BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037899
(113 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FZA0|RLF4_ARATH Protein RALF-like 4 OS=Arabidopsis thaliana GN=RALFL4 PE=3 SV=1
Length = 110
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/112 (48%), Positives = 70/112 (62%), Gaps = 7/112 (6%)
Query: 1 MGSKLMSLLFLTTAVVVVAMAAES-RAFDGSNWGRINNVGRINEYDENEMLMPTEESRRQ 59
MG K++ L+F ++++AM A+S A IN G I E DE E LM +E +RRQ
Sbjct: 1 MGVKML-LIF---GLLILAMVAKSVNATYPLTKSCINGQGCIGEDDELESLMDSETNRRQ 56
Query: 60 LWGGG-FISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
L G +I Y AL+ N+VPC+RRG SYY+C NPYRRGCSAIT+C R
Sbjct: 57 LARGRRYIGYDALKKNNVPCSRRGRSYYDCKKRRRN-NPYRRGCSAITHCYR 107
>sp|Q8L9P8|RLF33_ARATH Protein RALF-like 33 OS=Arabidopsis thaliana GN=RALFL33 PE=2 SV=1
Length = 116
Score = 79.0 bits (193), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 44/65 (67%), Gaps = 1/65 (1%)
Query: 46 ENEMLMPTEESRRQLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAI 105
E E M +E +RR L +ISYGALR N+VPC+RRG SYYNC G NPY RGCSAI
Sbjct: 53 EEEFEMDSEINRRILATTKYISYGALRRNTVPCSRRGASYYNCRR-GAQANPYSRGCSAI 111
Query: 106 TNCER 110
T C R
Sbjct: 112 TRCRR 116
>sp|Q6NME6|RLF19_ARATH Protein RALF-like 19 OS=Arabidopsis thaliana GN=RALFL19 PE=3 SV=1
Length = 110
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/80 (53%), Positives = 53/80 (66%), Gaps = 2/80 (2%)
Query: 35 INNVGRINEYDENEMLMPTEESRRQLWGG-GFISYGALRANSVPCNRRGTSYYNCNHGGG 93
+N G I E E + LM +E +RRQL +ISYGALR N+VPC+RRG SYY+C
Sbjct: 32 VNGQGCIGEDGELDYLMDSETNRRQLAARRSYISYGALRKNNVPCSRRGRSYYDCKK-RK 90
Query: 94 PVNPYRRGCSAITNCERVTN 113
NPYRRGCS IT+C R T+
Sbjct: 91 RANPYRRGCSVITHCYRQTS 110
>sp|Q9MA62|RLF22_ARATH Protein RALF-like 22 OS=Arabidopsis thaliana GN=RALFL22 PE=3 SV=1
Length = 119
Score = 73.6 bits (179), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 35/60 (58%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 51 MPTEESRRQLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
++ SRR L +ISYGA+R NSVPC+RRG SYYNC G NPY RGCS IT C R
Sbjct: 61 FDSDISRRILAQKKYISYGAMRRNSVPCSRRGASYYNCQR-GAQANPYSRGCSTITRCRR 119
>sp|Q945T0|RALF_TOBAC Rapid alkalinization factor OS=Nicotiana tabacum GN=RALF PE=1 SV=1
Length = 115
Score = 72.0 bits (175), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 62/112 (55%), Gaps = 7/112 (6%)
Query: 3 SKLMSLLFLTTAVVVVAMAAESRAFD-----GSNWGRINNVGRINEYDENEMLMPTEESR 57
S L+ + + + +A A +S A+D S G ++G +E L +E +R
Sbjct: 5 SGLILCVLIGAFFISMAAAGDSGAYDWVMPARSGGGCKGSIGECIAEEEEFEL-DSESNR 63
Query: 58 RQLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCE 109
R L +ISYGAL+ NSVPC+RRG SYYNC G NPY RGCSAIT C
Sbjct: 64 RILATKKYISYGALQKNSVPCSRRGASYYNCKP-GAQANPYSRGCSAITRCR 114
>sp|Q9LUS7|RLF23_ARATH Rapid alkalinization factor 23 OS=Arabidopsis thaliana GN=RALF23
PE=1 SV=1
Length = 138
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/58 (60%), Positives = 41/58 (70%), Gaps = 1/58 (1%)
Query: 53 TEESRRQLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
+E +RR L +ISYGALR N++PC+RRG SYYNC G NPY RGCSAIT C R
Sbjct: 81 SEINRRILATRRYISYGALRRNTIPCSRRGASYYNCRR-GAQANPYSRGCSAITRCRR 137
>sp|Q9SRY3|RLF1_ARATH Protein RALF-like 1 OS=Arabidopsis thaliana GN=RALF1 PE=1 SV=1
Length = 120
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/113 (39%), Positives = 56/113 (49%), Gaps = 14/113 (12%)
Query: 9 LFLTTAVVVV-------AMAAESRAFDGSNWGRINN-----VGRINE-YDENEMLMPTEE 55
LFLT ++VV A + G W + G I E E M +E
Sbjct: 7 LFLTLTILVVFIISSPPVQAGFANDLGGVAWATTGDNGSGCHGSIAECIGAEEEEMDSEI 66
Query: 56 SRRQLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNC 108
+RR L +ISY +L+ NSVPC+RRG SYYNC + G NPY RGCS I C
Sbjct: 67 NRRILATTKYISYQSLKRNSVPCSRRGASYYNCQN-GAQANPYSRGCSKIARC 118
>sp|Q2HIM9|RLF31_ARATH Protein RALF-like 31 OS=Arabidopsis thaliana GN=RALFL31 PE=3 SV=1
Length = 113
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/111 (38%), Positives = 58/111 (52%), Gaps = 8/111 (7%)
Query: 9 LFLTTAVVVVAM-----AAESRAFDGSNWGRINNVGRINEYDENEMLMPTEESRRQLWGG 63
+F +TA+V+ A+ +A++ N + R + E+E LMPTE SRR L
Sbjct: 1 MFNSTALVIFAILFLLISADAFPIPSPNGEIDAMLIRNSIIGEDEDLMPTEISRRVLMAQ 60
Query: 64 G-FISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCERVTN 113
+I Y LR + VPC + G SYY+C G N Y RGC IT C R TN
Sbjct: 61 KRYIGYETLRRDMVPCQKPGASYYDCRSGQA--NSYSRGCDTITRCARDTN 109
>sp|Q9FHA6|RLF34_ARATH Protein RALF-like 34 OS=Arabidopsis thaliana GN=RALFL34 PE=2 SV=1
Length = 129
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/94 (45%), Positives = 51/94 (54%), Gaps = 12/94 (12%)
Query: 28 DGSNWGRINNVGRINEYDENEMLMPTEES-----RRQLW---GGGFISYGALRANSVPCN 79
DG +W I++ + D E TEE RR L+ +ISYGAL AN VPC
Sbjct: 37 DGFDWP-ISHSDEFDIIDGEESFEVTEEDDGVTDRRSLYWRRTKYYISYGALSANRVPCP 95
Query: 80 -RRGTSYY--NCNHGGGPVNPYRRGCSAITNCER 110
R G SYY NC GPV+PY RGCS+IT C R
Sbjct: 96 PRSGRSYYTHNCFRARGPVHPYSRGCSSITRCRR 129
>sp|Q9LK37|RLF24_ARATH Protein RALF-like 24 OS=Arabidopsis thaliana GN=RALFL24 PE=3 SV=1
Length = 118
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 36/63 (57%), Gaps = 3/63 (4%)
Query: 52 PTEESRR-QLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
P+E SRR + +ISY LR + VPC + G SYY C G N Y RGCS IT C R
Sbjct: 54 PSEISRRVMMMRKQYISYETLRRDMVPCQKPGASYYACRSGQA--NAYNRGCSVITRCAR 111
Query: 111 VTN 113
TN
Sbjct: 112 DTN 114
>sp|O49320|RLF18_ARATH Protein RALF-like 18 OS=Arabidopsis thaliana GN=RALFL18 PE=3 SV=1
Length = 103
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 46/105 (43%), Gaps = 9/105 (8%)
Query: 10 FLTTAVVVVAMAAESRAFDGSNWGRINNVGRINEYDE-NEMLMPTEESRRQLWGGGFISY 68
L AV++++ A GS + +N E +E +M + S R L FI Y
Sbjct: 7 LLIIAVMIISAALLPALVVGSRPVKCDNCMDGGEKEEIMKMSSGVDVSHRILQAKRFIDY 66
Query: 69 GALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCERVTN 113
AL+ N +P G P N YRRGCSA T C R TN
Sbjct: 67 EALKKN-LPAKPDGKP-------DKPDNKYRRGCSAATGCYRFTN 103
>sp|Q9SIU6|RLF14_ARATH Protein RALF-like 14 OS=Arabidopsis thaliana GN=RALFL14 PE=3 SV=1
Length = 101
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 30/58 (51%), Gaps = 8/58 (13%)
Query: 56 SRRQLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCERVTN 113
SRR L +ISY AL+ N +P NRRG NPYRR C ++C R TN
Sbjct: 52 SRRILQASRYISYEALKKN-LPDNRRG-------EPDQRDNPYRRSCDVHSHCYRFTN 101
>sp|O23262|RLF32_ARATH Protein RALF-like 32 OS=Arabidopsis thaliana GN=RALFL32 PE=3 SV=1
Length = 117
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/108 (30%), Positives = 48/108 (44%), Gaps = 7/108 (6%)
Query: 6 MSLLFLTTAVVVVAMAAESRAFDGSNWGRINNVGRINEYDENEMLMPTEESRRQLWGGGF 65
+++ FL + V A S + G + + E +E ++M + S+R
Sbjct: 12 ITIFFLCLLLAHVTSKASSSSLCN---GSVAECSSMVETEEMSVIMESWSSQRLTEEQAH 68
Query: 66 -ISYGALRANSVPCN--RRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
+SYGALR N C+ +RG SY P NPY RGCS C R
Sbjct: 69 KLSYGALRRNQPACDGGKRGESYST-QCLPPPSNPYSRGCSKHYRCGR 115
>sp|A8MRF9|RLF21_ARATH Protein RALF-like 21 OS=Arabidopsis thaliana GN=RALFL21 PE=2 SV=1
Length = 105
Score = 36.6 bits (83), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 24/48 (50%), Gaps = 2/48 (4%)
Query: 63 GGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
G I Y L+ + +PC+ C PVNPYRRGCS I C R
Sbjct: 30 GKVIGYPGLKPD-LPCDHHRYPS-ACAPSEQPVNPYRRGCSKIHRCRR 75
>sp|A8MQI8|RLF5_ARATH Protein RALF-like 5 OS=Arabidopsis thaliana GN=RALFL5 PE=2 SV=1
Length = 89
Score = 33.5 bits (75), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 26/46 (56%), Gaps = 4/46 (8%)
Query: 65 FISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
+I Y + + PCN R + +C + P NPYRRGC+ I+ C R
Sbjct: 28 YIEYPPWQKH--PCNPRFPTP-DC-YKRTPANPYRRGCTCISRCRR 69
>sp|A8MQ92|RLF2_ARATH Protein RALF-like 2 OS=Arabidopsis thaliana GN=RALFL2 PE=3 SV=1
Length = 97
Score = 33.1 bits (74), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 81 RGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
RG S + + P PY+RGC IT CER
Sbjct: 40 RGCSPKDPSCPQQPEKPYKRGCEKITRCER 69
>sp|A7REE5|RLF3_ARATH Protein RALF-like 3 OS=Arabidopsis thaliana GN=RALFL3 PE=3 SV=1
Length = 90
Score = 32.0 bits (71), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 12/17 (70%), Positives = 13/17 (76%)
Query: 94 PVNPYRRGCSAITNCER 110
P NPYRRGC IT C+R
Sbjct: 72 PANPYRRGCLKITRCQR 88
>sp|O65919|RLF10_ARATH Protein RALF-like 10 OS=Arabidopsis thaliana GN=RALFL10 PE=2 SV=1
Length = 73
Score = 31.2 bits (69), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 25/56 (44%), Gaps = 4/56 (7%)
Query: 55 ESRRQLWGGGFISYGALRANSVPCNRRGTSYYNCNHGGGPVNPYRRGCSAITNCER 110
ESRR+ G I+ A C G N P N YRRGCS IT C+R
Sbjct: 21 ESRRKHLDYGVITKCAGPNPPPGCYPPGAQQKN----PTPANEYRRGCSKITRCKR 72
>sp|A8MRM1|RLF16_ARATH Protein RALF-like 16 OS=Arabidopsis thaliana GN=RALFL16 PE=3 SV=1
Length = 95
Score = 30.8 bits (68), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 5/46 (10%)
Query: 66 ISYGALRANSVPCNRRGTSYYNCNHG-GGPVNPYRRGCSAITNCER 110
+ YG+++ + +P Y N N PVN Y RGC IT C R
Sbjct: 32 LGYGSIKGDRIP----ACGYKNPNSCVKQPVNHYHRGCEKITRCAR 73
>sp|Q7V652|LGT_PROMM Prolipoprotein diacylglyceryl transferase OS=Prochlorococcus
marinus (strain MIT 9313) GN=lgt PE=3 SV=1
Length = 304
Score = 30.4 bits (67), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 45/93 (48%), Gaps = 17/93 (18%)
Query: 3 SKLMSLLFLTTAV--VVVAMAAESRAFDGSN-WGRINNVGRINEYDENEMLMPTEESRRQ 59
S L+ +L LT+ V + +A E R + G+N W IN G + +P S +
Sbjct: 56 SDLLPILVLTSVVGARIYYVAFEWRNYSGNNFWSSINIFG---------LAIPIP-SAVE 105
Query: 60 LWGGGFISYGALRANSVP----CNRRGTSYYNC 88
+WGGG +GAL A ++ C R ++++
Sbjct: 106 IWGGGIAIHGALLAGTLAVLIFCRWRRQAFWDV 138
>sp|A2C7F4|LGT_PROM3 Prolipoprotein diacylglyceryl transferase OS=Prochlorococcus
marinus (strain MIT 9303) GN=lgt PE=3 SV=1
Length = 304
Score = 28.9 bits (63), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 26/93 (27%), Positives = 43/93 (46%), Gaps = 17/93 (18%)
Query: 3 SKLMSLLFLTTAV--VVVAMAAESRAFDGSN-WGRINNVGRINEYDENEMLMPTEESRRQ 59
S L+ +L LT V + +A E R + G N W IN G + +P S +
Sbjct: 56 SDLLPILVLTAVVGARIYYVAFEWRNYSGDNFWSSINIFG---------LAIPIP-SAME 105
Query: 60 LWGGGFISYGALRANSVP----CNRRGTSYYNC 88
+WGGG +GAL + ++ C R ++++
Sbjct: 106 IWGGGIAIHGALLSGTLAVLIFCRWRRQAFWDV 138
>sp|Q9LSG0|RLF25_ARATH Protein RALF-like 25 OS=Arabidopsis thaliana GN=RALFL25 PE=3 SV=1
Length = 74
Score = 28.9 bits (63), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 22/45 (48%), Gaps = 7/45 (15%)
Query: 70 ALRANSVP-CNRRGTSYYNCNHGGGPVNPYRRGCSAITNCERVTN 113
LR N+ P C+R+ PVN Y RGC+ I C RV N
Sbjct: 35 CLRPNAPPGCHRQPYK------PRTPVNVYSRGCTTINRCRRVQN 73
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.134 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,000,900
Number of Sequences: 539616
Number of extensions: 1543367
Number of successful extensions: 2429
Number of sequences better than 100.0: 32
Number of HSP's better than 100.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 2395
Number of HSP's gapped (non-prelim): 32
length of query: 113
length of database: 191,569,459
effective HSP length: 81
effective length of query: 32
effective length of database: 147,860,563
effective search space: 4731538016
effective search space used: 4731538016
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 55 (25.8 bits)