHHHHHHHHHHhCCCCCcEEEEeCCCCCC
Confidence 3699999999999999999999852 599999987654
No 436
>3urh_A Dihydrolipoyl dehydrogenase; PSI-biology, structural genomics, protein structure initiati YORK structural genomics research consortium; HET: FAD; 1.90A {Sinorhizobium meliloti}
Probab=95.69 E-value=0.031 Score=72.91 Aligned_cols=36 Identities=36% Similarity=0.536 Sum_probs=32.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.+++
T Consensus 198 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 233 (491)
T 3urh_A 198 PASMIVVGGGVIGLELGSVWARLGA-KVTVVEFLDTI 233 (491)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-EEEEEeccccc
Confidence 4689999999999999999999998 69999987654
No 437
>1xhc_A NADH oxidase /nitrite reductase; southe collaboratory for structural genomics, secsg, hyperthermoph protein structure initiative, PSI; HET: FAD; 2.35A {Pyrococcus furiosus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.66 E-value=0.0058 Score=76.47 Aligned_cols=35 Identities=31% Similarity=0.515 Sum_probs=31.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..||+|||||++|++||..|++.| +|+|+|+++..
T Consensus 8 ~~~vvIIGgG~AGl~aA~~l~~~g--~V~lie~~~~~ 42 (367)
T 1xhc_A 8 GSKVVIVGNGPGGFELAKQLSQTY--EVTVIDKEPVP 42 (367)
T ss_dssp -CEEEEECCSHHHHHHHHHHTTTS--EEEEECSSSSC
T ss_pred CCcEEEECCcHHHHHHHHHHhhcC--CEEEEECCCCC
Confidence 369999999999999999999999 59999997753
No 438
>3s5w_A L-ornithine 5-monooxygenase; class B flavin dependent N-hydroxylating monooxygenase, CLAS flavin dependent monooxygenase N-hydroxylating; HET: FAD ONH NAP; 1.90A {Pseudomonas aeruginosa} PDB: 3s61_A*
Probab=95.61 E-value=0.032 Score=72.20 Aligned_cols=44 Identities=16% Similarity=0.354 Sum_probs=35.6
Q ss_pred CCCceEeCcceEEEEEcCCccEEEEEeC-CCceEEEEeCEEEEcC
Q 037878 199 LPTEVHCNSEVLAIRRDSTTVGVDVKHS-NGECEVMEFDKIIISG 242 (2280)
Q Consensus 199 lg~~I~l~t~V~~I~~~~~~v~V~v~t~-~G~~~~i~aD~VI~A~ 242 (2280)
.+.+|+++++|++|+.+++++.+.+... +|+.+++.+|.||+|+
T Consensus 329 ~~v~i~~~~~v~~v~~~~~~~~v~~~~~~~g~~~~~~~D~Vv~At 373 (463)
T 3s5w_A 329 PRHAFRCMTTVERATATAQGIELALRDAGSGELSVETYDAVILAT 373 (463)
T ss_dssp CCSEEETTEEEEEEEEETTEEEEEEEETTTCCEEEEEESEEEECC
T ss_pred CCeEEEeCCEEEEEEecCCEEEEEEEEcCCCCeEEEECCEEEEee
Confidence 5789999999999998888776666543 6755679999999983
No 439
>2q0l_A TRXR, thioredoxin reductase; bacterial thiredoxin reductase, NADP+ B reduced izoalloxazine bending, oxidoreductase; HET: FAD NAP; 1.45A {Helicobacter pylori} PDB: 2q0k_A* 3ish_A*
Probab=95.61 E-value=0.049 Score=66.18 Aligned_cols=36 Identities=25% Similarity=0.473 Sum_probs=32.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||+|.+|+-.|..|++.|. +|+++++++++
T Consensus 143 ~~~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 178 (311)
T 2q0l_A 143 NKEVAVLGGGDTAVEEAIYLANICK-KVYLIHRRDGF 178 (311)
T ss_dssp TSEEEEECCSHHHHHHHHHHHTTSS-EEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEeeCCcc
Confidence 4789999999999999999999998 69999986543
No 440
>3hyw_A Sulfide-quinone reductase; monotopic membrane protein, flavoprotein, polysulfur, oxidoreductase; HET: FAD DCQ LMT; 2.00A {Aquifex aeolicus} PDB: 3hyv_A* 3hyx_A*
Probab=95.58 E-value=0.0059 Score=78.24 Aligned_cols=34 Identities=32% Similarity=0.606 Sum_probs=30.9
Q ss_pred CeEEEECccHHHHHHHHHHHhCC--CCceEEEecCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLG--YRNVTLLEKYHT 56 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G--~~~VtVlEk~~r 56 (2280)
++|+|||||.+|++||.+|++.+ + +|||+|++++
T Consensus 3 K~VvIIGgG~aGl~aA~~L~~~~~~~-~VtlI~~~~~ 38 (430)
T 3hyw_A 3 KHVVVIGGGVGGIATAYNLRNLMPDL-KITLISDRPY 38 (430)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHCTTC-EEEEECSSSE
T ss_pred CcEEEECCCHHHHHHHHHHhccCcCC-eEEEEcCCCC
Confidence 58999999999999999999876 5 6999999875
No 441
>1kdg_A CDH, cellobiose dehydrogenase; GMC oxidoreductase, PHBH fold, alpha/beta structure, rossman 6-hydroxylated FAD, oxidoreductase; HET: NAG MAN 6FA EMT; 1.50A {Phanerochaete chrysosporium} SCOP: c.3.1.2 d.16.1.1 PDB: 1naa_A*
Probab=95.49 E-value=0.0079 Score=79.66 Aligned_cols=36 Identities=36% Similarity=0.459 Sum_probs=33.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|++|||||++|+++|.+|+++|. +|+|||+...
T Consensus 6 ~~~D~iIvG~G~aG~~~A~~L~~~g~-~VlvlE~g~~ 41 (546)
T 1kdg_A 6 TPYDYIIVGAGPGGIIAADRLSEAGK-KVLLLERGGP 41 (546)
T ss_dssp CCEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCC
T ss_pred CceeEEEECcCHHHHHHHHHHHhCCC-eEEEEeCCCC
Confidence 45799999999999999999999998 6999999864
No 442
>1dxl_A Dihydrolipoamide dehydrogenase; oxidoreductase, multienzyme complex protein, pyruvate dehydrogenase complex, glycine decarboxylase complex; HET: FAD; 3.15A {Pisum sativum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.46 E-value=0.023 Score=73.72 Aligned_cols=36 Identities=22% Similarity=0.433 Sum_probs=32.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+|+|+++++
T Consensus 177 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtli~~~~~~ 212 (470)
T 1dxl_A 177 PKKLVVIGAGYIGLEMGSVWGRIGS-EVTVVEFASEI 212 (470)
T ss_dssp CSEEEESCCSHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-cEEEEEcCCcc
Confidence 4789999999999999999999998 69999997765
No 443
>2hqm_A GR, grase, glutathione reductase; glutathione reductase complexed with FAD, oxidoreductase; HET: NAG FAD GSH; 2.40A {Saccharomyces cerevisiae}
Probab=95.35 E-value=0.041 Score=71.50 Aligned_cols=36 Identities=28% Similarity=0.384 Sum_probs=32.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||..|+-.|..|++.|. +|+++|+.+++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 220 (479)
T 2hqm_A 185 PKKVVVVGAGYIGIELAGVFHGLGS-ETHLVIRGETV 220 (479)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEEeCCcc
Confidence 4689999999999999999999998 69999997664
No 444
>1fec_A Trypanothione reductase; redox-active center, oxidoreductase, flavoprotein, FAD, NADP; HET: FAD; 1.70A {Crithidia fasciculata} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1fea_A* 1feb_A* 2tpr_A* 1tyt_A* 1typ_A* 2jk6_A* 2w0h_A* 2yau_A* 2x50_A* 2ve2_A*
Probab=95.33 E-value=0.044 Score=71.31 Aligned_cols=36 Identities=25% Similarity=0.228 Sum_probs=32.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhC---CCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL---GYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~---G~~~VtVlEk~~ri 57 (2280)
.++|+|||||..|+-.|..|++. |. +|+++|+.+++
T Consensus 187 ~~~vvViGgG~ig~E~A~~l~~~~~~g~-~Vtlv~~~~~~ 225 (490)
T 1fec_A 187 PKRALCVGGGYISIEFAGIFNAYKARGG-QVDLAYRGDMI 225 (490)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHSCTTC-EEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhccCcC-eEEEEEcCCCc
Confidence 46899999999999999999999 98 69999997764
No 445
>1xdi_A RV3303C-LPDA; reductase, FAD, NAD, NADP, unkno function; HET: FAD; 2.81A {Mycobacterium tuberculosis} SCOP: c.3.1.5 d.87.1.1
Probab=95.28 E-value=0.048 Score=71.25 Aligned_cols=36 Identities=28% Similarity=0.397 Sum_probs=32.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||..|+-.|..|++.|. +|+++|+.+++
T Consensus 182 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 217 (499)
T 1xdi_A 182 PDHLIVVGSGVTGAEFVDAYTELGV-PVTVVASQDHV 217 (499)
T ss_dssp CSSEEEESCSHHHHHHHHHHHHTTC-CEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-eEEEEEcCCcc
Confidence 4689999999999999999999998 69999997764
No 446
>2a8x_A Dihydrolipoyl dehydrogenase, E3 component of alpha; lipoamide dehydrogenase, pyruvate dehydrogenase, alpha keto acid dehydrogenase; HET: FAD; 2.40A {Mycobacterium tuberculosis} PDB: 3ii4_A*
Probab=95.27 E-value=0.049 Score=70.49 Aligned_cols=36 Identities=31% Similarity=0.485 Sum_probs=32.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+|+|+.+++
T Consensus 171 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 206 (464)
T 2a8x_A 171 PKSIIIAGAGAIGMEFGYVLKNYGV-DVTIVEFLPRA 206 (464)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCC-eEEEEEcCCcc
Confidence 4789999999999999999999998 69999997664
No 447
>1q1r_A Putidaredoxin reductase; glutathione reductase fold, oxidoreductase; HET: FAD; 1.91A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1q1w_A* 3lb8_A*
Probab=95.25 E-value=0.037 Score=70.79 Aligned_cols=37 Identities=35% Similarity=0.523 Sum_probs=32.8
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..++|+|||||.+|+-+|..|++.|. +|+++|+.+++
T Consensus 148 ~~~~vvViGgG~~g~E~A~~l~~~G~-~Vtlv~~~~~~ 184 (431)
T 1q1r_A 148 ADNRLVVIGGGYIGLEVAATAIKANM-HVTLLDTAARV 184 (431)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSST
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCC-EEEEEEeCCcc
Confidence 35789999999999999999999998 69999986553
No 448
>1lvl_A Dihydrolipoamide dehydrogenase; oxidoreductase; HET: FAD NAD; 2.45A {Pseudomonas putida} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.23 E-value=0.02 Score=73.91 Aligned_cols=36 Identities=33% Similarity=0.530 Sum_probs=32.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+.+|..|++.|. +|+|+|+++++
T Consensus 171 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 206 (458)
T 1lvl_A 171 PQHLVVVGGGYIGLELGIAYRKLGA-QVSVVEARERI 206 (458)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred CCeEEEECcCHHHHHHHHHHHHCCC-eEEEEEcCCcc
Confidence 4689999999999999999999998 69999997765
No 449
>1onf_A GR, grase, glutathione reductase; oxidoreductase; HET: FAD; 2.60A {Plasmodium falciparum} SCOP: c.3.1.5 c.3.1.5 d.87.1.1
Probab=95.23 E-value=0.058 Score=70.44 Aligned_cols=36 Identities=22% Similarity=0.477 Sum_probs=32.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.+++
T Consensus 176 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 211 (500)
T 1onf_A 176 SKKIGIVGSGYIAVELINVIKRLGI-DSYIFARGNRI 211 (500)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC-EEEEECSSSSS
T ss_pred CCeEEEECChHHHHHHHHHHHHcCC-eEEEEecCCcc
Confidence 4689999999999999999999998 69999997764
No 450
>3itj_A Thioredoxin reductase 1; disulfide B flavoprotein, NADP, oxidoreductase, phosphoprotein, redox-A center; HET: FAD CIT; 2.40A {Saccharomyces cerevisiae} PDB: 3d8x_A*
Probab=95.21 E-value=0.067 Score=65.73 Aligned_cols=36 Identities=31% Similarity=0.458 Sum_probs=32.0
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
..++|+|||+|.+|+-+|..|++.|. +|+++++.++
T Consensus 172 ~~~~v~vvG~G~~g~e~a~~l~~~g~-~v~~v~~~~~ 207 (338)
T 3itj_A 172 RNKPLAVIGGGDSACEEAQFLTKYGS-KVFMLVRKDH 207 (338)
T ss_dssp TTSEEEEECSSHHHHHHHHHHTTTSS-EEEEECSSSS
T ss_pred CCCEEEEECCCHHHHHHHHHHHhcCC-EEEEEEcCCc
Confidence 35789999999999999999999998 6999998654
No 451
>2gqw_A Ferredoxin reductase; flavoprotein, oxidoreductase; HET: FAD; 1.40A {Pseudomonas SP} PDB: 1f3p_A* 1d7y_A* 2gr0_A* 2gr1_A* 2gr2_A* 2yvf_A* 2yvg_A* 2yvj_A* 2gr3_A*
Probab=95.16 E-value=0.055 Score=68.69 Aligned_cols=37 Identities=35% Similarity=0.491 Sum_probs=33.3
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..++|+|||||.+|+-+|..|++.|. +|+++|+++++
T Consensus 144 ~~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 180 (408)
T 2gqw_A 144 PQSRLLIVGGGVIGLELAATARTAGV-HVSLVETQPRL 180 (408)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred cCCeEEEECCCHHHHHHHHHHHhCCC-EEEEEEeCCcc
Confidence 35799999999999999999999998 69999997654
No 452
>3iwa_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; structural genomics, PSI-2, protein structur initiative; 2.30A {Desulfovibrio vulgaris}
Probab=95.14 E-value=0.053 Score=70.31 Aligned_cols=36 Identities=36% Similarity=0.545 Sum_probs=32.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++. |. +|+++|+.+++
T Consensus 159 ~~~vvViGgG~~g~e~A~~l~~~~g~-~Vtlv~~~~~~ 195 (472)
T 3iwa_A 159 VSKAVIVGGGFIGLEMAVSLADMWGI-DTTVVELADQI 195 (472)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHHHCC-EEEEECSSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhcCC-cEEEEEccCcc
Confidence 46899999999999999999999 98 69999987543
No 453
>3o0h_A Glutathione reductase; ssgcid, structur genomics, seattle structural genomics center for infectious gluathione reductase, oxidoreductase; HET: FAD; 1.90A {Bartonella henselae}
Probab=95.08 E-value=0.053 Score=70.57 Aligned_cols=36 Identities=36% Similarity=0.471 Sum_probs=32.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.+++
T Consensus 191 ~~~v~ViGgG~~g~e~A~~l~~~g~-~Vtli~~~~~~ 226 (484)
T 3o0h_A 191 PKSIVIVGGGYIGVEFANIFHGLGV-KTTLLHRGDLI 226 (484)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCcEEEECcCHHHHHHHHHHHHcCC-eEEEEECCCcc
Confidence 4689999999999999999999998 69999987654
No 454
>3q9t_A Choline dehydrogenase and related flavoproteins; glucose-methanol-choline oxidoreductase family, formate OXID formyl-FAD, oxidoreductase; HET: FAY; 2.24A {Aspergillus oryzae}
Probab=95.05 E-value=0.012 Score=77.52 Aligned_cols=37 Identities=30% Similarity=0.267 Sum_probs=32.5
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
..+|+||||||.||+++|.+|++.|..+|+||||...
T Consensus 5 ~~yDyIVVGgG~AG~v~A~rLse~~~~~VLllEaG~~ 41 (577)
T 3q9t_A 5 SHFDFVIVGGGTAGNTVAGRLAENPNVTVLIVEAGIG 41 (577)
T ss_dssp CEEEEEEESCSHHHHHHHHHHTTSTTSCEEEECSSCS
T ss_pred CcccEEEECCcHHHHHHHHHHHhCCCCcEEEEecCCC
Confidence 3589999999999999999999998326999999765
No 455
>1trb_A Thioredoxin reductase; oxidoreductase(flavoenzyme); HET: FAD; 2.00A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5 PDB: 1cl0_A* 1f6m_A* 1tdf_A* 1tde_A*
Probab=95.04 E-value=0.089 Score=64.14 Aligned_cols=35 Identities=23% Similarity=0.553 Sum_probs=31.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 145 ~~~v~ViG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 179 (320)
T 1trb_A 145 NQKVAVIGGGNTAVEEALYLSNIAS-EVHLIHRRDG 179 (320)
T ss_dssp TSEEEEECSSHHHHHHHHHHTTTSS-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhcCC-eEEEEEeCCc
Confidence 4689999999999999999999998 6999998654
No 456
>2wpf_A Trypanothione reductase; oxidoreductase, trypanosomiasis, sleeping sickness, flavoPro redox-active center; HET: FAD WPF; 1.90A {Trypanosoma brucei} PDB: 2wov_A* 2wow_A* 2wp5_A* 2wp6_A* 2wpc_A* 2wpe_A* 2woi_A* 2wba_A* 1nda_A* 1gxf_A* 1bzl_A* 1aog_A*
Probab=95.01 E-value=0.063 Score=69.93 Aligned_cols=36 Identities=28% Similarity=0.296 Sum_probs=32.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhC---CCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKL---GYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~---G~~~VtVlEk~~ri 57 (2280)
.++|+|||||..|+-.|..|++. |. +|+|+|+.+++
T Consensus 191 ~~~vvViGgG~ig~E~A~~l~~~~~~g~-~Vtlv~~~~~~ 229 (495)
T 2wpf_A 191 PRRVLTVGGGFISVEFAGIFNAYKPPGG-KVTLCYRNNLI 229 (495)
T ss_dssp CSEEEEECSSHHHHHHHHHHHHHCCTTC-EEEEEESSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCCCCC-eEEEEEcCCcc
Confidence 46899999999999999999999 98 69999987654
No 457
>3r9u_A Thioredoxin reductase; structural genomics, center for structural genomics of infec diseases, csgid, thioredoxin-disulfide reductase, FAD; HET: FAD; 2.36A {Campylobacter jejuni}
Probab=95.00 E-value=0.079 Score=64.35 Aligned_cols=36 Identities=25% Similarity=0.508 Sum_probs=32.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||+|.+|+-+|..|++.|. +|+++++++++
T Consensus 147 ~~~v~viG~g~~~~e~a~~l~~~g~-~v~~~~~~~~~ 182 (315)
T 3r9u_A 147 NKEVAVLGGGDTALEEALYLANICS-KIYLIHRRDEF 182 (315)
T ss_dssp TSEEEEECCBHHHHHHHHHHHTTSS-EEEEECSSSSC
T ss_pred cCEEEEECCCHHHHHHHHHHHhhCC-EEEEEEeCCCC
Confidence 4789999999999999999999997 69999986543
No 458
>1ju2_A HydroxynitrIle lyase; flavin, GMC oxidoreductase, almond, cyanogenesis; HET: NAG NDG FUC BMA MAN FAD; 1.47A {Prunus dulcis} SCOP: c.3.1.2 d.16.1.1 PDB: 3gdp_A* 3gdn_A*
Probab=95.00 E-value=0.0074 Score=79.41 Aligned_cols=37 Identities=35% Similarity=0.411 Sum_probs=33.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.++|++|||||.+|+.+|.+|++ |. +|+|||+....+
T Consensus 25 ~~yD~IIVGsG~AG~v~A~rLse-g~-~VlvLEaG~~~~ 61 (536)
T 1ju2_A 25 GSYDYVIVGGGTSGCPLAATLSE-KY-KVLVLERGSLPT 61 (536)
T ss_dssp EEEEEEEECCSTTHHHHHHHHTT-TS-CEEEECSSBCGG
T ss_pred CcccEEEECccHHHHHHHHHHhc-CC-cEEEEecCCCcC
Confidence 45799999999999999999999 98 699999987654
No 459
>1n4w_A CHOD, cholesterol oxidase; flavoenzyme, steroid metabolism, oxidoreductase, atomic RESO; HET: FAD; 0.92A {Streptomyces SP} SCOP: c.3.1.2 d.16.1.1 PDB: 1b4v_A* 1n1p_A* 1n4u_A* 1n4v_A* 1mxt_A* 2gew_A* 1b8s_A* 3gyi_A* 1cc2_A* 3gyj_A* 1ijh_A* 1cbo_A* 3b3r_A* 3b6d_A* 3cnj_A*
Probab=94.95 E-value=0.014 Score=76.17 Aligned_cols=38 Identities=18% Similarity=0.174 Sum_probs=34.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.++|++|||||++|+++|++|++.|. +|+|+|+..+.+
T Consensus 4 ~~~d~~iiG~G~~g~~~a~~l~~~~~-~v~~~e~~~~~~ 41 (504)
T 1n4w_A 4 GYVPAVVIGTGYGAAVSALRLGEAGV-QTLMLEMGQLWN 41 (504)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHTTC-CEEEEESSCCCC
T ss_pred CcCCEEEECCCHHHHHHHHHHHhCCC-cEEEEeCCCCCC
Confidence 35799999999999999999999998 699999988665
No 460
>3cgb_A Pyridine nucleotide-disulfide oxidoreductase, CLA; coenzyme A, flavin adenine dinucleotide, selenomethionine, F flavoprotein; HET: COA FAD; 1.90A {Bacillus anthracis str} PDB: 3cgc_A* 3cgd_A* 3cge_A*
Probab=94.95 E-value=0.059 Score=70.02 Aligned_cols=37 Identities=30% Similarity=0.569 Sum_probs=32.9
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..++|+|||||.+|+.+|..|++.|. +|+|+|+++++
T Consensus 185 ~~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 221 (480)
T 3cgb_A 185 KVEDVTIIGGGAIGLEMAETFVELGK-KVRMIERNDHI 221 (480)
T ss_dssp CCCEEEEECCHHHHHHHHHHHHHTTC-EEEEECCGGGT
T ss_pred CCCeEEEECCCHHHHHHHHHHHhcCC-eEEEEEeCCch
Confidence 35789999999999999999999998 69999986654
No 461
>3oc4_A Oxidoreductase, pyridine nucleotide-disulfide FAM; structural genomics, PSI-2, protein structure initiative; HET: FAD; 2.60A {Enterococcus faecalis}
Probab=94.94 E-value=0.072 Score=68.59 Aligned_cols=36 Identities=22% Similarity=0.510 Sum_probs=32.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+++|+.+++
T Consensus 147 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 182 (452)
T 3oc4_A 147 SQTVAVIGAGPIGMEAIDFLVKMKK-TVHVFESLENL 182 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEEccCcc
Confidence 4689999999999999999999998 69999997654
No 462
>3t37_A Probable dehydrogenase; BET alpha beta fold, ADP binding, oxidoreductase; HET: FAD; 2.19A {Mesorhizobium loti}
Probab=94.88 E-value=0.013 Score=77.42 Aligned_cols=36 Identities=36% Similarity=0.392 Sum_probs=31.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-CCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAK-LGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~-~G~~~VtVlEk~~r 56 (2280)
.++|+||||||.+|+..|.+|++ .|+ +|+|||+...
T Consensus 16 ~~yD~IIVGsG~aG~v~A~rLse~~~~-~VLvLEaG~~ 52 (526)
T 3t37_A 16 PNCDIVIVGGGSAGSLLAARLSEDPDS-RVLLIEAGEE 52 (526)
T ss_dssp -CEEEEEECCSHHHHHHHHHHTTSTTS-CEEEECSSBC
T ss_pred CCeeEEEECccHHHHHHHHHHHhCCCC-eEEEEcCCCC
Confidence 36899999999999999999998 577 6999999643
No 463
>1fl2_A Alkyl hydroperoxide reductase subunit F; reactive oxygen, FAD, disulphi oxidoreductase, oxidoreductase; HET: FAD; 1.90A {Escherichia coli} SCOP: c.3.1.5 c.3.1.5
Probab=94.84 E-value=0.09 Score=63.77 Aligned_cols=35 Identities=40% Similarity=0.580 Sum_probs=31.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||+|.+|+-+|..|++.|. +|+++|+.++
T Consensus 144 ~~~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 178 (310)
T 1fl2_A 144 GKRVAVIGGGNSGVEAAIDLAGIVE-HVTLLEFAPE 178 (310)
T ss_dssp TCEEEEECCSHHHHHHHHHHHTTBS-EEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHHhCC-EEEEEEeCcc
Confidence 4689999999999999999999997 6999998654
No 464
>1mo9_A ORF3; nucleotide binding motifs, nucleotide binding domain, oxidor; HET: FAD KPC; 1.65A {Xanthobacter autotrophicus} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1mok_A* 2c3c_A* 2c3d_A* 3q6j_A*
Probab=94.83 E-value=0.067 Score=70.23 Aligned_cols=35 Identities=14% Similarity=0.320 Sum_probs=32.4
Q ss_pred CeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 22 TRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 22 ~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
++|+|||||.+|+-.|..|++.|. +|+++|+.+++
T Consensus 215 ~~vvViGgG~~g~E~A~~l~~~G~-~Vtlv~~~~~~ 249 (523)
T 1mo9_A 215 STVVVVGGSKTAVEYGCFFNATGR-RTVMLVRTEPL 249 (523)
T ss_dssp SEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTT
T ss_pred CeEEEECCCHHHHHHHHHHHHcCC-eEEEEEecCcc
Confidence 789999999999999999999998 69999997664
No 465
>2cdu_A NADPH oxidase; flavoenzyme, oxidoreductase; HET: FAD ADP; 1.8A {Lactobacillus sanfranciscensis}
Probab=94.75 E-value=0.12 Score=66.43 Aligned_cols=36 Identities=33% Similarity=0.470 Sum_probs=32.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.+++
T Consensus 149 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 184 (452)
T 2cdu_A 149 AKTITIIGSGYIGAELAEAYSNQNY-NVNLIDGHERV 184 (452)
T ss_dssp CSEEEEECCSHHHHHHHHHHHTTTC-EEEEEESSSST
T ss_pred CCeEEEECcCHHHHHHHHHHHhcCC-EEEEEEcCCch
Confidence 4689999999999999999999998 69999987654
No 466
>3l8k_A Dihydrolipoyl dehydrogenase; redox-active center, structural genomics, PSI-2, protein structure initiative; HET: ADP; 2.50A {Sulfolobus solfataricus}
Probab=94.61 E-value=0.092 Score=67.89 Aligned_cols=36 Identities=22% Similarity=0.371 Sum_probs=32.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.+++
T Consensus 172 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 207 (466)
T 3l8k_A 172 PQDMVIIGAGYIGLEIASIFRLMGV-QTHIIEMLDRA 207 (466)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-EEEEEEeCCcC
Confidence 4689999999999999999999998 69999997654
No 467
>2bc0_A NADH oxidase; flavoprotein, pyridine nucleotide disulfide oxidoreductase, C(4A)-peroxyflavin, crystallography, conformational dynamics; HET: FAD; 2.00A {Streptococcus pyogenes} PDB: 2bcp_A* 2bc1_A*
Probab=94.58 E-value=0.079 Score=68.97 Aligned_cols=37 Identities=30% Similarity=0.435 Sum_probs=33.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..++|+|||||.+|+-.|..|++.|. +|+|+|+++++
T Consensus 193 ~~~~vvVIGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 229 (490)
T 2bc0_A 193 DIKRVAVVGAGYIGVELAEAFQRKGK-EVVLIDVVDTC 229 (490)
T ss_dssp TCCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSST
T ss_pred CCceEEEECCCHHHHHHHHHHHHCCC-eEEEEEcccch
Confidence 35789999999999999999999998 69999997664
No 468
>3dk9_A Grase, GR, glutathione reductase; flavoenzyme, nicotinamide, acetylation, alternative initiation, cytoplasm, FAD, flavoprotein, mitochondrion, NADP; HET: SO4 FAD; 0.95A {Homo sapiens} PDB: 1bwc_A* 1gra_A* 1gre_A* 1grf_A* 1grh_A* 1grb_A* 2gh5_A* 1gsn_A* 3dk4_A* 3dk8_A* 3djj_A* 3grs_A* 3sqp_A* 4gr1_A* 2aaq_A* 1dnc_A* 1grg_A* 1grt_A* 1xan_A* 5grt_A* ...
Probab=94.56 E-value=0.12 Score=67.21 Aligned_cols=36 Identities=31% Similarity=0.349 Sum_probs=32.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.+++
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 222 (478)
T 3dk9_A 187 PGRSVIVGAGYIAVEMAGILSALGS-KTSLMIRHDKV 222 (478)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CccEEEECCCHHHHHHHHHHHHcCC-eEEEEEeCCcc
Confidence 4689999999999999999999998 69999987654
No 469
>3ab1_A Ferredoxin--NADP reductase; oxidoreductase, electron transport, FAD, flavoprotein; HET: FAD; 2.39A {Chlorobaculum tepidum}
Probab=94.53 E-value=0.077 Score=66.01 Aligned_cols=35 Identities=40% Similarity=0.520 Sum_probs=31.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 163 ~~~vvVvG~G~~g~e~A~~l~~~g~-~V~lv~~~~~ 197 (360)
T 3ab1_A 163 GKRVVIVGGGDSALDWTVGLIKNAA-SVTLVHRGHE 197 (360)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSS-EEEEECSSSS
T ss_pred CCcEEEECCCHHHHHHHHHHHhcCC-EEEEEEcCCC
Confidence 4689999999999999999999997 6999998654
No 470
>2q7v_A Thioredoxin reductase; rossman fold, FAD, flavoprotein, oxidoreductase, redox- active center; HET: FAD; 1.90A {Deinococcus radiodurans}
Probab=94.49 E-value=0.13 Score=62.77 Aligned_cols=35 Identities=23% Similarity=0.505 Sum_probs=31.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 152 ~~~v~VvG~G~~g~e~A~~l~~~g~-~Vtlv~~~~~ 186 (325)
T 2q7v_A 152 GKKVVVIGGGDAAVEEGMFLTKFAD-EVTVIHRRDT 186 (325)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCS-EEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEeCCCc
Confidence 4789999999999999999999998 6999998654
No 471
>1coy_A Cholesterol oxidase; oxidoreductase(oxygen receptor); HET: AND FAD; 1.80A {Brevibacterium sterolicum} SCOP: c.3.1.2 d.16.1.1 PDB: 3cox_A*
Probab=94.45 E-value=0.023 Score=74.27 Aligned_cols=38 Identities=18% Similarity=0.228 Sum_probs=33.9
Q ss_pred CCCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 19 PVNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 19 ~~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..++|++|||||.+|+++|++|++.|. +|+|+|+....
T Consensus 9 ~~~~d~~iiG~G~~g~~~a~~l~~~~~-~v~~~e~~~~~ 46 (507)
T 1coy_A 9 GDRVPALVIGSGYGGAVAALRLTQAGI-PTQIVEMGRSW 46 (507)
T ss_dssp TCEEEEEEECCSHHHHHHHHHHHHTTC-CEEEECSSCCS
T ss_pred CCcCCEEEECCCHHHHHHHHHHHHCCC-cEEEEECCCCC
Confidence 446899999999999999999999998 69999997653
No 472
>1vdc_A NTR, NADPH dependent thioredoxin reductase; hypothetical protein, redox-active center, oxidoreductase, D oxidoreductase; HET: FAD; 2.50A {Arabidopsis thaliana} SCOP: c.3.1.5 c.3.1.5 PDB: 2whd_A*
Probab=94.40 E-value=0.15 Score=62.45 Aligned_cols=36 Identities=28% Similarity=0.525 Sum_probs=32.2
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
..++|+|||+|.+|+-.|..|++.|. +|+++|++++
T Consensus 158 ~~~~v~VvG~G~~g~e~A~~l~~~g~-~V~lv~~~~~ 193 (333)
T 1vdc_A 158 RNKPLAVIGGGDSAMEEANFLTKYGS-KVYIIHRRDA 193 (333)
T ss_dssp TTSEEEEECCSHHHHHHHHHHTTTSS-EEEEECSSSS
T ss_pred CCCeEEEECCChHHHHHHHHHHhcCC-eEEEEecCCc
Confidence 35789999999999999999999998 6999998654
No 473
>4dna_A Probable glutathione reductase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; HET: FAD; 2.80A {Sinorhizobium meliloti}
Probab=94.37 E-value=0.12 Score=66.61 Aligned_cols=35 Identities=29% Similarity=0.326 Sum_probs=32.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.++
T Consensus 170 ~~~v~ViGgG~~g~e~A~~l~~~g~-~Vt~v~~~~~ 204 (463)
T 4dna_A 170 PESILIAGGGYIAVEFANIFHGLGV-KTTLIYRGKE 204 (463)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-eEEEEEcCCc
Confidence 5689999999999999999999998 6999998764
No 474
>3ntd_A FAD-dependent pyridine nucleotide-disulphide oxidoreductase; COA, persulfide reductase, rhodanese; HET: COA FAD; 1.99A {Shewanella loihica} PDB: 3nta_A* 3nt6_A*
Probab=94.27 E-value=0.14 Score=68.04 Aligned_cols=36 Identities=39% Similarity=0.493 Sum_probs=32.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+++|+.+++
T Consensus 151 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 186 (565)
T 3ntd_A 151 VEHATVVGGGFIGLEMMESLHHLGI-KTTLLELADQV 186 (565)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEEESSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-cEEEEEcCCcc
Confidence 3689999999999999999999998 69999997654
No 475
>1ojt_A Surface protein; redox-active center, glycolysis, oxidoreductase, NAD, flavop FAD, P64K; HET: FAD; 2.75A {Neisseria meningitidis} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 1bhy_A*
Probab=94.16 E-value=0.057 Score=70.17 Aligned_cols=36 Identities=25% Similarity=0.457 Sum_probs=32.8
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||..|+-.|..|++.|. +|+|+|+++++
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~G~-~Vtlv~~~~~~ 220 (482)
T 1ojt_A 185 PGKLLIIGGGIIGLEMGTVYSTLGS-RLDVVEMMDGL 220 (482)
T ss_dssp CSEEEEESCSHHHHHHHHHHHHHTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-eEEEEEECCcc
Confidence 4789999999999999999999998 69999987664
No 476
>4b1b_A TRXR, thioredoxin reductase; oxidoreductase, FAD, NADPH, thiol-mediated redox metabolism, pyridine nucleotide-disulfide oxidoreductase; HET: FAD; 2.90A {Plasmodium falciparum}
Probab=94.09 E-value=0.19 Score=65.76 Aligned_cols=34 Identities=26% Similarity=0.317 Sum_probs=30.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
.++++|||||..|+-.|..+++.|. +|||++++.
T Consensus 223 P~~lvIIGgG~IGlE~A~~~~~lG~-~VTii~~~~ 256 (542)
T 4b1b_A 223 PGKTLVVGASYVALECSGFLNSLGY-DVTVAVRSI 256 (542)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHHTC-CEEEEESSC
T ss_pred CceEEEECCCHHHHHHHHHHHhcCC-eEEEecccc
Confidence 3689999999999999999999998 699998743
No 477
>1zk7_A HGII, reductase, mercuric reductase; mercuric ION reductase, oxidoreductase; HET: FAD; 1.60A {Pseudomonas aeruginosa} PDB: 1zx9_A*
Probab=93.86 E-value=0.2 Score=64.80 Aligned_cols=36 Identities=31% Similarity=0.486 Sum_probs=32.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+++|+++++
T Consensus 176 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~~~~ 211 (467)
T 1zk7_A 176 PERLAVIGSSVVALELAQAFARLGS-KVTVLARNTLF 211 (467)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSCTT
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEEECCcc
Confidence 4689999999999999999999998 69999987654
No 478
>3qvp_A Glucose oxidase; oxidoreductase; HET: NAG BMA MAN FAD; 1.20A {Aspergillus niger} PDB: 1gal_A* 1cf3_A* 3qvr_A*
Probab=93.80 E-value=0.032 Score=73.56 Aligned_cols=35 Identities=31% Similarity=0.381 Sum_probs=31.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYH 55 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~ 55 (2280)
..+|+||||||.||+++|.+|++. |. +|+|||+..
T Consensus 18 ~~yDyIIVGgG~AG~vlA~RLse~~~~-~VLlLEaG~ 53 (583)
T 3qvp_A 18 RTVDYIIAGGGLTGLTTAARLTENPNI-SVLVIESGS 53 (583)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTC-CEEEECSSC
T ss_pred CCccEEEECCcHHHHHHHHHHHhCCCC-cEEEEecCC
Confidence 358999999999999999999975 66 699999976
No 479
>2hfk_A Pikromycin, type I polyketide synthase pikaiv; alpha/beta hydrolase, thioesterase; HET: E4H; 1.79A {Streptomyces venezuelae} PDB: 2h7x_A* 2h7y_A* 2hfj_A* 1mna_A 1mn6_A 1mnq_A
Probab=93.72 E-value=0.004 Score=76.36 Aligned_cols=52 Identities=6% Similarity=0.013 Sum_probs=38.9
Q ss_pred CCChhHHHHHHHHHHHHHhCCCCccccCCCChhhcccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHHHH
Q 037878 1076 KMSNKDIVEFLKGLVSEQTGIPITKVSATDSLVSYGIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLASF 1149 (2280)
Q Consensus 1076 ~~~~~~~e~~l~~iw~~vLg~~~~~i~~~~~Ff~lGGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA~~ 1149 (2280)
..|.+++|+.|+++|+++||++ + +||||+| +++++++++. |++||+++||..
T Consensus 23 ~~P~~~~E~~la~iw~~vL~~~--~---~d~Ff~l-------~~l~~~~~~~----------f~~pt~~~la~~ 74 (319)
T 2hfk_A 23 GADTGAGAGMFRALFRQAVEDD--R---YGEFLDV-------LAEASAFRPQ----------FASPEACSERLD 74 (319)
T ss_dssp -------CCHHHHHHHHHHHTT--C---HHHHHHH-------HHHHHTTSCE----------ECSGGGCCSCCC
T ss_pred CCCCCchHHHHHHHHHHHHcCC--c---hHHHHHH-------HHHHHHHHHh----------cCCcchhhcccc
Confidence 3467889999999999999996 3 9999999 7888888654 899999988853
No 480
>2px6_A Thioesterase domain; thioesaterse domain, orlistat, fatty acid synthase, drug complex, tetrahydrolipstatin, transferase; HET: DH9; 2.30A {Homo sapiens}
Probab=93.69 E-value=0.006 Score=74.69 Aligned_cols=37 Identities=5% Similarity=-0.020 Sum_probs=10.8
Q ss_pred ccchHHHHHHHHHHHHHhCCccCcccccCcccHHHHH
Q 037878 1111 GIDSIGVVRAAQKLSDFLGVPVGAVDIFTATCIADLA 1147 (2280)
Q Consensus 1111 GGdSL~a~~l~~~l~~~~g~~l~~~di~~~pti~~LA 1147 (2280)
|||||+|+||+++|++.+|+++++.++|++||++.|+
T Consensus 1 GGdSL~a~~l~~rl~~~~g~~l~~~~lf~~pt~~~l~ 37 (316)
T 2px6_A 1 GSHNLACPTPKEDGLAQQQTQLNLRSLLVNPEGPTLM 37 (316)
T ss_dssp -------------------------CCCCCTTSCSEE
T ss_pred CCchHHHHHHHHHHHHHHhhccchhhhhcCCCcCeeE
Confidence 8999999999999999999999999999999988775
No 481
>1gpe_A Protein (glucose oxidase); oxidoreductase(flavoprotein); HET: NAG BMA MAN FAD; 1.80A {Penicillium amagasakiense} SCOP: c.3.1.2 d.16.1.1
Probab=93.69 E-value=0.037 Score=73.51 Aligned_cols=37 Identities=30% Similarity=0.312 Sum_probs=33.1
Q ss_pred CCCeEEEECccHHHHHHHHHHHh-CCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAK-LGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~-~G~~~VtVlEk~~ri 57 (2280)
.++|++|||||.+|+++|.+|++ .|. +|+|+|+....
T Consensus 23 ~~~d~iivG~G~~g~~~a~~l~~~~~~-~v~~~e~g~~~ 60 (587)
T 1gpe_A 23 KTYDYIIAGGGLTGLTVAAKLTENPKI-KVLVIEKGFYE 60 (587)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHTSTTC-CEEEEESSCCC
T ss_pred ccCCEEEECcCHHHHHHHHHHHhCCCC-cEEEEecCCcc
Confidence 35799999999999999999999 798 69999997654
No 482
>2jbv_A Choline oxidase; alcohol oxidation, flavoenyzme oxidase, covalently linked FAD, C4A-adduct, flavoprotein, oxidoreductase; HET: FAO; 1.86A {Arthrobacter globiformis} PDB: 3nne_A* 3ljp_A*
Probab=93.63 E-value=0.036 Score=73.03 Aligned_cols=38 Identities=26% Similarity=0.280 Sum_probs=33.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhC-CCCceEEEecCCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKL-GYRNVTLLEKYHTVG 58 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~-G~~~VtVlEk~~riG 58 (2280)
.+.|++|||||.+|+++|++|++. |. +|+|+|+.....
T Consensus 12 ~~~d~~ivG~G~~G~~~a~~l~~~~~~-~v~~~e~g~~~~ 50 (546)
T 2jbv_A 12 REFDYIVVGGGSAGAAVAARLSEDPAV-SVALVEAGPDDR 50 (546)
T ss_dssp CEEEEEEECCSHHHHHHHHHHTTSTTS-CEEEECSSCCCT
T ss_pred CcCCEEEECcCHHHHHHHHHHHhCCCC-CEEEEecCCcCC
Confidence 357999999999999999999998 87 699999987653
No 483
>3dgh_A TRXR-1, thioredoxin reductase 1, mitochondrial; oxidoreductase, rossmann, flavoprotein, alternative initiati mitochondrion, NADP; HET: FAD; 1.75A {Drosophila melanogaster} PDB: 2nvk_X* 3dh9_A*
Probab=93.58 E-value=0.33 Score=62.91 Aligned_cols=33 Identities=33% Similarity=0.439 Sum_probs=30.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.
T Consensus 187 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~ 219 (483)
T 3dgh_A 187 PGKTLVVGAGYIGLECAGFLKGLGY-EPTVMVRS 219 (483)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESS
T ss_pred CCcEEEECCCHHHHHHHHHHHHcCC-EEEEEeCC
Confidence 4689999999999999999999998 69999873
No 484
>3fim_B ARYL-alcohol oxidase; AAO, lignin degradation, oxidoreductase, flavoprotein; HET: FAD; 2.55A {Pleurotus eryngii}
Probab=93.49 E-value=0.03 Score=73.68 Aligned_cols=36 Identities=25% Similarity=0.237 Sum_probs=32.3
Q ss_pred CCeEEEECccHHHHHHHHHHHh-CCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAK-LGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~-~G~~~VtVlEk~~ri 57 (2280)
.+|++|||||.+|+.+|.+|++ .|. +|+|||+....
T Consensus 2 ~yD~IIVG~G~aG~v~A~rLse~~~~-~VlllEaG~~~ 38 (566)
T 3fim_B 2 DFDYVVVGAGNAGNVVAARLTEDPDV-SVLVLEAGVSD 38 (566)
T ss_dssp CEEEEESCCSTTHHHHHHHHTTSTTC-CEEEECSSBCC
T ss_pred CcCEEEECCcHHHHHHHHHHHhCcCC-cEEEEecCCcc
Confidence 4799999999999999999998 687 69999997655
No 485
>3dgz_A Thioredoxin reductase 2; oxidoreductase, rossmann, flavoprotein, FAD, mitochondrion, redox-active center, selenium, selenocysteine, transit PEPT; HET: FAD NA7; 2.25A {Mus musculus} PDB: 1zkq_A* 1zdl_A*
Probab=93.49 E-value=0.34 Score=62.93 Aligned_cols=33 Identities=21% Similarity=0.273 Sum_probs=30.1
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|+.
T Consensus 185 ~~~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~ 217 (488)
T 3dgz_A 185 PGKTLVVGASYVALECAGFLTGIGL-DTTVMMRS 217 (488)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCeEEEECCCHHHHHHHHHHHHcCC-ceEEEEcC
Confidence 3579999999999999999999998 69999974
No 486
>1m6i_A Programmed cell death protein 8; apoptosis, AIF, oxidoreductase; HET: FAD; 1.80A {Homo sapiens} SCOP: c.3.1.5 c.3.1.5 d.87.1.1 PDB: 3gd3_A* 3gd4_A* 1gv4_A*
Probab=93.48 E-value=0.2 Score=65.15 Aligned_cols=43 Identities=21% Similarity=0.194 Sum_probs=34.4
Q ss_pred HhHCCCceEeCcceEEEEEcCCccEEEEEeCCCceEEEEeCEEEEcC
Q 037878 196 SKYLPTEVHCNSEVLAIRRDSTTVGVDVKHSNGECEVMEFDKIIISG 242 (2280)
Q Consensus 196 a~~lg~~I~l~t~V~~I~~~~~~v~V~v~t~~G~~~~i~aD~VI~A~ 242 (2280)
.++.|++++++++|++|+.++++ +.++..+| +++.||.||+|+
T Consensus 236 l~~~GV~v~~~~~V~~i~~~~~~--~~v~l~dG--~~i~aD~Vv~a~ 278 (493)
T 1m6i_A 236 VRREGVKVMPNAIVQSVGVSSGK--LLIKLKDG--RKVETDHIVAAV 278 (493)
T ss_dssp HHTTTCEEECSCCEEEEEEETTE--EEEEETTS--CEEEESEEEECC
T ss_pred HHhcCCEEEeCCEEEEEEecCCe--EEEEECCC--CEEECCEEEECC
Confidence 34568899999999999876664 36667788 579999999984
No 487
>3ics_A Coenzyme A-disulfide reductase; pyridine nucleotide-disulfide oxidoreductase class I, rhodan coenzyme A, flavin adenine dinucleotide; HET: FAD COA ADP; 1.94A {Bacillus anthracis} PDB: 3icr_A* 3ict_A*
Probab=93.28 E-value=0.19 Score=66.95 Aligned_cols=36 Identities=31% Similarity=0.451 Sum_probs=32.5
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||.+|+-+|..|++.|. +|+++|+.+++
T Consensus 187 ~~~vvViGgG~~g~e~A~~l~~~g~-~Vtlv~~~~~~ 222 (588)
T 3ics_A 187 PRHATVIGGGFIGVEMVENLRERGI-EVTLVEMANQV 222 (588)
T ss_dssp CSEEEEECCSHHHHHHHHHHHHTTC-EEEEECSSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEecCCcc
Confidence 4689999999999999999999998 69999987654
No 488
>3cty_A Thioredoxin reductase; FAD, oxidoreductase, flavin, flavoprotein; HET: FAD; 2.35A {Thermoplasma acidophilum}
Probab=92.86 E-value=0.36 Score=58.70 Aligned_cols=35 Identities=31% Similarity=0.486 Sum_probs=31.3
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||||.+|+-.|..|++.|. +|++++++++
T Consensus 155 ~~~v~viG~G~~g~e~a~~l~~~g~-~V~~i~~~~~ 189 (319)
T 3cty_A 155 GKRVVTIGGGNSGAIAAISMSEYVK-NVTIIEYMPK 189 (319)
T ss_dssp TSEEEEECCSHHHHHHHHHHTTTBS-EEEEECSSSS
T ss_pred CCeEEEECCCHHHHHHHHHHHhhCC-cEEEEEcCCc
Confidence 4689999999999999999999997 6999998653
No 489
>3f8d_A Thioredoxin reductase (TRXB-3); redox protein, nucleotide binding, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.40A {Sulfolobus solfataricus} PDB: 3f8p_A* 3f8r_A*
Probab=92.78 E-value=0.39 Score=58.30 Aligned_cols=37 Identities=30% Similarity=0.457 Sum_probs=32.4
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
..++|+|||+|.+|+-+|..|++.|. +|+++++++++
T Consensus 153 ~~~~v~vvG~G~~~~e~a~~l~~~g~-~v~~~~~~~~~ 189 (323)
T 3f8d_A 153 KNRVVAVIGGGDSALEGAEILSSYST-KVYLIHRRDTF 189 (323)
T ss_dssp TTCEEEEECCSHHHHHHHHHHHHHSS-EEEEECSSSSC
T ss_pred CCCEEEEECCCHHHHHHHHHHHHhCC-eEEEEEeCCCC
Confidence 34789999999999999999999997 69999986543
No 490
>2zbw_A Thioredoxin reductase; redox protein, oxidoreductase, structural genomics, NPPSFA, project on protein structural and functional analyses; HET: FAD; 2.10A {Thermus thermophilus}
Probab=92.75 E-value=0.42 Score=58.49 Aligned_cols=35 Identities=31% Similarity=0.454 Sum_probs=31.6
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||+|.+|+-.|..|++.|. +|++++++++
T Consensus 152 ~~~v~viG~G~~g~e~a~~l~~~g~-~V~~v~~~~~ 186 (335)
T 2zbw_A 152 GKRVLIVGGGDSAVDWALNLLDTAR-RITLIHRRPQ 186 (335)
T ss_dssp TCEEEEECSSHHHHHHHHHTTTTSS-EEEEECSSSS
T ss_pred CCEEEEECCCHHHHHHHHHHHhhCC-EEEEEEcCCc
Confidence 5789999999999999999999997 6999998654
No 491
>3qfa_A Thioredoxin reductase 1, cytoplasmic; protein-protein complex, rossmann fold, HO pyridine nucleotide disulfide oxidoreductase, electron TRAN oxidoreductase; HET: FAD; 2.20A {Homo sapiens} PDB: 3qfb_A* 2j3n_A* 2zzc_A* 2zzb_A* 2zz0_A* 2cfy_A* 1h6v_A* 3ean_A* 3eao_A*
Probab=92.71 E-value=0.42 Score=62.49 Aligned_cols=33 Identities=27% Similarity=0.327 Sum_probs=29.9
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
.++|+|||||.+|+-.|..|++.|. +|+++|++
T Consensus 210 ~~~vvVIGgG~ig~E~A~~l~~~G~-~Vtlv~~~ 242 (519)
T 3qfa_A 210 PGKTLVVGASYVALECAGFLAGIGL-DVTVMVRS 242 (519)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCeEEEECCcHHHHHHHHHHHHcCC-eEEEEecc
Confidence 3569999999999999999999998 69999973
No 492
>2x8g_A Thioredoxin glutathione reductase; redox-active center, detoxification pathway, oxidoreductase, flavoprotein; HET: FAD PG4; 1.90A {Schistosoma mansoni} PDB: 2x8c_A* 2x8h_A* 2x99_A* 3h4k_A* 2v6o_A*
Probab=91.85 E-value=0.75 Score=61.38 Aligned_cols=33 Identities=27% Similarity=0.308 Sum_probs=30.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKY 54 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~ 54 (2280)
.++|+|||||.+|+-+|..|++.|. +|+|+|++
T Consensus 286 ~~~vvViGgG~~g~E~A~~l~~~g~-~Vtlv~~~ 318 (598)
T 2x8g_A 286 PGKTLVIGASYVALECAGFLASLGG-DVTVMVRS 318 (598)
T ss_dssp CCSEEEECCSHHHHHHHHHHHHTTC-CEEEEESS
T ss_pred CCEEEEECCCHHHHHHHHHHHHcCC-EEEEEECC
Confidence 3579999999999999999999998 69999975
No 493
>3lzw_A Ferredoxin--NADP reductase 2; ferredoxin reductase, FAD, NADPH, flavoprotein, oxidor; HET: FAD NAP; 1.80A {Bacillus subtilis} PDB: 3lzx_A*
Probab=90.90 E-value=0.87 Score=55.42 Aligned_cols=35 Identities=26% Similarity=0.519 Sum_probs=31.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHT 56 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~r 56 (2280)
.++|+|||+|.+|+-+|..|++.|. +|+++++.++
T Consensus 154 ~~~v~vvG~g~~~~e~a~~l~~~~~-~v~~~~~~~~ 188 (332)
T 3lzw_A 154 GRRVAILGGGDSAVDWALMLEPIAK-EVSIIHRRDK 188 (332)
T ss_dssp TCEEEEECSSHHHHHHHHHHTTTBS-EEEEECSSSS
T ss_pred CCEEEEECCCHhHHHHHHHHHhhCC-eEEEEEecCc
Confidence 4689999999999999999999997 6999998654
No 494
>2e1m_B L-glutamate oxidase; L-amino acid oxidase, FAD, L-GOX, flavo oxidoreductase; HET: FAD; 2.80A {Streptomyces SP}
Probab=90.70 E-value=0.059 Score=55.44 Aligned_cols=45 Identities=16% Similarity=0.021 Sum_probs=39.3
Q ss_pred EEEEeCEEEEcCCcccccccccCCCCChhhHhhhccCCCChhhHh
Q 037878 231 EVMEFDKIIISGAFPVKNGKFYRSPTSKPTESETQVMDMDELEKE 275 (2280)
Q Consensus 231 ~~i~aD~VI~A~p~~v~~~i~f~p~~~~~~~~~l~~~~l~~~~k~ 275 (2280)
++++||+||+|+|+++++.|.|.|++|+.+...+..+.++...|.
T Consensus 4 ~~~~Ad~VIvTvP~~vL~~I~F~P~LP~~k~~Ai~~l~~g~~~Kv 48 (130)
T 2e1m_B 4 QTWTGDLAIVTIPFSSLRFVKVTPPFSYKKRRAVIETHYDQATKV 48 (130)
T ss_dssp EEEEESEEEECSCHHHHTTSEEESCCCHHHHHHHHHCCEECEEEE
T ss_pred eEEEcCEEEEcCCHHHHhcCcCCCCCCHHHHHHHHhCCCcceeEE
Confidence 478999999999999999999999999999999887777665553
No 495
>4gcm_A TRXR, thioredoxin reductase; FAD/NAD-linked reductases, PYR redox 2 family, structural GE joint center for structural genomics, JCSG; HET: MSE FAD NAP EPE; 1.80A {Staphylococcus aureus subsp}
Probab=90.35 E-value=0.19 Score=61.03 Aligned_cols=36 Identities=28% Similarity=0.506 Sum_probs=33.0
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTV 57 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ri 57 (2280)
.++|+|||||..|+-+|..|++.|. +|+|+|+.+++
T Consensus 145 ~k~vvViGgG~ig~E~A~~l~~~g~-~Vtlv~~~~~~ 180 (312)
T 4gcm_A 145 NKRLFVIGGGDSAVEEGTFLTKFAD-KVTIVHRRDEL 180 (312)
T ss_dssp TCEEEEECCSHHHHHHHHHHTTTCS-EEEEECSSSSC
T ss_pred CCEEEEECCCHHHHHHHHHHHhcCC-EEEEEeccccc
Confidence 4689999999999999999999998 69999998765
No 496
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=90.32 E-value=0.31 Score=51.27 Aligned_cols=35 Identities=17% Similarity=0.162 Sum_probs=31.7
Q ss_pred CCCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 20 VNTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 20 ~~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
.+.+|+|||+|-.|...|..|.+.|+ +|+++|++.
T Consensus 6 ~~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~ 40 (140)
T 3fwz_A 6 ICNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSR 40 (140)
T ss_dssp CCSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCH
T ss_pred CCCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCH
Confidence 35689999999999999999999999 699999964
No 497
>3klj_A NAD(FAD)-dependent dehydrogenase, NIRB-family (N- domain); FAD-binding protein, GR-fold, oxidoreductase; HET: FAD; 2.10A {Clostridium acetobutylicum}
Probab=89.94 E-value=0.19 Score=62.92 Aligned_cols=37 Identities=22% Similarity=0.197 Sum_probs=33.7
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
.++|+|||||.+|+-+|..|++.|. +|+|+|+++++.
T Consensus 146 ~~~vvVIGgG~~g~E~A~~l~~~g~-~Vtvv~~~~~~l 182 (385)
T 3klj_A 146 KGKAFIIGGGILGIELAQAIIDSGT-PASIGIILEYPL 182 (385)
T ss_dssp HSCEEEECCSHHHHHHHHHHHHHTC-CEEEECSSSSSC
T ss_pred CCeEEEECCCHHHHHHHHHHHhCCC-eEEEEEcCCccc
Confidence 3689999999999999999999998 699999988764
No 498
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=89.18 E-value=0.32 Score=50.91 Aligned_cols=34 Identities=26% Similarity=0.351 Sum_probs=30.4
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
.++|+|||+|..|...|..|.+.|+ +|+++|++.
T Consensus 4 ~m~i~IiG~G~iG~~~a~~L~~~g~-~v~~~d~~~ 37 (140)
T 1lss_A 4 GMYIIIAGIGRVGYTLAKSLSEKGH-DIVLIDIDK 37 (140)
T ss_dssp -CEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCH
T ss_pred CCEEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 4689999999999999999999998 699999853
No 499
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=89.04 E-value=0.67 Score=62.90 Aligned_cols=40 Identities=25% Similarity=0.267 Sum_probs=34.2
Q ss_pred CCCCCeEEEEC--ccHHHHHHHHHHHhCCCCceEEEecCCCCC
Q 037878 18 LPVNTRIGIVG--GGPSGLSTAYALAKLGYRNVTLLEKYHTVG 58 (2280)
Q Consensus 18 ~~~~~dV~IIG--aGisGLsAA~~La~~G~~~VtVlEk~~riG 58 (2280)
....++|+||| ||.+|+-+|..|++.|. +|+++|+.+++.
T Consensus 520 ~~~g~~VvViG~ggG~~g~e~A~~L~~~g~-~Vtlv~~~~~l~ 561 (690)
T 3k30_A 520 LPDGKKVVVYDDDHYYLGGVVAELLAQKGY-EVSIVTPGAQVS 561 (690)
T ss_dssp CCSSSEEEEEECSCSSHHHHHHHHHHHTTC-EEEEEESSSSTT
T ss_pred CCCCCEEEEEcCCCCccHHHHHHHHHhCCC-eeEEEecccccc
Confidence 34456899999 99999999999999998 699999876653
No 500
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=88.96 E-value=0.36 Score=51.84 Aligned_cols=34 Identities=26% Similarity=0.285 Sum_probs=31.2
Q ss_pred CCeEEEECccHHHHHHHHHHHhCCCCceEEEecCC
Q 037878 21 NTRIGIVGGGPSGLSTAYALAKLGYRNVTLLEKYH 55 (2280)
Q Consensus 21 ~~dV~IIGaGisGLsAA~~La~~G~~~VtVlEk~~ 55 (2280)
.++|+|||+|..|...|..|++.|+ +|++++++.
T Consensus 19 ~~~v~IiG~G~iG~~la~~L~~~g~-~V~vid~~~ 52 (155)
T 2g1u_A 19 SKYIVIFGCGRLGSLIANLASSSGH-SVVVVDKNE 52 (155)
T ss_dssp CCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCG
T ss_pred CCcEEEECCCHHHHHHHHHHHhCCC-eEEEEECCH
Confidence 4689999999999999999999998 699999864
Done!