Query 037901
Match_columns 119
No_of_seqs 48 out of 50
Neff 2.7
Searched_HMMs 13730
Date Mon Mar 25 08:45:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037901.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037901hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1k1va_ a.37.1.1 (A:) Mafg {Mo 15.2 19 0.0014 20.7 0.4 11 102-112 1-11 (41)
2 d2bbya_ a.4.5.15 (A:) DNA-bind 14.6 25 0.0018 21.6 0.8 22 39-60 33-57 (69)
3 d3d9ra1 d.17.4.27 (A:3-134) Un 9.1 22 0.0016 20.8 -0.8 17 99-115 21-37 (132)
4 d1nwwa_ d.17.4.8 (A:) Limonene 7.1 73 0.0053 19.2 1.0 17 99-115 31-47 (145)
5 d1gxea_ b.1.1.4 (A:) Cardiac m 6.2 69 0.0051 18.0 0.6 7 3-9 2-8 (130)
6 d2clyb1 f.53.1.1 (B:4-123) ATP 4.8 1.5E+02 0.011 19.1 1.7 12 39-50 58-69 (120)
7 d1q2ha_ a.34.4.1 (A:) Adapter 4.6 42 0.0031 20.3 -1.3 7 13-19 1-7 (63)
8 d1auya_ b.121.4.6 (A:) Tymovir 4.3 94 0.0068 21.8 0.3 13 62-74 115-127 (163)
9 d1q60a_ d.288.1.1 (A:) General 4.3 1.8E+02 0.013 18.7 1.6 15 3-17 48-62 (99)
10 d1zvfa1 b.82.1.20 (A:1-175) 3- 4.2 97 0.0071 21.9 0.2 17 4-28 91-107 (175)
No 1
>d1k1va_ a.37.1.1 (A:) Mafg {Mouse (Mus musculus) [TaxId: 10090]}
Probab=15.19 E-value=19 Score=20.65 Aligned_cols=11 Identities=27% Similarity=0.564 Sum_probs=8.4
Q ss_pred cchhhhhcccc
Q 037901 102 FDDEQFMSMFT 112 (119)
Q Consensus 102 ~dDeQ~mSMFs 112 (119)
+.|||||+|=.
T Consensus 1 lsDe~L~~~sv 11 (41)
T d1k1va_ 1 LTDEELVTMSV 11 (41)
T ss_dssp CCHHHHHHSCH
T ss_pred CCHHHHhhCcH
Confidence 46999999843
No 2
>d2bbya_ a.4.5.15 (A:) DNA-binding domain from rap30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=14.60 E-value=25 Score=21.65 Aligned_cols=22 Identities=23% Similarity=0.508 Sum_probs=16.8
Q ss_pred CCC-chHHHhhCchh--hcccCCCC
Q 037901 39 HNP-SWVDEFLDFSS--ARRGTHRR 60 (119)
Q Consensus 39 ~~p-sWlDe~L~~~~--~rrg~HRR 60 (119)
.|| .||.|.|++-+ .++|.|+-
T Consensus 33 ~QP~~yLKeiL~eIa~~~~~g~~~~ 57 (69)
T d2bbya_ 33 KQPVVYLKEILKEIGVQNVKGIHKN 57 (69)
T ss_dssp CSCHHHHHHHHHHHCCEECCTTCCC
T ss_pred hChHHHHHHHHHHHHHHHcCCCcCC
Confidence 677 89999999864 47787763
No 3
>d3d9ra1 d.17.4.27 (A:3-134) Uncharacterized protein ECA1476 {Pectobacterium atrosepticum [TaxId: 29471]}
Probab=9.11 E-value=22 Score=20.79 Aligned_cols=17 Identities=29% Similarity=0.501 Sum_probs=14.4
Q ss_pred CCccchhhhhcccccCC
Q 037901 99 FDKFDDEQFMSMFTDDL 115 (119)
Q Consensus 99 FDr~dDeQ~mSMFsD~~ 115 (119)
|++-|=+.++++|++|.
T Consensus 21 ~~~~D~~~~~~l~t~Da 37 (132)
T d3d9ra1 21 FNRADIPAVIATYTDDG 37 (132)
T ss_dssp HHTTCHHHHHHTEEEEE
T ss_pred HHcCCHHHHHHhcCCCe
Confidence 67778899999999884
No 4
>d1nwwa_ d.17.4.8 (A:) Limonene-1,2-epoxide hydrolase {Rhodococcus erythropolis [TaxId: 1833]}
Probab=7.08 E-value=73 Score=19.22 Aligned_cols=17 Identities=18% Similarity=0.454 Sum_probs=13.5
Q ss_pred CCccchhhhhcccccCC
Q 037901 99 FDKFDDEQFMSMFTDDL 115 (119)
Q Consensus 99 FDr~dDeQ~mSMFsD~~ 115 (119)
|..-|=+.++++|+||+
T Consensus 31 ~~~~D~~~~~~~~~~D~ 47 (145)
T d1nwwa_ 31 LTSNDAAKLIEYFAEDT 47 (145)
T ss_dssp GGGCCHHHHHTTBCSSC
T ss_pred HHcCCHHHHHHHHhccc
Confidence 45557788999999986
No 5
>d1gxea_ b.1.1.4 (A:) Cardiac myosin binding protein C, different domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=6.25 E-value=69 Score=18.01 Aligned_cols=7 Identities=71% Similarity=1.009 Sum_probs=5.8
Q ss_pred CCCCCCC
Q 037901 3 QLPPKIP 9 (119)
Q Consensus 3 QLPPKIP 9 (119)
|-||||.
T Consensus 2 q~PP~i~ 8 (130)
T d1gxea_ 2 QEPPKIH 8 (130)
T ss_dssp CBCCCSC
T ss_pred CCCCEEE
Confidence 7899984
No 6
>d2clyb1 f.53.1.1 (B:4-123) ATP synthase subunit d, mitochondrial {Cow (Bos taurus) [TaxId: 9913]}
Probab=4.80 E-value=1.5e+02 Score=19.06 Aligned_cols=12 Identities=25% Similarity=0.340 Sum_probs=8.6
Q ss_pred CCCchHHHhhCc
Q 037901 39 HNPSWVDEFLDF 50 (119)
Q Consensus 39 ~~psWlDe~L~~ 50 (119)
..|.|||+|-.-
T Consensus 58 ~~~~~VD~fek~ 69 (120)
T d2clyb1 58 AKAGLVDDFEKK 69 (120)
T ss_dssp SSTTHHHHHHHH
T ss_pred ccHHHHHHHHHH
Confidence 457899998544
No 7
>d1q2ha_ a.34.4.1 (A:) Adapter protein APS, dimerisation domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=4.58 E-value=42 Score=20.33 Aligned_cols=7 Identities=43% Similarity=1.317 Sum_probs=5.3
Q ss_pred CCCCccc
Q 037901 13 PAWPDFF 19 (119)
Q Consensus 13 ~~wp~f~ 19 (119)
|.|.|||
T Consensus 1 p~W~EFC 7 (63)
T d1q2ha_ 1 PDWRQFC 7 (63)
T ss_dssp CCHHHHH
T ss_pred CCHHHHH
Confidence 5688888
No 8
>d1auya_ b.121.4.6 (A:) Tymovirus coat protein {TYMV (Turnip yellow mosaic virus) [TaxId: 12154]}
Probab=4.32 E-value=94 Score=21.76 Aligned_cols=13 Identities=62% Similarity=1.030 Sum_probs=10.8
Q ss_pred CCcceeeccCcch
Q 037901 62 VSDSITYLEAPML 74 (119)
Q Consensus 62 ~SDSvafld~~~~ 74 (119)
.-|||.|+|.|-+
T Consensus 115 IKdSV~YtDtPkL 127 (163)
T d1auya_ 115 VKDSIQYLDSPKL 127 (163)
T ss_dssp EECSSCCSCCEEE
T ss_pred EeccccccCCCcE
Confidence 4699999999863
No 9
>d1q60a_ d.288.1.1 (A:) General transcription factor II-I {Mouse (Mus musculus) [TaxId: 10090]}
Probab=4.27 E-value=1.8e+02 Score=18.73 Aligned_cols=15 Identities=27% Similarity=0.361 Sum_probs=10.3
Q ss_pred CCCCCCCCCCCCCCc
Q 037901 3 QLPPKIPNMTPAWPD 17 (119)
Q Consensus 3 QLPPKIP~~~~~wp~ 17 (119)
-||+.||+=.|+|=+
T Consensus 48 GLPegI~Fr~P~~yg 62 (99)
T d1q60a_ 48 GLPEGVPFRRPSTFG 62 (99)
T ss_dssp SCCTTCCSCCTTTSC
T ss_pred eCCCCCcCCCCCccC
Confidence 489999985555533
No 10
>d1zvfa1 b.82.1.20 (A:1-175) 3-hydroxyanthranilate-3,4-dioxygenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=4.17 E-value=97 Score=21.88 Aligned_cols=17 Identities=18% Similarity=0.471 Sum_probs=0.0
Q ss_pred CCCCCCCCCCCCCccccccCCcccc
Q 037901 4 LPPKIPNMTPAWPDFFHHKVPSSMA 28 (119)
Q Consensus 4 LPPKIP~~~~~wp~f~~q~~ps~~g 28 (119)
|||+||- |-|+.+.++|
T Consensus 91 LP~~vPH--------SPqR~~~tiG 107 (175)
T d1zvfa1 91 LPGNVPH--------SPVRFADTVG 107 (175)
T ss_dssp ECTTCCE--------EEEECTTCEE
T ss_pred eCCCCCC--------CCCCCCCceE
Done!