BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037905
(606 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3UIM|A Chain A, Structural Basis For The Impact Of Phosphorylation On
Plant Receptor- Like Kinase Bak1 Activation
pdb|3ULZ|A Chain A, Crystal Structure Of Apo Bak1
Length = 326
Score = 169 bits (427), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/274 (37%), Positives = 159/274 (58%), Gaps = 14/274 (5%)
Query: 324 VLGKGTFGTAYKATLEMGIVVAVKRLKDVTVS--EKEFREKMEVVGSMDHENLVPLRAYY 381
+LG+G FG YK L G +VAVKRLK+ E +F+ ++E++ H NL+ LR +
Sbjct: 37 ILGRGGFGKVYKGRLADGXLVAVKRLKEERTQGGELQFQTEVEMISMAVHRNLLRLRGFC 96
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK-GPAN 440
+ E+LLV+ YM GS+++ L R + PL+W R +ALG++R +AYLH P
Sbjct: 97 MTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRIALGSARGLAYLHDHCDPKI 155
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-----GYRAPEVTDARKVSQK 495
H ++K++NILL + +EA + DFGLA L G+ APE K S+K
Sbjct: 156 IHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVRGXIGHIAPEYLSTGKSSEK 215
Query: 496 ADVYSFGVLLLELLTGKAPTQ--ALLNEEGVDLPRWVQSVVKEEWTAEVFDLELL-RYQN 552
DV+ +GV+LLEL+TG+ L N++ V L WV+ ++KE+ + D++L Y++
Sbjct: 216 TDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLLKEKKLEALVDVDLQGNYKD 275
Query: 553 VEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
EE+ QL+Q+A+ CT P RP M+EV +E
Sbjct: 276 --EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 307
>pdb|3TL8|A Chain A, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|D Chain D, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|G Chain G, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
pdb|3TL8|H Chain H, The Avrptob-Bak1 Complex Reveals Two Structurally Similar
Kinaseinteracting Domains In A Single Type Iii Effector
Length = 349
Score = 168 bits (425), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 109/293 (37%), Positives = 166/293 (56%), Gaps = 19/293 (6%)
Query: 310 RAFDLEDLLRAS-----AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVS--EKEFREK 362
+ F L +L AS +LG+G FG YK L G +VAVKRLK+ E +F+ +
Sbjct: 26 KRFSLRELQVASDNFSNKNILGRGGFGKVYKGRLADGTLVAVKRLKEERXQGGELQFQTE 85
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E++ H NL+ LR + + E+LLV+ YM GS+++ L R + PL+W R +
Sbjct: 86 VEMISMAVHRNLLRLRGFCMTPTERLLVYPYMANGSVASCLR-ERPESQPPLDWPKRQRI 144
Query: 423 ALGASRAIAYLHSK-GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-- 479
ALG++R +AYLH P H ++K++NILL + +EA + DFGLA L
Sbjct: 145 ALGSARGLAYLHDHCDPKIIHRDVKAANILLDEEFEAVVGDFGLAKLMDYKDXHVXXAVR 204
Query: 480 ---GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQ--ALLNEEGVDLPRWVQSVV 534
G+ APE K S+K DV+ +GV+LLEL+TG+ L N++ V L WV+ ++
Sbjct: 205 GTIGHIAPEYLSTGKSSEKTDVFGYGVMLLELITGQRAFDLARLANDDDVMLLDWVKGLL 264
Query: 535 KEEWTAEVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
KE+ + D++L Y++ EE+ QL+Q+A+ CT P RP M+EV +E
Sbjct: 265 KEKKLEALVDVDLQGNYKD--EEVEQLIQVALLCTQSSPMERPKMSEVVRMLE 315
>pdb|2NRY|A Chain A, Crystal Structure Of Irak-4
pdb|2NRY|B Chain B, Crystal Structure Of Irak-4
pdb|2NRY|C Chain C, Crystal Structure Of Irak-4
pdb|2NRY|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (299), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 116/198 (58%), Gaps = 17/198 (8%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLK---DVTVSE--KEFREKMEVVGSMDHENLVPLRA 379
+G+G FG YK + VAVK+L D+T E ++F ++++V+ HENLV L
Sbjct: 39 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ D+ LV+ YMP GSL L G PL+W R +A GA+ I +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHEN--H 153
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLA---SPSSTPNRIDG---YRAPEVTDARKVS 493
+ H +IKS+NILL +++ A+ISDFGLA + + + +RI G Y APE +++
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXSRIVGTTAYMAPEALRG-EIT 212
Query: 494 QKADVYSFGVLLLELLTG 511
K+D+YSFGV+LLE++TG
Sbjct: 213 PKSDIYSFGVVLLEIITG 230
>pdb|2NRU|A Chain A, Crystal Structure Of Irak-4
pdb|2NRU|B Chain B, Crystal Structure Of Irak-4
pdb|2NRU|C Chain C, Crystal Structure Of Irak-4
pdb|2NRU|D Chain D, Crystal Structure Of Irak-4
Length = 307
Score = 119 bits (297), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 115/198 (58%), Gaps = 17/198 (8%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLK---DVTVSE--KEFREKMEVVGSMDHENLVPLRA 379
+G+G FG YK + VAVK+L D+T E ++F ++++V+ HENLV L
Sbjct: 39 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 97
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ D+ LV+ YMP GSL L G PL+W R +A GA+ I +LH
Sbjct: 98 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHEN--H 153
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLA---SPSSTPNRIDG---YRAPEVTDARKVS 493
+ H +IKS+NILL +++ A+ISDFGLA + + + RI G Y APE +++
Sbjct: 154 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQTVMXXRIVGTTAYMAPEALRG-EIT 212
Query: 494 QKADVYSFGVLLLELLTG 511
K+D+YSFGV+LLE++TG
Sbjct: 213 PKSDIYSFGVVLLEIITG 230
>pdb|2OIB|A Chain A, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|B Chain B, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|C Chain C, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIB|D Chain D, Crystal Structure Of Irak4 Kinase Domain Apo Form
pdb|2OIC|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OIC|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Staurosporine
pdb|2OID|A Chain A, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|B Chain B, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|C Chain C, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
pdb|2OID|D Chain D, Crystal Structure Of Irak4 Kinase Domain Complexed With
Amppnp
Length = 301
Score = 118 bits (295), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 114/198 (57%), Gaps = 17/198 (8%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLK---DVTVSE--KEFREKMEVVGSMDHENLVPLRA 379
+G+G FG YK + VAVK+L D+T E ++F ++++V+ HENLV L
Sbjct: 33 MGEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVMAKCQHENLVELLG 91
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ D+ LV+ YMP GSL L G PL+W R +A GA+ I +LH
Sbjct: 92 FSSDGDDLCLVYVYMPNGSLLDRLSCLDGT--PPLSWHMRCKIAQGAANGINFLHEN--H 147
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLA---SPSSTPNRIDG---YRAPEVTDARKVS 493
+ H +IKS+NILL +++ A+ISDFGLA + + RI G Y APE +++
Sbjct: 148 HIHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVMXXRIVGTTAYMAPEALRG-EIT 206
Query: 494 QKADVYSFGVLLLELLTG 511
K+D+YSFGV+LLE++TG
Sbjct: 207 PKSDIYSFGVVLLEIITG 224
>pdb|2O8Y|A Chain A, Apo Irak4 Kinase Domain
pdb|2O8Y|B Chain B, Apo Irak4 Kinase Domain
Length = 298
Score = 114 bits (286), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 77/197 (39%), Positives = 112/197 (56%), Gaps = 17/197 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRLK---DVTVSE--KEFREKMEVVGSMDHENLVPLRAY 380
G+G FG YK + VAVK+L D+T E ++F ++++V HENLV L +
Sbjct: 31 GEGGFGVVYKGYVN-NTTVAVKKLAAMVDITTEELKQQFDQEIKVXAKCQHENLVELLGF 89
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
D+ LV+ Y P GSL L G PL+W R +A GA+ I +LH +
Sbjct: 90 SSDGDDLCLVYVYXPNGSLLDRLSCLDGT--PPLSWHXRCKIAQGAANGINFLHEN--HH 145
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLA---SPSSTPNRIDG---YRAPEVTDARKVSQ 494
H +IKS+NILL +++ A+ISDFGLA + + +RI G Y APE +++
Sbjct: 146 IHRDIKSANILLDEAFTAKISDFGLARASEKFAQXVXXSRIVGTTAYXAPEALRG-EITP 204
Query: 495 KADVYSFGVLLLELLTG 511
K+D+YSFGV+LLE++TG
Sbjct: 205 KSDIYSFGVVLLEIITG 221
>pdb|2QKW|B Chain B, Structural Basis For Activation Of Plant Immunity By
Bacterial Effector Protein Avrpto
Length = 321
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 11/274 (4%)
Query: 324 VLGKGTFGTAYKATLEMGIVVAVKR-LKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
++G G FG YK L G VA+KR + + +EF ++E + H +LV L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 383 SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSH 442
R+E +L++ YM G+L L+G+ ++WE R + +GA+R + YLH++ A H
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTR--AIIH 162
Query: 443 GNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID------GYRAPEVTDARKVSQKA 496
++KS NILL +++ +I+DFG++ + + GY PE ++++K+
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELDQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 497 DVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
DVYSFGV+L E+L ++ L E V+L W ++ D L + E
Sbjct: 223 DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KIRPES 281
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICR 590
+ + A+ C A ++RPSM +V ++E R
Sbjct: 282 LRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|3HGK|A Chain A, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|B Chain B, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|C Chain C, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
pdb|3HGK|D Chain D, Crystal Structure Of Effect Protein Avrptob Complexed With
Kinase Pto
Length = 327
Score = 112 bits (281), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 82/274 (29%), Positives = 140/274 (51%), Gaps = 11/274 (4%)
Query: 324 VLGKGTFGTAYKATLEMGIVVAVKR-LKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
++G G FG YK L G VA+KR + + +EF ++E + H +LV L +
Sbjct: 46 LIGHGVFGKVYKGVLRDGAKVALKRRTPESSQGIEEFETEIETLSFCRHPHLVSLIGFCD 105
Query: 383 SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSH 442
R+E +L++ YM G+L L+G+ ++WE R + +GA+R + YLH++ A H
Sbjct: 106 ERNEMILIYKYMENGNLKRHLYGS-DLPTMSMSWEQRLEICIGAARGLHYLHTR--AIIH 162
Query: 443 GNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID------GYRAPEVTDARKVSQKA 496
++KS NILL +++ +I+DFG++ + + GY PE ++++K+
Sbjct: 163 RDVKSINILLDENFVPKITDFGISKKGTELGQTHLXXVVKGTLGYIDPEYFIKGRLTEKS 222
Query: 497 DVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
DVYSFGV+L E+L ++ L E V+L W ++ D L + E
Sbjct: 223 DVYSFGVVLFEVLCARSAIVQSLPREMVNLAEWAVESHNNGQLEQIVDPNLAD-KIRPES 281
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICR 590
+ + A+ C A ++RPSM +V ++E R
Sbjct: 282 LRKFGDTAVKCLALSSEDRPSMGDVLWKLEYALR 315
>pdb|3P86|A Chain A, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
pdb|3P86|B Chain B, Crystal Structure Of Ctr1 Kinase Domain Mutant D676n In
Complex With Staurosporine
Length = 309
Score = 100 bits (250), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 82/291 (28%), Positives = 133/291 (45%), Gaps = 36/291 (12%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEK---EFREKMEVVGSMDHENLVPLRA 379
E +G G+FGT ++A G VAVK L + + EF ++ ++ + H N+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+V +Y+ GSL LLH + R L+ R +A ++ + YLH++ P
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHL--------ASPSSTPNRIDGYRAPEVTDARK 491
H N+KS N+L+ K Y ++ DFGL+ L S + TP + APEV
Sbjct: 160 IVHRNLKSPNLLVDKKYTVKVCDFGLSRLKASTFLSSKSAAGTPE----WMAPEVLRDEP 215
Query: 492 VSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY- 550
++K+DVYSFGV+L EL T + P L + V A F + L
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVV--------------AAVGFKCKRLEIP 261
Query: 551 QNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAHDL 601
+N+ ++ +++ C P RPS A + + + +S++ DL
Sbjct: 262 RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSDL 309
>pdb|3PPZ|A Chain A, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
pdb|3PPZ|B Chain B, Crystal Structure Of Ctr1 Kinase Domain In Complex With
Staurosporine
Length = 309
Score = 98.2 bits (243), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 80/291 (27%), Positives = 133/291 (45%), Gaps = 36/291 (12%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEK---EFREKMEVVGSMDHENLVPLRA 379
E +G G+FGT ++A G VAVK L + + EF ++ ++ + H N+V
Sbjct: 43 EKIGAGSFGTVHRAEWH-GSDVAVKILMEQDFHAERVNEFLREVAIMKRLRHPNIVLFMG 101
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+V +Y+ GSL LLH + R L+ R +A ++ + YLH++ P
Sbjct: 102 AVTQPPNLSIVTEYLSRGSLYRLLH--KSGAREQLDERRRLSMAYDVAKGMNYLHNRNPP 159
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLAS--------PSSTPNRIDGYRAPEVTDARK 491
H ++KS N+L+ K Y ++ DFGL+ L + + TP + APEV
Sbjct: 160 IVHRDLKSPNLLVDKKYTVKVCDFGLSRLKASXFLXSKXAAGTPE----WMAPEVLRDEP 215
Query: 492 VSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY- 550
++K+DVYSFGV+L EL T + P L + V A F + L
Sbjct: 216 SNEKSDVYSFGVILWELATLQQPWGNLNPAQVV--------------AAVGFKCKRLEIP 261
Query: 551 QNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAHDL 601
+N+ ++ +++ C P RPS A + + + +S++ DL
Sbjct: 262 RNLNPQVAAIIE---GCWTNEPWKRPSFATIMDLLRPLIKSAVPPPNRSDL 309
>pdb|3QGW|A Chain A, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGW|B Chain B, Crystal Structure Of Itk Kinase Bound To An Inhibitor
pdb|3QGY|A Chain A, Crystal Structure Of Itk Inhibitor Complex
pdb|3QGY|B Chain B, Crystal Structure Of Itk Inhibitor Complex
Length = 286
Score = 91.3 bits (225), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 123/275 (44%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
+G G FG + VA+K +K+ ++SE +F E+ EV+ + H LV L +
Sbjct: 35 IGSGQFGLVHLGYWLNKDKVAIKTIKEGSMSEDDFIEEAEVMMKLSHPKLVQLYGVCLEQ 94
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
LV ++M G LS L RG ET G+ L +AYL H +
Sbjct: 95 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEA--CVIHRD 148
Query: 445 IKSSNILLSKSYEARISDFGLAHLA----SPSSTPNRID-GYRAPEVTDARKVSQKADVY 499
+ + N L+ ++ ++SDFG+ SST + + +PEV + S K+DV+
Sbjct: 149 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 208
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFGVL+ E+ + GK P + N E VV++ T R
Sbjct: 209 SFGVLMWEVFSEGKIPYENRSNSE----------VVEDISTG-------FRLYKPRLAST 251
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ Q+ +C + P++RP+ + + Q+ EI S L
Sbjct: 252 HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 286
>pdb|2DQ7|X Chain X, Crystal Structure Of Fyn Kinase Domain Complexed With
Staurosporine
Length = 283
Score = 91.3 bits (225), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 83/294 (28%), Positives = 137/294 (46%), Gaps = 32/294 (10%)
Query: 313 DLEDLLRASAEV---LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSM 369
D+ ++ R S ++ LG G FG + T VA+K LK T+S + F E+ +++ +
Sbjct: 2 DVWEIPRESLQLIKRLGNGQFGEVWMGTWNGNTKVAIKTLKPGTMSPESFLEEAQIMKKL 61
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
H+ LV L A S + +V +YM GSL L G GR L +A +
Sbjct: 62 KHDKLVQLYA-VVSEEPIYIVTEYMNKGSLLDFLKD--GEGRA-LKLPNLVDMAAQVAAG 117
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAP 484
+AY+ H +++S+NIL+ +I+DFGLA L + R + AP
Sbjct: 118 MAYIERMN--YIHRDLRSANILVGNGLICKIADFGLARLIEDNEXTARQGAKFPIKWTAP 175
Query: 485 EVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVF 543
E + + K+DV+SFG+LL EL+T G+ P + N E V V+ +
Sbjct: 176 EAALYGRFTIKSDVWSFGILLTELVTKGRVPYPGMNNRE-------VLEQVERGY----- 223
Query: 544 DLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
R ++ + L +L I+C + P+ RP+ + S +E+ ++ Q Q
Sbjct: 224 -----RMPCPQDCPISLHELMIHCWKKDPEERPTFEYLQSFLEDYFTATEPQYQ 272
>pdb|3MPM|A Chain A, Lck Complexed With A Pyrazolopyrimidine
Length = 267
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 129/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 14 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 73
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G L +A + +A++ +
Sbjct: 74 -TQEPIYIITEYMENGSLVDFLKTPSGIK---LTINKLLDMAAQIAEGMAFIEERN--YI 127
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H N++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 128 HRNLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 187
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 188 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 233
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 234 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 263
>pdb|3KMM|A Chain A, Structure Of Human Lck Kinase With A Small Molecule
Inhibitor
Length = 288
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 27 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 85
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 86 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 140
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 141 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 200
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 201 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 246
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
E+ QL++L C + P++RP+ + S +E+ ++ Q Q
Sbjct: 247 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQFQPQ 287
>pdb|1QPE|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
pdb|1QPJ|A Chain A, Crystal Structure Of The Lymphocyte-Specific Kinase Lck In
Complex With Staurosporine.
pdb|1QPC|A Chain A, Structural Analysis Of The Lymphocyte-Specific Kinase Lck
In Complex With Non-Selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 131
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 237
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
E+ QL++L C + P++RP+ + S +E+ ++ Q Q
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|4HCT|A Chain A, Crystal Structure Of Itk In Complex With Compound 52
pdb|4HCU|A Chain A, Crystal Structure Of Itk In Complext With Compound 40
pdb|4HCV|A Chain A, Crystal Structure Of Itk In Complex With Compound 53
Length = 269
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 78/295 (26%), Positives = 128/295 (43%), Gaps = 33/295 (11%)
Query: 306 GKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV 365
G G D +L + +G G FG + VA+K +++ +SE++F E+ EV
Sbjct: 1 GSGKWVIDPSEL--TFVQEIGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEV 58
Query: 366 VGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG 425
+ + H LV L + LV ++M G LS L RG ET G+ L
Sbjct: 59 MMKLSHPKLVQLYGVCLEQAPICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLD 114
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLA----SPSSTPNRID-G 480
+AYL H ++ + N L+ ++ ++SDFG+ SST +
Sbjct: 115 VCEGMAYLEE--ACVIHRDLAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVK 172
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWT 539
+ +PEV + S K+DV+SFGVL+ E+ + GK P + N E V+
Sbjct: 173 WASPEVFSFSRYSSKSDVWSFGVLMWEVFSEGKIPYENRSNSEVVE-------------- 218
Query: 540 AEVFDLEL-LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
D+ R + Q+ +C + P++RP+ + + Q+ EI S L
Sbjct: 219 ----DISTGFRLYKPRLASTHVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 269
>pdb|3DTC|A Chain A, Crystal Structure Of Mixed-Lineage Kinase Mlk1 Complexed
With Compound 16
Length = 271
Score = 90.5 bits (223), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 80/283 (28%), Positives = 130/283 (45%), Gaps = 41/283 (14%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLK-----DVTVSEKEFREKMEVVGSMDHENLVPL 377
E++G G FG Y+A +G VAVK + D++ + + R++ ++ + H N++ L
Sbjct: 13 EIIGIGGFGKVYRA-FWIGDEVAVKAARHDPDEDISQTIENVRQEAKLFAMLKHPNIIAL 71
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
R LV ++ G L+ +L G R +NW A+ +R + YLH +
Sbjct: 72 RGVCLKEPNLCLVMEFARGGPLNRVLSGKRIPPDILVNW------AVQIARGMNYLHDEA 125
Query: 438 PANS-HGNIKSSNILLSKSYE--------ARISDFGLA---HLASPSSTPNRIDGYRAPE 485
H ++KSSNIL+ + E +I+DFGLA H + S + APE
Sbjct: 126 IVPIIHRDLKSSNILILQKVENGDLSNKILKITDFGLAREWHRTTKMSAAGAY-AWMAPE 184
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDL 545
V A S+ +DV+S+GVLL ELLTG+ P + G+D + + + L
Sbjct: 185 VIRASMFSKGSDVWSYGVLLWELLTGEVPFR------GID-------GLAVAYGVAMNKL 231
Query: 546 ELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L E +L++ +C P +RPS + Q+ I
Sbjct: 232 ALPIPSTCPEPFAKLME---DCWNPDPHSRPSFTNILDQLTTI 271
>pdb|3V5J|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5J|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 090
pdb|3V5L|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|C Chain C, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V5L|D Chain D, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 542
pdb|3V8T|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8T|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 477
pdb|3V8W|A Chain A, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
pdb|3V8W|B Chain B, Crystal Structure Of Interleukin-2 Inducible T-Cell Kinase
Itk Catalytic Domain With Thienopyrazolylindole
Inhibitor 469
Length = 266
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
+G G FG + VA+K +++ +SE++F E+ EV+ + H LV L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
LV ++M G LS L RG ET G+ L +AYL H +
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE--ACVIHRD 128
Query: 445 IKSSNILLSKSYEARISDFGLAHLA----SPSSTPNRID-GYRAPEVTDARKVSQKADVY 499
+ + N L+ ++ ++SDFG+ SST + + +PEV + S K+DV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFGVL+ E+ + GK P + N E VV++ T F L R +
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSE----------VVEDISTG--FRLYKPRLAS-----T 231
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ Q+ +C + P++RP+ + + Q+ EI S L
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 266
>pdb|2ZM1|A Chain A, Crystal Structure Of Imidazo Pyrazin 1 Bound To The Kinase
Domain Of Human Lck, (Auto-Phosphorylated On Tyr394)
pdb|2ZM4|A Chain A, Crystal Structure Of Imidazo Quinoxaline 1 Bound To The
Kinase Domain Of Human Lck, Activated Form (Auto-
Phosphorylated On Tyr394)
pdb|2ZYB|A Chain A, Crystal Structure Of Phenylimidazo Pyrazin 2 Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC1|A Chain A, Crystal Structure Of Pyrazin Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AC2|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC3|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC4|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC5|A Chain A, Crystal Structure Of Triazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AC8|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACJ|A Chain A, Crystal Structure Of Imidazo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3ACK|A Chain A, Crystal Structure Of Pyrrolo Pyrazine Derivative Bound To
The Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD4|A Chain A, Crystal Structure Of Methoxy Benzofuran Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
pdb|3AD5|A Chain A, Crystal Structure Of Triazolone Derivative Bound To The
Kinase Domain Of Human Lck, (Auto-Phosphorylated On
Tyr394)
pdb|3AD6|A Chain A, Crystal Structure Of Pyrazolo Pyrimidine Derivative Bound
To The Kinase Domain Of Human Lck, (Auto-Phosphorylated
On Tyr394)
Length = 285
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 82
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 137
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 243
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
E+ QL++L C + P++RP+ + S +E+ ++ Q Q
Sbjct: 244 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 284
>pdb|3KXZ|A Chain A, The Complex Crystal Structure Of Lck With A Probe Molecule
W259
Length = 287
Score = 90.1 bits (222), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 26 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 84
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 85 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 139
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 140 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 199
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 200 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 245
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
E+ QL++L C + P++RP+ + S +E+ ++ Q Q
Sbjct: 246 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 286
>pdb|1SM2|A Chain A, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SM2|B Chain B, Crystal Structure Of The Phosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|A Chain A, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNU|B Chain B, Crystal Structure Of The Unphosphorylated Interleukin-2
Tyrosine Kinase Catalytic Domain
pdb|1SNX|A Chain A, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
pdb|1SNX|B Chain B, Crystal Structure Of Apo Interleukin-2 Tyrosine Kinase
Catalytic Domain
Length = 264
Score = 90.1 bits (222), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
+G G FG + VA+K +++ +SE++F E+ EV+ + H LV L +
Sbjct: 13 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 72
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
LV ++M G LS L RG ET G+ L +AYL H +
Sbjct: 73 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE--ACVIHRD 126
Query: 445 IKSSNILLSKSYEARISDFGLAHLA----SPSSTPNRID-GYRAPEVTDARKVSQKADVY 499
+ + N L+ ++ ++SDFG+ SST + + +PEV + S K+DV+
Sbjct: 127 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 186
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFGVL+ E+ + GK P + N E VV++ T F L R +
Sbjct: 187 SFGVLMWEVFSEGKIPYENRSNSE----------VVEDISTG--FRLYKPRLAS-----T 229
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ Q+ +C + P++RP+ + + Q+ EI S L
Sbjct: 230 HVYQIMNHCWKERPEDRPAFSRLLRQLAEIAESGL 264
>pdb|1YI6|A Chain A, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
pdb|1YI6|B Chain B, C-Term Tail Segment Of Human Tyrosine Kinase (258-533)
Length = 276
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 16 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 74
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 75 EPIXIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 128
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 129 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 188
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 189 WSFGILLTELTTKGRVPYPGMVNREVLD 216
>pdb|1AD5|A Chain A, Src Family Kinase Hck-Amp-Pnp Complex
pdb|1AD5|B Chain B, Src Family Kinase Hck-Amp-Pnp Complex
pdb|2HCK|A Chain A, Src Family Kinase Hck-Quercetin Complex
pdb|2HCK|B Chain B, Src Family Kinase Hck-Quercetin Complex
Length = 438
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 132/274 (48%), Gaps = 29/274 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG + AT VAVK +K ++S + F + V+ ++ H+ LV L A ++
Sbjct: 190 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 248
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
+ ++ ++M GSL L + G+ + PL + + +A++ + H +
Sbjct: 249 EPIYIITEFMAKGSLLDFLKSDEGS-KQPL--PKLIDFSAQIAEGMAFIEQRN--YIHRD 303
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVL 504
++++NIL+S S +I+DFGLA + + + APE + + K+DV+SFG+L
Sbjct: 304 LRAANILVSASLVCKIADFGLARVGAKFPI-----KWTAPEAINFGSFTIKSDVWSFGIL 358
Query: 505 LLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQL 563
L+E++T G+ P + N E + A + R +N EE+ ++
Sbjct: 359 LMEIVTYGRIPYPGMSNPEVI--------------RALERGYRMPRPENCPEELYNIM-- 402
Query: 564 AINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
+ C P+ RP+ + S +++ ++ Q Q
Sbjct: 403 -MRCWKNRPEERPTFEYIQSVLDDFYTATESQXQ 435
>pdb|3LCK|A Chain A, The Kinase Domain Of Human Lymphocyte Kinase (Lck),
Activated Form (Auto-Phosphorylated On Tyr394)
pdb|3BYO|A Chain A, X-Ray Co-Crystal Structure Of 2-Amino-6-Phenylpyrimido[5',
4':5,6]pyrimido[1,2-A]benzimidazol-5(6h)-One 25 Bound To
Lck
Length = 271
Score = 89.7 bits (221), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 131
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 237
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3T9T|A Chain A, Crystal Structure Of Btk Mutant (F435t,K596r) Complexed
With Imidazo[1,5-A]quinoxaline
Length = 267
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/276 (26%), Positives = 122/276 (44%), Gaps = 31/276 (11%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
+G G FG + VA+K +++ +SE++F E+ EV+ + H LV L +
Sbjct: 16 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 75
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
LV ++M G LS L RG ET G+ L +AYL H +
Sbjct: 76 APICLVTEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEE--ACVIHRD 129
Query: 445 IKSSNILLSKSYEARISDFGLAHLA----SPSSTPNRID-GYRAPEVTDARKVSQKADVY 499
+ + N L+ ++ ++SDFG+ SST + + +PEV + S K+DV+
Sbjct: 130 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 189
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL-LRYQNVEEEM 557
SFGVL+ E+ + GK P + N E V+ D+ R
Sbjct: 190 SFGVLMWEVFSEGKIPYENRSNSEVVE------------------DISTGFRLYKPRLAS 231
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ Q+ +C + P++RP+ + + Q+ EI S L
Sbjct: 232 THVYQIMNHCWRERPEDRPAFSRLLRQLAEIAESGL 267
>pdb|2PL0|A Chain A, Lck Bound To Imatinib
Length = 289
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 135/284 (47%), Gaps = 29/284 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 28 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 86
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 87 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 141
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 142 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 201
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 202 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 247
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
E+ QL++L C + P++RP+ + S +E+ ++ Q Q
Sbjct: 248 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 288
>pdb|2OFU|A Chain A, X-Ray Crystal Structure Of 2-Aminopyrimidine Carbamate 43
Bound To Lck
Length = 273
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 20 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 78
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 79 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 133
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 134 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 193
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 194 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 239
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 240 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 269
>pdb|1OGQ|A Chain A, The Crystal Structure Of Pgip (Polygalacturonase
Inhibiting Protein), A Leucine Rich Repeat Protein
Involved In Plant Defense
Length = 313
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 67/191 (35%), Positives = 95/191 (49%), Gaps = 13/191 (6%)
Query: 4 DRAALLTLRKAIGGRTLL--WNLTDGPCK--WVGVFCTGE----RVTMLRFPGMGLSGQL 55
D+ ALL ++K +G T L W T C W+GV C + RV L G+ L
Sbjct: 7 DKQALLQIKKDLGNPTTLSSWLPTTDCCNRTWLGVLCDTDTQTYRVNNLDLSGLNLPKPY 66
Query: 56 PI--AIGNLTELHTVSLR-FNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGN 112
PI ++ NL L+ + + N L G IP AKL+ L LY+ SG IP L +
Sbjct: 67 PIPSSLANLPYLNFLYIGGINNLVGPIPPAIAKLTQLHYLYITHTNVSGAIPDFLSQIKT 126
Query: 113 LIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPD-LGAFSSL-AQFNVSFNKL 170
L+ L+ + N SGT+ + L L + N+++G+IPD G+FS L +S N+L
Sbjct: 127 LVTLDFSYNALSGTLPPSISSLPNLVGITFDGNRISGAIPDSYGSFSKLFTSMTISRNRL 186
Query: 171 NGSIPKRFARL 181
G IP FA L
Sbjct: 187 TGKIPPTFANL 197
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/181 (28%), Positives = 78/181 (43%), Gaps = 47/181 (25%)
Query: 44 LRFPGMGLSGQLPIAIGNLTELHT-VSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGE 102
+ F G +SG +P + G+ ++L T +++ N L G IP FA L NL + L N+ G+
Sbjct: 154 ITFDGNRISGAIPDSYGSFSKLFTSMTISRNRLTGKIPPTFANL-NLAFVDLSRNMLEGD 212
Query: 103 IPGLLFSLGNLIRLNLAKNNFS-----------------------GTISADFNKLTRLGT 139
L S N +++LAKN+ + GT+ +L L +
Sbjct: 213 ASVLFGSDKNTQKIHLAKNSLAFDLGKVGLSKNLNGLDLRNNRIYGTLPQGLTQLKFLHS 272
Query: 140 LYLQENQLTGSIPDLGAFSSLAQFNVSFNKLNGSIPKRFARLPSSAFEGN-SLCGKPLVS 198
L + N L G IP G +L +F+V SA+ N LCG PL +
Sbjct: 273 LNVSFNNLCGEIPQGG---NLQRFDV------------------SAYANNKCLCGSPLPA 311
Query: 199 C 199
C
Sbjct: 312 C 312
>pdb|3BYM|A Chain A, X-Ray Co-Crystal Structure Aminobenzimidazole Triazine 1
Bound To Lck
Length = 272
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 19 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 77
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 78 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 132
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 133 HRDLRAANILVSDTLSCKIADFGLARLIEDNEXTAREGAKFPIKWTAPEAINYGTFTIKS 192
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 193 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 238
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 239 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 268
>pdb|1FMK|A Chain A, Crystal Structure Of Human Tyrosine-Protein Kinase C-Src
pdb|2SRC|A Chain A, Crystal Structure Of Human Tyrosine-protein Kinase C-src,
In Complex With Amp-pnp
Length = 452
Score = 89.4 bits (220), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG----MAYVERMNYV--HR 304
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
+SFG+LL EL T G+ P ++N E +D + R + E + DL
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL----------- 413
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
M Q C + P+ RP+ + + +E+ S+ Q Q
Sbjct: 414 MCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 447
>pdb|1YOJ|A Chain A, Crystal Structure Of Src Kinase Domain
pdb|1YOJ|B Chain B, Crystal Structure Of Src Kinase Domain
pdb|1YOM|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
pdb|1YOM|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Purvalanol A
Length = 283
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG----MAYVERMN--YVHR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEWTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|2BDF|A Chain A, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDF|B Chain B, Src Kinase In Complex With Inhibitor Ap23451
pdb|2BDJ|A Chain A, Src Kinase In Complex With Inhibitor Ap23464
Length = 279
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 19 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 77
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 78 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 131
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 132 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 191
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 192 WSFGILLTELTTKGRVPYPGMVNREVLD 219
>pdb|1KSW|A Chain A, Structure Of Human C-Src Tyrosine Kinase (Thr338gly
Mutant) In Complex With N6-Benzyl Adp
Length = 452
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 251 EPIYIVGEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG----MAYVERMNYV--HR 304
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
+SFG+LL EL T G+ P ++N E +D + R + E + DL
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL----------- 413
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
M Q C + P+ RP+ + + +E+ S+ Q Q
Sbjct: 414 MCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 447
>pdb|3SVV|A Chain A, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
pdb|3SVV|B Chain B, Crystal Structure Of T338c C-Src Covalently Bound To
Vinylsulfonamide- Pyrazolopyrimidine 9
Length = 286
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVCEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3U4W|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc4b
pdb|3U51|A Chain A, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
pdb|3U51|B Chain B, Src In Complex With Dna-Templated Macrocyclic Inhibitor
Mc1
Length = 275
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 15 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 73
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 74 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 127
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 128 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 187
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 188 WSFGILLTELTTKGRVPYPGMVNREVLD 215
>pdb|3D7U|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|D Chain D, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 277
Score = 89.4 bits (220), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 17 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 75
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 76 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 129
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 130 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 189
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 190 WSFGILLTELTTKGRVPYPGMVNREVLD 217
>pdb|1YOL|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
pdb|1YOL|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Cgp77675
Length = 283
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 23 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 81
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 82 EPIYIVTEYMNKGSLLDFLKGETGKYLRLPQLVDMSAQIASG----MAYVERMN--YVHR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 136 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 196 WSFGILLTELTTKGRVPYPGMVNREVLD 223
>pdb|2OIQ|A Chain A, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|2OIQ|B Chain B, Crystal Structure Of Chicken C-Src Kinase Domain In
Complex With The Cancer Drug Imatinib.
pdb|3D7T|B Chain B, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3DQX|A Chain A, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3DQX|B Chain B, Chicken C-Src Kinase Domain In Complex With Atpgs
pdb|3EN4|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN4|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp121, A Multitargeted
Kinase Inhibitor
pdb|3EN5|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN5|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp494, A Multitargeted
Kinase Inhibitor
pdb|3EN6|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN6|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With Pp102, A Multitargeted
Kinase Inhibitor
pdb|3EN7|A Chain A, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EN7|B Chain B, Targeted Polypharmacology: Crystal Structure Of The C-Src
Kinase Domain In Complex With S1, A Multitargeted Kinase
Inhibitor
pdb|3EL7|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 3
pdb|3EL8|A Chain A, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3EL8|B Chain B, Crystal Structure Of C-Src In Complex With
Pyrazolopyrimidine 5
pdb|3F6X|A Chain A, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|B Chain B, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|C Chain C, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3F6X|D Chain D, C-Src Kinase Domain In Complex With Small Molecule
Inhibitor
pdb|3G6G|A Chain A, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|3G6G|B Chain B, Equally Potent Inhibition Of C-Src And Abl By Compounds
That Recognize Inactive Kinase Conformations
pdb|4AGW|A Chain A, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|4AGW|B Chain B, Discovery Of A Small Molecule Type Ii Inhibitor Of Wild-
Type And Gatekeeper Mutants Of Bcr-Abl, Pdgfralpha, Kit,
And Src Kinases
pdb|3UQF|A Chain A, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQF|B Chain B, C-Src Kinase Domain In Complex With Bki Rm-1-89
pdb|3UQG|A Chain A, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|3UQG|B Chain B, C-Src Kinase Domain In Complex With Bumpless Bki Analog
Uw1243
pdb|4DGG|A Chain A, C-Src Kinase Domain In Complex With Rm-1-176
pdb|4DGG|B Chain B, C-Src Kinase Domain In Complex With Rm-1-176
Length = 286
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2H8H|A Chain A, Src Kinase In Complex With A Quinazoline Inhibitor
Length = 535
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 275 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 333
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 334 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 387
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 388 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 447
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
+SFG+LL EL T G+ P ++N E +D + R + E + DL
Sbjct: 448 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL----------- 496
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
M Q C + P+ RP+ + + +E+ S+ Q Q
Sbjct: 497 MCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQXQ 530
>pdb|2OF2|A Chain A, Crystal Structure Of Furanopyrimidine 8 Bound To Lck
pdb|2OF4|A Chain A, Crystal Structure Of Furanopyrimidine 1 Bound To Lck
Length = 271
Score = 89.0 bits (219), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 18 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 76
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 77 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 131
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 237
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 267
>pdb|3DQW|A Chain A, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|B Chain B, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|C Chain C, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
pdb|3DQW|D Chain D, C-Src Kinase Domain Thr338ile Mutant In Complex With Atpgs
Length = 286
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEXTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|1Y57|A Chain A, Structure Of Unphosphorylated C-Src In Complex With An
Inhibitor
Length = 452
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 81/281 (28%), Positives = 132/281 (46%), Gaps = 33/281 (11%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 192 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 250
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 251 EPIYIVTEYMSKGSLLDFLKGETGKYLRLPQLVDMAAQIASG----MAYVERMNYV--HR 304
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 305 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 364
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
+SFG+LL EL T G+ P ++N E +D + R + E + DL
Sbjct: 365 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL----------- 413
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
M Q C + P+ RP+ + + +E+ S+ Q Q
Sbjct: 414 MCQ-------CWRKEPEERPTFEYLQAFLEDYFTSTEPQYQ 447
>pdb|2OFV|A Chain A, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|2OFV|B Chain B, Crystal Structure Of Aminoquinazoline 1 Bound To Lck
pdb|3B2W|A Chain A, Crystal Structure Of Pyrimidine Amide 11 Bound To Lck
Length = 277
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 23 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 81
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 82 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 136
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 137 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 196
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 197 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 242
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 243 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 272
>pdb|2OG8|A Chain A, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
pdb|2OG8|B Chain B, Crystal Structure Of Aminoquinazoline 36 Bound To Lck
Length = 265
Score = 89.0 bits (219), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 73/273 (26%), Positives = 129/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 13 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 71
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G L +A + +A++ +
Sbjct: 72 VTQEPIYIITEYMENGSLVDFLKTPSG---IKLTINKLLDMAAQIAEGMAFIEERN--YI 126
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 127 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 186
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 187 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 232
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 233 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 262
>pdb|3OEZ|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OEZ|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain Complexed With Imatinib
pdb|3OF0|A Chain A, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3OF0|B Chain B, Crystal Structure Of The L317i Mutant Of The Chicken C-Src
Tyrosine Kinase Domain
pdb|3QLF|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLF|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Pyrazolopyrimidine
5
pdb|3QLG|A Chain A, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
pdb|3QLG|B Chain B, Crystal Structure Of The L317i Mutant Of The C-Src
Tyrosine Kinase Domain Complexed With Dasatinib
Length = 286
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKIRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3BYS|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Amide 10b
pdb|3BYU|A Chain A, Co-Crystal Structure Of Lck And Aminopyrimidine Reverse
Amide 23
Length = 277
Score = 89.0 bits (219), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 74/273 (27%), Positives = 131/273 (47%), Gaps = 29/273 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G FG + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 24 VERLGAGQFGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYA-V 82
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 83 VTQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 137
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 138 HRDLRAANILVSDTLSCKIADFGLARLIEDNEYTAREGAKFPIKWTAPEAINYGTFTIKS 197
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 198 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 243
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
E+ QL++L C + P++RP+ + S +E+
Sbjct: 244 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDF 273
>pdb|3G6H|A Chain A, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
pdb|3G6H|B Chain B, Src Thr338ile Inhibited In The Dfg-Asp-Out Conformation
Length = 286
Score = 88.6 bits (218), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 107/208 (51%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVIEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|3C4C|A Chain A, B-Raf Kinase In Complex With Plx4720
pdb|3C4C|B Chain B, B-Raf Kinase In Complex With Plx4720
Length = 280
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 133/276 (48%), Gaps = 29/276 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 20 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 78
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ + +V + SL LH A T + +A +R + YLH+K H
Sbjct: 79 KPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTARGMDYLHAKSII--HR 132
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA + S S ++ + + APEV D+ S
Sbjct: 133 DLKSNNIFLHEDNTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 192
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + ++ V + + DL +R N
Sbjct: 193 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSLSP---DLSKVR-SNCP 243
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICR 590
+ M +L+ C + D RPS + ++IEE+ R
Sbjct: 244 KRMKRLMA---ECLKKKRDERPSFPRILAEIEELAR 276
>pdb|3GEQ|A Chain A, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
pdb|3GEQ|B Chain B, Structural Basis For The Chemical Rescue Of Src Kinase
Activity
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 67/208 (32%), Positives = 106/208 (50%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ ++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLAAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2HWO|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWO|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor
pdb|2HWP|A Chain A, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2HWP|B Chain B, Crystal Structure Of Src Kinase Domain In Complex With
Covalent Inhibitor Pd168393
pdb|2QLQ|A Chain A, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|2QLQ|B Chain B, Crystal Structure Of Src Kinase Domain With Covalent
Inhibitor Rl3
pdb|3F3T|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3T|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl38 (Type
Iii)
pdb|3F3U|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3U|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl37 (Type
Iii)
pdb|3F3V|A Chain A, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3F3V|B Chain B, Kinase Domain Of Csrc In Complex With Inhibitor Rl45 (Type
Ii)
pdb|3G5D|A Chain A, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3G5D|B Chain B, Kinase Domain Of Csrc In Complex With Dasatinib
pdb|3TZ7|A Chain A, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ7|B Chain B, Kinase Domain Of Csrc In Complex With Rl103
pdb|3TZ8|A Chain A, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ8|B Chain B, Kinase Domain Of Csrc In Complex With Rl104
pdb|3TZ9|A Chain A, Kinase Domain Of Csrc In Complex With Rl130
pdb|3TZ9|B Chain B, Kinase Domain Of Csrc In Complex With Rl130
Length = 286
Score = 88.2 bits (217), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM G L L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVTEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|2QQ7|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QQ7|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain With
Irreversible Inhibitor
pdb|2QI8|A Chain A, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|2QI8|B Chain B, Crystal Structure Of Drug Resistant Src Kinase Domain
pdb|3F3W|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3F3W|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With
Inhibitor Rl45 (Type Ii)
pdb|3LOK|A Chain A, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
pdb|3LOK|B Chain B, Drug Resistant Csrc Kinase Domain In Complex With Covalent
Inhibitor Pd168393
Length = 286
Score = 87.8 bits (216), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 66/208 (31%), Positives = 106/208 (50%), Gaps = 14/208 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK T+S + F ++ +V+ + HE LV L A S
Sbjct: 26 LGQGCFGEVWMGTWNGTTRVAIKTLKPGTMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 84
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM G L L G G R P + + +A G +AY+ H
Sbjct: 85 EPIYIVMEYMSKGCLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMN--YVHR 138
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGLA L + R + APE + + K+DV
Sbjct: 139 DLRAANILVGENLVCKVADFGLARLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 198
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD 525
+SFG+LL EL T G+ P ++N E +D
Sbjct: 199 WSFGILLTELTTKGRVPYPGMVNREVLD 226
>pdb|1QCF|A Chain A, Crystal Structure Of Hck In Complex With A Src Family-
Selective Tyrosine Kinase Inhibitor
pdb|2C0I|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0I|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-420983
pdb|2C0O|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0O|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-770041
pdb|2C0T|A Chain A, Src Family Kinase Hck With Bound Inhibitor A-641359
pdb|2C0T|B Chain B, Src Family Kinase Hck With Bound Inhibitor A-641359
Length = 454
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 69/279 (24%), Positives = 136/279 (48%), Gaps = 29/279 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG + AT VAVK +K ++S + F + V+ ++ H+ LV L A ++
Sbjct: 196 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 254
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
+ ++ ++M GSL L + G+ + PL + + +A++ + H +
Sbjct: 255 EPIYIITEFMAKGSLLDFLKSDEGS-KQPL--PKLIDFSAQIAEGMAFIEQRN--YIHRD 309
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADVY 499
++++NIL+S S +I+DFGLA + + R + APE + + K+DV+
Sbjct: 310 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 369
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFG+LL+E++T G+ P + N P ++++ + + R +N EE+
Sbjct: 370 SFGILLMEIVTYGRIPYPGMSN------PEVIRALER--------GYRMPRPENCPEELY 415
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
++ + C P+ RP+ + S +++ ++ Q +
Sbjct: 416 NIM---MRCWKNRPEERPTFEYIQSVLDDFYTATESQXE 451
>pdb|3MIY|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MIY|B Chain B, X-Ray Crystal Structure Of Itk Complexed With Sunitinib
pdb|3MJ1|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Ro5191614
pdb|3MJ2|A Chain A, X-Ray Crystal Structure Of Itk Complexed With Inhibitor
Bms-509744
Length = 266
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 122/275 (44%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
+G G FG + VA+K +++ +SE++F E+ EV+ + H LV L +
Sbjct: 15 IGSGQFGLVHLGYWLNKDKVAIKTIREGAMSEEDFIEEAEVMMKLSHPKLVQLYGVCLEQ 74
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
LV ++M G LS L RG ET G+ L +AYL H +
Sbjct: 75 APICLVFEFMEHGCLSDYLRTQRGLFAA----ETLLGMCLDVCEGMAYLEEASVI--HRD 128
Query: 445 IKSSNILLSKSYEARISDFGLAHLA----SPSSTPNRID-GYRAPEVTDARKVSQKADVY 499
+ + N L+ ++ ++SDFG+ SST + + +PEV + S K+DV+
Sbjct: 129 LAARNCLVGENQVIKVSDFGMTRFVLDDQYTSSTGTKFPVKWASPEVFSFSRYSSKSDVW 188
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFGVL+ E+ + GK P + N E VV++ T R
Sbjct: 189 SFGVLMWEVFSEGKIPYENRSNSE----------VVEDISTG-------FRLYKPRLAST 231
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ Q+ +C + P++RP+ + + Q+ I S L
Sbjct: 232 HVYQIMNHCWKERPEDRPAFSRLLRQLAAIAASGL 266
>pdb|3OMV|A Chain A, Crystal Structure Of C-Raf (Raf-1)
pdb|3OMV|B Chain B, Crystal Structure Of C-Raf (Raf-1)
Length = 307
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 129/272 (47%), Gaps = 29/272 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + ++ D T + + FR ++ V+ H N++ L Y +
Sbjct: 44 IGSGSFGTVYKGKWHGDVAVKILKVVDPTPEQFQAFRNEVAVLRKTRHVNIL-LFMGYMT 102
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+D +V + SL LH T +A ++ + YLH+K H
Sbjct: 103 KDNLAIVTQWCEGSSLYKHLH----VQETKFQMFQLIDIARQTAQGMDYLHAKNII--HR 156
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA + S S +++ + APEV D S
Sbjct: 157 DMKSNNIFLHEGLTVKIGDFGLATVKSRWSGSQQVEQPTGSVLWMAPEVIRMQDNNPFSF 216
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVYS+G++L EL+TG+ P + N + + +V + + DL L Y+N
Sbjct: 217 QSDVYSYGIVLYELMTGELPYSHINNRDQIIF------MVGRGYASP--DLSKL-YKNCP 267
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ M +L+ +C + + RP ++ S IE
Sbjct: 268 KAMKRLVA---DCVKKVKEERPLFPQILSSIE 296
>pdb|4FK3|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
pdb|4FK3|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx3203
Length = 292
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 76/276 (27%), Positives = 132/276 (47%), Gaps = 29/276 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 32 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 90
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ + +V + SL LH A T + +A +R + YLH+K H
Sbjct: 91 KPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDIARQTARGMDYLHAKSII--HR 144
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA S S ++ + + APEV D+ S
Sbjct: 145 DLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDSNPYSF 204
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + ++ V + + DL +R N
Sbjct: 205 QSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMVGRGSLSP---DLSKVR-SNCP 255
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICR 590
+ M +L+ C + D RPS + ++IEE+ R
Sbjct: 256 KRMKRLM---AECLKKKRDERPSFPRILAEIEELAR 288
>pdb|2HK5|A Chain A, Hck Kinase In Complex With Lck Targetted Inhibitor Pg-
1009247
Length = 270
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 69/270 (25%), Positives = 129/270 (47%), Gaps = 29/270 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG + AT VAVK +K ++S + F + V+ ++ H+ LV L A ++
Sbjct: 23 LGAGQFGEVWMATYNKHTKVAVKTMKPGSMSVEAFLAEANVMKTLQHDKLVKLHA-VVTK 81
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
+ ++ ++M GSL L + G+ + PL + + +A++ + H +
Sbjct: 82 EPIYIITEFMAKGSLLDFLKSDEGS-KQPL--PKLIDFSAQIAEGMAFIEQRN--YIHRD 136
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADVY 499
++++NIL+S S +I+DFGLA + + R + APE + + K+DV+
Sbjct: 137 LRAANILVSASLVCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGSFTIKSDVW 196
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFG+LL+E++T G+ P + N E + A + R +N EE+
Sbjct: 197 SFGILLMEIVTYGRIPYPGMSNPEVI--------------RALERGYRMPRPENCPEELY 242
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
++ + C P+ RP+ + S +++
Sbjct: 243 NIM---MRCWKNRPEERPTFEYIQSVLDDF 269
>pdb|1QPD|A Chain A, Structural Analysis Of The Lymphocyte-specific Kinase Lck
In Complex With Non-selective And Src Family Selective
Kinase Inhibitors
Length = 279
Score = 86.7 bits (213), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 75/284 (26%), Positives = 134/284 (47%), Gaps = 29/284 (10%)
Query: 322 AEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG G G + VAVK LK ++S F + ++ + H+ LV L A
Sbjct: 18 VERLGAGQAGEVWMGYYNGHTKVAVKSLKQGSMSPDAFLAEANLMKQLQHQRLVRLYAVV 77
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+++ ++ +YM GSL L G T +N +A + +A++ +
Sbjct: 78 -TQEPIYIITEYMENGSLVDFLKTPSGIKLT-IN--KLLDMAAQIAEGMAFIEERN--YI 131
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKA 496
H +++++NIL+S + +I+DFGLA L + R + APE + + K+
Sbjct: 132 HRDLRAANILVSDTLSCKIADFGLARLIEDAEXTAREGAKFPIKWTAPEAINYGTFTIKS 191
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
DV+SFG+LL E++T G+ P + N P +Q++ + ++R N E
Sbjct: 192 DVWSFGILLTEIVTHGRIPYPGMTN------PEVIQNLER--------GYRMVRPDNCPE 237
Query: 556 EMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
E+ QL++L C + P++RP+ + S +E+ ++ Q Q
Sbjct: 238 ELYQLMRL---CWKERPEDRPTFDYLRSVLEDFFTATEGQYQPQ 278
>pdb|2FO0|A Chain A, Organization Of The Sh3-Sh2 Unit In Active And Inactive
Forms Of The C-Abl Tyrosine Kinase
Length = 495
Score = 86.3 bits (212), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 225 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 284
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 285 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI--HR 339
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
N+ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 340 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 399
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 400 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 445
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 446 YELMRA---CWQWNPSDRPSFAEIHQAFETMFQES 477
>pdb|1OPL|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPL|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 537
Score = 85.9 bits (211), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 76/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 267 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 326
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 327 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI--HR 381
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
N+ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 382 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 441
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 442 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 487
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 488 YELMRA---CWQWNPSDRPSFAEIHQAFETMFQES 519
>pdb|2PTK|A Chain A, Chicken Src Tyrosine Kinase
Length = 453
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 79/281 (28%), Positives = 130/281 (46%), Gaps = 33/281 (11%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG+G FG + T VA+K LK +S + F ++ +V+ + HE LV L A S
Sbjct: 193 LGQGCFGEVWMGTWNGTTRVAIKTLKPGNMSPEAFLQEAQVMKKLRHEKLVQLYA-VVSE 251
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V +YM GSL L G G R P + + +A G +AY+ H
Sbjct: 252 EPIYIVTEYMSKGSLLDFLKGEMGKYLRLPQLVDMAAQIASG----MAYVERMNYV--HR 305
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
+++++NIL+ ++ +++DFGL L + R + APE + + K+DV
Sbjct: 306 DLRAANILVGENLVCKVADFGLGRLIEDNEYTARQGAKFPIKWTAPEAALYGRFTIKSDV 365
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
+SFG+LL EL T G+ P ++N E +D + R + E + DL
Sbjct: 366 WSFGILLTELTTKGRVPYPGMVNREVLDQVERGYRMPCPPECPESLHDL----------- 414
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQ 597
M Q C + P+ RP+ + + +E+ S+ Q Q
Sbjct: 415 MCQ-------CWRKDPEERPTFEYLQAFLEDYFTSTEPQXQ 448
>pdb|2XRU|A Chain A, Aurora-A T288e Complexed With Pha-828300
Length = 280
Score = 85.9 bits (211), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
G R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 114 ITELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTELCGTL 170
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3E5A|A Chain A, Crystal Structure Of Aurora A In Complex With Vx-680 And
Tpx2
Length = 268
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
G R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 1 GKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 114 ITELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTXLCGTL 170
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3R21|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|3R22|A Chain A, Design, Synthesis, And Biological Evaluation Of
Pyrazolopyridine- Sulfonamides As Potent
Multiple-Mitotic Kinase (Mmk) Inhibitors (Part I)
pdb|4DHF|A Chain A, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
pdb|4DHF|B Chain B, Structure Of Aurora A Mutant Bound To Biogenidec Cpd 15
Length = 271
Score = 85.5 bits (210), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 107/218 (49%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
G R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 4 GSRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 116
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + + G
Sbjct: 117 ITELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTL 173
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2J50|A Chain A, Structure Of Aurora-2 In Complex With Pha-739358
pdb|2J50|B Chain B, Structure Of Aurora-2 In Complex With Pha-739358
Length = 280
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
G R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 1 GPRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 114 ITELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTL 170
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3HA6|A Chain A, Crystal Structure Of Aurora A In Complex With Tpx2 And
Compound 10
Length = 268
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
G R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 1 GKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 114 ITELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTL 170
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3PYY|A Chain A, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
pdb|3PYY|B Chain B, Discovery And Characterization Of A Cell-Permeable,
Small-Molecule C- Abl Kinase Activator That Binds To The
Myristoyl Binding Site
Length = 298
Score = 85.1 bits (209), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 81/302 (26%), Positives = 139/302 (46%), Gaps = 34/302 (11%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSE 356
NL F +G +D ++ R + LG G +G Y+ + + VAVK LK+ T+
Sbjct: 9 NLYF--QGSPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEV 66
Query: 357 KEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNW 416
+EF ++ V+ + H NLV L ++ ++M G+L L R R +N
Sbjct: 67 EEFLKEAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNA 123
Query: 417 ETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN 476
+A S A+ YL K H ++ + N L+ +++ +++DFGL+ L + +
Sbjct: 124 VVLLYMATQISSAMEYLEKKNFI--HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTA 181
Query: 477 RIDG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWV 530
+ APE K S K+DV++FGVLL E+ T G +P G+DL +
Sbjct: 182 HAGAKFPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQVY 235
Query: 531 QSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICR 590
+ + K D + R + E++ +L++ C P +RPS AE+ E + +
Sbjct: 236 ELLEK--------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQ 284
Query: 591 SS 592
S
Sbjct: 285 ES 286
>pdb|3OG7|A Chain A, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
pdb|3OG7|B Chain B, B-Raf Kinase V600e Oncogenic Mutant In Complex With
Plx4032
Length = 289
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 82/297 (27%), Positives = 138/297 (46%), Gaps = 31/297 (10%)
Query: 306 GKGDRAFDLE--DLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREK 362
G D A D E D + +G G+FGT YK + V + + T + + F+ +
Sbjct: 11 GSRDAADDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNE 70
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+ V+ H N++ L Y + + +V + SL LH A T + +
Sbjct: 71 VGVLRKTRHVNIL-LFMGYSTAPQLAIVTQWCEGSSLYHHLH----ASETKFEMKKLIDI 125
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
A +R + YLH+K H ++KS+NI L + +I DFGLA S S ++ +
Sbjct: 126 ARQTARGMDYLHAKSII--HRDLKSNNIFLHEDNTVKIGDFGLATEKSRWSGSHQFEQLS 183
Query: 481 ----YRAPEVT---DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSV 533
+ APEV D+ S ++DVY+FG++L EL+TG+ P + N + + ++ V
Sbjct: 184 GSILWMAPEVIRMQDSNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQI-----IEMV 238
Query: 534 VKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICR 590
+ + DL +R N + M +L+ C + D RPS + ++IEE+ R
Sbjct: 239 GRGSLSP---DLSKVR-SNCPKRMKRLMA---ECLKKKRDERPSFPRILAEIEELAR 288
>pdb|3A4O|X Chain X, Lyn Kinase Domain
Length = 286
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/281 (25%), Positives = 130/281 (46%), Gaps = 28/281 (9%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG + VAVK LK T+S + F E+ ++ ++ H+ LV L A
Sbjct: 21 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTRE 80
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
+ ++ +YM GSL L + G G+ L + + +AY+ K H +
Sbjct: 81 EPIYIITEYMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERKN--YIHRD 135
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADVY 499
++++N+L+S+S +I+DFGLA + + R + APE + + K+DV+
Sbjct: 136 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSDVW 195
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFG+LL E++T GK P N + + TA + R +N +E+
Sbjct: 196 SFGILLYEIVTYGKIPYPGRTNADVM--------------TALSQGYRMPRVENCPDELY 241
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
++++ C + + RP+ + S +++ ++ Q Q
Sbjct: 242 DIMKM---CWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQ 279
>pdb|2G2F|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2F|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2H|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G2I|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 31/276 (11%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 137
Query: 444 NIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRIDGYRAPEVTDARKVSQKAD 497
++ + N L+ +++ +++DFGL+ L +P+ I + APE K S K+D
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-WTAPESLAYNKFSIKSD 196
Query: 498 VYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
V++FGVLL E+ T G +P G+DL + + + K D + R + E+
Sbjct: 197 VWAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEK 242
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+ +L++ C P +RPS AE+ E + + S
Sbjct: 243 VYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2F4J|A Chain A, Structure Of The Kinase Domain Of An Imatinib-Resistant
Abl Mutant In Complex With The Aurora Kinase Inhibitor
Vx-680
Length = 287
Score = 85.1 bits (209), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 77/276 (27%), Positives = 130/276 (47%), Gaps = 31/276 (11%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 82 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 136
Query: 444 NIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRIDGYRAPEVTDARKVSQKAD 497
++ + N L+ +++ +++DFGL+ L +P+ I + APE K S K+D
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAPAGAKFPIK-WTAPESLAYNKFSIKSD 195
Query: 498 VYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
V++FGVLL E+ T G +P G+DL + + + K D + R + E+
Sbjct: 196 VWAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEK 241
Query: 557 MVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+ +L++ C P +RPS AE+ E + + S
Sbjct: 242 VYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|2GQG|A Chain A, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
pdb|2GQG|B Chain B, X-Ray Crystal Structure Of Dasatinib (Bms-354825) Bound To
Activated Abl Kinase Domain
Length = 278
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 140
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 201 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 246
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 247 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|3NRM|A Chain A, Imidazo[1,2-A]pyrazine-Based Aurora Kinase Inhibitors
Length = 283
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 64/218 (29%), Positives = 106/218 (48%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
G R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 4 GSRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 61
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 62 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 116
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 117 ITELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTL 173
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 174 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2HIW|A Chain A, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
pdb|2HIW|B Chain B, Crystal Structure Of Inactive Conformation Abl Kinase
Catalytic Domain Complexed With Type Ii Inhibitor
Length = 287
Score = 84.7 bits (208), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 136/297 (45%), Gaps = 32/297 (10%)
Query: 306 GKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFRE 361
G D +D ++ R + LG G +G Y+ + + VAVK LK+ T+ +EF +
Sbjct: 1 GAMDPNYDKWEMERTDITMKHKLGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLK 60
Query: 362 KMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG 421
+ V+ + H NLV L ++ ++M G+L L R R +N
Sbjct: 61 EAAVMKEIKHPNLVQLLGVCTREPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLY 117
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG- 480
+A S A+ YL K H ++ + N L+ +++ +++DFGL+ L + +
Sbjct: 118 MATQISSAMEYLEKKNFI--HRDLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAK 175
Query: 481 ----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
+ APE K S K+DV++FGVLL E+ T G +P G+DL + + + K
Sbjct: 176 FPIKWTAPESLAYNKFSIKSDVWAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK 229
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
D + R + E++ +L++ C P +RPS AE+ E + + S
Sbjct: 230 --------DYRMERPEGCPEKVYELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2HZI|A Chain A, Abl Kinase Domain In Complex With Pd180970
pdb|2HZI|B Chain B, Abl Kinase Domain In Complex With Pd180970
pdb|3CS9|A Chain A, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|B Chain B, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|C Chain C, Human Abl Kinase In Complex With Nilotinib
pdb|3CS9|D Chain D, Human Abl Kinase In Complex With Nilotinib
Length = 277
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 25 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 84
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 85 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 139
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 140 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 199
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 200 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 245
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 246 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 277
>pdb|2G1T|A Chain A, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|B Chain B, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|C Chain C, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|2G1T|D Chain D, A Src-Like Inactive Conformation In The Abl Tyrosine
Kinase Domain
pdb|3UE4|A Chain A, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
pdb|3UE4|B Chain B, Structural And Spectroscopic Analysis Of The Kinase
Inhibitor Bosutinib Binding To The Abl Tyrosine Kinase
Domain
Length = 287
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 23 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 82
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 83 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKNFI--HR 137
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 138 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 197
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 198 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 243
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 244 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 275
>pdb|2HYY|A Chain A, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|B Chain B, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|C Chain C, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HYY|D Chain D, Human Abl Kinase Domain In Complex With Imatinib (Sti571,
Glivec)
pdb|2HZ4|A Chain A, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|B Chain B, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
pdb|2HZ4|C Chain C, Abl Kinase Domain Unligated And In Complex With
Tetrahydrostaurosporine
Length = 273
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 196 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 241
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 242 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2E2B|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
pdb|2E2B|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Inno-406
Length = 293
Score = 84.3 bits (207), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 140
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 201 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 246
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 247 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2V7A|A Chain A, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
pdb|2V7A|B Chain B, Crystal Structure Of The T315i Abl Mutant In Complex With
The Inhibitor Pha-739358
Length = 286
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 22 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 81
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 82 EPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 136
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 137 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 196
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 197 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 242
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 243 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 274
>pdb|3UNZ|A Chain A, Aurora A In Complex With Rpm1679
pdb|3UNZ|B Chain B, Aurora A In Complex With Rpm1679
pdb|3UO4|A Chain A, Aurora A In Complex With Rpm1680
pdb|3UO5|A Chain A, Aurora A In Complex With Yl1-038-31
pdb|3UO6|A Chain A, Aurora A In Complex With Yl5-083
pdb|3UO6|B Chain B, Aurora A In Complex With Yl5-083
pdb|3UOD|A Chain A, Aurora A In Complex With Rpm1693
pdb|3UOH|A Chain A, Aurora A In Complex With Rpm1722
pdb|3UOH|B Chain B, Aurora A In Complex With Rpm1722
pdb|3UOJ|A Chain A, Aurora A In Complex With Rpm1715
pdb|3UOJ|B Chain B, Aurora A In Complex With Rpm1715
pdb|3UOK|A Chain A, Aurora A In Complex With Yl5-81-1
pdb|3UOK|B Chain B, Aurora A In Complex With Yl5-81-1
pdb|3UOL|A Chain A, Aurora A In Complex With So2-162
pdb|3UOL|B Chain B, Aurora A In Complex With So2-162
pdb|3UP2|A Chain A, Aurora A In Complex With Rpm1686
pdb|3UP7|A Chain A, Aurora A In Complex With Yl1-038-09
pdb|4DEA|A Chain A, Aurora A In Complex With Yl1-038-18
pdb|4DEB|A Chain A, Aurora A In Complex With Rk2-17-01
pdb|4DED|A Chain A, Aurora A In Complex With Yl1-038-21
pdb|4DEE|A Chain A, Aurora A In Complex With Adp
Length = 279
Score = 84.0 bits (206), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 4 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 116
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + + G Y
Sbjct: 117 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDTLCGTLDY 173
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|1OPK|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
Length = 495
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 228 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 287
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 288 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI--HR 342
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
N+ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 343 NLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 402
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 403 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 448
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 449 YELMRA---CWQWNPSDRPSFAEIHQAFETMFQES 480
>pdb|2C6D|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With
Adpnp
Length = 275
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 3 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 115
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 116 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2BMC|A Chain A, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|B Chain B, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|C Chain C, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|D Chain D, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|E Chain E, Aurora-2 T287d T288d Complexed With Pha-680632
pdb|2BMC|F Chain F, Aurora-2 T287d T288d Complexed With Pha-680632
Length = 306
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 106/216 (49%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 29 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 141
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + + G Y
Sbjct: 142 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRDDLCGTLDY 198
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|2XNG|A Chain A, Structure Of Aurora-A Bound To A Selective Imidazopyrazine
Inhibitor
Length = 283
Score = 83.6 bits (205), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 6 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 118
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 119 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 175
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2HZ0|A Chain A, Abl Kinase Domain In Complex With Nvp-Aeg082
pdb|2HZ0|B Chain B, Abl Kinase Domain In Complex With Nvp-Aeg082
Length = 270
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 29/269 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 196 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 241
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+L++ C P +RPS AE+ E
Sbjct: 242 YELMR---ACWQWNPSDRPSFAEIHQAFE 267
>pdb|1OL5|A Chain A, Structure Of Aurora-A 122-403, Phosphorylated On Thr287,
Thr288 And Bound To Tpx2 1-43
pdb|1OL7|A Chain A, Structure Of Human Aurora-A 122-403 Phosphorylated On
Thr287, Thr288
Length = 282
Score = 83.2 bits (204), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 5 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 117
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 118 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDY 174
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3LAU|A Chain A, Crystal Structure Of Aurora2 Kinase In Complex With A
Gsk3beta Inhibitor
Length = 287
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 3 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 60
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 61 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 115
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 116 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 172
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 173 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|3QBN|A Chain A, Structure Of Human Aurora A In Complex With A
Diaminopyrimidine
Length = 281
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 4 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 116
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + +PSS + G Y
Sbjct: 117 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-CHAPSSRRTTLSGTLDY 173
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|1MUO|A Chain A, Crystal Structure Of Aurora-2, An Oncogenic Serine-
Threonine Kinase
Length = 297
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 20 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 77
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 78 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 132
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 133 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 189
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 190 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 225
>pdb|2X6D|A Chain A, Aurora-A Bound To An Inhibitor
pdb|2X6E|A Chain A, Aurora-A Bound To An Inhibitor
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 8 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 120
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 121 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3FDN|A Chain A, Structure-Based Drug Design Of Novel Aurora Kinase A
Inhibitors: Structure Basis For Potency And Specificity
pdb|3K5U|A Chain A, Identification, Sar Studies And X-Ray Cocrystal Analysis
Of A Novel Furano-Pyrimidine Aurora Kinase A Inhibitor
pdb|3M11|A Chain A, Crystal Structure Of Aurora A Kinase Complexed With
Inhibitor
Length = 279
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 4 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 61
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 62 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 116
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 117 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 173
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 174 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 209
>pdb|2C6E|A Chain A, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
pdb|2C6E|B Chain B, Aurora A Kinase Activated Mutant (T287d) In Complex With A
5-Aminopyrimidinyl Quinazoline Inhibitor
Length = 283
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 8 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 120
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 121 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTDLCGTLDY 177
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3O50|A Chain A, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O50|B Chain B, Crystal Structure Of Benzamide 9 Bound To Auroraa
pdb|3O51|A Chain A, Crystal Structure Of Anthranilamide 10 Bound To Auroraa
pdb|3EFW|A Chain A, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
pdb|3EFW|B Chain B, Structure Of Auroraa With Pyridyl-Pyrimidine Urea
Inhibitor
Length = 267
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 2 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 59
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 60 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 114
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 115 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 171
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 172 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 207
>pdb|3QRI|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRI|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dcc- 2036
pdb|3QRK|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain In
Complex With Dp- 987
Length = 277
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 29/269 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 140
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 201 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 246
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+L++ C P +RPS AE+ E
Sbjct: 247 YELMR---ACWQWNPSDRPSFAEIHQAFE 272
>pdb|2W1C|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1G|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 6 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 118
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 119 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLCGTLDY 175
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|1MQ4|A Chain A, Crystal Structure Of Aurora-A Protein Kinase
pdb|2NP8|A Chain A, Structural Basis For The Inhibition Of Aurora A Kinase By
A Novel Class Of High Affinity Disubstituted Pyrimidine
Inhibitors
pdb|2X81|A Chain A, Structure Of Aurora A In Complex With Mln8054
pdb|3MYG|A Chain A, Aurora A Kinase Complexed With Sch 1473759
pdb|3VAP|A Chain A, Synthesis And Sar Studies Of Imidazo-[1,2-A]-Pyrazine
Aurora Kinase Inhibitors With Improved Off Target Kinase
Selectivity
Length = 272
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 7 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 64
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 119
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 120 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 176
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 177 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 212
>pdb|2DWB|A Chain A, Aurora-A Kinase Complexed With Amppnp
Length = 285
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 104/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 8 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 120
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 121 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE + R +K D++S GVL E L GK P +A
Sbjct: 178 LPPEXIEGRXHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|2W1D|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1E|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1F|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 275
Score = 83.2 bits (204), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 6 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 118
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 119 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 175
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|2J4Z|A Chain A, Structure Of Aurora-2 In Complex With Pha-680626
pdb|2J4Z|B Chain B, Structure Of Aurora-2 In Complex With Pha-680626
Length = 306
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 29 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 86
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 87 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 141
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 142 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 198
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 199 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 234
>pdb|3QRJ|A Chain A, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
pdb|3QRJ|B Chain B, The Crystal Structure Of Human Abl1 Kinase Domain T315i
Mutant In Complex With Dcc-2036
Length = 277
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 74/269 (27%), Positives = 125/269 (46%), Gaps = 29/269 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R +N +A S A+ YL K H
Sbjct: 86 EPPFYIIIEFMTYGNLLDYL---RECNRQEVNAVVLLYMATQISSAMEYLEKKN--FIHR 140
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 201 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 246
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+L++ C P +RPS AE+ E
Sbjct: 247 YELMR---ACWQWNPSDRPSFAEIHQAFE 272
>pdb|3DK6|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK6|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 82.8 bits (203), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 75/275 (27%), Positives = 130/275 (47%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G FG Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 19 LGGGQFGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 79 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHR 133
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+D P V ++++++ E R + E++
Sbjct: 194 WAFGVLLWEIATYGMSPYP------GID-PSQVYELLEKDYRME-------RPEGCPEKV 239
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 240 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|2WQE|A Chain A, Structure Of S155r Aurora-A Somatic Mutant
Length = 262
Score = 82.8 bits (203), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 59/201 (29%), Positives = 100/201 (49%), Gaps = 16/201 (7%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPLRA 379
LGKG FG Y A + ++A+K L + E + R ++E+ + H N++ L
Sbjct: 13 LGKGKFGNVYLAREKQRKFILALKVLFKAQLEKAGVEHQLRREVEIQSHLRHPNILRLYG 72
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y++ L+ +Y P+G++ L + + + + + A++Y HSK
Sbjct: 73 YFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYITELANALSYCHSKRVI 127
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVSQKA 496
H +IK N+LL + E +I+DFG + + +PSS + G Y PE+ + R +K
Sbjct: 128 --HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDYLPPEMIEGRMHDEKV 184
Query: 497 DVYSFGVLLLELLTGKAPTQA 517
D++S GVL E L GK P +A
Sbjct: 185 DLWSLGVLCYEFLVGKPPFEA 205
>pdb|2ZV7|A Chain A, Lyn Tyrosine Kinase Domain, Apo Form
pdb|2ZV8|A Chain A, Lyn Tyrosine Kinase Domain-Amp-Pnp Complex
pdb|2ZV9|A Chain A, Lyn Tyrosine Kinase Domain-Pp2 Complex
pdb|2ZVA|A Chain A, Lyn Tyrosine Kinase Domain-dasatinib Complex
Length = 279
Score = 82.4 bits (202), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 132/281 (46%), Gaps = 28/281 (9%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG + VAVK LK T+S + F E+ ++ ++ H+ LV L A
Sbjct: 20 LGAGQFGEVWMGYYNNSTKVAVKTLKPGTMSVQAFLEEANLMKTLQHDKLVRLYAVVTKE 79
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
+ ++ ++M GSL L + G G+ L + + +AY+ K H +
Sbjct: 80 EPIYIITEFMAKGSLLDFLKSDEG-GKVLL--PKLIDFSAQIAEGMAYIERKN--YIHRD 134
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADVY 499
++++N+L+S+S +I+DFGLA + + R + APE + + K++V+
Sbjct: 135 LRAANVLVSESLMCKIADFGLARVIEDNEYTAREGAKFPIKWTAPEAINFGCFTIKSNVW 194
Query: 500 SFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV 558
SFG+LL E++T GK P N + V S + + + + R +N +E+
Sbjct: 195 SFGILLYEIVTYGKIPYPGRTNAD-------VMSALSQGY-------RMPRMENCPDELY 240
Query: 559 QLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
++++ C + + RP+ + S +++ ++ Q Q
Sbjct: 241 DIMKM---CWKEKAEERPTFDYLQSVLDDFYTATEGQYQQQ 278
>pdb|3H0Y|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|A Chain A, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|B Chain B, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H0Z|C Chain C, Aurora A In Complex With A Bisanilinopyrimidine
pdb|3H10|A Chain A, Aurora A Inhibitor Complex
pdb|3H10|B Chain B, Aurora A Inhibitor Complex
pdb|3H10|D Chain D, Aurora A Inhibitor Complex
pdb|3P9J|A Chain A, Aurora A Kinase Domain With Phthalazinone Pyrazole
Inhibitor
Length = 268
Score = 82.4 bits (202), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 1 AKRQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 114 ITELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTL 170
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|2QOH|A Chain A, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|2QOH|B Chain B, Crystal Structure Of Abl Kinase Bound With Ppy-a
pdb|3KF4|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KF4|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|A Chain A, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
pdb|3KFA|B Chain B, Structural Analysis Of Dfg-In And Dfg-Out Dual Src-Abl
Inhibitors Sharing A Common Vinyl Purine Template
Length = 288
Score = 82.4 bits (202), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI--HR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 196 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 241
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 242 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3OXZ|A Chain A, Crystal Structure Of Abl Kinase Domain Bound With A
Dfg-Out Inhibitor Ap24534
Length = 284
Score = 82.0 bits (201), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 81 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 196 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 241
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 242 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3COH|A Chain A, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
pdb|3COH|B Chain B, Crystal Structure Of Aurora-A In Complex With A
Pentacyclic Inhibitor
Length = 268
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 105/218 (48%), Gaps = 18/218 (8%)
Query: 308 GDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREK 362
R + LED LGKG FG Y A + ++A+K L + E + R +
Sbjct: 1 AKRQWALEDF--EIGRPLGKGKFGNVYLAREKNSKFILALKVLFKAQLEKAGVEHQLRRE 58
Query: 363 MEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL 422
+E+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 59 VEIQSHLRHPNILRLYGYFHDSTRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATY 113
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 114 ITELANALSYCHSKKVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRAALCGTL 170
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
Y PE+ + R +K D++S GVL E L GK P +A
Sbjct: 171 DYLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 208
>pdb|1FPU|A Chain A, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1FPU|B Chain B, Crystal Structure Of Abl Kinase Domain In Complex With A
Small Molecule Inhibitor
pdb|1IEP|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1IEP|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Sti-571.
pdb|1M52|A Chain A, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1M52|B Chain B, Crystal Structure Of The C-Abl Kinase Domain In Complex
With Pd173955
pdb|1OPJ|A Chain A, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|1OPJ|B Chain B, Structural Basis For The Auto-Inhibition Of C-Abl Tyrosine
Kinase
pdb|2HZN|A Chain A, Abl Kinase Domain In Complex With Nvp-Afg210
pdb|3K5V|A Chain A, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3K5V|B Chain B, Structure Of Abl Kinase In Complex With Imatinib And Gnf-2
pdb|3MS9|A Chain A, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MS9|B Chain B, Abl Kinase In Complex With Imatinib And A Fragment (Frag1)
I Myristate Pocket
pdb|3MSS|A Chain A, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|B Chain B, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|C Chain C, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
pdb|3MSS|D Chain D, Abl Kinase In Complex With Imatinib And Fragment (Frag2)
In The Myristate Site
Length = 293
Score = 82.0 bits (201), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 26 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 85
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 86 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHR 140
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 141 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 200
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 201 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 246
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 247 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 278
>pdb|2WTV|A Chain A, Aurora-A Inhibitor Structure
pdb|2WTV|B Chain B, Aurora-A Inhibitor Structure
pdb|2WTV|C Chain C, Aurora-A Inhibitor Structure
pdb|2WTV|D Chain D, Aurora-A Inhibitor Structure
Length = 285
Score = 82.0 bits (201), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 8 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P G + L + + + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYIT 120
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 121 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRXXLXGTLDY 177
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|3OY3|A Chain A, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
pdb|3OY3|B Chain B, Crystal Structure Of Abl T315i Mutant Kinase Domain Bound
With A Dfg- Out Inhibitor Ap24589
Length = 284
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 196 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 241
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 242 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|2EVA|A Chain A, Structural Basis For The Interaction Of Tak1 Kinase With
Its Activating Protein Tab1
pdb|2YIY|A Chain A, Crystal Structure Of Compound 8 Bound To Tak1-Tab
Length = 307
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 46/299 (15%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
EV+G+G FG KA VA+K+++ + K F ++ + ++H N+V L Y
Sbjct: 14 EVVGRGAFGVVCKAKWR-AKDVAIKQIESES-ERKAFIVELRQLSRVNHPNIVKL--YGA 69
Query: 383 SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRS---GLALGASRAIAYLHSKGP- 438
+ LV +Y GSL +LHG PL + T + L S+ +AYLHS P
Sbjct: 70 CLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 124
Query: 439 ANSHGNIKSSNILL-SKSYEARISDFGLAHLASPSSTPNR-IDGYRAPEVTDARKVSQKA 496
A H ++K N+LL + +I DFG A T N+ + APEV + S+K
Sbjct: 125 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 184
Query: 497 DVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
DV+S+G++L E++T + P +E G F + +
Sbjct: 185 DVFSWGIILWEVITRRKP----FDEIG----------------GPAFRIMWAVHNGTRPP 224
Query: 557 MVQLL-----QLAINCTAQYPDNRPSMAEVTSQIEEICR------SSLQQGQAHDLENG 604
+++ L L C ++ P RPSM E+ + + R LQ H L G
Sbjct: 225 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPG 283
>pdb|2Z60|A Chain A, Crystal Structure Of The T315i Mutant Of Abl Kinase Bound
With Ppy-A
pdb|3IK3|A Chain A, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
pdb|3IK3|B Chain B, Ap24534, A Pan-Bcr-Abl Inhibitor For Chronic Myeloid
Leukemi Potently Inhibits The T315i Mutant And Overcomes
Mutation-B Resistance
Length = 288
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 128/275 (46%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 21 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 80
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 81 EPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKNFI--HR 135
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 136 DLAARNCLVGENHLVKVADFGLSRLMTGDTYTAHAGAKFPIKWTAPESLAYNKFSIKSDV 195
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+DL + + + K D + R + E++
Sbjct: 196 WAFGVLLWEIATYGMSPYP------GIDLSQVYELLEK--------DYRMERPEGCPEKV 241
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 242 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 273
>pdb|3DAJ|A Chain A, Crystal Structure Of Aurora A Complexed With An Inhibitor
Discovered Through Site-Directed Dynamic Tethering
Length = 272
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 108/222 (48%), Gaps = 20/222 (9%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 7 RQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ R + E R+ +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY------RELQKLSRFDEQRTATYI 118
Query: 425 GA-SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG--- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + + G
Sbjct: 119 TELANALSYCHSKRVI--HRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRDTLCGTLD 175
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
Y PE+ + R +K D++S GVL E L G P +A +E
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|4GS6|A Chain A, Irreversible Inhibition Of Tak1 Kinase By 5z-7-oxozeaenol
Length = 315
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 83/299 (27%), Positives = 130/299 (43%), Gaps = 46/299 (15%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
EV+G+G FG KA V A+K+++ + K F ++ + ++H N+V L Y
Sbjct: 15 EVVGRGAFGVVCKAKWRAKDV-AIKQIESES-ERKAFIVELRQLSRVNHPNIVKL--YGA 70
Query: 383 SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRS---GLALGASRAIAYLHSKGP- 438
+ LV +Y GSL +LHG PL + T + L S+ +AYLHS P
Sbjct: 71 CLNPVCLVMEYAEGGSLYNVLHGAE-----PLPYYTAAHAMSWCLQCSQGVAYLHSMQPK 125
Query: 439 ANSHGNIKSSNILL-SKSYEARISDFGLAHLASPSSTPNR-IDGYRAPEVTDARKVSQKA 496
A H ++K N+LL + +I DFG A T N+ + APEV + S+K
Sbjct: 126 ALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAAWMAPEVFEGSNYSEKC 185
Query: 497 DVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEE 556
DV+S+G++L E++T + P +E G F + +
Sbjct: 186 DVFSWGIILWEVITRRKP----FDEIG----------------GPAFRIMWAVHNGTRPP 225
Query: 557 MVQLL-----QLAINCTAQYPDNRPSMAEVTSQIEEICR------SSLQQGQAHDLENG 604
+++ L L C ++ P RPSM E+ + + R LQ H L G
Sbjct: 226 LIKNLPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPG 284
>pdb|2WTW|A Chain A, Aurora-A Inhibitor Structure (2nd Crystal Form)
Length = 285
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 103/216 (47%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 8 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 65
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P G + L + + + +
Sbjct: 66 IQSHLRHPNILRLYGYFHDATRVYLILEYAPRGEVYKELQK-----LSKFDEQRTATYIT 120
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G Y
Sbjct: 121 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIADFGWS-VHAPSSRRTTLCGTLDY 177
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 178 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 213
>pdb|1OL6|A Chain A, Structure Of Unphosphorylated D274n Mutant Of Aurora-a
Length = 282
Score = 81.6 bits (200), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 5 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 62
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 63 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 117
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I++FG + + +PSS + G Y
Sbjct: 118 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDY 174
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 175 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 210
>pdb|3S95|A Chain A, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
pdb|3S95|B Chain B, Crystal Structure Of The Human Limk1 Kinase Domain In
Complex With Staurosporine
Length = 310
Score = 81.3 bits (199), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 64/221 (28%), Positives = 109/221 (49%), Gaps = 30/221 (13%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKMEVVG 367
R F DL+ EVLGKG FG A K T E G V+ +K L + +++ F ++++V+
Sbjct: 5 RIFRPSDLI--HGEVLGKGCFGQAIKVTHRETGEVMVMKELIRFDEETQRTFLKEVKVMR 62
Query: 368 SMDHENLVPLRAYYYSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
++H N++ Y +D++L + +Y+ G+L ++ + + W R A
Sbjct: 63 CLEHPNVLKFIGVLY-KDKRLNFITEYIKGGTLRGIIK----SMDSQYPWSQRVSFAKDI 117
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST----------PN 476
+ +AYLHS H ++ S N L+ ++ ++DFGLA L T P+
Sbjct: 118 ASGMAYLHSMNII--HRDLNSHNCLVRENKNVVVADFGLARLMVDEKTQPEGLRSLKKPD 175
Query: 477 RIDGYR--------APEVTDARKVSQKADVYSFGVLLLELL 509
R Y APE+ + R +K DV+SFG++L E++
Sbjct: 176 RKKRYTVVGNPYWMAPEMINGRSYDEKVDVFSFGIVLCEII 216
>pdb|2XNE|A Chain A, Structure Of Aurora-A Bound To An Imidazopyrazine
Inhibitor
Length = 272
Score = 81.3 bits (199), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 62/216 (28%), Positives = 105/216 (48%), Gaps = 18/216 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 6 RQWALEDF--EIGRPLGKGKFGNVYLAREKQSKFILALKVLFKAQLEKAGVEHQLRREVE 63
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ L + + + +
Sbjct: 64 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVYRELQK-----LSKFDEQRTATYIT 118
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
+ A++Y HSK H +IK N+LL + E +I++FG + + +PSS + G Y
Sbjct: 119 ELANALSYCHSKRVI--HRDIKPENLLLGSAGELKIANFGWS-VHAPSSRRTTLCGTLDY 175
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ + R +K D++S GVL E L GK P +A
Sbjct: 176 LPPEMIEGRMHDEKVDLWSLGVLCYEFLVGKPPFEA 211
>pdb|3D14|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly,
Lys240->arg, Met302- >leu) In Complex With
1-{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)- Ethyl]-
Thiazol-2-Yl}-3-(3-Trifluoromethyl-Phenyl)-Urea
pdb|3DJ5|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 290.
pdb|3DJ6|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 823.
pdb|3DJ7|A Chain A, Crystal Structure Of The Mouse Aurora-A Catalytic Domain
(Asn186->gly, Lys240->arg, Met302->leu) In Complex With
Compound 130.
pdb|3D15|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
1-(3-Chloro-Phenyl)-3-
{5-[2-(Thieno[3,2-D]pyrimidin-4-Ylamino)-
Ethyl]-Thiazol-2- Yl}-Urea [sns-314]
pdb|3D2I|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With 1-{5-[2-(1-Methyl-1h-
Pyrazolo[4,
3-D]pyrimidin-7-Ylamino)-Ethyl]-Thiazol-2-Yl}-3-
(3-Trifluoromethyl-Phenyl)-Urea
pdb|3D2K|A Chain A, Crystal Structure Of Mouse Aurora A (Asn186->gly, Lys240-
>arg, Met302->leu) In Complex With
[7-(2-{2-[3-(3-Chloro-
Phenyl)-Ureido]-Thiazol-5-Yl}-Ethylamino)-Pyrazolo[4,3-
D]pyrimidin-1-Yl]-Acetic Acid
Length = 272
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 65/222 (29%), Positives = 107/222 (48%), Gaps = 20/222 (9%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVS----EKEFREKME 364
R + LED LGKG FG Y A + ++A+K L + E + R ++E
Sbjct: 7 RQWTLEDF--DIGRPLGKGKFGNVYLARERQSKFILALKVLFKTQLEKAGVEHQLRREVE 64
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y++ L+ +Y P+G++ R + E R+ +
Sbjct: 65 IQSHLRHPNILRLYGYFHDATRVYLILEYAPLGTVY------RELQKLSRFDEQRTATYI 118
Query: 425 GA-SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG--- 480
+ A++Y HSK H +IK N+LL + E +I+DFG + + +PSS + G
Sbjct: 119 TELANALSYCHSKRVI--HRDIKPENLLLGSNGELKIADFGWS-VHAPSSRRTTLCGTLD 175
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
Y PE+ + R +K D++S GVL E L G P +A +E
Sbjct: 176 YLPPEMIEGRMHDEKVDLWSLGVLCYEFLVGMPPFEAHTYQE 217
>pdb|3DK7|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK7|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 277
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 79 EPPFYIIIEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHR 133
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTXTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+D P V ++++++ E R + E++
Sbjct: 194 WAFGVLLWEIATYGMSPYP------GID-PSQVYELLEKDYRME-------RPEGCPEKV 239
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 240 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3DK3|A Chain A, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
pdb|3DK3|B Chain B, Crystal Structure Of Mutant Abl Kinase Domain In Complex
With Small Molecule Fragment
Length = 293
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 74/275 (26%), Positives = 130/275 (47%), Gaps = 29/275 (10%)
Query: 325 LGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYS 383
LG G +G Y+ + + VAVK LK+ T+ +EF ++ V+ + H NLV L
Sbjct: 19 LGGGQYGEVYEGVWKKYSLTVAVKTLKEDTMEVEEFLKEAAVMKEIKHPNLVQLLGVCTR 78
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
++ ++M G+L L R R ++ +A S A+ YL K H
Sbjct: 79 EPPFYIITEFMTYGNLLDYL---RECNRQEVSAVVLLYMATQISSAMEYLEKKN--FIHR 133
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADV 498
++ + N L+ +++ +++DFGL+ L + + + APE K S K+DV
Sbjct: 134 DLAARNCLVGENHLVKVADFGLSRLMTGDTFTAHAGAKFPIKWTAPESLAYNKFSIKSDV 193
Query: 499 YSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEM 557
++FGVLL E+ T G +P G+D P V ++++++ E R + E++
Sbjct: 194 WAFGVLLWEIATYGMSPYP------GID-PSQVYELLEKDYRME-------RPEGCPEKV 239
Query: 558 VQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
+L++ C P +RPS AE+ E + + S
Sbjct: 240 YELMR---ACWQWNPSDRPSFAEIHQAFETMFQES 271
>pdb|3ZDI|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Inhibitor 7d
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 322 AEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRA 379
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 380 YYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
++YS EK LV DY+P H +R P+ + L R++AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 434 HSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTD 488
HS G H +IK N+LL ++ DFG A P+ + YRAPE +
Sbjct: 139 HSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
A + DV+S G +L ELL G+ + GVD
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|3F7Z|A Chain A, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
pdb|3F7Z|B Chain B, X-ray Co-crystal Structure Of Glycogen Synthase Kinase
3beta In Complex With An Inhibitor
Length = 350
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 322 AEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRA 379
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR
Sbjct: 26 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 81
Query: 380 YYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
++YS EK LV DY+P H +R P+ + L R++AY+
Sbjct: 82 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 139
Query: 434 HSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTD 488
HS G H +IK N+LL ++ DFG A P+ + YRAPE +
Sbjct: 140 HSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 197
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
A + DV+S G +L ELL G+ + GVD
Sbjct: 198 ATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 231
>pdb|3GB2|A Chain A, Gsk3beta Inhibitor Complex
Length = 353
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH
Sbjct: 22 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHC 77
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 78 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 135
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 136 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 193
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 194 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 234
>pdb|3F88|A Chain A, Glycogen Synthase Kinase 3beta Inhibitor Complex
pdb|3F88|B Chain B, Glycogen Synthase Kinase 3beta Inhibitor Complex
Length = 349
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 322 AEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRA 379
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 380 YYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
++YS EK LV DY+P H +R P+ + L R++AY+
Sbjct: 81 FFYSSGEKKDVVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 434 HSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTD 488
HS G H +IK N+LL ++ DFG A P+ + YRAPE +
Sbjct: 139 HSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
A + DV+S G +L ELL G+ + GVD
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|2OW3|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
pdb|2OW3|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With Bis-
(Indole)maleimide Pyridinophane Inhibitor
Length = 352
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 108/217 (49%), Gaps = 24/217 (11%)
Query: 322 AEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRA 379
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR
Sbjct: 25 TKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRY 80
Query: 380 YYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
++YS EK LV DY+P H +R P+ + L R++AY+
Sbjct: 81 FFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYI 138
Query: 434 HSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTD 488
HS G H +IK N+LL ++ DFG A P+ + YRAPE +
Sbjct: 139 HSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFG 196
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
A + DV+S G +L ELL G+ + GVD
Sbjct: 197 ATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|3GVU|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
Gleevec
pdb|3HMI|A Chain A, The Crystal Structure Of Human Abl2 In Complex With
5-Amino-3-{[4-
(Aminosulfonyl)phenyl]amino}-N-(2,
6-Difluorophenyl)-1h-1,2,4- Triazole-1-Carbothioamide
pdb|2XYN|A Chain A, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|B Chain B, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
pdb|2XYN|C Chain C, Human Abl2 In Complex With Aurora Kinase Inhibitor Vx-680
Length = 292
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 80/299 (26%), Positives = 132/299 (44%), Gaps = 34/299 (11%)
Query: 303 VFFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFRE 361
++F D+ +++E LG G +G Y + + VAVK LK+ T+ +EF +
Sbjct: 19 LYFQSMDK-WEMERTDITMKHKLGGGQYGEVYVGVWKKYSLTVAVKTLKEDTMEVEEFLK 77
Query: 362 KMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG 421
+ V+ + H NLV L +V +YMP G+L L R R +
Sbjct: 78 EAAVMKEIKHPNLVQLLGVCTLEPPFYIVTEYMPYGNLLDYL---RECNREEVTAVVLLY 134
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG- 480
+A S A+ YL K H ++ + N L+ +++ +++DFGL+ L + +
Sbjct: 135 MATQISSAMEYLEKKN--FIHRDLAARNCLVGENHVVKVADFGLSRLMTGDTYTAHAGAK 192
Query: 481 ----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
+ APE S K+DV++FGVLL E+ T G +P G+DL
Sbjct: 193 FPIKWTAPESLAYNTFSIKSDVWAFGVLLWEIATYGMSPYP------GIDL--------- 237
Query: 536 EEWTAEVFDL--ELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSS 592
++V+DL + R + E ++ +L C P +RPS AE E + S
Sbjct: 238 ----SQVYDLLEKGYRMEQPEGCPPKVYELMRACWKWSPADRPSFAETHQAFETMFHDS 292
>pdb|3RIZ|A Chain A, Crystal Structure Of The Plant Steroid Receptor Bri1
Ectodomain
pdb|3RJ0|A Chain A, Plant Steroid Receptor Bri1 Ectodomain In Complex With
Brassinolide
Length = 772
Score = 80.9 bits (198), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 50 GLSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFS 109
G +G++P + N +EL ++ L FN L GTIPS LS LR+L L N+ GEIP L
Sbjct: 402 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 461
Query: 110 LGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPD-LGAFSSLAQFNVSFN 168
+ L L L N+ +G I + + T L + L N+LTG IP +G +LA +S N
Sbjct: 462 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 521
Query: 169 KLNGSIPKRFA 179
+G+IP
Sbjct: 522 SFSGNIPAELG 532
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
Query: 39 ERVTMLRFPGMGLSGQLPIAIGNLTELHTVSLRFNALRGTIPSD-FAKLSNLRNLYLQGN 97
+ +T L G G +P G+ + L +++L N G +P D K+ L+ L L N
Sbjct: 291 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 350
Query: 98 LFSGEIPGLLFSL-GNLIRLNLAKNNFSGTISADF--NKLTRLGTLYLQENQLTGSIP-D 153
FSGE+P L +L +L+ L+L+ NNFSG I + N L LYLQ N TG IP
Sbjct: 351 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 410
Query: 154 LGAFSSLAQFNVSFNKLNGSIPKRFARL 181
L S L ++SFN L+G+IP L
Sbjct: 411 LSNCSELVSLHLSFNYLSGTIPSSLGSL 438
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 51 LSGQLPIAIGNLT-ELHTVSLRFNALRGTIPSDFAK--LSNLRNLYLQGNLFSGEIPGLL 107
SG+LP ++ NL+ L T+ L N G I + + + L+ LYLQ N F+G+IP L
Sbjct: 352 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 411
Query: 108 FSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIP-DLGAFSSLAQFNVS 166
+ L+ L+L+ N SGTI + L++L L L N L G IP +L +L +
Sbjct: 412 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 471
Query: 167 FNKLNGSIP 175
FN L G IP
Sbjct: 472 FNDLTGEIP 480
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
L G++P + + L T+ L FN L G IPS + +NL + L N +GEIP + L
Sbjct: 451 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 510
Query: 111 GNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIP 152
NL L L+ N+FSG I A+ L L L N G+IP
Sbjct: 511 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 552
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
L+G++P + N T L+ +SL N L G IP +L NL L L N FSG IP L
Sbjct: 475 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 534
Query: 111 GNLIRLNLAKNNFSGTISA 129
+LI L+L N F+GTI A
Sbjct: 535 RSLIWLDLNTNLFNGTIPA 553
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 68 VSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTI 127
+ + +N L G IP + + L L L N SG IP + L L L+L+ N G I
Sbjct: 634 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 693
Query: 128 SADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQFNVSFNKLNGSIPKRFARLPSSAFE 187
+ LT L + L N L+G IP++G F + P +F P
Sbjct: 694 PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP-------------PAKFLNNP----- 735
Query: 188 GNSLCGKPLVSC 199
LCG PL C
Sbjct: 736 --GLCGYPLPRC 745
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 23/155 (14%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
L+G++P IG L L + L N+ G IP++ +L L L NLF+G IP +F
Sbjct: 499 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 558
Query: 111 GNLIRLNL--------AKNN--------------FSGTISADFNKLTRLGTLYLQENQLT 148
I N KN+ F G S N+L+ +
Sbjct: 559 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 618
Query: 149 G-SIPDLGAFSSLAQFNVSFNKLNGSIPKRFARLP 182
G + P S+ ++S+N L+G IPK +P
Sbjct: 619 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 653
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
LSG +P IG++ L ++L N + G+IP + L L L L N G IP + +L
Sbjct: 641 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 700
Query: 111 GNLIRLNLAKNNFSGTI 127
L ++L+ NN SG I
Sbjct: 701 TMLTEIDLSNNNLSGPI 717
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Query: 16 GGRTLLWNLTDGPCKWVGVFCTGERVTMLRFPGMGLSGQLPIAIGNLTELHTVSLRFNAL 75
G + W L+DG GE + L G +SG + + L + + N
Sbjct: 162 GANVVGWVLSDG---------CGE-LKHLAISGNKISGD--VDVSRCVNLEFLDVSSNNF 209
Query: 76 RGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLT 135
IP S L++L + GN SG+ + + L LN++ N F G I L
Sbjct: 210 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLK 266
Query: 136 RLGTLYLQENQLTGSIPDL--GAFSSLAQFNVSFNKLNGSIPKRFA 179
L L L EN+ TG IPD GA +L ++S N G++P F
Sbjct: 267 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 312
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 30/172 (17%)
Query: 44 LRFPGMGLSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEI 103
L G LSG AI TEL +++ N G IP L +L+ L L N F+GEI
Sbjct: 225 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEI 282
Query: 104 PGLLF-SLGNLIRLNLA------------------------KNNFSGTISAD-FNKLTRL 137
P L + L L+L+ NNFSG + D K+ L
Sbjct: 283 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 342
Query: 138 GTLYLQENQLTGSIPD--LGAFSSLAQFNVSFNKLNGSIPKRFARLPSSAFE 187
L L N+ +G +P+ +SL ++S N +G I + P + +
Sbjct: 343 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 394
Score = 35.8 bits (81), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIP 104
+SG +P +G+L L+ + L N L G IP + L+ L + L N SG IP
Sbjct: 665 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 718
Score = 35.4 bits (80), Expect = 0.086, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 85 KLSNLRNLYLQGNLFSG-EIPGLLFS--LGNLIRLNLAKNNFSGTISADFNKLTRLGTLY 141
KL++L L L N SG + G + S G L L ++ N SG + D ++ L L
Sbjct: 146 KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLD 203
Query: 142 LQENQLTGSIPDLGAFSSLAQFNVSFNKLNGSIPKRFARLPSSAFE 187
+ N + IP LG S+L ++S NKL+G F+R S+ E
Sbjct: 204 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGD----FSRAISTCTE 245
Score = 31.2 bits (69), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 8 LLTLRKAIGGRTLL--WNLTDGPCKWVGVFCTGERVTMLRFPGMGLSGQLPIAIGNLTEL 65
L++ + + + LL W+ PC + GV C ++VT + L+ +L L
Sbjct: 14 LISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSL 73
Query: 66 HTVSLRF---NALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGL--LFSLGNLIRLNLAK 120
+ F + + G++ S F ++L +L L N SG + L L S L LN++
Sbjct: 74 TGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSS 132
Query: 121 N--NFSGTISADFNKLTRLGTLYLQENQLTGS 150
N +F G +S KL L L L N ++G+
Sbjct: 133 NTLDFPGKVSGGL-KLNSLEVLDLSANSISGA 163
>pdb|1GNG|A Chain A, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
pdb|1GNG|B Chain B, Glycogen Synthase Kinase-3 Beta (Gsk3) Complex With
Frattide Peptide
Length = 378
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 45 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 100
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 101 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 158
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 159 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 216
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 217 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 249
>pdb|3ZRK|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRK|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRL|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As
Gsk-3beta Inhibitors
pdb|3ZRM|A Chain A, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
pdb|3ZRM|B Chain B, Identification Of 2-(4-Pyridyl)thienopyridinones As Gsk-
3beta Inhibitors
Length = 371
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH
Sbjct: 30 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHC 85
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 86 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 143
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 144 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 201
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 202 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 242
>pdb|4AFJ|A Chain A, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
pdb|4AFJ|B Chain B, 5-Aryl-4-Carboxamide-1,3-Oxazoles: Potent And Selective
Gsk-3 Inhibitors
Length = 367
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 34 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 89
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 90 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 147
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 148 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 205
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 206 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 238
>pdb|2R2P|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 5 (Epha5)
Length = 295
Score = 80.5 bits (197), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/283 (25%), Positives = 134/283 (47%), Gaps = 39/283 (13%)
Query: 324 VLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVP 376
V+G G FG L++ + VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 29 VIGAGEFGEVCSGRLKLPGKRELPVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNIIH 87
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++V +YM GSL L N G G+ G S + YL
Sbjct: 88 LEGVVTKSKPVMIVTEYMENGSLDTFLKKNDGQ----FTVIQLVGMLRGISAGMKYLSDM 143
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTDA 489
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + APE
Sbjct: 144 G--YVHRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAF 201
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELL 548
RK + +DV+S+G+++ E+++ G+ P + N++ V V+E +
Sbjct: 202 RKFTSASDVWSYGIVMWEVVSYGERPYWEMTNQD-------VIKAVEEGY---------- 244
Query: 549 RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + + L QL ++C + ++RP E+ + ++++ R+
Sbjct: 245 RLPSPMDCPAALYQLMLDCWQKERNSRPKFDEIVNMLDKLIRN 287
>pdb|3SAY|A Chain A, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
pdb|3SAY|B Chain B, Crystal Structure Of Human Glycogen Synthase Kinase 3 Beta
(Gsk3b) In Complex With Inhibitor 142
Length = 430
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 173
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 174 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 231
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 264
>pdb|3RGX|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
pdb|3RGZ|A Chain A, Structural Insight Into Brassinosteroid Perception By Bri1
Length = 768
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 50/131 (38%), Positives = 71/131 (54%), Gaps = 1/131 (0%)
Query: 50 GLSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFS 109
G +G++P + N +EL ++ L FN L GTIPS LS LR+L L N+ GEIP L
Sbjct: 405 GFTGKIPPTLSNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMY 464
Query: 110 LGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPD-LGAFSSLAQFNVSFN 168
+ L L L N+ +G I + + T L + L N+LTG IP +G +LA +S N
Sbjct: 465 VKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNN 524
Query: 169 KLNGSIPKRFA 179
+G+IP
Sbjct: 525 SFSGNIPAELG 535
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 77/148 (52%), Gaps = 5/148 (3%)
Query: 39 ERVTMLRFPGMGLSGQLPIAIGNLTELHTVSLRFNALRGTIPSD-FAKLSNLRNLYLQGN 97
+ +T L G G +P G+ + L +++L N G +P D K+ L+ L L N
Sbjct: 294 DTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGLKVLDLSFN 353
Query: 98 LFSGEIPGLLFSL-GNLIRLNLAKNNFSGTISADF--NKLTRLGTLYLQENQLTGSIP-D 153
FSGE+P L +L +L+ L+L+ NNFSG I + N L LYLQ N TG IP
Sbjct: 354 EFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPT 413
Query: 154 LGAFSSLAQFNVSFNKLNGSIPKRFARL 181
L S L ++SFN L+G+IP L
Sbjct: 414 LSNCSELVSLHLSFNYLSGTIPSSLGSL 441
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/129 (37%), Positives = 69/129 (53%), Gaps = 4/129 (3%)
Query: 51 LSGQLPIAIGNLT-ELHTVSLRFNALRGTIPSDFAK--LSNLRNLYLQGNLFSGEIPGLL 107
SG+LP ++ NL+ L T+ L N G I + + + L+ LYLQ N F+G+IP L
Sbjct: 355 FSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQELYLQNNGFTGKIPPTL 414
Query: 108 FSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIP-DLGAFSSLAQFNVS 166
+ L+ L+L+ N SGTI + L++L L L N L G IP +L +L +
Sbjct: 415 SNCSELVSLHLSFNYLSGTIPSSLGSLSKLRDLKLWLNMLEGEIPQELMYVKTLETLILD 474
Query: 167 FNKLNGSIP 175
FN L G IP
Sbjct: 475 FNDLTGEIP 483
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 53/102 (51%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
L G++P + + L T+ L FN L G IPS + +NL + L N +GEIP + L
Sbjct: 454 LEGEIPQELMYVKTLETLILDFNDLTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRL 513
Query: 111 GNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIP 152
NL L L+ N+FSG I A+ L L L N G+IP
Sbjct: 514 ENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIP 555
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 45/79 (56%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
L+G++P + N T L+ +SL N L G IP +L NL L L N FSG IP L
Sbjct: 478 LTGEIPSGLSNCTNLNWISLSNNRLTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDC 537
Query: 111 GNLIRLNLAKNNFSGTISA 129
+LI L+L N F+GTI A
Sbjct: 538 RSLIWLDLNTNLFNGTIPA 556
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/132 (30%), Positives = 55/132 (41%), Gaps = 20/132 (15%)
Query: 68 VSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTI 127
+ + +N L G IP + + L L L N SG IP + L L L+L+ N G I
Sbjct: 637 LDMSYNMLSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRI 696
Query: 128 SADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQFNVSFNKLNGSIPKRFARLPSSAFE 187
+ LT L + L N L+G IP++G F + P +F P
Sbjct: 697 PQAMSALTMLTEIDLSNNNLSGPIPEMGQFETFP-------------PAKFLNNP----- 738
Query: 188 GNSLCGKPLVSC 199
LCG PL C
Sbjct: 739 --GLCGYPLPRC 748
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 42/155 (27%), Positives = 63/155 (40%), Gaps = 23/155 (14%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
L+G++P IG L L + L N+ G IP++ +L L L NLF+G IP +F
Sbjct: 502 LTGEIPKWIGRLENLAILKLSNNSFSGNIPAELGDCRSLIWLDLNTNLFNGTIPAAMFKQ 561
Query: 111 GNLIRLNL--------AKNN--------------FSGTISADFNKLTRLGTLYLQENQLT 148
I N KN+ F G S N+L+ +
Sbjct: 562 SGKIAANFIAGKRYVYIKNDGMKKECHGAGNLLEFQGIRSEQLNRLSTRNPCNITSRVYG 621
Query: 149 G-SIPDLGAFSSLAQFNVSFNKLNGSIPKRFARLP 182
G + P S+ ++S+N L+G IPK +P
Sbjct: 622 GHTSPTFDNNGSMMFLDMSYNMLSGYIPKEIGSMP 656
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 41/77 (53%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSL 110
LSG +P IG++ L ++L N + G+IP + L L L L N G IP + +L
Sbjct: 644 LSGYIPKEIGSMPYLFILNLGHNDISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSAL 703
Query: 111 GNLIRLNLAKNNFSGTI 127
L ++L+ NN SG I
Sbjct: 704 TMLTEIDLSNNNLSGPI 720
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 48/166 (28%), Positives = 70/166 (42%), Gaps = 17/166 (10%)
Query: 16 GGRTLLWNLTDGPCKWVGVFCTGERVTMLRFPGMGLSGQLPIAIGNLTELHTVSLRFNAL 75
G + W L+DG GE + L G +SG + + L + + N
Sbjct: 165 GANVVGWVLSDG---------CGE-LKHLAISGNKISGD--VDVSRCVNLEFLDVSSNNF 212
Query: 76 RGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLT 135
IP S L++L + GN SG+ + + L LN++ N F G I L
Sbjct: 213 STGIPF-LGDCSALQHLDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPPL--PLK 269
Query: 136 RLGTLYLQENQLTGSIPDL--GAFSSLAQFNVSFNKLNGSIPKRFA 179
L L L EN+ TG IPD GA +L ++S N G++P F
Sbjct: 270 SLQYLSLAENKFTGEIPDFLSGACDTLTGLDLSGNHFYGAVPPFFG 315
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 70/172 (40%), Gaps = 30/172 (17%)
Query: 44 LRFPGMGLSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEI 103
L G LSG AI TEL +++ N G IP L +L+ L L N F+GEI
Sbjct: 228 LDISGNKLSGDFSRAISTCTELKLLNISSNQFVGPIPP--LPLKSLQYLSLAENKFTGEI 285
Query: 104 PGLLF-SLGNLIRLNLA------------------------KNNFSGTISAD-FNKLTRL 137
P L + L L+L+ NNFSG + D K+ L
Sbjct: 286 PDFLSGACDTLTGLDLSGNHFYGAVPPFFGSCSLLESLALSSNNFSGELPMDTLLKMRGL 345
Query: 138 GTLYLQENQLTGSIPD--LGAFSSLAQFNVSFNKLNGSIPKRFARLPSSAFE 187
L L N+ +G +P+ +SL ++S N +G I + P + +
Sbjct: 346 KVLDLSFNEFSGELPESLTNLSASLLTLDLSSNNFSGPILPNLCQNPKNTLQ 397
Score = 35.8 bits (81), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 51 LSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIP 104
+SG +P +G+L L+ + L N L G IP + L+ L + L N SG IP
Sbjct: 668 ISGSIPDEVGDLRGLNILDLSSNKLDGRIPQAMSALTMLTEIDLSNNNLSGPIP 721
Score = 35.4 bits (80), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 52/106 (49%), Gaps = 9/106 (8%)
Query: 85 KLSNLRNLYLQGNLFSG-EIPGLLFS--LGNLIRLNLAKNNFSGTISADFNKLTRLGTLY 141
KL++L L L N SG + G + S G L L ++ N SG + D ++ L L
Sbjct: 149 KLNSLEVLDLSANSISGANVVGWVLSDGCGELKHLAISGNKISGDV--DVSRCVNLEFLD 206
Query: 142 LQENQLTGSIPDLGAFSSLAQFNVSFNKLNGSIPKRFARLPSSAFE 187
+ N + IP LG S+L ++S NKL+G F+R S+ E
Sbjct: 207 VSSNNFSTGIPFLGDCSALQHLDISGNKLSGD----FSRAISTCTE 248
Score = 31.2 bits (69), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 69/152 (45%), Gaps = 11/152 (7%)
Query: 8 LLTLRKAIGGRTLL--WNLTDGPCKWVGVFCTGERVTMLRFPGMGLSGQLPIAIGNLTEL 65
L++ + + + LL W+ PC + GV C ++VT + L+ +L L
Sbjct: 17 LISFKDVLPDKNLLPDWSSNKNPCTFDGVTCRDDKVTSIDLSSKPLNVGFSAVSSSLLSL 76
Query: 66 HTVSLRF---NALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGL--LFSLGNLIRLNLAK 120
+ F + + G++ S F ++L +L L N SG + L L S L LN++
Sbjct: 77 TGLESLFLSNSHINGSV-SGFKCSASLTSLDLSRNSLSGPVTTLTSLGSCSGLKFLNVSS 135
Query: 121 N--NFSGTISADFNKLTRLGTLYLQENQLTGS 150
N +F G +S KL L L L N ++G+
Sbjct: 136 NTLDFPGKVSGGL-KLNSLEVLDLSANSISGA 166
>pdb|3SD0|A Chain A, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|3SD0|B Chain B, Identification Of A Glycogen Synthase Kinase-3b Inhibitor
That Attenuates Hyperactivity In Clock Mutant Mice
pdb|4B7T|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide And Leucettine L4
Length = 350
Score = 80.5 bits (197), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHC 73
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|4DIT|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Imidazopyridine Inhibitor
Length = 382
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 38 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 93
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 94 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 151
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 152 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYRAPELIFGA 209
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 210 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 242
>pdb|3BBT|B Chain B, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBT|D Chain D, Crystal Structure Of The Erbb4 Kinase In Complex With
Lapatinib
pdb|3BBW|B Chain B, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BBW|A Chain A, Crystal Structure Of The Erbb4 Kinase In Its Inactive
Conformation
pdb|3BCE|A Chain A, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|B Chain B, Crystal Structure Of The Erbb4 Kinase
pdb|3BCE|C Chain C, Crystal Structure Of The Erbb4 Kinase
Length = 328
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 322 AEVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVT--VSEKEFREKMEVVGSMDHENL 374
+VLG G FGT YK + I VA+K L + T + EF ++ ++ SMDH +L
Sbjct: 20 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 79
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRG--AGRTPLNWETRSGLALGASRAIAY 432
V L S +L V MP G L +H ++ + LNW + ++ + Y
Sbjct: 80 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 132
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EV 486
L + H ++ + N+L+ +I+DFGLA L DG + P E
Sbjct: 133 LEERRLV--HRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 190
Query: 487 TDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
RK + ++DV+S+GV + EL+T G P + E DL
Sbjct: 191 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 231
>pdb|1I09|A Chain A, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1I09|B Chain B, Structure Of Glycogen Synthase Kinase-3 (Gsk3b)
pdb|1J1B|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1B|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Amppnp
pdb|1J1C|A Chain A, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|1J1C|B Chain B, Binary Complex Structure Of Human Tau Protein Kinase I
With Adp
pdb|2JLD|A Chain A, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|2JLD|B Chain B, Extremely Tight Binding Of Ruthenium Complex To Glycogen
Synthase Kinase 3
pdb|3M1S|A Chain A, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3M1S|B Chain B, Structure Of Ruthenium Half-Sandwich Complex Bound To
Glycogen Synthase Kinase 3
pdb|3PUP|A Chain A, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
pdb|3PUP|B Chain B, Structure Of Glycogen Synthase Kinase 3 Beta (Gsk3b) In
Complex With A Ruthenium Octasporine Ligand (Os1)
Length = 420
Score = 80.1 bits (196), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 60 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 115
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 116 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 173
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 174 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 231
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 232 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 264
>pdb|1Q5K|A Chain A, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|1Q5K|B Chain B, Crystal Structure Of Glycogen Synthase Kinase 3 In
Complexed With Inhibitor
pdb|3I4B|A Chain A, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3I4B|B Chain B, Crystal Structure Of Gsk3b In Complex With A
Pyrimidylpyrrole Inhibitor
pdb|3L1S|A Chain A, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
pdb|3L1S|B Chain B, 3-Aryl-4-(Arylhydrazono)-1h-Pyrazol-5-Ones: Highly Ligand
Efficient And Potent Inhibitors Of Gsk3
Length = 414
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 54 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 109
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 110 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 167
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 168 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 225
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 226 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 258
>pdb|1R0E|A Chain A, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
pdb|1R0E|B Chain B, Glycogen Synthase Kinase-3 Beta In Complex With
3-Indolyl-4- Arylmaleimide Inhibitor
Length = 391
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 31 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 86
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 87 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 144
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 145 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 202
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 203 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 235
>pdb|1PYX|A Chain A, Gsk-3 Beta Complexed With Amp-Pnp
pdb|1PYX|B Chain B, Gsk-3 Beta Complexed With Amp-Pnp
pdb|3DU8|A Chain A, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
pdb|3DU8|B Chain B, Crystal Structure Of Gsk-3 Beta In Complex With
Nms-869553a
Length = 422
Score = 80.1 bits (196), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH
Sbjct: 54 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHC 109
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 110 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 167
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 168 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 225
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 226 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 266
>pdb|2O5K|A Chain A, Crystal Structure Of Gsk3beta In Complex With A
Benzoimidazol Inhibitor
Length = 372
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 39 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 94
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 95 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 152
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 153 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 210
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 211 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 243
>pdb|2R4B|A Chain A, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
pdb|2R4B|B Chain B, Erbb4 Kinase Domain Complexed With A Thienopyrimidine
Inhibitor
Length = 321
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 102/221 (46%), Gaps = 25/221 (11%)
Query: 322 AEVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVT--VSEKEFREKMEVVGSMDHENL 374
+VLG G FGT YK + I VA+K L + T + EF ++ ++ SMDH +L
Sbjct: 43 VKVLGSGAFGTVYKGIWVPEGETVKIPVAIKILNETTGPKANVEFMDEALIMASMDHPHL 102
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRG--AGRTPLNWETRSGLALGASRAIAY 432
V L S +L V MP G L +H ++ + LNW + ++ + Y
Sbjct: 103 VRLLGVCLSPTIQL-VTQLMPHGCLLEYVHEHKDNIGSQLLLNW------CVQIAKGMMY 155
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EV 486
L + H ++ + N+L+ +I+DFGLA L DG + P E
Sbjct: 156 LEER--RLVHRDLAARNVLVKSPNHVKITDFGLARLLEGDEKEYNADGGKMPIKWMALEC 213
Query: 487 TDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
RK + ++DV+S+GV + EL+T G P + E DL
Sbjct: 214 IHYRKFTHQSDVWSYGVTIWELMTFGGKPYDGIPTREIPDL 254
>pdb|4ACC|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACC|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACD|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACD|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACG|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACG|B Chain B, Gsk3b In Complex With Inhibitor
pdb|4ACH|A Chain A, Gsk3b In Complex With Inhibitor
pdb|4ACH|B Chain B, Gsk3b In Complex With Inhibitor
Length = 465
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 111/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH
Sbjct: 97 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHC 152
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 153 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 210
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 211 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 268
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 269 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 309
>pdb|2QOK|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:s768a Triple Mutant
Length = 373
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGLA + A+ ++ +I + +PE
Sbjct: 166 MGYV--HRDLAARNILINSNLVCKVSDFGLARVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N++ V V E +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDEGY--------- 267
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1Q3D|A Chain A, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3D|B Chain B, Gsk-3 Beta Complexed With Staurosporine
pdb|1Q3W|A Chain A, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q3W|B Chain B, Gsk-3 Beta Complexed With Alsterpaullone
pdb|1Q41|A Chain A, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q41|B Chain B, Gsk-3 Beta Complexed With Indirubin-3'-Monoxime
pdb|1Q4L|A Chain A, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|1Q4L|B Chain B, Gsk-3 Beta Complexed With Inhibitor I-5
pdb|3Q3B|A Chain A, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
pdb|3Q3B|B Chain B, 6-Amino-4-(Pyrimidin-4-Yl)pyridones: Novel Glycogen
Synthase Kinase-3 Inhibitors
Length = 424
Score = 79.7 bits (195), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 68/216 (31%), Positives = 108/216 (50%), Gaps = 24/216 (11%)
Query: 323 EVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLRAY 380
+V+G G+FG Y+A L + G +VA+K++ + +K F+ + ++++ +DH N+V LR +
Sbjct: 64 KVIGNGSFGVVYQAKLCDSGELVAIKKV----LQDKRFKNRELQIMRKLDHCNIVRLRYF 119
Query: 381 YYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+YS EK LV DY+P H +R P+ + L R++AY+H
Sbjct: 120 FYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL--FRSLAYIH 177
Query: 435 SKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYRAPE-VTDA 489
S G H +IK N+LL ++ DFG A P+ + YRAPE + A
Sbjct: 178 SFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYRAPELIFGA 235
Query: 490 RKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
+ DV+S G +L ELL G+ + GVD
Sbjct: 236 TDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 268
>pdb|1O9U|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With Axin
Peptide
Length = 350
Score = 79.3 bits (194), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + K F+ + ++++ +DH
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPATVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSXICSRYYR 189
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|3DZQ|A Chain A, Human Epha3 Kinase Domain In Complex With Inhibitor
Awl-Ii- 38.3
pdb|4G2F|A Chain A, Human Epha3 Kinase Domain In Complex With Compound 7
pdb|4GK2|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 66
pdb|4GK3|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 87
pdb|4GK4|A Chain A, Human Epha3 Kinase Domain In Complex With Ligand 90
Length = 361
Score = 79.0 bits (193), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 39 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 97
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 98 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 153
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 154 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 211
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 212 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 254
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 255 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 298
>pdb|2QOI|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f:y602f
Double Mutant
Length = 373
Score = 78.6 bits (192), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 166 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N++ V V E +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDEGY--------- 267
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOC|A Chain A, Human Epha3 Kinase Domain, Phosphorylated, Amp-Pnp Bound
Structure
Length = 344
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 136
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 137 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 237
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|2QOF|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y596f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 166 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 266
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOD|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Y602f Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 166 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 266
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOO|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742f Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 72/284 (25%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 166 MGFV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N++ V V E +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDEGY--------- 267
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|2QOL|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596:y602:s768g Triple Mutant
Length = 373
Score = 78.6 bits (192), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 131/287 (45%), Gaps = 45/287 (15%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGL----------AHLASPSSTPNRIDGYRAPE 485
G H ++ + NIL++ + ++SDFGL A+ P R + +PE
Sbjct: 166 MGYV--HRDLAARNILINSNLVCKVSDFGLGRVLEDDPEAAYTTRGGKIPIR---WTSPE 220
Query: 486 VTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
RK + +DV+S+G++L E+++ G+ P + N++ V V E +
Sbjct: 221 AIAYRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDEGY------ 267
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 268 ----RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1H8F|A Chain A, Glycogen Synthase Kinase 3 Beta.
pdb|1H8F|B Chain B, Glycogen Synthase Kinase 3 Beta
Length = 352
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + K F+ + ++++ +DH
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|2GSF|A Chain A, The Human Epha3 Receptor Tyrosine Kinase And Juxtamembrane
Region
pdb|2QO2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Apo Structure
pdb|2QO9|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Phosphorylated, Amp-pnp Bound
Length = 373
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 132/284 (46%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + P + G + +PE
Sbjct: 166 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 266
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1UV5|A Chain A, Glycogen Synthase Kinase 3 Beta Complexed With
6-Bromoindirubin-3'-Oxime
Length = 350
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 68/224 (30%), Positives = 110/224 (49%), Gaps = 24/224 (10%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHE 372
+++ +V+G G+FG Y+A L + G +VA+K++ + K F+ + ++++ +DH
Sbjct: 18 QEVSYTDTKVIGNGSFGVVYQAKLCDSGELVAIKKV----LQGKAFKNRELQIMRKLDHC 73
Query: 373 NLVPLRAYYYSRDEKL------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V LR ++YS EK LV DY+P H +R P+ + L
Sbjct: 74 NIVRLRYFFYSSGEKKDEVYLNLVLDYVPETVYRVARHYSRAKQTLPVIYVKLYMYQL-- 131
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEA-RISDFGLAHL---ASPSSTPNRIDGYR 482
R++AY+HS G H +IK N+LL ++ DFG A P+ + YR
Sbjct: 132 FRSLAYIHSFG--ICHRDIKPQNLLLDPDTAVLKLCDFGSAKQLVRGEPNVSYICSRYYR 189
Query: 483 APE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
APE + A + DV+S G +L ELL G+ + GVD
Sbjct: 190 APELIFGATDYTSSIDVWSAGCVLAELLLGQP---IFPGDSGVD 230
>pdb|3FXX|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnye[ptyr]iw
pdb|3FY2|A Chain A, Human Epha3 Kinase And Juxtamembrane Region Bound To
Substrate Kqwdnyefiw
Length = 371
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 74/284 (26%), Positives = 135/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 49 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 107
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V +YM GSL + L A T + G+ G + + YL
Sbjct: 108 RLEGVVTKSKPVMIVTEYMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 163
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 164 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 221
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 222 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 264
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 265 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 308
>pdb|1BYG|A Chain A, Kinase Domain Of Human C-Terminal Src Kinase (Csk) In
Complex With Inhibitor Staurosporine
Length = 278
Score = 77.8 bits (190), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
+ +GKG FG G VAVK +K+ + + F + V+ + H NLV L
Sbjct: 27 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 84
Query: 383 SRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
L +V +YM GSL L R GR+ L + +L A+ YL +G
Sbjct: 85 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFV 139
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-GYRAPEVTDARKVSQKADVYS 500
H ++ + N+L+S+ A++SDFGL AS + ++ + APE +K S K+DV+S
Sbjct: 140 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 199
Query: 501 FGVLLLELLT-GKAP 514
FG+LL E+ + G+ P
Sbjct: 200 FGILLWEIYSFGRVP 214
>pdb|1MQB|A Chain A, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
pdb|1MQB|B Chain B, Crystal Structure Of Ephrin A2 (Epha2) Receptor Protein
Kinase
Length = 333
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/285 (24%), Positives = 125/285 (43%), Gaps = 40/285 (14%)
Query: 323 EVLGKGTFGTAYKATLEMG-----IVVAVKRLKDVTVSEKE---FREKMEVVGSMDHENL 374
+V+G G FG YK L+ + VA+K LK +EK+ F + ++G H N+
Sbjct: 50 KVIGAGEFGEVYKGMLKTSSGKKEVPVAIKTLK-AGYTEKQRVDFLGEAGIMGQFSHHNI 108
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L +++ +YM G+L L G + G+ G + + YL
Sbjct: 109 IRLEGVISKYKPMMIITEYMENGALDKFLREKDGE----FSVLQLVGMLRGIAAGMKYLA 164
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YRAPEVT 487
+ H ++ + NIL++ + ++SDFGL+ + P +T G + APE
Sbjct: 165 NMNYV--HRDLAARNILVNSNLVCKVSDFGLSRVLEDDPEATYTTSGGKIPIRWTAPEAI 222
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLE 546
RK + +DV+SFG+++ E++T G+ P L N E V + +
Sbjct: 223 SYRKFTSASDVWSFGIVMWEVMTYGERPYWELSNHE-------VMKAINDG--------- 266
Query: 547 LLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + + QL + C Q RP A++ S ++++ R+
Sbjct: 267 -FRLPTPMDCPSAIYQLMMQCWQQERARRPKFADIVSILDKLIRA 310
>pdb|3D7U|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
pdb|3D7U|C Chain C, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 263
Score = 77.4 bits (189), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
+ +GKG FG G VAVK +K+ + + F + V+ + H NLV L
Sbjct: 12 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 69
Query: 383 SRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
L +V +YM GSL L R GR+ L + +L A+ YL +G
Sbjct: 70 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFV 124
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-GYRAPEVTDARKVSQKADVYS 500
H ++ + N+L+S+ A++SDFGL AS + ++ + APE +K S K+DV+S
Sbjct: 125 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 184
Query: 501 FGVLLLELLT-GKAP 514
FG+LL E+ + G+ P
Sbjct: 185 FGILLWEIYSFGRVP 199
>pdb|4F0F|A Chain A, Crystal Structure Of The Roco4 Kinase Domain Bound To
Appcp From D. Discoideum
pdb|4F0G|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum
pdb|4F1T|A Chain A, Crystal Structure Of The Roco4 Kinase Domain From D.
Discoideum Bound To The Rock Inhibitor H1152
Length = 287
Score = 77.0 bits (188), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 67/251 (26%), Positives = 120/251 (47%), Gaps = 41/251 (16%)
Query: 325 LGKGTFGTAYKATL-EMGIVVAVKRL--------KDVTVSEKEFREKMEVVGSMDHENLV 375
+GKG FG +K L + VVA+K L ++ +EF+ ++ ++ +++H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L Y + +V +++P G L L P+ W + L L + I Y+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 436 KGPANSHGNIKSSNILLSKSYE-----ARISDFGLAHLASPSSTPNRIDGYR--APEVTD 488
+ P H +++S NI L E A+++DFGL+ S S + ++ APE
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGLSQ-QSVHSVSGLLGNFQWMAPETIG 199
Query: 489 ARKVS--QKADVYSFGVLLLELLTGKAPTQA----------LLNEEGV------DLPRWV 530
A + S +KAD YSF ++L +LTG+ P ++ EEG+ D P +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 531 QSVVKEEWTAE 541
++V++ W+ +
Sbjct: 260 RNVIELCWSGD 270
>pdb|1JPA|A Chain A, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
pdb|1JPA|B Chain B, Crystal Structure Of Unphosphorylated Ephb2 Receptor
Tyrosine Kinase And Juxtamembrane Region
Length = 312
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 129/285 (45%), Gaps = 39/285 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKD--VTVSEKEFREKMEVVGSMDHENLVP 376
+V+G G FG L++ I VA+K LK ++F + ++G DH N++
Sbjct: 39 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 98
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L +++ ++M GSL + L N G G+ G + + YL
Sbjct: 99 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLADM 154
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNRIDG--------YRAPEVT 487
H ++ + NIL++ + ++SDFGL+ L +S P + APE
Sbjct: 155 NYV--HRDLAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 212
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLE 546
RK + +DV+S+G+++ E+++ G+ P + N++ V + +++++
Sbjct: 213 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD-------VINAIEQDY-------- 257
Query: 547 LLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + ++RP ++ + ++++ R+
Sbjct: 258 --RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 300
>pdb|1K9A|A Chain A, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|B Chain B, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|C Chain C, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|D Chain D, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|E Chain E, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
pdb|1K9A|F Chain F, Crystal Structure Analysis Of Full-Length
Carboxyl-Terminal Src Kinase At 2.5 A Resolution
Length = 450
Score = 77.0 bits (188), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/195 (32%), Positives = 98/195 (50%), Gaps = 10/195 (5%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
+ +GKG FG G VAVK +K+ + + F + V+ + H NLV L
Sbjct: 199 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 256
Query: 383 SRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
L +V +YM GSL L R GR+ L + +L A+ YL +G
Sbjct: 257 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFV 311
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-GYRAPEVTDARKVSQKADVYS 500
H ++ + N+L+S+ A++SDFGL AS + ++ + APE +K S K+DV+S
Sbjct: 312 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREKKFSTKSDVWS 371
Query: 501 FGVLLLELLT-GKAP 514
FG+LL E+ + G+ P
Sbjct: 372 FGILLWEIYSFGRVP 386
>pdb|3K54|A Chain A, Structures Of Human Bruton's Tyrosine Kinase In Active And
Inactive Conformations Suggests A Mechanism Of
Activation For Tec Family Kinases
Length = 283
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/224 (28%), Positives = 101/224 (45%), Gaps = 14/224 (6%)
Query: 305 FGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKME 364
G G D +DL + LG G FG VA+K +K+ ++SE EF E+ +
Sbjct: 14 LGYGSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAK 71
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V+ ++ HE LV L + ++ +YM G L L R +T E +
Sbjct: 72 VMMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE----MCK 127
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---- 480
A+ YL SK H ++ + N L++ ++SDFGL+ + +
Sbjct: 128 DVCEAMEYLESK--QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEETSSVGSKFPV 185
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
+ PEV K S K+D+++FGVL+ E+ + GK P + N E
Sbjct: 186 RWSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|4DBN|A Chain A, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
pdb|4DBN|B Chain B, Crystal Structure Of The Kinase Domain Of Human B-Raf With
A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 284
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 29/277 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 79
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ + +V + SL LH T +A ++ + YLH+K H
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKSII--HR 133
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA + S S ++ + + APEV D S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + +V + + DL +R N
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------MVGRGYLSP--DLSKVR-SNCP 244
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+ M +L+ C + D RP ++ + IE + RS
Sbjct: 245 KAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 278
>pdb|3PIX|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Isopropyl-7-
(4-Methyl-Piperazin-1-Yl)-4-(5-Methyl-2h-Pyrazol-3-
Ylamino)-2h- Phthalazin-1-One
pdb|3PIY|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With R406
pdb|3PIZ|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
(5-Amino-1-O-
Tolyl-1h-Pyrazol-4-Yl)-[3-(1-Methanesulfonyl-Piperidin-
4-Yl)-Phenyl]- Methanone
pdb|3PJ1|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
3-(2,6-Dichloro-
Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-Phenylamino]-1-
Methyl-3,4- Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3PJ2|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-[4-(2-
Diethylamino-Ethoxy)-Phenylamino]-6-(4-Fluoro-Phenoxy)-
8-Methyl-8h- Pyrido[2,3-D]pyrimidin-7-One
pdb|3PJ3|A Chain A, Crystal Structure Of Btk Kinase Domain Complexed With
2-Methyl-5-[(E)-
(3-Phenyl-Acryloyl)amino]-N-(2-Phenyl-3h-Imidazo[4,
5-B]pyridin-6-Yl)- Benzamide
Length = 274
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 14/223 (6%)
Query: 306 GKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV 365
G G D +DL + LG G FG VA+K +K+ ++SE EF E+ +V
Sbjct: 6 GYGSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKV 63
Query: 366 VGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG 425
+ ++ HE LV L + ++ +YM G L L R +T E +
Sbjct: 64 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE----MCKD 119
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG----- 480
A+ YL SK H ++ + N L++ ++SDFGL+ + +
Sbjct: 120 VCEAMEYLESK--QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 177
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
+ PEV K S K+D+++FGVL+ E+ + GK P + N E
Sbjct: 178 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 220
>pdb|2FB8|A Chain A, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
pdb|2FB8|B Chain B, Structure Of The B-Raf Kinase Domain Bound To Sb-590885
Length = 281
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 29/277 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 21 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 79
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ + +V + SL LH T +A ++ + YLH+K H
Sbjct: 80 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKSII--HR 133
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA + S S ++ + + APEV D S
Sbjct: 134 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 193
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + +V + + DL +R N
Sbjct: 194 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------MVGRGYLSP--DLSKVR-SNCP 244
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+ M +L+ C + D RP ++ + IE + RS
Sbjct: 245 KAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 278
>pdb|3D4Q|A Chain A, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3D4Q|B Chain B, Pyrazole-Based Inhibitors Of B-Raf Kinase
pdb|3PSB|A Chain A, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PSB|B Chain B, Furo[2,3-C]pyridine-Based Indanone Oximes As Potent And
Selective B- Raf Inhibitors
pdb|3PPJ|A Chain A, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPJ|B Chain B, Human B-Raf Kinase In Complex With A Furopyridine
Inhibitor
pdb|3PPK|A Chain A, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PPK|B Chain B, Human B-Raf Kinase In Complex With A Non-Oxime
Furopyridine Inhibitor
pdb|3PRF|A Chain A, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRF|B Chain B, Crystal Structure Of Human B-Raf Kinase Domain In Complex
With A Non- Oxime Furopyridine Inhibitor
pdb|3PRI|A Chain A, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3PRI|B Chain B, Crystal Structure Of Human B-Raf Kinase In Complex With A
Non-Oxime Furopyridine Inhibitor
pdb|3Q4C|A Chain A, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3Q4C|B Chain B, Crystal Structure Of Wild Type Braf Kinase Domain In
Complex With Organometallic Inhibitor Cns292
pdb|3PSD|A Chain A, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3PSD|B Chain B, Non-Oxime Pyrazole Based Inhibitors Of B-Raf Kinase
pdb|3SKC|A Chain A, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3SKC|B Chain B, Human B-Raf Kinase In Complex With An Amide Linked
Pyrazolopyridine Inhibitor
pdb|3TV4|A Chain A, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV4|B Chain B, Human B-Raf Kinase Domain In Complex With An Bromopyridine
Benzamide Inhibitor
pdb|3TV6|A Chain A, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|3TV6|B Chain B, Human B-Raf Kinase Domain In Complex With A
Methoxypyrazolopyridinyl Benzamide Inhibitor
pdb|4E26|A Chain A, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E26|B Chain B, Braf In Complex With An Organic Inhibitor 7898734
pdb|4E4X|A Chain A, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4E4X|B Chain B, Crystal Structure Of B-Raf Kinase Domain In Complex With A
Dihydropyrido[2,3-D]pyrimidinone-Based Inhibitor
pdb|4G9C|A Chain A, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
pdb|4G9C|B Chain B, Human B-Raf Kinase Domain Bound To A Type Ii
Pyrazolopyridine Inhibitor
Length = 307
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 31/299 (10%)
Query: 305 FGKGDRAFDLE--DLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFRE 361
G+ D + D E D + +G G+FGT YK + V + + T + + F+
Sbjct: 22 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN 81
Query: 362 KMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG 421
++ V+ H N++ L Y ++ + +V + SL LH T
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLID 136
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG- 480
+A ++ + YLH+K H ++KS+NI L + +I DFGLA + S S ++ +
Sbjct: 137 IARQTAQGMDYLHAKSII--HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 194
Query: 481 -----YRAPEVT---DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQS 532
+ APEV D S ++DVY+FG++L EL+TG+ P + N + +
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------ 248
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+V + + DL +R N + M +L+ C + D RP ++ + IE + RS
Sbjct: 249 MVGRGYLSP--DLSKVR-SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 301
>pdb|4H58|A Chain A, Braf In Complex With Compound 3
pdb|4H58|B Chain B, Braf In Complex With Compound 3
pdb|4H58|C Chain C, Braf In Complex With Compound 3
Length = 275
Score = 76.6 bits (187), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 29/277 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 74
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ + +V + SL LH T +A ++ + YLH+K H
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKSII--HR 128
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA + S S ++ + + APEV D S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + +V + + DL +R N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------MVGRGYLSP--DLSKVR-SNCP 239
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+ M +L+ C + D RP ++ + IE + RS
Sbjct: 240 KAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 273
>pdb|2W1I|A Chain A, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
pdb|2W1I|B Chain B, Structure Determination Of Aurora Kinase In Complex With
Inhibitor
Length = 326
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 111/252 (44%), Gaps = 35/252 (13%)
Query: 301 NLVFFGKGDRAFDLEDLLRASA------EVLGKGTFGTAYKATLE-----MGIVVAVKRL 349
NL F G AF+ D + + LGKG FG+ + G VVAVK+L
Sbjct: 19 NLYFQGAMGSAFEDRDPTQFEERHLKFLQQLGKGNFGSVEMCRYDPLQDNTGEVVAVKKL 78
Query: 350 KDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS--RDEKLLVHDYMPMGSLSALL--H 404
+ T ++F ++E++ S+ H+N+V + YS R L+ +Y+P GSL L H
Sbjct: 79 QHSTEEHLRDFEREIEILKSLQHDNIVKYKGVCYSAGRRNLKLIMEYLPYGSLRDYLQKH 138
Query: 405 GNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFG 464
R L + ++ + + YL +K H ++ + NIL+ +I DFG
Sbjct: 139 KERIDHIKLLQYTSQ------ICKGMEYLGTK--RYIHRDLATRNILVENENRVKIGDFG 190
Query: 465 LAHLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT----GKA 513
L + ++ + APE K S +DV+SFGV+L EL T K+
Sbjct: 191 LTKVLPQDKEXXKVKEPGESPIFWYAPESLTESKFSVASDVWSFGVVLYELFTYIEKSKS 250
Query: 514 PTQALLNEEGVD 525
P + G D
Sbjct: 251 PPAEFMRMIGND 262
>pdb|3II5|A Chain A, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
pdb|3II5|B Chain B, The Complex Of Wild-Type B-Raf With Pyrazolo Pyrimidine
Inhibitor
Length = 306
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 136/299 (45%), Gaps = 31/299 (10%)
Query: 305 FGKGDRAFDLE--DLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFRE 361
G+ D + D E D + +G G+FGT YK + V + + T + + F+
Sbjct: 21 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN 80
Query: 362 KMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG 421
++ V+ H N++ L Y ++ + +V + SL LH T
Sbjct: 81 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLID 135
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG- 480
+A ++ + YLH+K H ++KS+NI L + +I DFGLA + S S ++ +
Sbjct: 136 IARQTAQGMDYLHAKSII--HRDLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQL 193
Query: 481 -----YRAPEVT---DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQS 532
+ APEV D S ++DVY+FG++L EL+TG+ P + N + +
Sbjct: 194 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------ 247
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+V + + DL +R N + M +L+ C + D RP ++ + IE + RS
Sbjct: 248 MVGRGYLSP--DLSKVR-SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 300
>pdb|3Q96|A Chain A, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
pdb|3Q96|B Chain B, B-Raf Kinase Domain In Complex With A
Tetrahydronaphthalene Inhibitor
Length = 282
Score = 76.3 bits (186), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 128/277 (46%), Gaps = 29/277 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 18 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 76
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ + +V + SL LH T +A ++ + YLH+K H
Sbjct: 77 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKSII--HR 130
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA + S S ++ + + APEV D S
Sbjct: 131 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 190
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + +V + + DL +R N
Sbjct: 191 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------MVGRGYLSP--DLSKVR-SNCP 241
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+ M +L+ C + D RP ++ + IE + RS
Sbjct: 242 KAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 275
>pdb|3GEN|A Chain A, The 1.6 A Crystal Structure Of Human Bruton's Tyrosine
Kinase Bound To A Pyrrolopyrimidine-Containing Compound
Length = 283
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 14/223 (6%)
Query: 306 GKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV 365
G G D +DL + LG G FG VA+K +K+ ++SE EF E+ +V
Sbjct: 15 GYGSWEIDPKDL--TFLKELGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKV 72
Query: 366 VGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG 425
+ ++ HE LV L + ++ +YM G L L R +T E +
Sbjct: 73 MMNLSHEKLVQLYGVCTKQRPIFIITEYMANGCLLNYLREMRHRFQTQQLLE----MCKD 128
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG----- 480
A+ YL SK H ++ + N L++ ++SDFGL+ + +
Sbjct: 129 VCEAMEYLESK--QFLHRDLAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVR 186
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
+ PEV K S K+D+++FGVL+ E+ + GK P + N E
Sbjct: 187 WSPPEVLMYSKFSSKSDIWAFGVLMWEIYSLGKMPYERFTNSE 229
>pdb|2QON|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Y596f:y602f:y742a Triple Mutant
Length = 373
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 71/284 (25%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V + M GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 166 MGAV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N++ V V E +
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSNQD-------VIKAVDEGY--------- 267
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 268 -RLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|4BBE|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBE|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|A Chain A, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|B Chain B, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|C Chain C, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
pdb|4BBF|D Chain D, Aminoalkylpyrimidine Inhibitor Complexes With Jak2
Length = 298
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 69/225 (30%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 19 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 78
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 79 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 132
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHL----------ASPSSTPNRIDGYRAP 484
+K H N+ + NIL+ +I DFGL + P +P I Y AP
Sbjct: 133 TK--RYIHRNLATRNILVENENRVKIGDFGLTKVLPQDKEYYKVKEPGESP--IFWY-AP 187
Query: 485 EVTDARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
E K S +DV+SFGV+L EL T K+P + G D
Sbjct: 188 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 232
>pdb|3OCS|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase In Complex
With Inhibitor Cgi1746
Length = 271
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG VA+K +K+ ++SE EF E+ +V+ ++ HE LV L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
++ +YM G L L R +T E + A+ YL SK H +
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLE----MCKDVCEAMEYLESKQFL--HRD 130
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADVY 499
+ + N L++ ++SDFGL+ + + + PEV K S K+D++
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 190
Query: 500 SFGVLLLELLT-GKAPTQALLNEE 522
+FGVL+ E+ + GK P + N E
Sbjct: 191 AFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2HEL|A Chain A, Crystal Structure Of A Mutant Epha4 Kinase Domain (Y742a)
Length = 306
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 129/283 (45%), Gaps = 37/283 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKD--VTVSEKEFREKMEVVGSMDHENLVP 376
+V+G G FG L++ I VA+K LK ++F + ++G DH N++
Sbjct: 35 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 94
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L +++ +YM GSL A L N G G+ G + YL
Sbjct: 95 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLSDM 150
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTDA 489
H ++ + NIL++ + ++SDFG++ + A+ ++ +I + APE
Sbjct: 151 SAV--HRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 208
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELL 548
RK + +DV+S+G+++ E+++ G+ P + N++ V ++E +
Sbjct: 209 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VIKAIEEGY---------- 251
Query: 549 RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + + L QL ++C + +RP ++ + ++++ R+
Sbjct: 252 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 294
>pdb|3P08|A Chain A, Crystal Structure Of The Human Btk Kinase Domain
pdb|3P08|B Chain B, Crystal Structure Of The Human Btk Kinase Domain
Length = 267
Score = 75.9 bits (185), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG VA+K +K+ ++SE EF E+ +V+ ++ HE LV L +
Sbjct: 16 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 75
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
++ +YM G L L R +T E + A+ YL SK H +
Sbjct: 76 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLE----MCKDVCEAMEYLESKQFL--HRD 129
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADVY 499
+ + N L++ ++SDFGL+ + + + PEV K S K+D++
Sbjct: 130 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 189
Query: 500 SFGVLLLELLT-GKAPTQALLNEE 522
+FGVL+ E+ + GK P + N E
Sbjct: 190 AFGVLMWEIYSLGKMPYERFTNSE 213
>pdb|3OCT|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Mutant V555r
In Complex With Dasatinib
Length = 265
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 61/207 (29%), Positives = 96/207 (46%), Gaps = 18/207 (8%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG VA+K +K+ ++SE EF E+ +V+ ++ HE LV L +
Sbjct: 17 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 76
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
++ +YM G L L R +T E + A+ YL SK H +
Sbjct: 77 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLE----MCKDVCEAMEYLESK--QFLHRD 130
Query: 445 IKSSNILLSKSYEARISDFGLAHL--------ASPSSTPNRIDGYRAPEVTDARKVSQKA 496
+ + N L++ ++SDFGL+ + S P R + PEV K S K+
Sbjct: 131 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSRGSKFPVR---WSPPEVLMYSKFSSKS 187
Query: 497 DVYSFGVLLLELLT-GKAPTQALLNEE 522
D+++FGVL+ E+ + GK P + N E
Sbjct: 188 DIWAFGVLMWEIYSLGKMPYERFTNSE 214
>pdb|2XA4|A Chain A, Inhibitors Of Jak2 Kinase Domain
pdb|2XA4|B Chain B, Inhibitors Of Jak2 Kinase Domain
Length = 298
Score = 75.9 bits (185), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQAHAERIDHIKLLQYTSQ------ICKGMEYLG 134
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 135 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
>pdb|1K2P|A Chain A, Crystal Structure Of Bruton's Tyrosine Kinase Domain
pdb|1K2P|B Chain B, Crystal Structure Of Bruton's Tyrosine Kinase Domain
Length = 263
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 58/204 (28%), Positives = 94/204 (46%), Gaps = 12/204 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG VA+K +K+ ++SE EF E+ +V+ ++ HE LV L +
Sbjct: 12 LGTGQFGVVKYGKWRGQYDVAIKMIKEGSMSEDEFIEEAKVMMNLSHEKLVQLYGVCTKQ 71
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGN 444
++ +YM G L L R +T E + A+ YL SK H +
Sbjct: 72 RPIFIITEYMANGCLLNYLREMRHRFQTQQLLE----MCKDVCEAMEYLESKQFL--HRD 125
Query: 445 IKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKVSQKADVY 499
+ + N L++ ++SDFGL+ + + + PEV K S K+D++
Sbjct: 126 LAARNCLVNDQGVVKVSDFGLSRYVLDDEYTSSVGSKFPVRWSPPEVLMYSKFSSKSDIW 185
Query: 500 SFGVLLLELLT-GKAPTQALLNEE 522
+FGVL+ E+ + GK P + N E
Sbjct: 186 AFGVLMWEIYSLGKMPYERFTNSE 209
>pdb|2HEN|A Chain A, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|B Chain B, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|C Chain C, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
pdb|2HEN|D Chain D, Crystal Structure Of The Ephb2 Receptor Kinase Domain In
Complex With Adp
Length = 286
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 63/285 (22%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKD--VTVSEKEFREKMEVVGSMDHENLVP 376
+V+G G FG L++ I VA+K LK ++F + ++G DH N++
Sbjct: 13 QVIGAGEFGEVCSGHLKLPGKREIFVAIKTLKSGYTEKQRRDFLSEASIMGQFDHPNVIH 72
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L +++ ++M GSL + L N G G+ G + + YL
Sbjct: 73 LEGVVTKSTPVMIITEFMENGSLDSFLRQNDGQ----FTVIQLVGMLRGIAAGMKYLADM 128
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNRIDG--------YRAPEVT 487
H + + NIL++ + ++SDFGL+ L +S P + APE
Sbjct: 129 NYV--HRALAARNILVNSNLVCKVSDFGLSRFLEDDTSDPTYTSALGGKIPIRWTAPEAI 186
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLE 546
RK + +DV+S+G+++ E+++ G+ P + N++ V + +++++
Sbjct: 187 QYRKFTSASDVWSYGIVMWEVMSYGERPYWDMTNQD-------VINAIEQDY-------- 231
Query: 547 LLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + ++RP ++ + ++++ R+
Sbjct: 232 --RLPPPMDCPSALHQLMLDCWQKDRNHRPKFGQIVNTLDKMIRN 274
>pdb|2XYU|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Vuf 12058
Length = 285
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 37/283 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKD--VTVSEKEFREKMEVVGSMDHENLVP 376
+V+G G FG L++ I VA+K LK ++F + ++G DH N++
Sbjct: 14 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 73
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L +++ +YM GSL A L N G G+ G + YL
Sbjct: 74 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLSDM 129
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTDA 489
+ H ++ + NIL++ + ++SDFG++ + A+ ++ +I + APE
Sbjct: 130 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 187
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELL 548
RK + +DV+S+G+++ E+++ G+ P + N++ V ++E +
Sbjct: 188 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VIKAIEEGY---------- 230
Query: 549 RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + + L QL ++C + +RP ++ + ++++ R+
Sbjct: 231 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 273
>pdb|3LPB|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3LPB|B Chain B, Crystal Structure Of Jak2 Complexed With A Potent
2,8-Diaryl Quinoxaline Inhibitor
pdb|3KRR|A Chain A, Crystal Structure Of Jak2 Complexed With A Potent
Quinoxaline Atp Site Inhibitor
Length = 295
Score = 75.5 bits (184), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 131
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 132 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
>pdb|2B7A|A Chain A, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|2B7A|B Chain B, The Structural Basis Of Janus Kinase 2 Inhibition By A
Potent And Specific Pan-Janus Kinase Inhibitor
pdb|3FUP|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3FUP|B Chain B, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 293
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 16 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 75
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 76 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 129
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 130 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 187
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 188 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 229
>pdb|2QOB|A Chain A, Human Epha3 Kinase Domain, Base Structure
Length = 344
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 22 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V + M GSL + L A T + G+ G + + YL
Sbjct: 81 RLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 136
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 137 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 194
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 195 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 237
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 238 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 281
>pdb|3Q32|A Chain A, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
pdb|3Q32|B Chain B, Structure Of Janus Kinase 2 With A Pyrrolotriazine
Inhibitor
Length = 301
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 131
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 132 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 189
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 190 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
>pdb|3RVG|A Chain A, Crystals Structure Of Jak2 With A
1-Amino-5h-Pyrido[4,3-B]indol-4- Carboxamide Inhibitor
Length = 303
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 22 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 81
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 82 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 135
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 136 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 193
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 194 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 235
>pdb|2Y6M|A Chain A, Crystal Structure Of Epha4 Kinase Domain
pdb|2Y6O|A Chain A, Crystal Structure Of Epha4 Kinase Domain In Complex With
Dasatinib
Length = 291
Score = 75.1 bits (183), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 64/283 (22%), Positives = 130/283 (45%), Gaps = 37/283 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKD--VTVSEKEFREKMEVVGSMDHENLVP 376
+V+G G FG L++ I VA+K LK ++F + ++G DH N++
Sbjct: 20 KVIGVGEFGEVCSGRLKVPGKREICVAIKTLKAGYTDKQRRDFLSEASIMGQFDHPNIIH 79
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L +++ +YM GSL A L N G G+ G + YL
Sbjct: 80 LEGVVTKCKPVMIITEYMENGSLDAFLRKNDGR----FTVIQLVGMLRGIGSGMKYLSDM 135
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTDA 489
+ H ++ + NIL++ + ++SDFG++ + A+ ++ +I + APE
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGMSRVLEDDPEAAYTTRGGKIPIRWTAPEAIAY 193
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELL 548
RK + +DV+S+G+++ E+++ G+ P + N++ V ++E +
Sbjct: 194 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQD-------VIKAIEEGY---------- 236
Query: 549 RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + + L QL ++C + +RP ++ + ++++ R+
Sbjct: 237 RLPPPMDCPIALHQLMLDCWQKERSDRPKFGQIVNMLDKLIRN 279
>pdb|4E4M|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|D Chain D, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4M|E Chain E, Jak2 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4F08|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F08|B Chain B, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
pdb|4F09|A Chain A, Discovery And Optimization Of C-2 Methyl
Imidazo-Pyrrolopyridines As Potent And Orally
Bioavailable Jak1 Inhibitors With Selectivity Over Jak2
Length = 302
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 25 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 84
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 85 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 138
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 139 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 196
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 197 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 238
>pdb|4HGE|A Chain A, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
pdb|4HGE|B Chain B, Jak2 Kinase (Jh1 Domain) In Complex With Compound 8
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 23 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 82
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 83 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 136
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 137 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 194
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 195 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 236
>pdb|3TJC|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJC|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 8
pdb|3TJD|A Chain A, Co-Crystal Structure Of Jak2 With Thienopyridine 19
pdb|3TJD|B Chain B, Co-Crystal Structure Of Jak2 With Thienopyridine 19
Length = 298
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 134
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 135 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
>pdb|4AQC|A Chain A, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
pdb|4AQC|B Chain B, Triazolopyridine-Based Inhibitor Of Janus Kinase 2
Length = 301
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 24 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 83
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 84 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 137
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 138 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 195
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 196 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 237
>pdb|3JY9|A Chain A, Janus Kinase 2 Inhibitors
Length = 311
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 150 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 249
>pdb|3E62|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E63|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
pdb|3E64|A Chain A, Fragment Based Discovery Of Jak-2 Inhibitors
Length = 293
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 17 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 76
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 77 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 130
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 131 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 188
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 189 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 230
>pdb|3IO7|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3IOK|A Chain A, 2-Aminopyrazolo[1,5-A]pyrimidines As Potent And Selective
Inhibitors Of Jak2
pdb|3KCK|A Chain A, A Novel Chemotype Of Kinase Inhibitors
Length = 313
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 64/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 36 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 95
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 96 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 150 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 207
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 208 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 249
>pdb|1UWH|A Chain A, The Complex Of Wild Type B-Raf And Bay439006
pdb|1UWH|B Chain B, The Complex Of Wild Type B-Raf And Bay439006
Length = 276
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 29/277 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 74
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ +V + SL LH T +A ++ + YLH+K H
Sbjct: 75 APQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKSII--HR 128
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA + S S ++ + + APEV D S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATVKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + +V + + DL +R N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------MVGRGYLSP--DLSKVR-SNCP 239
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+ M +L+ C + D RP ++ + IE + RS
Sbjct: 240 KAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 273
>pdb|3IDP|A Chain A, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
pdb|3IDP|B Chain B, B-Raf V600e Kinase Domain In Complex With An
Aminoisoquinoline Inhibitor
Length = 300
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 305 FGKGDRAFDLE--DLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFRE 361
G+ D + D E D + +G G+FGT YK + V + + T + + F+
Sbjct: 14 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN 73
Query: 362 KMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG 421
++ V+ H N++ L Y ++ + +V + SL LH T
Sbjct: 74 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLID 128
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG- 480
+A ++ + YLH+K H ++KS+NI L + +I DFGLA S S ++ +
Sbjct: 129 IARQTAQGMDYLHAKSII--HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 186
Query: 481 -----YRAPEVT---DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQS 532
+ APEV D S ++DVY+FG++L EL+TG+ P + N + +
Sbjct: 187 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------ 240
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+V + + DL +R N + M +L+ C + D RP ++ + IE + RS
Sbjct: 241 MVGRGYLSP--DLSKVR-SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 293
>pdb|4F1O|A Chain A, Crystal Structure Of The L1180t Mutant Roco4 Kinase Domain
From D. Discoideum Bound To Appcp
Length = 287
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 41/251 (16%)
Query: 325 LGKGTFGTAYKATL-EMGIVVAVKRL--------KDVTVSEKEFREKMEVVGSMDHENLV 375
+GKG FG +K L + VVA+K L ++ +EF+ ++ ++ +++H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L Y + +V +++P G L L P+ W + L L + I Y+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 436 KGPANSHGNIKSSNILLSKSYE-----ARISDFGLAHLASPSSTPNRIDGYR--APEVTD 488
+ P H +++S NI L E A+++DFG + S S + ++ APE
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFGTSQ-QSVHSVSGLLGNFQWMAPETIG 199
Query: 489 ARKVS--QKADVYSFGVLLLELLTGKAPTQA----------LLNEEGV------DLPRWV 530
A + S +KAD YSF ++L +LTG+ P ++ EEG+ D P +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 531 QSVVKEEWTAE 541
++V++ W+ +
Sbjct: 260 RNVIELCWSGD 270
>pdb|4AF3|A Chain A, Human Aurora B Kinase In Complex With Incenp And Vx-680
Length = 292
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 102/221 (46%), Gaps = 18/221 (8%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVS----EKEFREKME 364
R F ++D LGKG FG Y A + +VA+K L + E + R ++E
Sbjct: 18 RHFTIDDF--EIGRPLGKGKFGNVYLAREKKSHFIVALKVLFKSQIEKEGVEHQLRREIE 75
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ L Y+Y R L+ +Y P G L L + ++ + +
Sbjct: 76 IQAHLHHPNILRLYNYFYDRRRIYLILEYAPRGELYKELQKS-------CTFDEQRTATI 128
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---Y 481
A A ++ G H +IK N+LL E +I+DFG + + +PS + G Y
Sbjct: 129 MEELADALMYCHGKKVIHRDIKPENLLLGLKGELKIADFGWS-VHAPSLRRKTMCGTLDY 187
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
PE+ + R ++K D++ GVL ELL G P ++ + E
Sbjct: 188 LPPEMIEGRMHNEKVDLWCIGVLCYELLVGNPPFESASHNE 228
>pdb|3UGC|A Chain A, Structural Basis Of Jak2 Inhibition By The Type Ii
Inhibtor Nvp-Bbt594
Length = 295
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 68/225 (30%), Positives = 103/225 (45%), Gaps = 35/225 (15%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 18 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 77
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +Y+P GSL L H R L + ++ + + YL
Sbjct: 78 GVCYSAGRRNLKLIMEYLPYGSLRDYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 131
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHL----------ASPSSTPNRIDGYRAP 484
+K H ++ + NIL+ +I DFGL + P +P I Y AP
Sbjct: 132 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEFFKVKEPGESP--IFWY-AP 186
Query: 485 EVTDARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
E K S +DV+SFGV+L EL T K+P + G D
Sbjct: 187 ESLTESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 231
>pdb|2QO7|A Chain A, Human Epha3 Kinase And Juxtamembrane Region,
Dephosphorylated, Amp-Pnp Bound
pdb|2QOQ|A Chain A, Human Epha3 Kinase And Juxtamembrane Region, Base, Amp-Pnp
Bound Structure
Length = 373
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/284 (25%), Positives = 134/284 (47%), Gaps = 39/284 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLV 375
+V+G G FG L++ I VA+K LK V +EK+ R+ + ++G DH N++
Sbjct: 51 KVVGAGEFGEVCSGRLKLPSKKEISVAIKTLK-VGYTEKQRRDFLGEASIMGQFDHPNII 109
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++V + M GSL + L A T + G+ G + + YL
Sbjct: 110 RLEGVVTKSKPVMIVTEXMENGSLDSFLR-KHDAQFTVIQ---LVGMLRGIASGMKYLSD 165
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTD 488
G H ++ + NIL++ + ++SDFGL+ + A+ ++ +I + +PE
Sbjct: 166 MGYV--HRDLAARNILINSNLVCKVSDFGLSRVLEDDPEAAYTTRGGKIPIRWTSPEAIA 223
Query: 489 ARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
RK + +DV+S+G++L E+++ G+ P + N Q V+K D E
Sbjct: 224 YRKFTSASDVWSYGIVLWEVMSYGERPYWEMSN----------QDVIK------AVD-EG 266
Query: 548 LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + +NRP ++ S ++++ R+
Sbjct: 267 YRLPPPMDCPAALYQLMLDCWQKDRNNRPKFEQIVSILDKLIRN 310
>pdb|1UWJ|A Chain A, The Complex Of Mutant V599e B-raf And Bay439006
pdb|1UWJ|B Chain B, The Complex Of Mutant V599e B-raf And Bay439006
Length = 276
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 73/277 (26%), Positives = 127/277 (45%), Gaps = 29/277 (10%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLRAYYYS 383
+G G+FGT YK + V + + T + + F+ ++ V+ H N++ L Y +
Sbjct: 16 IGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKNEVGVLRKTRHVNIL-LFMGYST 74
Query: 384 RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHG 443
+ + +V + SL LH T +A ++ + YLH+K H
Sbjct: 75 KPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLIDIARQTAQGMDYLHAKSII--HR 128
Query: 444 NIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVT---DARKVSQ 494
++KS+NI L + +I DFGLA S S ++ + + APEV D S
Sbjct: 129 DLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQLSGSILWMAPEVIRMQDKNPYSF 188
Query: 495 KADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
++DVY+FG++L EL+TG+ P + N + + +V + + DL +R N
Sbjct: 189 QSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------MVGRGYLSP--DLSKVR-SNCP 239
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+ M +L+ C + D RP ++ + IE + RS
Sbjct: 240 KAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 273
>pdb|4G9R|A Chain A, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
pdb|4G9R|B Chain B, B-Raf V600e Kinase Domain Bound To A Type Ii
Dihydroquinazoline Inhibitor
Length = 307
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 78/299 (26%), Positives = 135/299 (45%), Gaps = 31/299 (10%)
Query: 305 FGKGDRAFDLE--DLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE-KEFRE 361
G+ D + D E D + +G G+FGT YK + V + + T + + F+
Sbjct: 22 LGRRDSSDDWEIPDGQITVGQRIGSGSFGTVYKGKWHGDVAVKMLNVTAPTPQQLQAFKN 81
Query: 362 KMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG 421
++ V+ H N++ L Y ++ + +V + SL LH T
Sbjct: 82 EVGVLRKTRHVNIL-LFMGYSTKPQLAIVTQWCEGSSLYHHLH----IIETKFEMIKLID 136
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG- 480
+A ++ + YLH+K H ++KS+NI L + +I DFGLA S S ++ +
Sbjct: 137 IARQTAQGMDYLHAKSII--HRDLKSNNIFLHEDLTVKIGDFGLATEKSRWSGSHQFEQL 194
Query: 481 -----YRAPEVT---DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQS 532
+ APEV D S ++DVY+FG++L EL+TG+ P + N + +
Sbjct: 195 SGSILWMAPEVIRMQDKNPYSFQSDVYAFGIVLYELMTGQLPYSNINNRDQIIF------ 248
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+V + + DL +R N + M +L+ C + D RP ++ + IE + RS
Sbjct: 249 MVGRGYLSP--DLSKVR-SNCPKAMKRLMA---ECLKKKRDERPLFPQILASIELLARS 301
>pdb|4F1M|A Chain A, Crystal Structure Of The G1179s Roco4 Kinase Domain Bound
To Appcp From D. Discoideum
Length = 287
Score = 74.7 bits (182), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/251 (26%), Positives = 119/251 (47%), Gaps = 41/251 (16%)
Query: 325 LGKGTFGTAYKATL-EMGIVVAVKRL--------KDVTVSEKEFREKMEVVGSMDHENLV 375
+GKG FG +K L + VVA+K L ++ +EF+ ++ ++ +++H N+V
Sbjct: 27 IGKGGFGLVHKGRLVKDKSVVAIKSLILGDSEGETEMIEKFQEFQREVFIMSNLNHPNIV 86
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L Y + +V +++P G L L P+ W + L L + I Y+ +
Sbjct: 87 KL--YGLMHNPPRMVMEFVPCGDLYHRLLDKA----HPIKWSVKLRLMLDIALGIEYMQN 140
Query: 436 KGPANSHGNIKSSNILLSKSYE-----ARISDFGLAHLASPSSTPNRIDGYR--APEVTD 488
+ P H +++S NI L E A+++DF L+ S S + ++ APE
Sbjct: 141 QNPPIVHRDLRSPNIFLQSLDENAPVCAKVADFSLSQ-QSVHSVSGLLGNFQWMAPETIG 199
Query: 489 ARKVS--QKADVYSFGVLLLELLTGKAPTQA----------LLNEEGV------DLPRWV 530
A + S +KAD YSF ++L +LTG+ P ++ EEG+ D P +
Sbjct: 200 AEEESYTEKADTYSFAMILYTILTGEGPFDEYSYGKIKFINMIREEGLRPTIPEDCPPRL 259
Query: 531 QSVVKEEWTAE 541
++V++ W+ +
Sbjct: 260 RNVIELCWSGD 270
>pdb|3KEX|A Chain A, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
pdb|3KEX|B Chain B, Crystal Structure Of The Catalytically Inactive Kinase
Domain Of The Human Epidermal Growth Factor Receptor 3
(Her3)
Length = 325
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 31/223 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVT--VSEKEFREKMEVVGSMDHENLV 375
+VLG G FGT +K + I V +K ++D + S + + M +GS+DH ++V
Sbjct: 19 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 78
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA--GRTPLNWETRSGLALGASRAIAYL 433
L +L V Y+P+GSL + +RGA + LNW + ++ + YL
Sbjct: 79 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 131
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASP---------SSTPNRIDGYRAP 484
G H N+ + N+LL + +++DFG+A L P + TP + + A
Sbjct: 132 EEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMAL 186
Query: 485 EVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
E K + ++DV+S+GV + EL+T G P L E DL
Sbjct: 187 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 229
>pdb|3LMG|A Chain A, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
pdb|3LMG|B Chain B, Crystal Structure Of The Erbb3 Kinase Domain In Complex
With Amp-Pnp
Length = 344
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/223 (29%), Positives = 107/223 (47%), Gaps = 31/223 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVT--VSEKEFREKMEVVGSMDHENLV 375
+VLG G FGT +K + I V +K ++D + S + + M +GS+DH ++V
Sbjct: 37 KVLGSGVFGTVHKGVWIPEGESIKIPVCIKVIEDKSGRQSFQAVTDHMLAIGSLDHAHIV 96
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA--GRTPLNWETRSGLALGASRAIAYL 433
L +L V Y+P+GSL + +RGA + LNW + ++ + YL
Sbjct: 97 RLLGLCPGSSLQL-VTQYLPLGSLLDHVRQHRGALGPQLLLNW------GVQIAKGMYYL 149
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASP---------SSTPNRIDGYRAP 484
G H N+ + N+LL + +++DFG+A L P + TP + + A
Sbjct: 150 EEHG--MVHRNLAARNVLLKSPSQVQVADFGVADLLPPDDKQLLYSEAKTPIK---WMAL 204
Query: 485 EVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
E K + ++DV+S+GV + EL+T G P L E DL
Sbjct: 205 ESIHFGKYTHQSDVWSYGVTVWELMTFGAEPYAGLRLAEVPDL 247
>pdb|4ASZ|A Chain A, Crystal Structure Of Apo Trkb Kinase Domain
pdb|4AT3|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Cpd5n
pdb|4AT4|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Ex429
pdb|4AT5|A Chain A, Crystal Structure Of Trkb Kinase Domain In Complex With
Gw2580
Length = 299
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 61/222 (27%), Positives = 102/222 (45%), Gaps = 22/222 (9%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKDVTV-SEKEFREKMEVVGSMDHENLVPL 377
LG+G FG + A + I+VAVK LKD + + K+F + E++ ++ HE++V
Sbjct: 21 LGEGAFGKVFLAECYNLCPEQDKILVAVKTLKDASDNARKDFHREAELLTNLQHEHIVKF 80
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGA----GRTPLNWETRSGLALGASRAIA 431
D ++V +YM G L+ L HG G P L + A
Sbjct: 81 YGVCVEGDPLIMVFEYMKHGDLNKFLRAHGPDAVLMAEGNPPTELTQSQMLHIAQQIAAG 140
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAP 484
++ H ++ + N L+ ++ +I DFG++ S+ R+ G + P
Sbjct: 141 MVYLASQHFVHRDLATRNCLVGENLLVKIGDFGMSRDVY-STDYYRVGGHTMLPIRWMPP 199
Query: 485 EVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD 525
E RK + ++DV+S GV+L E+ T GK P L N E ++
Sbjct: 200 ESIMYRKFTTESDVWSLGVVLWEIFTYGKQPWYQLSNNEVIE 241
>pdb|4E6D|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6D|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 7
pdb|4E6Q|A Chain A, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
pdb|4E6Q|B Chain B, Jak2 Kinase (Jh1 Domain) Triple Mutant In Complex With
Compound 12
Length = 298
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 101/222 (45%), Gaps = 29/222 (13%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSE-KEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G VVAVK+L+ T ++F ++E++ S+ H+N+V +
Sbjct: 21 LGKGNFGSVEMCRYDPLQDNTGEVVAVKKLQHSTEEHLRDFEREIEILKSLQHDNIVKYK 80
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
YS R L+ +++P GSL L H R L + ++ + + YL
Sbjct: 81 GVCYSAGRRNLKLIMEFLPYGSLREYLQKHKERIDHIKLLQYTSQ------ICKGMEYLG 134
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT 487
+K H ++ + NIL+ +I DFGL + ++ + APE
Sbjct: 135 TK--RYIHRDLATRNILVENENRVKIGDFGLTKVLPQDKEXXKVKEPGESPIFWYAPESL 192
Query: 488 DARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVD 525
K S +DV+SFGV+L EL T K+P + G D
Sbjct: 193 TESKFSVASDVWSFGVVLYELFTYIEKSKSPPAEFMRMIGND 234
>pdb|2REI|A Chain A, Kinase Domain Of Human Ephrin Type-a Receptor 7 (epha7)
pdb|3DKO|A Chain A, Complex Between The Kinase Domain Of Human Ephrin Type-A
Receptor 7 (Epha7) And Inhibitor Alw-Ii-49-7
Length = 318
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 110/226 (48%), Gaps = 29/226 (12%)
Query: 324 VLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVP 376
V+G G FG L++ + VA+K LK V +EK+ R+ + ++G DH N+V
Sbjct: 50 VIGAGEFGEVCSGRLKLPGKRDVAVAIKTLK-VGYTEKQRRDFLCEASIMGQFDHPNVVH 108
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++V ++M G+L A L + G G+ G + + YL
Sbjct: 109 LEGVVTRGKPVMIVIEFMENGALDAFLRKHDGQ----FTVIQLVGMLRGIAAGMRYLADM 164
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHL------ASPSSTPNRID-GYRAPEVTDA 489
G H ++ + NIL++ + ++SDFGL+ + A ++T +I + APE
Sbjct: 165 G--YVHRDLAARNILVNSNLVCKVSDFGLSRVIEDDPEAVYTTTGGKIPVRWTAPEAIQY 222
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLN-------EEGVDLP 527
RK + +DV+S+G+++ E+++ G+ P + N EEG LP
Sbjct: 223 RKFTSASDVWSYGIVMWEVMSYGERPYWDMSNQDVIKAIEEGYRLP 268
>pdb|2F57|A Chain A, Crystal Structure Of The Human P21-activated Kinase 5
pdb|2F57|B Chain B, Crystal Structure Of The Human P21-activated Kinase 5
Length = 317
Score = 73.9 bits (180), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/200 (29%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--HENLVPLRA 379
+G+G+ G AT G VAVK++ + +++ RE + EVV D H+N+V + +
Sbjct: 53 IGEGSTGIVCIATEKHTGKQVAVKKMD---LRKQQRRELLFNEVVIMRDYHHDNVVDMYS 109
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y DE +V +++ G+L+ ++ R +N E + + L RA++YLH++G
Sbjct: 110 SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIATVCLSVLRALSYLHNQGVI 163
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEVTDARKVSQ 494
H +IKS +ILL+ ++SDFG S P R + APEV
Sbjct: 164 --HRDIKSDSILLTSDGRIKLSDFGFCAQVS-KEVPKRKXLVGTPYWMAPEVISRLPYGT 220
Query: 495 KADVYSFGVLLLELLTGKAP 514
+ D++S G++++E++ G+ P
Sbjct: 221 EVDIWSLGIMVIEMIDGEPP 240
>pdb|3D7T|A Chain A, Structural Basis For The Recognition Of C-Src By Its
Inactivator Csk
Length = 269
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 62/195 (31%), Positives = 96/195 (49%), Gaps = 10/195 (5%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
+ +GKG FG G VAVK +K+ + + F + V+ + H NLV L
Sbjct: 18 QTIGKGEFGDVMLGDYR-GNKVAVKCIKN-DATAQAFLAEASVMTQLRHSNLVQLLGVIV 75
Query: 383 SRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
L +V +YM GSL L R GR+ L + +L A+ YL +G
Sbjct: 76 EEKGGLYIVTEYMAKGSLVDYL---RSRGRSVLGGDCLLKFSLDVCEAMEYL--EGNNFV 130
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-GYRAPEVTDARKVSQKADVYS 500
H ++ + N+L+S+ A++SDFGL AS + ++ + APE S K+DV+S
Sbjct: 131 HRDLAARNVLVSEDNVAKVSDFGLTKEASSTQDTGKLPVKWTAPEALREAAFSTKSDVWS 190
Query: 501 FGVLLLELLT-GKAP 514
FG+LL E+ + G+ P
Sbjct: 191 FGILLWEIYSFGRVP 205
>pdb|3QTI|A Chain A, C-Met Kinase In Complex With Nvp-Bvu972
pdb|3QTI|B Chain B, C-Met Kinase In Complex With Nvp-Bvu972
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + +L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 151
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 152 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK---WMAL 206
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 250
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
L+ R E L ++ + C + RPS +E+ S+I I + + + H
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 305
>pdb|3COM|A Chain A, Crystal Structure Of Mst1 Kinase
pdb|3COM|B Chain B, Crystal Structure Of Mst1 Kinase
Length = 314
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 56/197 (28%), Positives = 101/197 (51%), Gaps = 12/197 (6%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E LG+G++G+ YKA E G +VA+K++ V +E +++ ++ D ++V Y
Sbjct: 35 EKLGEGSYGSVYKAIHKETGQIVAIKQVP-VESDLQEIIKEISIMQQCDSPHVVKYYGSY 93
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+ + +V +Y GS+S ++ R +T L + + + + + YLH
Sbjct: 94 FKNTDLWIVMEYCGAGSVSDII---RLRNKT-LTEDEIATILQSTLKGLEYLHFM--RKI 147
Query: 442 HGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDG---YRAPEVTDARKVSQKAD 497
H +IK+ NILL+ A+++DFG+A L + N + G + APEV + AD
Sbjct: 148 HRDIKAGNILLNTEGHAKLADFGVAGQLTDXMAKRNXVIGTPFWMAPEVIQEIGYNCVAD 207
Query: 498 VYSFGVLLLELLTGKAP 514
++S G+ +E+ GK P
Sbjct: 208 IWSLGITAIEMAEGKPP 224
>pdb|3DKG|A Chain A, Sgx Clone 5698a109kfg1h1
Length = 317
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + +L S
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 152
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 153 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMLDKEFDSVHNKTGAKLPVK---WMAL 207
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 251
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
L+ R E L ++ + C + RPS +E+ S+I I + + + H
Sbjct: 252 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 306
>pdb|3Q6W|A Chain A, Structure Of Dually-phosphorylated Met Receptor Kinase In
Complex With An Mk-2461 Analog With Specificity For The
Activated Receptor
pdb|3R7O|A Chain A, Structure Of Dually Phosphorylated C-Met Receptor Kinase
In Complex With An Mk-2461 Analog
Length = 307
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 150
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 151 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEXXSVHNKTGAKLPVK---WMAL 205
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 249
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 250 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|1U5Q|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5Q|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|A Chain A, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
pdb|1U5R|B Chain B, Crystal Structure Of The Tao2 Kinase Domain: Activation
And Specifity Of A Ste20p Map3k
Length = 348
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRA 379
+G G+FG Y A + VVA+K++ K ++ +++ + + H N + R
Sbjct: 62 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 121
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y LV +Y +GS S LL + PL + + GA + +AYLHS
Sbjct: 122 CYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSHN-- 174
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAPEVT---DARKVSQKA 496
H ++K+ NILLS+ ++ DFG A + +P++ + APEV D + K
Sbjct: 175 MIHRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 234
Query: 497 DVYSFGVLLLELLTGKAP 514
DV+S G+ +EL K P
Sbjct: 235 DVWSLGITCIELAERKPP 252
>pdb|2Q0N|A Chain A, Structure Of Human P21 Activating Kinase 4 (Pak4) In
Complex With A Consensus Peptide
Length = 301
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--HENLVPLRA 379
+G+G+ G AT+ G +VAVK++ + +++ RE + EVV D HEN+V +
Sbjct: 37 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 93
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y DE +V +++ G+L+ ++ R +N E + + L +A++ LH++G
Sbjct: 94 SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI 147
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEVTDARKVSQ 494
H +IKS +ILL+ ++SDFG S P R + APE+
Sbjct: 148 --HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGP 204
Query: 495 KADVYSFGVLLLELLTGKAP 514
+ D++S G++++E++ G+ P
Sbjct: 205 EVDIWSLGIMVIEMVDGEPP 224
>pdb|2CDZ|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Cgp74514a
pdb|2J0I|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 303
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--HENLVPLRA 379
+G+G+ G AT+ G +VAVK++ + +++ RE + EVV D HEN+V +
Sbjct: 39 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 95
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y DE +V +++ G+L+ ++ R +N E + + L +A++ LH++G
Sbjct: 96 SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI 149
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEVTDARKVSQ 494
H +IKS +ILL+ ++SDFG S P R + APE+
Sbjct: 150 --HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGP 206
Query: 495 KADVYSFGVLLLELLTGKAP 514
+ D++S G++++E++ G+ P
Sbjct: 207 EVDIWSLGIMVIEMVDGEPP 226
>pdb|2BVA|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4
pdb|2BVA|B Chain B, Crystal Structure Of The Human P21-Activated Kinase 4
Length = 292
Score = 71.6 bits (174), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--HENLVPLRA 379
+G+G+ G AT+ G +VAVK++ + +++ RE + EVV D HEN+V +
Sbjct: 28 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 84
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y DE +V +++ G+L+ ++ R +N E + + L +A++ LH++G
Sbjct: 85 SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI 138
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEVTDARKVSQ 494
H +IKS +ILL+ ++SDFG S P R + APE+
Sbjct: 139 --HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGP 195
Query: 495 KADVYSFGVLLLELLTGKAP 514
+ D++S G++++E++ G+ P
Sbjct: 196 EVDIWSLGIMVIEMVDGEPP 215
>pdb|2X4Z|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With Pf-03758309
pdb|4APP|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 4 In
Complex With (S)-N-(5-(3-Benzyl-1-Methylpiperazine-4-
Carbonyl)-6,6-Dimethyl-1,4,5,6-Tetrahydropyrrolo(3,4-C)
Pyrazol-3-Yl)-3-Phenoxybenzamide
Length = 296
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--HENLVPLRA 379
+G+G+ G AT+ G +VAVK++ + +++ RE + EVV D HEN+V +
Sbjct: 32 IGEGSTGIVCIATVRSSGKLVAVKKMD---LRKQQRRELLFNEVVIMRDYQHENVVEMYN 88
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y DE +V +++ G+L+ ++ R +N E + + L +A++ LH++G
Sbjct: 89 SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQGVI 142
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEVTDARKVSQ 494
H +IKS +ILL+ ++SDFG S P R + APE+
Sbjct: 143 --HRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGP 199
Query: 495 KADVYSFGVLLLELLTGKAP 514
+ D++S G++++E++ G+ P
Sbjct: 200 EVDIWSLGIMVIEMVDGEPP 219
>pdb|3DKC|A Chain A, Sgx Clone 5698a65kfg1h1
pdb|3DKF|A Chain A, Sgx Clone 5698a65kfg1h1
Length = 317
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 37 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 96
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + +L S
Sbjct: 97 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 152
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 153 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK---WMAL 207
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 208 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 251
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
L+ R E L ++ + C + RPS +E+ S+I I + + + H
Sbjct: 252 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 306
>pdb|3CTH|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CTJ|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Aminopyridine Based Inhibitor
pdb|3CE3|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolopyridinepyridone Based Inhibitor
pdb|3F82|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
N-
(4-(2-Amino-3-Chloropyridin-4-Yloxy)-3-Fluorophenyl)-4-
Ethoxy-1-(4-Fluorophenyl)-2-Oxo-1,2-Dihydropyridine-3-
Carboxamide
pdb|3L8V|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepat Growth Factor Receptor C-Met In Complex With A
Biarylamine Inhibitor
Length = 314
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + +L S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 151
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 152 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK---WMAL 206
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 250
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
L+ R E L ++ + C + RPS +E+ S+I I + + + H
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 305
>pdb|2G15|A Chain A, Structural Characterization Of Autoinhibited C-Met Kinase
pdb|3RHK|A Chain A, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
pdb|3RHK|B Chain B, Crystal Structure Of The Catalytic Domain Of C-Met Kinase
In Complex With Arq 197
Length = 318
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 54 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 113
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 114 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 169
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 170 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 224
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 225 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 268
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 269 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 312
>pdb|1R0P|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
The Microbial Alkaloid K-252a
pdb|1R1W|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met
Length = 312
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + +L S
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 149
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 150 KKFV--HRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK---WMAL 204
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 248
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
L+ R E L ++ + C + RPS +E+ S+I I + + + H
Sbjct: 249 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 303
>pdb|2GCD|A Chain A, Tao2 Kinase Domain-Staurosporine Structure
pdb|2GCD|B Chain B, Tao2 Kinase Domain-Staurosporine Structure
Length = 309
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 58/198 (29%), Positives = 94/198 (47%), Gaps = 15/198 (7%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRA 379
+G G+FG Y A + VVA+K++ K ++ +++ + + H N + R
Sbjct: 23 IGHGSFGAVYFARDVRNSEVVAIKKMSYSGKQSNEKWQDIIKEVRFLQKLRHPNTIQYRG 82
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y LV +Y +GS S LL + PL + + GA + +AYLHS
Sbjct: 83 CYLREHTAWLVMEYC-LGSASDLLE----VHKKPLQEVEIAAVTHGALQGLAYLHSHNMI 137
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAPEVT---DARKVSQKA 496
H ++K+ NILLS+ ++ DFG A + +P++ + APEV D + K
Sbjct: 138 --HRDVKAGNILLSEPGLVKLGDFGSASIMAPANXFVGTPYWMAPEVILAMDEGQYDGKV 195
Query: 497 DVYSFGVLLLELLTGKAP 514
DV+S G+ +EL K P
Sbjct: 196 DVWSLGITCIELAERKPP 213
>pdb|3C1X|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Hepatocyte Growth Factor Receptor C-Met In Complex With
A Pyrrolotriazine Based Inhibitor
Length = 373
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 95 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 154
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + +L S
Sbjct: 155 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 210
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 211 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK---WMAL 265
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 266 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 309
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
L+ R E L ++ + C + RPS +E+ S+I I + + + H
Sbjct: 310 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 364
>pdb|2WD1|A Chain A, Human C-Met Kinase In Complex With Azaindole Inhibitor
Length = 292
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 28 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 87
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 88 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 143
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 144 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 198
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 199 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 242
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 243 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 286
>pdb|3A4P|A Chain A, Human C-Met Kinase Domain Complexed With
6-Benzyloxyquinoline Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 76/295 (25%), Positives = 125/295 (42%), Gaps = 43/295 (14%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 41 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 100
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + +L S
Sbjct: 101 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKFLAS 156
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 157 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEFDSVHNKTGAKLPVK---WMAL 211
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 212 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 255
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQGQAH 599
L+ R E L ++ + C + RPS +E+ S+I I + + + H
Sbjct: 256 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAIFSTFIGEHYVH 310
>pdb|4GG5|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
pdb|4GG7|A Chain A, Crystal Structure Of Cmet In Complex With Novel Inhibitor
Length = 319
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 55 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 114
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 115 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 170
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 171 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 225
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 226 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 269
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 270 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 313
>pdb|3LQ8|A Chain A, Structure Of The Kinase Domain Of C-Met Bound To Xl880
(Gsk1
Length = 302
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 34 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 93
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 94 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 149
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 150 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 204
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 205 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 248
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 249 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 292
>pdb|3Q6U|A Chain A, Structure Of The Apo Met Receptor Kinase In The
Dually-Phosphorylated, Activated State
Length = 308
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 151
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 152 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 206
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 250
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|3V5Q|A Chain A, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
pdb|3V5Q|B Chain B, Discovery Of A Selective Trk Inhibitor With Efficacy In
Rodent Cancer Tumor Models
Length = 297
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 61/227 (26%), Positives = 108/227 (47%), Gaps = 29/227 (12%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKDVTVS-EKEFREKMEVVGSMDHENLVPL 377
LG+G FG + A + ++VAVK LKD T++ K+F+ + E++ ++ HE++V
Sbjct: 23 LGEGAFGKVFLAECYNLSPTKDKMLVAVKALKDPTLAARKDFQREAELLTNLQHEHIVKF 82
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG-----------LALGA 426
D ++V +YM G L+ L + ++ + R +A
Sbjct: 83 YGVCGDGDPLIMVFEYMKHGDLNKFLRAHGPDAMILVDGQPRQAKGELGLSQMLHIASQI 142
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------ 480
+ + YL S+ H ++ + N L+ + +I DFG++ S+ R+ G
Sbjct: 143 ASGMVYLASQ--HFVHRDLATRNCLVGANLLVKIGDFGMSRDVY-STDYYRVGGHTMLPI 199
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD 525
+ PE RK + ++DV+SFGV+L E+ T GK P L N E ++
Sbjct: 200 RWMPPESIMYRKFTTESDVWSFGVILWEIFTYGKQPWFQLSNTEVIE 246
>pdb|4FIF|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIF|B Chain B, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIG|A Chain A, Catalytic Domain Of Human Pak4
pdb|4FIG|B Chain B, Catalytic Domain Of Human Pak4
pdb|4FIH|A Chain A, Catalytic Domain Of Human Pak4 With Qkftglprqw Peptide
pdb|4FII|A Chain A, Catalytic Domain Of Human Pak4 With Rpkplvdp Peptide
pdb|4FIJ|A Chain A, Catalytic Domain Of Human Pak4
Length = 346
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--HENLVPLRA 379
+G+G+ G AT+ G +VAVK++ + +++ RE + EVV D HEN+V +
Sbjct: 82 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 138
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y DE +V +++ G+L+ ++ R +N E + + L +A++ LH++G
Sbjct: 139 SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-- 190
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEVTDARKVSQ 494
H +IKS +ILL+ ++SDFG S P R + APE+
Sbjct: 191 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGP 249
Query: 495 KADVYSFGVLLLELLTGKAP 514
+ D++S G++++E++ G+ P
Sbjct: 250 EVDIWSLGIMVIEMVDGEPP 269
>pdb|2QLU|A Chain A, Crystal Structure Of Activin Receptor Type Ii Kinase
Domain From Human
Length = 314
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 67/214 (31%), Positives = 94/214 (43%), Gaps = 35/214 (16%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVK--RLKDVTVSEKEFREKMEVVGSMDHENLVPLRAY 380
E+ +G FG +KA L M VAVK L+D + E RE G M HENL+ A
Sbjct: 21 EIKARGRFGCVWKAQL-MNDFVAVKIFPLQDKQSWQSE-REIFSTPG-MKHENLLQFIAA 77
Query: 381 YYS----RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS- 435
E L+ + GSL+ L GN + W +A SR ++YLH
Sbjct: 78 EKRGSNLEVELWLITAFHDKGSLTDYLKGN------IITWNELCHVAETMSRGLSYLHED 131
Query: 436 --------KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------Y 481
P+ +H + KS N+LL A ++DFGLA P P G Y
Sbjct: 132 VPWCRGEGHKPSIAHRDFKSKNVLLKSDLTAVLADFGLAVRFEPGKPPGDTHGQVGTRRY 191
Query: 482 RAPEVTDA-----RKVSQKADVYSFGVLLLELLT 510
APEV + R + D+Y+ G++L EL++
Sbjct: 192 MAPEVLEGAINFQRDAFLRIDMYAMGLVLWELVS 225
>pdb|2WGJ|A Chain A, X-Ray Structure Of Pf-02341066 Bound To The Kinase Domain
Of C-Met
pdb|2WKM|A Chain A, X-Ray Structure Of Pha-00665752 Bound To The Kinase Domain
Of C-Met
pdb|3ZXZ|A Chain A, X-Ray Structure Of Pf-04217903 Bound To The Kinase Domain
Of C-Met
pdb|3ZZE|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
N'-
((3z)-4-Chloro-7-Methyl-2-Oxo-1,2-Dihydro-3h-Indol-3-
Ylidene)-2-(4-Hydroxyphenyl)propanohydrazide
pdb|4AOI|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( 3-((1h-
Pyrrolo(2,3-B)pyridin-3-Yl)methyl)-(1,2,4)triazolo(
4,3-B)(1,2,4) Triazin-6-Yl)benzonitrile
pdb|4AP7|A Chain A, Crystal Structure Of C-Met Kinase Domain In Complex With
4-( (6-(4-
Fluorophenyl)-(1,2,4)triazolo(4,3-B)(1,2,
4)triazin-3-Yl)methyl) Phenol
Length = 306
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 33 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 92
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 93 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 148
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 149 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 203
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 204 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 247
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 248 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 291
>pdb|4FIE|A Chain A, Full-Length Human Pak4
pdb|4FIE|B Chain B, Full-Length Human Pak4
Length = 423
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 57/200 (28%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--HENLVPLRA 379
+G+G+ G AT+ G +VAVK++ + +++ RE + EVV D HEN+V +
Sbjct: 159 IGEGSTGIVCIATVRSSGKLVAVKKM---DLRKQQRRELLFNEVVIMRDYQHENVVEMYN 215
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y DE +V +++ G+L+ ++ R +N E + + L +A++ LH++G
Sbjct: 216 SYLVGDELWVVMEFLEGGALTDIVTHTR------MNEEQIAAVCLAVLQALSVLHAQG-- 267
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEVTDARKVSQ 494
H +IKS +ILL+ ++SDFG S P R + APE+
Sbjct: 268 VIHRDIKSDSILLTHDGRVKLSDFGFCAQVS-KEVPRRKXLVGTPYWMAPELISRLPYGP 326
Query: 495 KADVYSFGVLLLELLTGKAP 514
+ D++S G++++E++ G+ P
Sbjct: 327 EVDIWSLGIMVIEMVDGEPP 346
>pdb|3F66|A Chain A, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
pdb|3F66|B Chain B, Human C-Met Kinase In Complex With Quinoxaline Inhibitor
Length = 298
Score = 70.9 bits (172), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 31 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 90
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 91 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 146
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 147 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 201
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 202 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 245
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 246 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 289
>pdb|3I5N|A Chain A, Crystal Structure Of C-Met With Triazolopyridazine
Inhibitor 13
pdb|3U6H|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 26
pdb|3U6I|A Chain A, Crystal Structure Of C-Met In Complex With Pyrazolone
Inhibitor 58a
pdb|4DEG|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridazine Inhibitor 2
pdb|4DEH|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 3
pdb|4DEI|A Chain A, Crystal Structure Of C-Met In Complex With
Triazolopyridinone Inhibitor 24
Length = 309
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 35 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 94
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 95 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 150
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 151 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 205
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 206 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 249
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 250 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 293
>pdb|2RFN|A Chain A, X-ray Structure Of C-met With Inhibitor.
pdb|2RFN|B Chain B, X-ray Structure Of C-met With Inhibitor.
pdb|2RFS|A Chain A, X-Ray Structure Of Su11274 Bound To C-Met
pdb|3CCN|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3CD8|A Chain A, X-Ray Structure Of C-Met With Triazolopyridazine
Inhibitor.
pdb|3EFJ|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFJ|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 7
pdb|3EFK|A Chain A, Structure Of C-Met With Pyrimidone Inhibitor 50
pdb|3EFK|B Chain B, Structure Of C-Met With Pyrimidone Inhibitor 50
Length = 310
Score = 70.5 bits (171), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 76/284 (26%), Positives = 121/284 (42%), Gaps = 43/284 (15%)
Query: 323 EVLGKGTFGTAYKATL----EMGIVVAVKRLKDVT-VSE-KEFREKMEVVGSMDHENLVP 376
EV+G+G FG Y TL I AVK L +T + E +F + ++ H N++
Sbjct: 36 EVIGRGHFGCVYHGTLLDNDGKKIHCAVKSLNRITDIGEVSQFLTEGIIMKDFSHPNVLS 95
Query: 377 LRAYYY-SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L S L+V YM G L + R P + G L ++ + YL S
Sbjct: 96 LLGICLRSEGSPLVVLPYMKHGDLRNFI---RNETHNP-TVKDLIGFGLQVAKGMKYLAS 151
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----------HLASPSSTPNRIDGYRAP 484
K H ++ + N +L + + +++DFGLA H + + P + + A
Sbjct: 152 K--KFVHRDLAARNCMLDEKFTVKVADFGLARDMYDKEYYSVHNKTGAKLPVK---WMAL 206
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFD 544
E +K + K+DV+SFGVLL EL+T AP +N + V+
Sbjct: 207 ESLQTQKFTTKSDVWSFGVLLWELMTRGAPPYPDVN----------------TFDITVYL 250
Query: 545 LELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
L+ R E L ++ + C + RPS +E+ S+I I
Sbjct: 251 LQGRRLLQPEYCPDPLYEVMLKCWHPKAEMRPSFSELVSRISAI 294
>pdb|2VWU|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWV|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWW|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWX|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWY|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VWZ|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX0|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2VX1|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2X9F|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|2XVD|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
pdb|4BB4|A Chain A, Ephb4 Kinase Domain Inhibitor Complex
Length = 302
Score = 70.5 bits (171), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKD--VTVSEKEFREKMEVVGSMDHENLVP 376
EV+G G FG + L+ VA+K LK +EF + ++G +H N++
Sbjct: 22 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 81
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + +++ ++M G+L + L N G G+ G + + YL
Sbjct: 82 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLAEM 137
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNRIDG--------YRAPEVT 487
+ H ++ + NIL++ + ++SDFGL+ L SS P + APE
Sbjct: 138 --SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTETSSLGGKIPIRWTAPEAI 195
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLE 546
RK + +D +S+G+++ E+++ G+ P + N++ V + +++++
Sbjct: 196 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD-------VINAIEQDY-------- 240
Query: 547 LLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + + RP +V S ++++ R+
Sbjct: 241 --RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 283
>pdb|2J51|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To 5-
Amino-3-((4-(Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2,4-Triazole-1-Carbothioamide
Length = 325
Score = 70.1 bits (170), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 66/225 (29%), Positives = 108/225 (48%), Gaps = 28/225 (12%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKM---EVV 366
R + ED E LG G FG YKA + V+A ++ D T SE+E + M +++
Sbjct: 31 RDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDIL 88
Query: 367 GSMDHENLVP-LRAYYYSRDEKLLVHDYMPMGSLSA-LLHGNRGAGRTPLNWETRSGLAL 424
S DH N+V L A+YY + +L+ ++ G++ A +L R + + + L
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTL-- 145
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGY--- 481
A+ YLH H ++K+ NIL + + +++DFG++ A + T R D +
Sbjct: 146 ---DALNYLHDNKII--HRDLKAGNILFTLDGDIKLADFGVS--AKNTRTIQRRDSFIGT 198
Query: 482 ---RAPEV-----TDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
APEV + R KADV+S G+ L+E+ + P L
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|4BC6|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Novel Bosutinib Isoform 1, Previously Thought
To Be Bosutinib
Length = 293
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 27/210 (12%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVPLRAY 380
LG G FG YKA E G + A K ++ T SE+E + ++E++ + DH +V L
Sbjct: 19 LGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGA 76
Query: 381 YYSRDEKLLVHDYMPMGSLSA-LLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
YY + ++ ++ P G++ A +L +RG + R L A+ +LHSK
Sbjct: 77 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSKRII 131
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGY------RAPEVTDARKVS 493
H ++K+ N+L++ + R++DFG++ A T + D + APEV +
Sbjct: 132 --HRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 187
Query: 494 Q-----KADVYSFGVLLLELLTGKAPTQAL 518
KAD++S G+ L+E+ + P L
Sbjct: 188 DTPYDYKADIWSLGITLIEMAQIEPPHHEL 217
>pdb|2VRX|A Chain A, Structure Of Aurora B Kinase In Complex With Zm447439
pdb|2VRX|B Chain B, Structure Of Aurora B Kinase In Complex With Zm447439
Length = 285
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKA-----TLEMGIVVAVKRLKDVTVSEKEFREKME 364
R F ++D LGKG FG Y A M + V K + E + R ++E
Sbjct: 10 RKFTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 67
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ + Y++ R L+ ++ P G L L + GR E RS +
Sbjct: 68 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFD---EQRSATFM 121
Query: 425 GA-SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG--- 480
+ A+ Y H + H +IK N+L+ E +I+DFG + + +PS + G
Sbjct: 122 EELADALHYCHER--KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD 178
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y PE+ + + +K D++ GVL E L G P
Sbjct: 179 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 212
>pdb|4AW5|A Chain A, Complex Of The Ephb4 Kinase Domain With An Oxindole
Inhibitor
Length = 291
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 64/285 (22%), Positives = 128/285 (44%), Gaps = 39/285 (13%)
Query: 323 EVLGKGTFGTAYKATLEMG----IVVAVKRLKD--VTVSEKEFREKMEVVGSMDHENLVP 376
EV+G G FG + L+ VA+K LK +EF + ++G +H N++
Sbjct: 20 EVIGAGEFGEVCRGRLKAPGKKESCVAIKTLKGGYTERQRREFLSEASIMGQFEHPNIIR 79
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + +++ ++M G+L + L N G G+ G + + YL
Sbjct: 80 LEGVVTNSMPVMILTEFMENGALDSFLRLNDGQ----FTVIQLVGMLRGIASGMRYLAEM 135
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNRIDG--------YRAPEVT 487
+ H ++ + NIL++ + ++SDFGL+ L SS P + APE
Sbjct: 136 --SYVHRDLAARNILVNSNLVCKVSDFGLSRFLEENSSDPTYTSSLGGKIPIRWTAPEAI 193
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLE 546
RK + +D +S+G+++ E+++ G+ P + N++ V + +++++
Sbjct: 194 AFRKFTSASDAWSYGIVMWEVMSFGERPYWDMSNQD-------VINAIEQDY-------- 238
Query: 547 LLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
R + L QL ++C + + RP +V S ++++ R+
Sbjct: 239 --RLPPPPDCPTSLHQLMLDCWQKDRNARPRFPQVVSALDKMIRN 281
>pdb|2BFY|A Chain A, Complex Of Aurora-B With Incenp And Hesperidin.
pdb|2BFY|B Chain B, Complex Of Aurora-B With Incenp And Hesperidin
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKA-----TLEMGIVVAVKRLKDVTVSEKEFREKME 364
R F ++D LGKG FG Y A M + V K + E + R ++E
Sbjct: 9 RKFTIDDF--DIVRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ + Y++ R L+ ++ P G L L + GR E RS +
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFD---EQRSATFM 120
Query: 425 GA-SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG--- 480
+ A+ Y H + H +IK N+L+ E +I+DFG + + +PS + G
Sbjct: 121 EELADALHYCHER--KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD 177
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y PE+ + + +K D++ GVL E L G P
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2BFX|A Chain A, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2BFX|B Chain B, Mechanism Of Aurora-B Activation By Incenp And Inhibition
By Hesperidin.
pdb|2VGP|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGP|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With A
Aminothiazole Inhibitor
pdb|2VGO|A Chain A, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|2VGO|B Chain B, Crystal Structure Of Aurora B Kinase In Complex With
Reversine Inhibitor
pdb|3ZTX|A Chain A, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen.
pdb|3ZTX|B Chain B, Aurora Kinase Selective Inhibitors Identified Using A
Taxol- Induced Checkpoint Sensitivity Screen
Length = 284
Score = 69.7 bits (169), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 59/214 (27%), Positives = 96/214 (44%), Gaps = 20/214 (9%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKA-----TLEMGIVVAVKRLKDVTVSEKEFREKME 364
R F ++D LGKG FG Y A M + V K + E + R ++E
Sbjct: 9 RKFTIDDF--DIGRPLGKGKFGNVYLAREKQNKFIMALKVLFKSQLEKEGVEHQLRREIE 66
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H N++ + Y++ R L+ ++ P G L L + GR E RS +
Sbjct: 67 IQSHLRHPNILRMYNYFHDRKRIYLMLEFAPRGELYKELQKH---GRFD---EQRSATFM 120
Query: 425 GA-SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG--- 480
+ A+ Y H + H +IK N+L+ E +I+DFG + + +PS + G
Sbjct: 121 EELADALHYCHER--KVIHRDIKPENLLMGYKGELKIADFGWS-VHAPSLRRRXMCGTLD 177
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y PE+ + + +K D++ GVL E L G P
Sbjct: 178 YLPPEMIEGKTHDEKVDLWCAGVLCYEFLVGMPP 211
>pdb|2J7T|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
Bound To Su11274
pdb|4AOT|A Chain A, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4AOT|B Chain B, Crystal Structure Of Human Serine Threonine Kinase-10
(Lok) Bound To Gw830263a
pdb|4EQU|A Chain A, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
pdb|4EQU|B Chain B, Human Stk-10 (Lok) Kinase Domain In Dfg-Out Conformation
With Inhibitor Dsa-7
Length = 302
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 60/210 (28%), Positives = 103/210 (49%), Gaps = 27/210 (12%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVPLRAY 380
LG G FG YKA E G + A K ++ T SE+E + ++E++ + DH +V L
Sbjct: 27 LGDGAFGKVYKAKNKETGALAAAKVIE--TKSEEELEDYIVEIEILATCDHPYIVKLLGA 84
Query: 381 YYSRDEKLLVHDYMPMGSLSA-LLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
YY + ++ ++ P G++ A +L +RG + R L A+ +LHSK
Sbjct: 85 YYHDGKLWIMIEFCPGGAVDAIMLELDRGLTEPQIQVVCRQML-----EALNFLHSKRII 139
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGY------RAPEVTDARKVS 493
H ++K+ N+L++ + R++DFG++ A T + D + APEV +
Sbjct: 140 --HRDLKAGNVLMTLEGDIRLADFGVS--AKNLKTLQKRDSFIGTPYWMAPEVVMCETMK 195
Query: 494 Q-----KADVYSFGVLLLELLTGKAPTQAL 518
KAD++S G+ L+E+ + P L
Sbjct: 196 DTPYDYKADIWSLGITLIEMAQIEPPHHEL 225
>pdb|1YVJ|A Chain A, Crystal Structure Of The Jak3 Kinase Domain In Complex
With A Staurosporine Analogue
Length = 290
Score = 69.3 bits (168), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 130/287 (45%), Gaps = 43/287 (14%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDV-TVSEKEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G +VAVK+L+ +++F+ +++++ ++ + +V R
Sbjct: 15 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 74
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS---RAIAYL 433
Y R E LV +Y+P G L L +R S L L +S + + YL
Sbjct: 75 GVSYGPGRPELRLVMEYLPSGCLRDFLQRHRARLDA-------SRLLLYSSQICKGMEYL 127
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL----------ASPSSTPNRIDGYRA 483
S+ H ++ + NIL+ +I+DFGLA L P +P I Y A
Sbjct: 128 GSR--RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDXXVVREPGQSP--IFWY-A 182
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVDLPRWVQSVVKEEWT 539
PE S+++DV+SFGV+L EL T +P+ L G + R V ++ +
Sbjct: 183 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE--RDVPALCRLL-E 239
Query: 540 AEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
L E+ +L++L C A P +RPS + + Q++
Sbjct: 240 LLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLD 283
>pdb|2IVT|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain
pdb|2IVU|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Zd6474
pdb|2X2K|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2L|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
pdb|2X2M|B Chain B, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain With Inhibitor
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 51/300 (17%)
Query: 322 AEVLGKGTFGTAYKATL-----EMG-IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHE 372
+ LG+G FG KAT G VAVK LK+ S E R+ + V+ ++H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWETRSG 421
+++ L LL+ +Y GSL L +R G + L+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 422 LALGASRAIAYLHSKGPAN------SHGNIKSSNILLSKSYEARISDFGLAH-LASPSST 474
L +G + A+ S+G H ++ + NIL+++ + +ISDFGL+ + S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 475 PNRIDG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPR 528
R G + A E + ++DV+SFGVLL E++T G P + E +L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 529 WVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
T + R N EEM +L+ + C Q PD RP A+++ +E++
Sbjct: 267 ----------TGHRME----RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2IVV|A Chain A, Crystal Structure Of Phosphorylated Ret Tyrosine Kinase
Domain Complexed With The Inhibitor Pp1
Length = 314
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 51/300 (17%)
Query: 322 AEVLGKGTFGTAYKATL-----EMG-IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHE 372
+ LG+G FG KAT G VAVK LK+ S E R+ + V+ ++H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWETRSG 421
+++ L LL+ +Y GSL L +R G + L+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 422 LALGASRAIAYLHSKGPAN------SHGNIKSSNILLSKSYEARISDFGLAH-LASPSST 474
L +G + A+ S+G H ++ + NIL+++ + +ISDFGL+ + S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMSLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSX 206
Query: 475 PNRIDG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPR 528
R G + A E + ++DV+SFGVLL E++T G P + E +L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 529 WVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
T + R N EEM +L+ + C Q PD RP A+++ +E++
Sbjct: 267 ----------TGHRME----RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|2JED|A Chain A, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution.
pdb|2JED|B Chain B, The Crystal Structure Of The Kinase Domain Of The Protein
Kinase C Theta In Complex With Nvp-Xaa228 At 2.32a
Resolution
Length = 352
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 37/238 (15%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLK-DVTVSEKEFR----EKMEVVGSMDHENLVP 376
++LGKG+FG + A + A+K LK DV + + + EK + + +H L
Sbjct: 24 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 83
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET--RSGLALGASRAIAYLH 434
+ + +++ V +Y+ G L ++ + + L+ T + + LG + +LH
Sbjct: 84 MFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILG----LQFLH 136
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAPEV 486
SKG + ++K NILL K +I+DFG+ A TP+ Y APE+
Sbjct: 137 SKGIV--YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNEFCGTPD----YIAPEI 190
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD--------LPRWVQSVVKE 536
+K + D +SFGVLL E+L G++P EE PRW++ K+
Sbjct: 191 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 248
>pdb|1XJD|A Chain A, Crystal Structure Of Pkc-Theta Complexed With
Staurosporine At 2a Resolution
Length = 345
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 65/238 (27%), Positives = 110/238 (46%), Gaps = 37/238 (15%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLK-DVTVSEKEFR----EKMEVVGSMDHENLVP 376
++LGKG+FG + A + A+K LK DV + + + EK + + +H L
Sbjct: 23 KMLGKGSFGKVFLAEFKKTNQFFAIKALKKDVVLMDDDVECTMVEKRVLSLAWEHPFLTH 82
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET--RSGLALGASRAIAYLH 434
+ + +++ V +Y+ G L ++ + + L+ T + + LG + +LH
Sbjct: 83 MFCTFQTKENLFFVMEYLNGGDL---MYHIQSCHKFDLSRATFYAAEIILG----LQFLH 135
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAPEV 486
SKG + ++K NILL K +I+DFG+ A TP+ Y APE+
Sbjct: 136 SKGIV--YRDLKLDNILLDKDGHIKIADFGMCKENMLGDAKTNXFCGTPD----YIAPEI 189
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD--------LPRWVQSVVKE 536
+K + D +SFGVLL E+L G++P EE PRW++ K+
Sbjct: 190 LLGQKYNHSVDWWSFGVLLYEMLIGQSPFHGQDEEELFHSIRMDNPFYPRWLEKEAKD 247
>pdb|4F0I|A Chain A, Crystal Structure Of Apo Trka
pdb|4F0I|B Chain B, Crystal Structure Of Apo Trka
Length = 300
Score = 69.3 bits (168), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKDVTVSEKE-FREKMEVVGSMDHENLVPL 377
LG+G FG + A + ++VAVK LK+ + S ++ F+ + E++ + H+++V
Sbjct: 20 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 79
Query: 378 RAYYYSRDEKLLVHDYMPMGSL----------SALLHGNRGAGRTPLNWETRSGLALGAS 427
L+V +YM G L + LL G PL LA+ +
Sbjct: 80 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG--LGQLLAVASQ 137
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------- 480
A ++ G H ++ + N L+ + +I DFG++ S+ R+ G
Sbjct: 138 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGGRTMLPIR 196
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD 525
+ PE RK + ++DV+SFGV+L E+ T GK P L N E +D
Sbjct: 197 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 242
>pdb|3SXR|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXR|B Chain B, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complex With Dasatinib
pdb|3SXS|A Chain A, Crystal Structure Of Bmx Non-Receptor Tyrosine Kinase
Complexed With Pp2
Length = 268
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/273 (22%), Positives = 110/273 (40%), Gaps = 39/273 (14%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSR 384
LG G FG + VAVK +K+ ++SE EF ++ + + + H LV
Sbjct: 16 LGSGQFGVVKLGKWKGQYDVAVKMIKEGSMSEDEFFQEAQTMMKLSHPKLVKFYGVCSKE 75
Query: 385 DEKLLVHDYMPMGSLSALLHGNRGAGRTP-----LNWETRSGLALGASRAIAYLHSKGPA 439
+V +Y+ G L L + G G P + ++ G+A S
Sbjct: 76 YPIYIVTEYISNGCLLNYLRSH-GKGLEPSQLLEMCYDVCEGMAFLESHQFI-------- 126
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-----GYRAPEVTDARKVSQ 494
H ++ + N L+ + ++SDFG+ + + + APEV K S
Sbjct: 127 --HRDLAARNCLVDRDLCVKVSDFGMTRYVLDDQYVSSVGTKFPVKWSAPEVFHYFKYSS 184
Query: 495 KADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNV 553
K+DV++FG+L+ E+ + GK P N E V + + ++
Sbjct: 185 KSDVWAFGILMWEVFSLGKMPYDLYTNSEVVLKVSQGHRLYRPHLASDT----------- 233
Query: 554 EEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ Q+ +C + P+ RP+ ++ S IE
Sbjct: 234 ------IYQIMYSCWHELPEKRPTFQQLLSSIE 260
>pdb|1U54|A Chain A, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 323 EVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENL 374
E LG G+FG + + + VAVK LK +S+ E F ++ + S+DH NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + K+ V + P+GSL L ++G T S A+ + + YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 138
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVT 487
SK H ++ + N+LL+ +I DFGL + + +R APE
Sbjct: 139 SK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 196
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL--------LNEEGVDLPRWVQSVVKEEW 538
R S +D + FGV L E+ T G+ P L +++EG LPR E+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------PEDC 250
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMA 579
+++++ MVQ C A P++RP+
Sbjct: 251 PQDIYNV-----------MVQ-------CWAHKPEDRPTFV 273
>pdb|4GT5|A Chain A, Crystal Structure Of The Inactive Trka Kinase Domain
Length = 306
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 104/226 (46%), Gaps = 28/226 (12%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKDVTVSEKE-FREKMEVVGSMDHENLVPL 377
LG+G FG + A + ++VAVK LK+ + S ++ F+ + E++ + H+++V
Sbjct: 26 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 85
Query: 378 RAYYYSRDEKLLVHDYMPMGSL----------SALLHGNRGAGRTPLNWETRSGLALGAS 427
L+V +YM G L + LL G PL LA+ +
Sbjct: 86 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLG--LGQLLAVASQ 143
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------- 480
A ++ G H ++ + N L+ + +I DFG++ S+ R+ G
Sbjct: 144 VAAGMVYLAGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGGRTMLPIR 202
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD 525
+ PE RK + ++DV+SFGV+L E+ T GK P L N E +D
Sbjct: 203 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID 248
>pdb|4EWH|B Chain B, Co-Crystal Structure Of Ack1 With Inhibitor
pdb|4EWH|A Chain A, Co-Crystal Structure Of Ack1 With Inhibitor
Length = 275
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 323 EVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENL 374
E LG G+FG + + + VAVK LK +S+ E F ++ + S+DH NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + K+ V + P+GSL L ++G T S A+ + + YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 128
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVT 487
SK H ++ + N+LL+ +I DFGL + + +R APE
Sbjct: 129 SK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHXVMQEHRKVPFAWCAPESL 186
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL--------LNEEGVDLPRWVQSVVKEEW 538
R S +D + FGV L E+ T G+ P L +++EG LPR E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------PEDC 240
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMA 579
+++++ MVQ C A P++RP+
Sbjct: 241 PQDIYNV-----------MVQ-------CWAHKPEDRPTFV 263
>pdb|2IVS|A Chain A, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
pdb|2IVS|B Chain B, Crystal Structure Of Non-Phosphorylated Ret Tyrosine
Kinase Domain
Length = 314
Score = 68.9 bits (167), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 80/300 (26%), Positives = 130/300 (43%), Gaps = 51/300 (17%)
Query: 322 AEVLGKGTFGTAYKATL-----EMG-IVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHE 372
+ LG+G FG KAT G VAVK LK+ S E R+ + V+ ++H
Sbjct: 28 GKTLGEGEFGKVVKATAFHLKGRAGYTTVAVKMLKE-NASPSELRDLLSEFNVLKQVNHP 86
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWETRSG 421
+++ L LL+ +Y GSL L +R G + L+
Sbjct: 87 HVIKLYGACSQDGPLLLIVEYAKYGSLRGFLRESRKVGPGYLGSGGSRNSSSLDHPDERA 146
Query: 422 LALGASRAIAYLHSKGPAN------SHGNIKSSNILLSKSYEARISDFGLAH-LASPSST 474
L +G + A+ S+G H ++ + NIL+++ + +ISDFGL+ + S
Sbjct: 147 LTMGDLISFAWQISQGMQYLAEMKLVHRDLAARNILVAEGRKMKISDFGLSRDVYEEDSY 206
Query: 475 PNRIDG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPR 528
R G + A E + ++DV+SFGVLL E++T G P + E +L +
Sbjct: 207 VKRSQGRIPVKWMAIESLFDHIYTTQSDVWSFGVLLWEIVTLGGNPYPGIPPERLFNLLK 266
Query: 529 WVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
T + R N EEM +L+ + C Q PD RP A+++ +E++
Sbjct: 267 ----------TGHRME----RPDNCSEEMYRLM---LQCWKQEPDKRPVFADISKDLEKM 309
>pdb|4AOJ|A Chain A, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|B Chain B, Human Trka In Complex With The Inhibitor Az-23
pdb|4AOJ|C Chain C, Human Trka In Complex With The Inhibitor Az-23
Length = 329
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 71/292 (24%), Positives = 129/292 (44%), Gaps = 45/292 (15%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKDVTVSEKE-FREKMEVVGSMDHENLVPL 377
LG+G FG + A + ++VAVK LK+ + S ++ F+ + E++ + H+++V
Sbjct: 49 LGEGAFGKVFLAECHNLLPEQDKMLVAVKALKEASESARQDFQREAELLTMLQHQHIVRF 108
Query: 378 RAYYYSRDEKLLVHDYMPMGSL----------SALLHGNRGAGRTPLNWETRSGLALGAS 427
L+V +YM G L + LL G PL +A +
Sbjct: 109 FGVCTEGRPLLMVFEYMRHGDLNRFLRSHGPDAKLLAGGEDVAPGPLGLGQLLAVASQVA 168
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------- 480
+ YL G H ++ + N L+ + +I DFG++ S+ R+ G
Sbjct: 169 AGMVYL--AGLHFVHRDLATRNCLVGQGLVVKIGDFGMSRDIY-STDYYRVGGRTMLPIR 225
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWT 539
+ PE RK + ++DV+SFGV+L E+ T GK P L N E +D + +
Sbjct: 226 WMPPESILYRKFTTESDVWSFGVVLWEIFTYGKQPWYQLSNTEAID------CITQGR-- 277
Query: 540 AEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
EL R + E+ +++ C + P R S+ +V ++++ + ++
Sbjct: 278 ------ELERPRACPPEVYAIMR---GCWQREPQQRHSIKDVHARLQALAQA 320
>pdb|3NYX|A Chain A, Non-Phosphorylated Tyk2 Jh1 Domain With
Quinoline-Thiadiazole- Thiophene Inhibitor
Length = 302
Score = 68.9 bits (167), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 64/209 (30%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 325 LGKGTFGT----AYKATLE-MGIVVAVKRLK-DVTVSEKE-FREKMEVVGSMDHENLVPL 377
LG+G FG Y T + G +VAVK LK D + ++++++++ ++ HE+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 378 RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + EK LV +Y+P+GSL L R + A +AYLHS
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHS 135
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DG-----YRAPEVTD 488
+ H N+ + N+LL +I DFGLA R+ DG + APE
Sbjct: 136 Q--HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
K +DV+SFGV L ELLT +Q+
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQS 222
>pdb|4HZS|A Chain A, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|B Chain B, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|C Chain C, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
pdb|4HZS|D Chain D, Crystal Structure Of Ack1 Kinase Domain With C-terminal
Sh3 Domain
Length = 341
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 323 EVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENL 374
E LG G+FG + + + VAVK LK +S+ E F ++ + S+DH NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + K+ V + P+GSL L ++G T S A+ + + YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 132
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVT 487
SK H ++ + N+LL+ +I DFGL + + +R APE
Sbjct: 133 SK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL--------LNEEGVDLPRWVQSVVKEEW 538
R S +D + FGV L E+ T G+ P L +++EG LPR E+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------PEDC 244
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMA 579
+++++ MVQ C A P++RP+
Sbjct: 245 PQDIYNV-----------MVQ-------CWAHKPEDRPTFV 267
>pdb|3OZ6|A Chain A, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
pdb|3OZ6|B Chain B, Crystal Structure Of Mapk From Cryptosporidium Parvum,
Cgd2_1960
Length = 388
Score = 68.9 bits (167), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 69/232 (29%), Positives = 108/232 (46%), Gaps = 44/232 (18%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDV----TVSEKEFREKMEVVGSMDHENLVPLRA 379
LGKG +G +K+ G VVAVK++ D T +++ FRE M + HEN+V L
Sbjct: 17 LGKGAYGIVWKSIDRRTGEVVAVKKIFDAFQNSTDAQRTFREIMILTELSGHENIVNLLN 76
Query: 380 YYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +++ LV DYM L A++ N L + + + I YLHS G
Sbjct: 77 VLRADNDRDVYLVFDYMET-DLHAVIRAN------ILEPVHKQYVVYQLIKVIKYLHSGG 129
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAH-------------LASPSSTPNRIDG---- 480
H ++K SNILL+ +++DFGL+ L+ +T N D
Sbjct: 130 LL--HRDMKPSNILLNAECHVKVADFGLSRSFVNIRRVTNNIPLSINENTENFDDDQPIL 187
Query: 481 --------YRAPEV-TDARKVSQKADVYSFGVLLLELLTGKA--PTQALLNE 521
YRAPE+ + K ++ D++S G +L E+L GK P + +N+
Sbjct: 188 TDYVATRWYRAPEILLGSTKYTKGIDMWSLGCILGEILCGKPIFPGSSTMNQ 239
>pdb|1U46|A Chain A, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U46|B Chain B, Crystal Structure Of The Unphosphorylated Kinase Domain Of
The Tyrosine Kinase Ack1
pdb|1U4D|A Chain A, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U4D|B Chain B, Structure Of The Ack1 Kinase Domain Bound To
Debromohymenialdisine
pdb|1U54|B Chain B, Crystal Structures Of The Phosphorylated And
Unphosphorylated Kinase Domains Of The Cdc42-Associated
Tyrosine Kinase Ack1 Bound To Amp-Pcp
Length = 291
Score = 68.6 bits (166), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 323 EVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENL 374
E LG G+FG + + + VAVK LK +S+ E F ++ + S+DH NL
Sbjct: 24 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 83
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + K+ V + P+GSL L ++G T S A+ + + YL
Sbjct: 84 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 138
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVT 487
SK H ++ + N+LL+ +I DFGL + + +R APE
Sbjct: 139 SK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 196
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL--------LNEEGVDLPRWVQSVVKEEW 538
R S +D + FGV L E+ T G+ P L +++EG LPR E+
Sbjct: 197 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------PEDC 250
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMA 579
+++++ MVQ C A P++RP+
Sbjct: 251 PQDIYNV-----------MVQ-------CWAHKPEDRPTFV 273
>pdb|4ID7|A Chain A, Ack1 Kinase In Complex With The Inhibitor
Cis-3-[8-amino-1-(4-
Phenoxyphenyl)imidazo[1,5-a]pyrazin-3-yl]cyclobutanol
Length = 273
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 323 EVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENL 374
E LG G+FG + + + VAVK LK +S+ E F ++ + S+DH NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + K+ V + P+GSL L ++G T S A+ + + YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 128
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVT 487
SK H ++ + N+LL+ +I DFGL + + +R APE
Sbjct: 129 SK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL--------LNEEGVDLPRWVQSVVKEEW 538
R S +D + FGV L E+ T G+ P L +++EG LPR E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------PEDC 240
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMA 579
+++++ MVQ C A P++RP+
Sbjct: 241 PQDIYNV-----------MVQ-------CWAHKPEDRPTFV 263
>pdb|4E7W|A Chain A, Structure Of Gsk3 From Ustilago Maydis
Length = 394
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 62/218 (28%), Positives = 108/218 (49%), Gaps = 23/218 (10%)
Query: 320 ASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREK-MEVVGSMDHENLVPLR 378
+ +V+G G+FG ++A L VA+K++ + +K F+ + ++++ + H N+V L+
Sbjct: 43 TNCKVIGNGSFGVVFQAKLVESDEVAIKKV----LQDKRFKNRELQIMRIVKHPNVVDLK 98
Query: 379 AYYYS----RDEKL--LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
A++YS +DE LV +Y+P A H + P+ L R++AY
Sbjct: 99 AFFYSNGDKKDEVFLNLVLEYVPETVYRASRHYAKLKQTMPMLLIKLYMYQL--LRSLAY 156
Query: 433 LHSKGPANSHGNIKSSNILLS-KSYEARISDFGLAHL---ASPSSTPNRIDGYRAPE-VT 487
+HS G H +IK N+LL S ++ DFG A + P+ + YRAPE +
Sbjct: 157 IHSIG--ICHRDIKPQNLLLDPPSGVLKLIDFGSAKILIAGEPNVSXICSRYYRAPELIF 214
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVD 525
A + D++S G ++ EL+ G+ E G+D
Sbjct: 215 GATNYTTNIDIWSTGCVMAELMQGQP---LFPGESGID 249
>pdb|4HZR|A Chain A, Crystal Structure Of Ack1 Kinase Domain
pdb|4HZR|B Chain B, Crystal Structure Of Ack1 Kinase Domain
Length = 277
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 323 EVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENL 374
E LG G+FG + + + VAVK LK +S+ E F ++ + S+DH NL
Sbjct: 18 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + K+ V + P+GSL L ++G T S A+ + + YL
Sbjct: 78 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 132
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVT 487
SK H ++ + N+LL+ +I DFGL + + +R APE
Sbjct: 133 SK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 190
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL--------LNEEGVDLPRWVQSVVKEEW 538
R S +D + FGV L E+ T G+ P L +++EG LPR E+
Sbjct: 191 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------PEDC 244
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMA 579
+++++ MVQ C A P++RP+
Sbjct: 245 PQDIYNV-----------MVQ-------CWAHKPEDRPTFV 267
>pdb|3EQP|B Chain B, Crystal Structure Of Ack1 With Compound T95
pdb|3EQP|A Chain A, Crystal Structure Of Ack1 With Compound T95
pdb|3EQR|A Chain A, Crystal Structure Of Ack1 With Compound T74
pdb|3EQR|B Chain B, Crystal Structure Of Ack1 With Compound T74
Length = 276
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 75/281 (26%), Positives = 120/281 (42%), Gaps = 55/281 (19%)
Query: 323 EVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENL 374
E LG G+FG + + + VAVK LK +S+ E F ++ + S+DH NL
Sbjct: 14 EKLGDGSFGVVRRGEWDAPSGKTVSVAVKCLKPDVLSQPEAMDDFIREVNAMHSLDHRNL 73
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + K+ V + P+GSL L ++G T S A+ + + YL
Sbjct: 74 IRLYGVVLTPPMKM-VTELAPLGSLLDRLRKHQGH----FLLGTLSRYAVQVAEGMGYLE 128
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVT 487
SK H ++ + N+LL+ +I DFGL + + +R APE
Sbjct: 129 SK--RFIHRDLAARNLLLATRDLVKIGDFGLMRALPQNDDHYVMQEHRKVPFAWCAPESL 186
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL--------LNEEGVDLPRWVQSVVKEEW 538
R S +D + FGV L E+ T G+ P L +++EG LPR E+
Sbjct: 187 KTRTFSHASDTWMFGVTLWEMFTYGQEPWIGLNGSQILHKIDKEGERLPR------PEDC 240
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMA 579
+++++ MVQ C A P++RP+
Sbjct: 241 PQDIYNV-----------MVQ-------CWAHKPEDRPTFV 263
>pdb|3UBD|A Chain A, Structure Of N-Terminal Domain Of Rsk2 Kinase In Complex
With Flavonoid Glycoside Sl0101
Length = 304
Score = 68.6 bits (166), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 323 EVLGKGTFGTAYKATLEMGI----VVAVKRLKDVTVSEKE-FREKME--VVGSMDHENLV 375
+VLG+G+FG + G + A+K LK T+ ++ R KME ++ ++H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + + L+ D++ G L R + E + A+ +LHS
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLHS 144
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----HLASPSSTPNRIDGYRAPEVTDAR 490
G + ++K NILL + +++DFGL+ H S ++ Y APEV + R
Sbjct: 145 LGII--YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE-YMAPEVVNRR 201
Query: 491 KVSQKADVYSFGVLLLELLTGKAPTQ 516
+Q AD +SFGVL+ E+LTG P Q
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|4EL9|A Chain A, Structure Of N-Terminal Kinase Domain Of Rsk2 With Afzelin
pdb|4GUE|A Chain A, Structure Of N-terminal Kinase Domain Of Rsk2 With
Flavonoid Glycoside Quercitrin
Length = 305
Score = 68.2 bits (165), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 100/206 (48%), Gaps = 20/206 (9%)
Query: 323 EVLGKGTFGTAYKATLEMGI----VVAVKRLKDVTVSEKE-FREKME--VVGSMDHENLV 375
+VLG+G+FG + G + A+K LK T+ ++ R KME ++ ++H +V
Sbjct: 31 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 90
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + + L+ D++ G L R + E + A+ +LHS
Sbjct: 91 KLHYAFQTEGKLYLILDFLRGGDLF-----TRLSKEVMFTEEDVKFYLAELALALDHLHS 145
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----HLASPSSTPNRIDGYRAPEVTDAR 490
G + ++K NILL + +++DFGL+ H S ++ Y APEV + R
Sbjct: 146 LGII--YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE-YMAPEVVNRR 202
Query: 491 KVSQKADVYSFGVLLLELLTGKAPTQ 516
+Q AD +SFGVL+ E+LTG P Q
Sbjct: 203 GHTQSADWWSFGVLMFEMLTGTLPFQ 228
>pdb|2Z7Q|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk-1 Bound To Amp-Pcp
pdb|2Z7R|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Staurosporine
pdb|2Z7S|A Chain A, Crystal Structure Of The N-Terminal Kinase Domain Of Human
Rsk1 Bound To Purvalnol A
Length = 321
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/216 (30%), Positives = 109/216 (50%), Gaps = 20/216 (9%)
Query: 323 EVLGKGTFGTAY---KATL-EMGIVVAVKRLKDVTVSEKE-FREKME--VVGSMDHENLV 375
+VLG+G+FG + K T + G + A+K LK T+ ++ R KME ++ ++H +V
Sbjct: 34 KVLGQGSFGKVFLVRKVTRPDSGHLYAMKVLKKATLKVRDRVRTKMERDILADVNHPFVV 93
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + + L+ D++ G L L + + + LALG + +LHS
Sbjct: 94 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELALG----LDHLHS 148
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----HLASPSSTPNRIDGYRAPEVTDAR 490
G + ++K NILL + +++DFGL+ H S ++ Y APEV + +
Sbjct: 149 LGII--YRDLKPENILLDEEGHIKLTDFGLSKEAIDHEKKAYSFCGTVE-YMAPEVVNRQ 205
Query: 491 KVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDL 526
S AD +S+GVL+ E+LTG P Q +E + L
Sbjct: 206 GHSHSADWWSYGVLMFEMLTGSLPFQGKDRKETMTL 241
>pdb|2JFM|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (Unliganded
Form)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 28/225 (12%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKM---EVV 366
R + ED E LG G FG YKA + V+A ++ D T SE+E + M +++
Sbjct: 31 RDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDIL 88
Query: 367 GSMDHENLVP-LRAYYYSRDEKLLVHDYMPMGSLSA-LLHGNRGAGRTPLNWETRSGLAL 424
S DH N+V L A+YY + +L+ ++ G++ A +L R + + + L
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTL-- 145
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGY--- 481
A+ YLH H ++K+ NIL + + +++DFG++ A + R D +
Sbjct: 146 ---DALNYLHDNKII--HRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDSFIGT 198
Query: 482 ---RAPEV-----TDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
APEV + R KADV+S G+ L+E+ + P L
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|3KUL|B Chain B, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 306 GKGDRAFDLEDLLRAS----AEVLGKGTFGTAYKATLEM----GIVVAVKRLKD--VTVS 355
G+ R+F E + AS +++G G G L + + VA+K LK
Sbjct: 36 GRAGRSFTRE--IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 356 EKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLN 415
++F + ++G DH N++ L ++V +YM GSL L + G
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ----FT 149
Query: 416 WETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL------A 469
G+ G + YL G H ++ + N+L+ + ++SDFGL+ + A
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 470 SPSSTPNRID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLP 527
+ ++T +I + APE R S +DV+SFGV++ E+L G+ P + N +
Sbjct: 208 AXTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD----- 262
Query: 528 RWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V S V+E + R L QL ++C + RP +++ S ++
Sbjct: 263 --VISSVEEGY----------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
Query: 588 ICRS 591
+ RS
Sbjct: 311 LIRS 314
>pdb|3G51|A Chain A, Structural Diversity Of The Active Conformation Of The N-
Terminal Kinase Domain Of P90 Ribosomal S6 Kinase 2
Length = 325
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 103/206 (50%), Gaps = 20/206 (9%)
Query: 323 EVLGKGTFGTAYKATLEMGI----VVAVKRLKDVTVSEKE-FREKME--VVGSMDHENLV 375
+VLG+G+FG + G + A+K LK T+ ++ R KME ++ ++H +V
Sbjct: 30 KVLGQGSFGKVFLVKKISGSDARQLYAMKVLKKATLKVRDRVRTKMERDILVEVNHPFIV 89
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + + L+ D++ G L L + + + LAL A+ +LHS
Sbjct: 90 KLHYAFQTEGKLYLILDFLRGGDLFTRLSKEVMFTEEDVKFYL-AELAL----ALDHLHS 144
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA-----HLASPSSTPNRIDGYRAPEVTDAR 490
G + ++K NILL + +++DFGL+ H S ++ Y APEV + R
Sbjct: 145 LGII--YRDLKPENILLDEEGHIKLTDFGLSKESIDHEKKAYSFCGTVE-YMAPEVVNRR 201
Query: 491 KVSQKADVYSFGVLLLELLTGKAPTQ 516
+Q AD +SFGVL+ E+LTG P Q
Sbjct: 202 GHTQSADWWSFGVLMFEMLTGTLPFQ 227
>pdb|3NZ0|A Chain A, Non-Phosphorylated Tyk2 Kinase With Cmp6
Length = 302
Score = 67.8 bits (164), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/209 (30%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 325 LGKGTFGT----AYKATLE-MGIVVAVKRLK-DVTVSEKE-FREKMEVVGSMDHENLVPL 377
LG+G FG Y T + G +VAVK LK D + ++++++++ ++ HE+++
Sbjct: 22 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADCGPQHRSGWKQEIDILRTLYHEHIIKY 81
Query: 378 RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + EK LV +Y+P+GSL L R + A +AYLH+
Sbjct: 82 KGCCEDQGEKSLQLVMEYVPLGSLRDYL------PRHSIGLAQLLLFAQQICEGMAYLHA 135
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DG-----YRAPEVTD 488
+ H N+ + N+LL +I DFGLA R+ DG + APE
Sbjct: 136 Q--HYIHRNLAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPECLK 193
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
K +DV+SFGV L ELLT +Q+
Sbjct: 194 EYKFYYASDVWSFGVTLYELLTHCDSSQS 222
>pdb|2JFL|A Chain A, Crystal Structure Of Human Ste20-Like Kinase (
Diphosphorylated Form) Bound To 5- Amino-3-((4-(
Aminosulfonyl)phenyl)amino)-N-(2,6-
Difluorophenyl)-1h-1,2, 4-Triazole-1-Carbothioamide
Length = 325
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 107/225 (47%), Gaps = 28/225 (12%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKM---EVV 366
R + ED E LG G FG YKA + V+A ++ D T SE+E + M +++
Sbjct: 31 RDLNPEDFWEIIGE-LGDGAFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDIL 88
Query: 367 GSMDHENLVP-LRAYYYSRDEKLLVHDYMPMGSLSA-LLHGNRGAGRTPLNWETRSGLAL 424
S DH N+V L A+YY + +L+ ++ G++ A +L R + + + L
Sbjct: 89 ASCDHPNIVKLLDAFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTL-- 145
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGY--- 481
A+ YLH H ++K+ NIL + + +++DFG++ A + R D +
Sbjct: 146 ---DALNYLHDNKII--HRDLKAGNILFTLDGDIKLADFGVS--AKNTRXIQRRDXFIGT 198
Query: 482 ---RAPEV-----TDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
APEV + R KADV+S G+ L+E+ + P L
Sbjct: 199 PYWMAPEVVMCETSKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 243
>pdb|4APC|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4APC|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
pdb|4B9D|A Chain A, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor.
pdb|4B9D|B Chain B, Crystal Structure Of Human Nima-Related Kinase 1 (Nek1)
With Inhibitor
Length = 350
Score = 67.4 bits (163), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 98/205 (47%), Gaps = 21/205 (10%)
Query: 325 LGKGTFGTA--YKATLEMGIVVAVKRLKDVTVSEKE---FREKMEVVGSMDHENLVPLRA 379
+G+G+FG A K+T E G +K + +S KE R ++ V+ +M H N+V R
Sbjct: 32 IGEGSFGKAILVKST-EDGRQYVIKEINISRMSSKEREESRREVAVLANMKHPNIVQYRE 90
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGA---GRTPLNWETRSGLALGASRAIAYLHSK 436
+ +V DY G L ++ +G L+W + LAL ++H +
Sbjct: 91 SFEENGSLYIVMDYCEGGDLFKRINAQKGVLFQEDQILDWFVQICLAL------KHVHDR 144
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR----IDGYRAPEVTDARKV 492
H +IKS NI L+K ++ DFG+A + + + R Y +PE+ + +
Sbjct: 145 KIL--HRDIKSQNIFLTKDGTVQLGDFGIARVLNSTVELARACIGTPYYLSPEICENKPY 202
Query: 493 SQKADVYSFGVLLLELLTGKAPTQA 517
+ K+D+++ G +L EL T K +A
Sbjct: 203 NNKSDIWALGCVLYELCTLKHAFEA 227
>pdb|3KUL|A Chain A, Kinase Domain Of Human Ephrin Type-A Receptor 8 (Epha8)
Length = 325
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 75/304 (24%), Positives = 131/304 (43%), Gaps = 43/304 (14%)
Query: 306 GKGDRAFDLEDLLRAS----AEVLGKGTFGTAYKATLEM----GIVVAVKRLKD--VTVS 355
G+ R+F E + AS +++G G G L + + VA+K LK
Sbjct: 36 GRAGRSFTRE--IEASRIHIEKIIGSGDSGEVCYGRLRVPGQRDVPVAIKALKAGYTERQ 93
Query: 356 EKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLN 415
++F + ++G DH N++ L ++V +YM GSL L + G
Sbjct: 94 RRDFLSEASIMGQFDHPNIIRLEGVVTRGRLAMIVTEYMENGSLDTFLRTHDGQ----FT 149
Query: 416 WETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL------A 469
G+ G + YL G H ++ + N+L+ + ++SDFGL+ + A
Sbjct: 150 IMQLVGMLRGVGAGMRYLSDLG--YVHRDLAARNVLVDSNLVCKVSDFGLSRVLEDDPDA 207
Query: 470 SPSSTPNRID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLP 527
+ ++T +I + APE R S +DV+SFGV++ E+L G+ P + N +
Sbjct: 208 AYTTTGGKIPIRWTAPEAIAFRTFSSASDVWSFGVVMWEVLAYGERPYWNMTNRD----- 262
Query: 528 RWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V S V+E + R L QL ++C + RP +++ S ++
Sbjct: 263 --VISSVEEGY----------RLPAPMGCPHALHQLMLDCWHKDRAQRPRFSQIVSVLDA 310
Query: 588 ICRS 591
+ RS
Sbjct: 311 LIRS 314
>pdb|3PJC|A Chain A, Crystal Structure Of Jak3 Complexed With A Potent Atp Site
Inhibitor Showing High Selectivity Within The Janus
Kinase Family
Length = 315
Score = 67.0 bits (162), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 77/287 (26%), Positives = 129/287 (44%), Gaps = 43/287 (14%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDV-TVSEKEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G +VAVK+L+ +++F+ +++++ ++ + +V R
Sbjct: 19 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 78
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS---RAIAYL 433
Y R LV +Y+P G L L +R S L L +S + + YL
Sbjct: 79 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDA-------SRLLLYSSQICKGMEYL 131
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL----------ASPSSTPNRIDGYRA 483
S+ H ++ + NIL+ +I+DFGLA L P +P I Y A
Sbjct: 132 GSR--RCVHRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP--IFWY-A 186
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGVDLPRWVQSVVKEEWT 539
PE S+++DV+SFGV+L EL T +P+ L G + R V ++ +
Sbjct: 187 PESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCE--RDVPALCRLL-E 243
Query: 540 AEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
L E+ +L++L C A P +RPS + + Q++
Sbjct: 244 LLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLD 287
>pdb|3LXK|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXL|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 327
Score = 66.6 bits (161), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDV-TVSEKEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G +VAVK+L+ +++F+ +++++ ++ + +V R
Sbjct: 31 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 90
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALLHGNRG---AGRTPL-NWETRSGLA-LGASRAIA 431
Y R LV +Y+P G L L +R A R L + + G+ LG+ R +
Sbjct: 91 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV- 149
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL----------ASPSSTPNRIDGY 481
H ++ + NIL+ +I+DFGLA L P +P I Y
Sbjct: 150 ----------HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP--IFWY 197
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGV--DLPRWVQSVVK 535
APE S+++DV+SFGV+L EL T +P+ L G D+P +
Sbjct: 198 -APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGCERDVP-----ALS 251
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
L E+ +L++L C A P +RPS + + Q++
Sbjct: 252 RLLELLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLD 299
>pdb|2PK9|A Chain A, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PK9|C Chain C, Structure Of The Pho85-pho80 Cdk-cyclin Complex Of The
Phosphate-responsive Signal Transduction Pathway
pdb|2PMI|A Chain A, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
pdb|2PMI|C Chain C, Structure Of The Pho85-Pho80 Cdk-Cyclin Complex Of The
Phosphate- Responsive Signal Transduction Pathway With
Bound Atp-Gamma-S
Length = 317
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 63/223 (28%), Positives = 101/223 (45%), Gaps = 32/223 (14%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLK---DVTVSEKEFREKMEVVGSMDHENLVPLR 378
E LG GT+ T YK G+ VA+K +K + RE + ++ + HEN+V L
Sbjct: 11 EKLGNGTYATVYKGLNKTTGVYVALKEVKLDSEEGTPSTAIRE-ISLMKELKHENIVRLY 69
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTP----------LNWETRSGLALGASR 428
++ ++ LV ++M L + +R G TP W+ GLA
Sbjct: 70 DVIHTENKLTLVFEFMD-NDLKKYM-DSRTVGNTPRGLELNLVKYFQWQLLQGLAFCHEN 127
Query: 429 AIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAP 484
I H ++K N+L++K + ++ DFGLA P +T + YRAP
Sbjct: 128 KIL----------HRDLKPQNLLINKRGQLKLGDFGLARAFGIPVNTFSSEVVTLWYRAP 177
Query: 485 EV-TDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDL 526
+V +R S D++S G +L E++TGK +EE + L
Sbjct: 178 DVLMGSRTYSTSIDIWSCGCILAEMITGKPLFPGTNDEEQLKL 220
>pdb|3DAK|A Chain A, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|B Chain B, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|C Chain C, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
pdb|3DAK|D Chain D, Crystal Structure Of Domain-Swapped Osr1 Kinase Domain
Length = 290
Score = 66.2 bits (160), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 323 EVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRA 379
EV+G G AY A + + + L+ S E ++++ + H N+V
Sbjct: 16 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 75
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTP---LNWETRSGLALGASRAIAYLHSK 436
+ +DE LV + GS+ ++ G L+ T + + + YLH
Sbjct: 76 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 135
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGL-AHLASPSS-TPNRIDG-------YRAPEVT 487
G H ++K+ NILL + +I+DFG+ A LA+ T N++ + APEV
Sbjct: 136 G--QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 193
Query: 488 D-ARKVSQKADVYSFGVLLLELLTGKA------PTQALLNEEGVDLPRWVQSVVKEEWTA 540
+ R KAD++SFG+ +EL TG A P + L+ D P V +E
Sbjct: 194 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM-- 251
Query: 541 EVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEV 581
L +Y +M+ L C + P+ RP+ AE+
Sbjct: 252 ------LKKYGKSFRKMISL------CLQKDPEKRPTAAEL 280
>pdb|3Q4Z|A Chain A, Structure Of Unphosphorylated Pak1 Kinase Domain
pdb|3Q4Z|B Chain B, Structure Of Unphosphorylated Pak1 Kinase Domain
Length = 306
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 54/198 (27%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAY 380
E +G+G GT Y A + G VA++++ +KE ++ V+ + N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
Y DE +V +Y+ GSL+ ++ T ++ + + +A+ +LHS
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQVI- 139
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS----STPNRIDGYRAPEVTDARKVSQKA 496
H NIKS NILL +++DFG +P ST + APEV + K
Sbjct: 140 -HRNIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 198
Query: 497 DVYSFGVLLLELLTGKAP 514
D++S G++ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|2VWI|A Chain A, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|B Chain B, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|C Chain C, Structure Of The Osr1 Kinase, A Hypertension Drug Target
pdb|2VWI|D Chain D, Structure Of The Osr1 Kinase, A Hypertension Drug Target
Length = 303
Score = 66.2 bits (160), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 38/281 (13%)
Query: 323 EVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRA 379
EV+G G AY A + + + L+ S E ++++ + H N+V
Sbjct: 21 EVIGSGATAVVQAAYCAPKKEKVAIKRINLEKCQTSMDELLKEIQAMSQCHHPNIVSYYT 80
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTP---LNWETRSGLALGASRAIAYLHSK 436
+ +DE LV + GS+ ++ G L+ T + + + YLH
Sbjct: 81 SFVVKDELWLVMKLLSGGSVLDIIKHIVAKGEHKSGVLDESTIATILREVLEGLEYLHKN 140
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGL-AHLASPSS-TPNRIDG-------YRAPEVT 487
G H ++K+ NILL + +I+DFG+ A LA+ T N++ + APEV
Sbjct: 141 G--QIHRDVKAGNILLGEDGSVQIADFGVSAFLATGGDITRNKVRKTFVGTPCWMAPEVM 198
Query: 488 D-ARKVSQKADVYSFGVLLLELLTGKA------PTQALLNEEGVDLPRWVQSVVKEEWTA 540
+ R KAD++SFG+ +EL TG A P + L+ D P V +E
Sbjct: 199 EQVRGYDFKADIWSFGITAIELATGAAPYHKYPPMKVLMLTLQNDPPSLETGVQDKEM-- 256
Query: 541 EVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEV 581
L +Y +M+ L C + P+ RP+ AE+
Sbjct: 257 ------LKKYGKSFRKMISL------CLQKDPEKRPTAAEL 285
>pdb|3PP0|A Chain A, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3PP0|B Chain B, Crystal Structure Of The Kinase Domain Of Human Her2
(Erbb2).
pdb|3RCD|A Chain A, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|B Chain B, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|C Chain C, Her2 Kinase Domain Complexed With Tak-285
pdb|3RCD|D Chain D, Her2 Kinase Domain Complexed With Tak-285
Length = 338
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 62/221 (28%), Positives = 99/221 (44%), Gaps = 25/221 (11%)
Query: 322 AEVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENL 374
+VLG G FGT YK + I VA+K L++ T + KE ++ V+ + +
Sbjct: 22 VKVLGSGAFGTVYKGIWIPDGENVKIPVAIKVLRENTSPKANKEILDEAYVMAGVGSPYV 81
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRG--AGRTPLNWETRSGLALGASRAIAY 432
L + +L V MP G L + NRG + LNW + ++ ++Y
Sbjct: 82 SRLLGICLTSTVQL-VTQLMPYGCLLDHVRENRGRLGSQDLLNW------CMQIAKGMSY 134
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EV 486
L H ++ + N+L+ +I+DFGLA L T DG + P E
Sbjct: 135 LEDVRLV--HRDLAARNVLVKSPNHVKITDFGLARLLDIDETEYHADGGKVPIKWMALES 192
Query: 487 TDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
R+ + ++DV+S+GV + EL+T G P + E DL
Sbjct: 193 ILRRRFTHQSDVWSYGVTVWELMTFGAKPYDGIPAREIPDL 233
>pdb|1XKK|A Chain A, Egfr Kinase Domain Complexed With A Quinazoline Inhibitor-
Gw572016
Length = 352
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 65/241 (26%), Positives = 108/241 (44%), Gaps = 34/241 (14%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAE-------VLGKGTFGTAYKATL-----EMGIVVAVKR 348
NL F G G+ + LLR E VLG G FGT YK ++ I VA+K
Sbjct: 19 NLYFQGSGEAPN--QALLRILKETEFKKIKVLGSGAFGTVYKGLWIPEGEKVKIPVAIKE 76
Query: 349 LKDVTV--SEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALL--H 404
L++ T + KE ++ V+ S+D+ ++ L + +L+ MP G L + H
Sbjct: 77 LREATSPKANKEILDEAYVMASVDNPHVCRLLGICLTSTVQLITQ-LMPFGCLLDYVREH 135
Query: 405 GNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFG 464
+ + LNW + ++ + YL + H ++ + N+L+ +I+DFG
Sbjct: 136 KDNIGSQYLLNW------CVQIAKGMNYLEDRRLV--HRDLAARNVLVKTPQHVKITDFG 187
Query: 465 LAHLASPSSTPNRIDGYRAP------EVTDARKVSQKADVYSFGVLLLELLT-GKAPTQA 517
LA L +G + P E R + ++DV+S+GV + EL+T G P
Sbjct: 188 LAKLLGAEEKEYHAEGGKVPIKWMALESILHRIYTHQSDVWSYGVTVWELMTFGSKPYDG 247
Query: 518 L 518
+
Sbjct: 248 I 248
>pdb|1V0B|A Chain A, Crystal Structure Of The T198a Mutant Of Pfpk5
pdb|1V0B|B Chain B, Crystal Structure Of The T198a Mutant Of Pfpk5
Length = 288
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/201 (28%), Positives = 96/201 (47%), Gaps = 18/201 (8%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPLR 378
E +G+GT+G YKA G A+K+++ D + RE + ++ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+++ +LV +++ L LL G L T L IAY H +
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAH---LASPSSTPNRID-GYRAPEV-TDARKVS 493
H ++K N+L+++ E +I+DFGLA + T + YRAP+V ++K S
Sbjct: 122 L--HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 494 QKADVYSFGVLLLELLTGKAP 514
D++S G + E++ G AP
Sbjct: 180 TTIDIWSVGCIFAEMVNG-AP 199
>pdb|3ZHP|C Chain C, Human Mst3 (stk24) In Complex With Mo25beta
pdb|3ZHP|D Chain D, Human Mst3 (stk24) In Complex With Mo25beta
Length = 294
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 16/216 (7%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSM 369
++ D E+L E +GKG+FG +K V ++ D+ +E E + + + +
Sbjct: 21 QSMDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVL 79
Query: 370 DHENLVPLRAYY--YSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
+ + YY Y +D KL ++ +Y+ GS LL PL+ + +
Sbjct: 80 SQCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREI 133
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDG---YR 482
+ + YLHS+ H +IK++N+LLS+ E +++DFG+A L N G +
Sbjct: 134 LKGLDYLHSE--KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWM 191
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
APEV KAD++S G+ +EL G+ P L
Sbjct: 192 APEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 227
>pdb|1V0O|A Chain A, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
pdb|1V0O|B Chain B, Structure Of P. Falciparum Pfpk5-Indirubin-5-Sulphonate
Ligand Complex
Length = 288
Score = 65.9 bits (159), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPLR 378
E +G+GT+G YKA G A+K+++ D + RE + ++ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+++ +LV +++ L LL G L T L IAY H +
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAH---LASPSSTPNRID-GYRAPEV-TDARKVS 493
H ++K N+L+++ E +I+DFGLA + T + YRAP+V ++K S
Sbjct: 122 L--HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEVVTLWYRAPDVLMGSKKYS 179
Query: 494 QKADVYSFGVLLLELLTG 511
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|4HVD|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-1,2,2-trimethyl-propyl)-amide
pdb|4HVG|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((s)-2-hydroxy-1,2-dimethyl-propyl)- Amide
pdb|4HVH|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-2-hydroxy-1,2-dimethyl-propyl
pdb|4HVI|A Chain A, Jak3 Kinase Domain In Complex With
2-cyclopropyl-5h-pyrrolo[2,3- B]pyrazine-7-carboxylic
Acid ((r)-1-methyl-2-oxo-2-piperidin-1-yl- Ethyl)-amide
Length = 314
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/291 (26%), Positives = 128/291 (43%), Gaps = 51/291 (17%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDV-TVSEKEFREKMEVVGSMDHENLVPLR 378
LGKG FG+ + G +VAVK+L+ +++F+ +++++ ++ + +V R
Sbjct: 18 LGKGNFGSVELCRYDPLGDNTGALVAVKQLQHSGPDQQRDFQREIQILKALHSDFIVKYR 77
Query: 379 AYYYS--RDEKLLVHDYMPMGSLSALLHGNRG---AGRTPL-NWETRSGLA-LGASRAIA 431
Y R LV +Y+P G L L +R A R L + + G+ LG+ R +
Sbjct: 78 GVSYGPGRQSLRLVMEYLPSGCLRDFLQRHRARLDASRLLLYSSQICKGMEYLGSRRCV- 136
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL----------ASPSSTPNRIDGY 481
H ++ + NIL+ +I+DFGLA L P +P I Y
Sbjct: 137 ----------HRDLAARNILVESEAHVKIADFGLAKLLPLDKDYYVVREPGQSP--IFWY 184
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT----GKAPTQALLNEEGV--DLPRWVQSVVK 535
APE S+++DV+SFGV+L EL T +P+ L G D+P +
Sbjct: 185 -APESLSDNIFSRQSDVWSFGVVLYELFTYCDKSCSPSAEFLRMMGSERDVP-----ALS 238
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
L E+ +L++L C A P +RPS + + Q++
Sbjct: 239 RLLELLEEGQRLPAPPACPAEVHELMKL---CWAPSPQDRPSFSALGPQLD 286
>pdb|1OB3|A Chain A, Structure Of P. Falciparum Pfpk5
pdb|1OB3|B Chain B, Structure Of P. Falciparum Pfpk5
pdb|1V0P|A Chain A, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
pdb|1V0P|B Chain B, Structure Of P. Falciparum Pfpk5-Purvalanol B Ligand
Complex
Length = 288
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/198 (27%), Positives = 94/198 (47%), Gaps = 17/198 (8%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPLR 378
E +G+GT+G YKA G A+K+++ D + RE + ++ + H N+V L
Sbjct: 8 EKIGEGTYGVVYKAQNNYGETFALKKIRLEKEDEGIPSTTIRE-ISILKELKHSNIVKLY 66
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+++ +LV +++ L LL G L T L IAY H +
Sbjct: 67 DVIHTKKRLVLVFEHLDQ-DLKKLLDVCEGG----LESVTAKSFLLQLLNGIAYCHDRRV 121
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAH---LASPSSTPNRID-GYRAPEV-TDARKVS 493
H ++K N+L+++ E +I+DFGLA + T + YRAP+V ++K S
Sbjct: 122 L--HRDLKPQNLLINREGELKIADFGLARAFGIPVRKYTHEIVTLWYRAPDVLMGSKKYS 179
Query: 494 QKADVYSFGVLLLELLTG 511
D++S G + E++ G
Sbjct: 180 TTIDIWSVGCIFAEMVNG 197
>pdb|3VW6|A Chain A, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
pdb|3VW6|B Chain B, Crystal Structure Of Human Apoptosis Signal-Regulating
Kinase 1 (Ask1) With Imidazopyridine Inhibitor
Length = 269
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 312 FDLEDLLRASAEVLGKGTFGTAYKA-TLEMGIVVAVKRL--KDVTVSEKEFREKMEVVGS 368
+D E VLGKGT+G Y L + +A+K + +D S+ E++ +
Sbjct: 3 YDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKH 61
Query: 369 MDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASR 428
+ H+N+V + + + +P GSLSALL G + N +T
Sbjct: 62 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILE 119
Query: 429 AIAYLHSKGPANSHGNIKSSNILLSKSYEA--RISDFG----LAHLASPSSTPNRIDGYR 482
+ YLH H +IK N+L++ +Y +ISDFG LA + + T Y
Sbjct: 120 GLKYLHDNQIV--HRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 176
Query: 483 APEVTD--ARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
APE+ D R + AD++S G ++E+ TGK P L
Sbjct: 177 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 214
>pdb|3Q4T|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3Q4T|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dorsomorphin
pdb|3SOC|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|3SOC|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With A Quinazolin
pdb|4ASX|A Chain A, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
pdb|4ASX|B Chain B, Crystal Structure Of Activin Receptor Type-Iia (Acvr2a)
Kinase Domain In Complex With Dihydro-Bauerine C
Length = 322
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 65/211 (30%), Positives = 95/211 (45%), Gaps = 34/211 (16%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVK--RLKDVTVSEKEFREKMEVVGSMDHENLVPL--- 377
EV +G FG +KA L + VAVK ++D + E+ ++ + M HEN++
Sbjct: 30 EVKARGRFGCVWKAQL-LNEYVAVKIFPIQDKQSWQNEY--EVYSLPGMKHENILQFIGA 86
Query: 378 RAYYYSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS- 435
S D L L+ + GSLS L N ++W +A +R +AYLH
Sbjct: 87 EKRGTSVDVDLWLITAFHEKGSLSDFLKAN------VVSWNELCHIAETMARGLAYLHED 140
Query: 436 -------KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YR 482
PA SH +IKS N+LL + A I+DFGLA + G Y
Sbjct: 141 IPGLKDGHKPAISHRDIKSKNVLLKNNLTACIADFGLALKFEAGKSAGDTHGQVGTRRYM 200
Query: 483 APEVTDA-----RKVSQKADVYSFGVLLLEL 508
APEV + R + D+Y+ G++L EL
Sbjct: 201 APEVLEGAINFQRDAFLRIDMYAMGLVLWEL 231
>pdb|3NIZ|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Adp Bound
Length = 311
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPLR 378
E +G+GT+G YKA G +VA+KR++ D + RE + ++ + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+S LV ++M L +L E ++GL + Y +G
Sbjct: 86 DVIHSERCLTLVFEFME-KDLKKVLD------------ENKTGLQDSQIKIYLYQLLRGV 132
Query: 439 ANSHG------NIKSSNILLSKSYEARISDFGLAH---LASPSSTPNRID-GYRAPEV-T 487
A+ H ++K N+L++ +++DFGLA + S T + YRAP+V
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
++K S D++S G + E++TGK
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4G5P|A Chain A, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
pdb|4G5P|B Chain B, Crystal Structure Of Egfr Kinase T790m In Complex With
Bibw2992
Length = 330
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 84 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 137 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|2QKR|A Chain A, Cryptosporidium Parvum Cyclin-Dependent Kinase Cgd5_2510
With Indirubin 3'-Monoxime Bound
Length = 313
Score = 65.5 bits (158), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 57/205 (27%), Positives = 97/205 (47%), Gaps = 29/205 (14%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPLR 378
E +G+GT+G YKA G +VA+KR++ D + RE + ++ + H N+V L
Sbjct: 27 EKVGEGTYGVVYKAKDSQGRIVALKRIRLDAEDEGIPSTAIRE-ISLLKELHHPNIVSLI 85
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+S LV ++M L +L E ++GL + Y +G
Sbjct: 86 DVIHSERCLTLVFEFME-KDLKKVLD------------ENKTGLQDSQIKIYLYQLLRGV 132
Query: 439 ANSHG------NIKSSNILLSKSYEARISDFGLAH---LASPSSTPNRID-GYRAPEV-T 487
A+ H ++K N+L++ +++DFGLA + S T + YRAP+V
Sbjct: 133 AHCHQHRILHRDLKPQNLLINSDGALKLADFGLARAFGIPVRSYTHEVVTLWYRAPDVLM 192
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
++K S D++S G + E++TGK
Sbjct: 193 GSKKYSTSVDIWSIGCIFAEMITGK 217
>pdb|4I24|A Chain A, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
pdb|4I24|B Chain B, Structure Of T790m Egfr Kinase Domain Co-crystallized With
Dacomitinib
Length = 329
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 83 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 136 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2JIT|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation
pdb|2JIT|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 81 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 134 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3IKA|A Chain A, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
pdb|3IKA|B Chain B, Crystal Structure Of Egfr 696-1022 T790m Mutant Covalently
Binding To Wz4002
Length = 331
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 106/229 (46%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 85 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 138 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 244
>pdb|3LZB|A Chain A, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|B Chain B, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|C Chain C, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|D Chain D, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|E Chain E, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|F Chain F, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|G Chain G, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
pdb|3LZB|H Chain H, Egfr Kinase Domain Complexed With An
Imidazo[2,1-B]thiazole Inhibitor
Length = 327
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 81 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 134 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|2CLQ|A Chain A, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
pdb|2CLQ|B Chain B, Structure Of Mitogen-Activated Protein Kinase Kinase
Kinase 5
Length = 295
Score = 65.5 bits (158), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 63/218 (28%), Positives = 99/218 (45%), Gaps = 17/218 (7%)
Query: 312 FDLEDLLRASAEVLGKGTFGTAYKA-TLEMGIVVAVKRL--KDVTVSEKEFREKMEVVGS 368
+D E VLGKGT+G Y L + +A+K + +D S+ E++ +
Sbjct: 17 YDYEYDENGDRVVLGKGTYGIVYAGRDLSNQVRIAIKEIPERDSRYSQP-LHEEIALHKH 75
Query: 369 MDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASR 428
+ H+N+V + + + +P GSLSALL G + N +T
Sbjct: 76 LKHKNIVQYLGSFSENGFIKIFMEQVPGGSLSALLRSKWGPLKD--NEQTIGFYTKQILE 133
Query: 429 AIAYLHSKGPANSHGNIKSSNILLSKSYEA--RISDFG----LAHLASPSSTPNRIDGYR 482
+ YLH H +IK N+L++ +Y +ISDFG LA + + T Y
Sbjct: 134 GLKYLHDNQIV--HRDIKGDNVLIN-TYSGVLKISDFGTSKRLAGINPCTETFTGTLQYM 190
Query: 483 APEVTDA--RKVSQKADVYSFGVLLLELLTGKAPTQAL 518
APE+ D R + AD++S G ++E+ TGK P L
Sbjct: 191 APEIIDKGPRGYGKAADIWSLGCTIIEMATGKPPFYEL 228
>pdb|2JIU|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
pdb|2JIU|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Complex With Aee788
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 82 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 135 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|2GS7|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|2GS7|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|A Chain A, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|B Chain B, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|C Chain C, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
pdb|3GT8|D Chain D, Crystal Structure Of The Inactive Egfr Kinase Domain In
Complex With Amp-Pnp
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 84 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 137 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|4G5J|A Chain A, Crystal Structure Of Egfr Kinase In Complex With Bibw2992
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 84 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 137 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|4I23|A Chain A, Crystal Structure Of The Wild-type Egfr Kinase Domain In
Complex With Dacomitinib (soaked)
Length = 329
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 83 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 136 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 242
>pdb|3CKX|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24) In Complex With Staurosporine
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 311 AFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ D E+L E +GKG+FG +K V ++ D+ +E E + + + +
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 371 HENLVPLRAYY--YSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS 427
+ + YY Y +D KL ++ +Y+ GS LL PL+ + +
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREIL 114
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDG---YRA 483
+ + YLHS+ H +IK++N+LLS+ E +++DFG+A L N G + A
Sbjct: 115 KGLDYLHSE--KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMA 172
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
PEV KAD++S G+ +EL G+ P L
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|2GS2|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain
pdb|2GS6|A Chain A, Crystal Structure Of The Active Egfr Kinase Domain In
Complex With An Atp Analog-Peptide Conjugate
pdb|2RF9|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RF9|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|3W2S|A Chain A, Egfr Kinase Domain With Compound4
Length = 330
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 24 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 83
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 84 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 136
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 137 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 194
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 195 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 243
>pdb|2J5F|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 34-Jab
pdb|2ITW|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Afn941
pdb|2ITX|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Amp- Pnp
pdb|2ITY|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Iressa
pdb|2J6M|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With
Aee788
pdb|3POZ|A Chain A, Egfr Kinase Domain Complexed With Tak-285
Length = 327
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 81 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 134 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3TXO|A Chain A, Pkc Eta Kinase In Complex With A Naphthyridine
Length = 353
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 66/233 (28%), Positives = 103/233 (44%), Gaps = 37/233 (15%)
Query: 324 VLGKGTFGTAYKATL-EMGIVVAVKRLK-DVTVSEKEFR----EKMEVVGSMDHENLVPL 377
VLGKG+FG A + E G + AVK LK DV + + + EK + + +H L L
Sbjct: 30 VLGKGSFGKVMLARVKETGDLYAVKVLKKDVILQDDDVECTMTEKRILSLARNHPFLTQL 89
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRAIAYLHSK 436
+ + D V +++ G L + +R E R+ A A+ +LH K
Sbjct: 90 FCCFQTPDRLFFVMEFVNGGDLMFHIQKSRRFD------EARARFYAAEIISALMFLHDK 143
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH--------LASPSSTPNRIDGYRAPEVTD 488
G + ++K N+LL +++DFG+ A+ TP+ Y APE+
Sbjct: 144 GII--YRDLKLDNVLLDHEGHCKLADFGMCKEGICNGVTTATFCGTPD----YIAPEILQ 197
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP---------TQALLNEEGVDLPRWVQS 532
D ++ GVLL E+L G AP +A+LN+E V P W+
Sbjct: 198 EMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAILNDEVV-YPTWLHE 249
>pdb|1M14|A Chain A, Tyrosine Kinase Domain From Epidermal Growth Factor
Receptor
pdb|1M17|A Chain A, Epidermal Growth Factor Receptor Tyrosine Kinase Domain
With 4-Anilinoquinazoline Inhibitor Erlotinib
Length = 333
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 27 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 86
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 87 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 139
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 140 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 197
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 198 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 246
>pdb|3VJO|A Chain A, Crystal Structure Of The Wild-Type Egfr Kinase Domain In
Complex With Amppnp
Length = 334
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 88 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 141 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|3CKW|A Chain A, Crystal Structure Of Sterile 20-Like Kinase 3 (Mst3,
Stk24)
Length = 304
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 101/215 (46%), Gaps = 16/215 (7%)
Query: 311 AFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ D E+L E +GKG+FG +K V ++ D+ +E E + + + +
Sbjct: 2 SLDPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLS 60
Query: 371 HENLVPLRAYY--YSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS 427
+ + YY Y +D KL ++ +Y+ GS LL PL+ + +
Sbjct: 61 QCDSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREIL 114
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDG---YRA 483
+ + YLHS+ H +IK++N+LLS+ E +++DFG+A L N G + A
Sbjct: 115 KGLDYLHSE--KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNTFVGTPFWMA 172
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
PEV KAD++S G+ +EL G+ P L
Sbjct: 173 PEVIKQSAYDSKADIWSLGITAIELARGEPPHSEL 207
>pdb|4HJO|A Chain A, Crystal Structure Of The Inactive Egfr Tyrosine Kinase
Domain With Erlotinib
Length = 337
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 31 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 90
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 91 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 143
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 144 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 201
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 202 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 250
>pdb|2JIV|A Chain A, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
pdb|2JIV|B Chain B, Crystal Structure Of Egfr Kinase Domain T790m Mutation In
Compex With Hki-272
Length = 328
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 99/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 22 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 81
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 82 RLLGICLTSTVQLIMQ-LMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 134
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 135 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 192
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 193 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 224
>pdb|4E20|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 290
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 30/205 (14%)
Query: 325 LGKGTFGT----AYKATLE-MGIVVAVKRLKDVTVSEKE--FREKMEVVGSMDHENLVPL 377
LG+G FG Y T + G +VAVK LK+ + ++ ++E++ ++ HE++V
Sbjct: 16 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 75
Query: 378 RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASR---AIAY 432
+ + EK LV +Y+P+GSL L P + + L L A + +AY
Sbjct: 76 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLLFAQQICEGMAY 126
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DG-----YRAPE 485
LH++ H + + N+LL +I DFGLA R+ DG + APE
Sbjct: 127 LHAQ--HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 184
Query: 486 VTDARKVSQKADVYSFGVLLLELLT 510
K +DV+SFGV L ELLT
Sbjct: 185 CLKECKFYYASDVWSFGVTLYELLT 209
>pdb|3BEL|A Chain A, X-Ray Structure Of Egfr In Complex With Oxime Inhibitor
pdb|2RGP|A Chain A, Structure Of Egfr In Complex With Hydrazone, A Potent Dual
Inhibitor
Length = 315
Score = 65.1 bits (157), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 15 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 74
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 75 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 127
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 128 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 185
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 186 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 234
>pdb|4E1Z|A Chain A, Structure Of Mouse Tyk-2 Complexed To A 3-Aminoindazole
Inhibitor
Length = 291
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 64/205 (31%), Positives = 98/205 (47%), Gaps = 30/205 (14%)
Query: 325 LGKGTFGT----AYKATLE-MGIVVAVKRLKDVTVSEKE--FREKMEVVGSMDHENLVPL 377
LG+G FG Y T + G +VAVK LK+ + ++ ++E++ ++ HE++V
Sbjct: 17 LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKEGCGPQLRSGWQREIEILRTLYHEHIVKY 76
Query: 378 RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASR---AIAY 432
+ + EK LV +Y+P+GSL L P + + L L A + +AY
Sbjct: 77 KGCCEDQGEKSVQLVMEYVPLGSLRDYL---------PRHCVGLAQLLLFAQQICEGMAY 127
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DG-----YRAPE 485
LH++ H + + N+LL +I DFGLA R+ DG + APE
Sbjct: 128 LHAQ--HYIHRALAARNVLLDNDRLVKIGDFGLAKAVPEGHEYYRVREDGDSPVFWYAPE 185
Query: 486 VTDARKVSQKADVYSFGVLLLELLT 510
K +DV+SFGV L ELLT
Sbjct: 186 CLKECKFYYASDVWSFGVTLYELLT 210
>pdb|3G2F|A Chain A, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
pdb|3G2F|B Chain B, Crystal Structure Of The Kinase Domain Of Bone
Morphogenetic Protein Receptor Type Ii (Bmpr2) At 2.35 A
Resolution
Length = 336
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/218 (27%), Positives = 92/218 (42%), Gaps = 38/218 (17%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPL----- 377
E++G+G +G YK +L+ VAVK + + V M+H+N+
Sbjct: 19 ELIGRGRYGAVYKGSLDER-PVAVKVFSFANRQNFINEKNIYRVPLMEHDNIARFIVGDE 77
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK- 436
R R E LLV +Y P GSL L + +W + LA +R +AYLH++
Sbjct: 78 RVTADGRMEYLLVMEYYPNGSLXKYLSLHTS------DWVSSCRLAHSVTRGLAYLHTEL 131
Query: 437 ------GPANSHGNIKSSNILLSKSYEARISDFGLA------HLASPSSTPNRIDG---- 480
PA SH ++ S N+L+ ISDFGL+ L P N
Sbjct: 132 PRGDHYKPAISHRDLNSRNVLVKNDGTCVISDFGLSMRLTGNRLVRPGEEDNAAISEVGT 191
Query: 481 --YRAPEV-------TDARKVSQKADVYSFGVLLLELL 509
Y APEV D ++ D+Y+ G++ E+
Sbjct: 192 IRYMAPEVLEGAVNLRDXESALKQVDMYALGLIYWEIF 229
>pdb|2J5E|A Chain A, Crystal Structure Of Egfr Kinase Domain In Complex With An
Irreversible Inhibitor 13-Jab
Length = 327
Score = 64.7 bits (156), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/212 (26%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 81 RLLGICLTSTVQLITQ-LMPFGXLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 134 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|3FZO|A Chain A, Crystal Structure Of Pyk2-Apo, Proline-Rich Tyrosine
Kinase
pdb|3FZP|A Chain A, Crystal Structure Of Pyk2 Complexed With Atpgs
pdb|3FZR|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-431396
pdb|3FZS|A Chain A, Crystal Structure Of Pyk2 Complexed With Birb796
pdb|3FZT|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-4618433
pdb|3H3C|A Chain A, Crystal Structure Of Pyk2 In Complex With Sulfoximine-
Substituted Trifluoromethylpyrimidine Analog
pdb|3ET7|A Chain A, Crystal Structure Of Pyk2 Complexed With Pf-2318841
Length = 277
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 324 VLGKGTFGTAYKATLE----MGIVVAVKRLK-DVTVSEKE-FREKMEVVGSMDHENLVPL 377
+LG+G FG Y+ I VAVK K D T+ KE F + ++ ++DH ++V L
Sbjct: 15 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 74
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ ++ + P G L L N+ + + T +L +A+AYL S
Sbjct: 75 IGII-EEEPTWIIMELYPYGELGHYLERNKNSLKV----LTLVLYSLQICKAMAYLESIN 129
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDA 489
H +I NIL++ ++ DFGL+ + AS + P + + +PE +
Sbjct: 130 CV--HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK---WMSPESINF 184
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGV 524
R+ + +DV+ F V + E+L+ GK P L N++ +
Sbjct: 185 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 220
>pdb|2WQB|A Chain A, Structure Of The Tie2 Kinase Domain In Complex With A
Thiazolopyrimidine Inhibitor
Length = 324
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/281 (25%), Positives = 127/281 (45%), Gaps = 42/281 (14%)
Query: 323 EVLGKGTFGTAYKATLE---MGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHE-NLVP 376
+V+G+G FG KA ++ + + A+KR+K+ + ++F ++EV+ + H N++
Sbjct: 28 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 87
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTP-----------LNWETRSGLALG 425
L R L +Y P G+L L +R P L+ + A
Sbjct: 88 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 147
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSSTPNRID-GYR 482
+R + YL K H N+ + NIL+ ++Y A+I+DFGL+ T R+ +
Sbjct: 148 VARGMDYLSQK--QFIHRNLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 205
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTA 540
A E + + +DV+S+GVLL E+++ G P + E + LP+
Sbjct: 206 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ------------ 253
Query: 541 EVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEV 581
L + N ++E+ L++ C + P RPS A++
Sbjct: 254 ---GYRLEKPLNCDDEVYDLMR---QCWREKPYERPSFAQI 288
>pdb|3CC6|A Chain A, Crystal Structure Of Kinase Domain Of Protein Tyrosine
Kinase 2 Beta (ptk2b)
Length = 281
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 324 VLGKGTFGTAYKATLE----MGIVVAVKRLK-DVTVSEKE-FREKMEVVGSMDHENLVPL 377
+LG+G FG Y+ I VAVK K D T+ KE F + ++ ++DH ++V L
Sbjct: 19 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 78
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ ++ + P G L L N+ + L T +L +A+AYL S
Sbjct: 79 IGII-EEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICKAMAYLESIN 133
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDA 489
H +I NIL++ ++ DFGL+ + AS + P + + +PE +
Sbjct: 134 CV--HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK---WMSPESINF 188
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGV 524
R+ + +DV+ F V + E+L+ GK P L N++ +
Sbjct: 189 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 224
>pdb|1F3M|C Chain C, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1F3M|D Chain D, Crystal Structure Of Human SerineTHREONINE KINASE PAK1
pdb|1YHW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With One Point
Mutations (K299r)
Length = 297
Score = 64.7 bits (156), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 94/198 (47%), Gaps = 14/198 (7%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAY 380
E +G+G GT Y A + G VA++++ +KE ++ V+ + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
Y DE +V +Y+ GSL+ ++ T ++ + + +A+ +LHS
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQVI- 138
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS----STPNRIDGYRAPEVTDARKVSQKA 496
H +IKS NILL +++DFG +P ST + APEV + K
Sbjct: 139 -HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSTMVGTPYWMAPEVVTRKAYGPKV 197
Query: 497 DVYSFGVLLLELLTGKAP 514
D++S G++ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4H1J|A Chain A, Crystal Structure Of Pyk2 With The Pyrazole 13a
pdb|4H1M|A Chain A, Crystal Structure Of Pyk2 With The Indole 10c
Length = 293
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 102/216 (47%), Gaps = 25/216 (11%)
Query: 324 VLGKGTFGTAYKATLE----MGIVVAVKRLK-DVTVSEKE-FREKMEVVGSMDHENLVPL 377
+LG+G FG Y+ I VAVK K D T+ KE F + ++ ++DH ++V L
Sbjct: 31 ILGEGFFGEVYEGVYTNHKGEKINVAVKTCKKDCTLDNKEKFMSEAVIMKNLDHPHIVKL 90
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ ++ + P G L L N+ + L T +L +A+AYL S
Sbjct: 91 IGII-EEEPTWIIMELYPYGELGHYLERNKNS----LKVLTLVLYSLQICKAMAYLESIN 145
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDA 489
H +I NIL++ ++ DFGL+ + AS + P + + +PE +
Sbjct: 146 CV--HRDIAVRNILVASPECVKLGDFGLSRYIEDEDYYKASVTRLPIK---WMSPESINF 200
Query: 490 RKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGV 524
R+ + +DV+ F V + E+L+ GK P L N++ +
Sbjct: 201 RRFTTASDVWMFAVCMWEILSFGKQPFFWLENKDVI 236
>pdb|3A7F|A Chain A, Human Mst3 Kinase
pdb|3A7G|A Chain A, Human Mst3 Kinase
pdb|3A7G|B Chain B, Human Mst3 Kinase
pdb|3A7H|A Chain A, Human Mst3 Kinase In Complex With Atp
pdb|3A7H|B Chain B, Human Mst3 Kinase In Complex With Atp
pdb|3A7I|A Chain A, Human Mst3 Kinase In Complex With Adenine
pdb|3A7J|A Chain A, Human Mst3 Kinase In Complex With Mnadp
Length = 303
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/213 (28%), Positives = 100/213 (46%), Gaps = 16/213 (7%)
Query: 313 DLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHE 372
D E+L E +GKG+FG +K V ++ D+ +E E + + + +
Sbjct: 19 DPEELF-TKLEKIGKGSFGEVFKGIDNRTQKVVAIKIIDLEEAEDEIEDIQQEITVLSQC 77
Query: 373 NLVPLRAYY--YSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+ + YY Y +D KL ++ +Y+ GS LL PL+ + + +
Sbjct: 78 DSPYVTKYYGSYLKDTKLWIIMEYLGGGSALDLLEPG------PLDETQIATILREILKG 131
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDG---YRAPE 485
+ YLHS+ H +IK++N+LLS+ E +++DFG+A L N G + APE
Sbjct: 132 LDYLHSE--KKIHRDIKAANVLLSEHGEVKLADFGVAGQLTDTQIKRNXFVGTPFWMAPE 189
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
V KAD++S G+ +EL G+ P L
Sbjct: 190 VIKQSAYDSKADIWSLGITAIELARGEPPHSEL 222
>pdb|2UV2|A Chain A, Crystal Structure Of Human Ste20-Like Kinase Bound To
4-(4-(
5-Cyclopropyl-1h-Pyrazol-3-Ylamino)-Quinazolin-2-
Ylamino)- Phenyl)-Acetonitrile
Length = 287
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 59/212 (27%), Positives = 104/212 (49%), Gaps = 25/212 (11%)
Query: 323 EVLGK-GTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKM---EVVGSMDHENLVP-L 377
E++G+ G FG YKA + V+A ++ D T SE+E + M +++ S DH N+V L
Sbjct: 15 EIIGELGDFGKVYKAQNKETSVLAAAKVID-TKSEEELEDYMVEIDILASCDHPNIVKLL 73
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSA-LLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
A+YY + +L+ ++ G++ A +L R + + + L A+ YLH
Sbjct: 74 DAFYYENNLWILI-EFCAGGAVDAVMLELERPLTESQIQVVCKQTL-----DALNYLHDN 127
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEV----- 486
H ++K+ NIL + + +++DFG++ + + R + APEV
Sbjct: 128 KII--HRDLKAGNILFTLDGDIKLADFGVSAKNTRTXIQRRDSFIGTPYWMAPEVVMCET 185
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
+ R KADV+S G+ L+E+ + P L
Sbjct: 186 SKDRPYDYKADVWSLGITLIEMAEIEPPHHEL 217
>pdb|1YHV|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Two Point
Mutations (K299r, T423e)
pdb|2HY8|1 Chain 1, Pak1 Complex With St2001
Length = 297
Score = 64.3 bits (155), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAY 380
E +G+G GT Y A + G VA++++ +KE ++ V+ + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
Y DE +V +Y+ GSL+ ++ T ++ + + +A+ +LHS
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQVI- 138
Query: 441 SHGNIKSSNILLSKSYEARISDFGL-AHLASPSSTPNRIDG---YRAPEVTDARKVSQKA 496
H +IKS NILL +++DFG A + S + + G + APEV + K
Sbjct: 139 -HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSEMVGTPYWMAPEVVTRKAYGPKV 197
Query: 497 DVYSFGVLLLELLTGKAP 514
D++S G++ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|2RFD|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFD|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|A Chain A, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|B Chain B, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|C Chain C, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
pdb|2RFE|D Chain D, Crystal Structure Of The Complex Between The Egfr Kinase
Domain And A Mig6 Peptide
Length = 324
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 60/229 (26%), Positives = 104/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 18 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 77
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + + + YL
Sbjct: 78 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAEGMNYL 130
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 131 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 188
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 189 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 237
>pdb|1FOT|A Chain A, Structure Of The Unliganded Camp-Dependent Protein Kinase
Catalytic Subunit From Saccharomyces Cerevisiae
Length = 318
Score = 63.9 bits (154), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/200 (28%), Positives = 93/200 (46%), Gaps = 21/200 (10%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLK-DVTVSEKEFREKME---VVGSMDHENLVPLRA 379
LG G+FG + + G A+K LK ++ V K+ + ++ + H ++ +
Sbjct: 14 LGTGSFGRVHLIRSRHNGRYYAMKVLKKEIVVRLKQVEHTNDERLMLSIVTHPFIIRMWG 73
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ + ++ DY+ G L +LL R + R P A A+ YLHSK
Sbjct: 74 TFQDAQQIFMIMDYIEGGELFSLL---RKSQRFPN--PVAKFYAAEVCLALEYLHSKDII 128
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKVSQ 494
+ ++K NILL K+ +I+DFG A + TP+ Y APEV + ++
Sbjct: 129 --YRDLKPENILLDKNGHIKITDFGFAKYVPDVTYXLCGTPD----YIAPEVVSTKPYNK 182
Query: 495 KADVYSFGVLLLELLTGKAP 514
D +SFG+L+ E+L G P
Sbjct: 183 SIDWWSFGILIYEMLAGYTP 202
>pdb|3Q52|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain
pdb|3Q53|A Chain A, Structure Of Phosphorylated Pak1 Kinase Domain In Complex
With Atp
Length = 306
Score = 63.9 bits (154), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAY 380
E +G+G GT Y A + G VA++++ +KE ++ V+ + N+V
Sbjct: 27 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 86
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
Y DE +V +Y+ GSL+ ++ T ++ + + +A+ +LHS
Sbjct: 87 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQVI- 139
Query: 441 SHGNIKSSNILLSKSYEARISDFGL-AHLASPSSTPNRIDG---YRAPEVTDARKVSQKA 496
H +IKS NILL +++DFG A + S + + G + APEV + K
Sbjct: 140 -HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 198
Query: 497 DVYSFGVLLLELLTGKAP 514
D++S G++ +E++ G+ P
Sbjct: 199 DIWSLGIMAIEMIEGEPP 216
>pdb|3FXZ|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Lambda-Fl172
pdb|3FY0|A Chain A, Crystal Structure Of Pak1 Kinase Domain With Ruthenium
Complex Dw1
pdb|4DAW|A Chain A, Crystal Structure Of Pak1 Kinase Domain With The Ruthenium
Phthalimide Complex
Length = 297
Score = 63.5 bits (153), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 96/198 (48%), Gaps = 14/198 (7%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAY 380
E +G+G GT Y A + G VA++++ +KE ++ V+ + N+V
Sbjct: 26 EKIGQGASGTVYTAMDVATGQEVAIRQMNLQQQPKKELIINEILVMRENKNPNIVNYLDS 85
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
Y DE +V +Y+ GSL+ ++ T ++ + + +A+ +LHS
Sbjct: 86 YLVGDELWVVMEYLAGGSLTDVV------TETCMDEGQIAAVCRECLQALEFLHSNQVI- 138
Query: 441 SHGNIKSSNILLSKSYEARISDFGL-AHLASPSSTPNRIDG---YRAPEVTDARKVSQKA 496
H +IKS NILL +++DFG A + S + + G + APEV + K
Sbjct: 139 -HRDIKSDNILLGMDGSVKLTDFGFCAQITPEQSKRSXMVGTPYWMAPEVVTRKAYGPKV 197
Query: 497 DVYSFGVLLLELLTGKAP 514
D++S G++ +E++ G+ P
Sbjct: 198 DIWSLGIMAIEMIEGEPP 215
>pdb|4I21|A Chain A, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
pdb|4I21|B Chain B, Crystal Structure Of L858r + T790m Egfr Kinase Domain In
Complex With Mig6 Peptide
Length = 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 83 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFG A L +G + P E
Sbjct: 136 EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|3UG1|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN The Apo Form
pdb|3UG2|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Gefitinib
pdb|3VJN|A Chain A, Crystal Structure Of The Mutated Egfr Kinase Domain
(G719sT790M) IN Complex With Amppnp
Length = 334
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VL G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 88 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 141 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|3W2O|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Tak-285
pdb|3W2P|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 2
pdb|3W2Q|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Hki-272
pdb|3W2R|A Chain A, Egfr Kinase Domain T790m/l858r Mutant With Compound 4
Length = 331
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 105/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 25 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 84
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 85 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 137
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFG A L +G + P E
Sbjct: 138 EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 195
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 196 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 244
>pdb|4I1Z|A Chain A, Crystal Structure Of The Monomeric (v948r) Form Of The
Gefitinib/erlotinib Resistant Egfr Kinase Domain
L858r+t790m
pdb|4I22|A Chain A, Structure Of The Monomeric (v948r)gefitinib/erlotinib
Resistant Double Mutant (l858r+t790m) Egfr Kinase Domain
Co-crystallized With Gefitinib
Length = 329
Score = 62.8 bits (151), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 98/212 (46%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L++ MP G L + H + + LNW + ++ + YL
Sbjct: 83 RLLGICLTSTVQLIMQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFG A L +G + P E
Sbjct: 136 EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|2ITN|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Amp-Pnp
pdb|2ITO|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Iressa
pdb|2ITP|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Aee788
pdb|2ITQ|A Chain A, Crystal Structure Of Egfr Kinase Domain G719s Mutation In
Complex With Afn941
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VL G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 21 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 81 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 134 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 240
>pdb|2EB2|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (G719s)
Length = 334
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VL G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 28 KVLSSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 88 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 141 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|2OO8|X Chain X, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2OSC|A Chain A, Synthesis, Structural Analysis, And Sar Studies Of
Triazine Derivatives As Potent, Selective Tie-2
Inhibitors
pdb|2P4I|A Chain A, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|2P4I|B Chain B, Evolution Of A Highly Selective And Potent
2-(Pyridin-2-Yl)- 1,3,5-Triazine Tie-2 Kinase Inhibitor
pdb|3L8P|A Chain A, Crystal Structure Of Cytoplasmic Kinase Domain Of Tie2
Complexed With Inhibitor Cep11207
Length = 317
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 42/281 (14%)
Query: 323 EVLGKGTFGTAYKATLE---MGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHE-NLVP 376
+V+G+G FG KA ++ + + A+KR+K+ + ++F ++EV+ + H N++
Sbjct: 21 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 80
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTP-----------LNWETRSGLALG 425
L R L +Y P G+L L +R P L+ + A
Sbjct: 81 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 140
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSSTPNRID-GYR 482
+R + YL K H ++ + NIL+ ++Y A+I+DFGL+ T R+ +
Sbjct: 141 VARGMDYLSQK--QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 198
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTA 540
A E + + +DV+S+GVLL E+++ G P + E + LP+
Sbjct: 199 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ------------ 246
Query: 541 EVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEV 581
L + N ++E+ L++ C + P RPS A++
Sbjct: 247 ---GYRLEKPLNCDDEVYDLMR---QCWREKPYERPSFAQI 281
>pdb|1FVR|A Chain A, Tie2 Kinase Domain
pdb|1FVR|B Chain B, Tie2 Kinase Domain
Length = 327
Score = 62.8 bits (151), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 70/281 (24%), Positives = 127/281 (45%), Gaps = 42/281 (14%)
Query: 323 EVLGKGTFGTAYKATLE---MGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHE-NLVP 376
+V+G+G FG KA ++ + + A+KR+K+ + ++F ++EV+ + H N++
Sbjct: 31 DVIGEGNFGQVLKARIKKDGLRMDAAIKRMKEYASKDDHRDFAGELEVLCKLGHHPNIIN 90
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTP-----------LNWETRSGLALG 425
L R L +Y P G+L L +R P L+ + A
Sbjct: 91 LLGACEHRGYLYLAIEYAPHGNLLDFLRKSRVLETDPAFAIANSTASTLSSQQLLHFAAD 150
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSSTPNRID-GYR 482
+R + YL K H ++ + NIL+ ++Y A+I+DFGL+ T R+ +
Sbjct: 151 VARGMDYLSQK--QFIHRDLAARNILVGENYVAKIADFGLSRGQEVYVKKTMGRLPVRWM 208
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD-LPRWVQSVVKEEWTA 540
A E + + +DV+S+GVLL E+++ G P + E + LP+
Sbjct: 209 AIESLNYSVYTTNSDVWSYGVLLWEIVSLGGTPYCGMTCAELYEKLPQ------------ 256
Query: 541 EVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEV 581
L + N ++E+ L++ C + P RPS A++
Sbjct: 257 ---GYRLEKPLNCDDEVYDLMR---QCWREKPYERPSFAQI 291
>pdb|2ITT|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Aee788
pdb|2ITU|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Afn941
pdb|2ITV|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Amp-pnp
pdb|2ITZ|A Chain A, Crystal Structure Of Egfr Kinase Domain L858r Mutation In
Complex With Iressa
Length = 327
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 21 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 80
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 81 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 133
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFG A L +G + P E
Sbjct: 134 EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 191
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 192 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 223
>pdb|4EBW|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
pdb|4EBV|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With Novel Allosteric Inhibitor
Length = 304
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 74/310 (23%), Positives = 126/310 (40%), Gaps = 53/310 (17%)
Query: 301 NLVF---FGKGDRAFDLEDLLRASAEVLGKGTFGTA----YKATLEMGIVVAVKRLKDVT 353
NL F G R ++++ +G+G FG Y + + VA+K K+ T
Sbjct: 19 NLYFQGAMGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCT 78
Query: 354 ---VSEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG 410
V EK +E + + DH ++V L + + ++ + +G L + L + +
Sbjct: 79 SDSVREKFLQEAL-TMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS- 135
Query: 411 RTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS 470
L+ + A S A+AYL SK H +I + N+L+S + ++ DFGL+
Sbjct: 136 ---LDLASLILYAYQLSTALAYLESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYME 190
Query: 471 PSSTPNRIDG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGV 524
S+ G + APE + R+ + +DV+ FGV + E+L G P Q + N + +
Sbjct: 191 DSTYYKASKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVI 250
Query: 525 DLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV------QLLQLAINCTAQYPDNRPSM 578
R +N E + L L C A P RP
Sbjct: 251 G-----------------------RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRF 287
Query: 579 AEVTSQIEEI 588
E+ +Q+ I
Sbjct: 288 TELKAQLSTI 297
>pdb|2EB3|A Chain A, Crystal Structure Of Mutated Egfr Kinase Domain (L858r) In
Complex With Amppnp
Length = 334
Score = 62.4 bits (150), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/229 (25%), Positives = 104/229 (45%), Gaps = 32/229 (13%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTV--SEKEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 28 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 87
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 88 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 140
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFG A L +G + P E
Sbjct: 141 EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 198
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL-------LNEEGVDLPR 528
R + ++DV+S+GV + EL+T G P + + E+G LP+
Sbjct: 199 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGIPASEISSILEKGERLPQ 247
>pdb|2C30|A Chain A, Crystal Structure Of The Human P21-Activated Kinase 6
Length = 321
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/208 (28%), Positives = 104/208 (50%), Gaps = 22/208 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKM--EVVGSMD--H 371
LL S +G+G+ G A + G VAVK + + +++ RE + EVV D H
Sbjct: 45 LLLDSYVKIGEGSTGIVCLAREKHSGRQVAVKMMD---LRKQQRRELLFNEVVIMRDYQH 101
Query: 372 ENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
N+V + Y +E ++ +++ G+L+ ++ R LN E + + +A+A
Sbjct: 102 FNVVEMYKSYLVGEELWVLMEFLQGGALTDIVSQVR------LNEEQIATVCEAVLQALA 155
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-----IDGYRAPEV 486
YLH++G H +IKS +ILL+ ++SDFG S P R + APEV
Sbjct: 156 YLHAQGVI--HRDIKSDSILLTLDGRVKLSDFGFCAQIS-KDVPKRKXLVGTPYWMAPEV 212
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + D++S G++++E++ G+ P
Sbjct: 213 ISRSLYATEVDIWSLGIMVIEMVDGEPP 240
>pdb|3GOP|A Chain A, Crystal Structure Of The Egf Receptor Juxtamembrane And
Kinase Domains
Length = 361
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/208 (26%), Positives = 96/208 (46%), Gaps = 25/208 (12%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+ L++ T + KE ++ V+ S+D+ ++
Sbjct: 55 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIMELREATSPKANKEILDEAYVMASVDNPHVC 114
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 115 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 167
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFGLA L +G + P E
Sbjct: 168 EDRRLV--HRDLAARNVLVKTPQHVKITDFGLAKLLGAEEKEYHAEGGKVPIKWMALESI 225
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAP 514
R + ++DV+S+GV + EL+T G P
Sbjct: 226 LHRIYTHQSDVWSYGVTVWELMTFGSKP 253
>pdb|4I20|A Chain A, Crystal Structure Of Monomeric (v948r) Primary Oncogenic
Mutant L858r Egfr Kinase Domain
Length = 329
Score = 62.4 bits (150), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/212 (25%), Positives = 97/212 (45%), Gaps = 25/212 (11%)
Query: 323 EVLGKGTFGTAYKATL-----EMGIVVAVKRLKDVTVSE--KEFREKMEVVGSMDHENLV 375
+VLG G FGT YK ++ I VA+K L++ T + KE ++ V+ S+D+ ++
Sbjct: 23 KVLGSGAFGTVYKGLWIPEGEKVKIPVAIKELREATSPKANKEILDEAYVMASVDNPHVC 82
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYL 433
L + +L+ MP G L + H + + LNW + ++ + YL
Sbjct: 83 RLLGICLTSTVQLITQ-LMPFGCLLDYVREHKDNIGSQYLLNW------CVQIAKGMNYL 135
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYRAP------EVT 487
+ H ++ + N+L+ +I+DFG A L +G + P E
Sbjct: 136 EDRRLV--HRDLAARNVLVKTPQHVKITDFGRAKLLGAEEKEYHAEGGKVPIKWMALESI 193
Query: 488 DARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
R + ++DV+S+GV + EL+T G P +
Sbjct: 194 LHRIYTHQSDVWSYGVTVWELMTFGSKPYDGI 225
>pdb|1MP8|A Chain A, Crystal Structure Of Focal Adhesion Kinase (Fak)
pdb|4I4F|A Chain A, Structure Of Focal Adhesion Kinase Catalytic Domain In
Complex With An Allosteric Binding Pyrazolobenzothiazine
Compound
Length = 281
Score = 62.0 bits (149), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 71/303 (23%), Positives = 123/303 (40%), Gaps = 50/303 (16%)
Query: 305 FGKGDRAFDLEDLLRASAEVLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEK 357
G R ++++ +G+G FG Y + + VA+K K+ T V EK
Sbjct: 3 MGSSTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREK 62
Query: 358 EFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWE 417
+E + + DH ++V L + + ++ + +G L + L + + L+
Sbjct: 63 FLQEAL-TMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLA 116
Query: 418 TRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR 477
+ A S A+AYL SK H +I + N+L+S + ++ DFGL+ S+
Sbjct: 117 SLILYAYQLSTALAYLESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKA 174
Query: 478 IDG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
G + APE + R+ + +DV+ FGV + E+L G P Q + N + +
Sbjct: 175 SKGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG------ 228
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQI 585
R +N E + L L C A P RP E+ +Q+
Sbjct: 229 -----------------RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQL 271
Query: 586 EEI 588
I
Sbjct: 272 STI 274
>pdb|2J0L|A Chain A, Crystal Structure Of A The Active Conformation Of The
Kinase Domain Of Focal Adhesion Kinase With A
Phosphorylated Activation Loop
Length = 276
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 324 VLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVP 376
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVK 75
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESK 130
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARK 491
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTXXKASKGKLPIKWMAPESINFRR 188
Query: 492 VSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY 550
+ +DV+ FGV + E+L G P Q + N + + R
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RI 225
Query: 551 QNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+N E + L L C A P RP E+ +Q+ I
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3GGF|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
pdb|3GGF|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
Mst4 In Complex With An Quinazolin
Length = 301
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 51/209 (24%), Positives = 96/209 (45%), Gaps = 16/209 (7%)
Query: 313 DLEDLLRASAEVLGKGTFGTAYKAT---LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSM 369
D E+L E +GKG+FG +K + + + + L++ ++ ++++ V+
Sbjct: 20 DPEELF-TKLERIGKGSFGEVFKGIDNRTQQVVAIKIIDLEEAEDEIEDIQQEITVLSQC 78
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
D + Y + ++ +Y+ GS LL P + + + +
Sbjct: 79 DSSYVTKYYGSYLKGSKLWIIMEYLGGGSALDLLRAG------PFDEFQIATMLKEILKG 132
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDG---YRAPE 485
+ YLHS+ H +IK++N+LLS+ + +++DFG+A L N G + APE
Sbjct: 133 LDYLHSE--KKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNTFVGTPFWMAPE 190
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
V KAD++S G+ +EL G+ P
Sbjct: 191 VIQQSAYDSKADIWSLGITAIELAKGEPP 219
>pdb|3PWY|A Chain A, Crystal Structure Of An Extender (Spd28345)-Modified Human
Pdk1 Complex 2
Length = 311
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 59/209 (28%), Positives = 99/209 (47%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 95
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 96 KL-YFTFQDDEKLYFGLSYAKNGCLLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 150 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 207
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ S+ +D+++ G ++ +L+ G P +A
Sbjct: 208 EKSASKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3H9R|A Chain A, Crystal Structure Of The Kinase Domain Of Type I Activin
Receptor (Acvr1) In Complex With Fkbp12 And Dorsomorphin
Length = 330
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 39/214 (18%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG +G ++ + + G VAVK + EK + + E+ + + HEN++ A
Sbjct: 43 ECVGKGRYGEVWRGSWQ-GENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIAS 99
Query: 381 ----YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH-- 434
+S + L+ Y MGSL L T L+ + + L + +A+LH
Sbjct: 100 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 153
Query: 435 ---SKG-PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID----------G 480
++G PA +H ++KS NIL+ K+ + I+D GLA + S S+ N++D
Sbjct: 154 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST--NQLDVGNNPRVGTKR 211
Query: 481 YRAPEV------TDARKVSQKADVYSFGVLLLEL 508
Y APEV D ++ D+++FG++L E+
Sbjct: 212 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 245
>pdb|2PZR|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZR|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K641r Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 61.6 bits (148), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 124/302 (41%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ RI+DFGLA N ID
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMRIADFGLAR------DINNID 211
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 272 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 314
Query: 587 EI 588
I
Sbjct: 315 RI 316
>pdb|3MTF|A Chain A, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3MTF|B Chain B, Crystal Structure Of The Acvr1 Kinase In Complex With A 2-
Aminopyridine Inhibitor
pdb|3OOM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00507
pdb|3Q4U|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|B Chain B, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|C Chain C, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
pdb|3Q4U|D Chain D, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With Ldn- 193189
Length = 301
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 39/214 (18%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG +G ++ + + G VAVK + EK + + E+ + + HEN++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 381 ----YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH-- 434
+S + L+ Y MGSL L T L+ + + L + +A+LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 435 ---SKG-PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID----------G 480
++G PA +H ++KS NIL+ K+ + I+D GLA + S S+ N++D
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST--NQLDVGNNPRVGTKR 182
Query: 481 YRAPEV------TDARKVSQKADVYSFGVLLLEL 508
Y APEV D ++ D+++FG++L E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|4AAA|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain
pdb|4BBM|A Chain A, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
pdb|4BBM|B Chain B, Crystal Structure Of The Human Cdkl2 Kinase Domain With
Bound Tcs 2312
Length = 331
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 75/282 (26%), Positives = 123/282 (43%), Gaps = 33/282 (11%)
Query: 324 VLGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLR 378
++G+G++G K + G +VA+K+ D V + RE ++++ + HENLV L
Sbjct: 32 LVGEGSYGMVMKCRNKDTGRIVAIKKFLESDDDKMVKKIAMRE-IKLLKQLRHENLVNLL 90
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ LV +++ L L G L+++ I + HS
Sbjct: 91 EVCKKKKRWYLVFEFVDHTILDDLELFPNG-----LDYQVVQKYLFQIINGIGFCHSHNI 145
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPE--VTDARKV 492
H +IK NIL+S+S ++ DFG A LA+P + YRAPE V D K
Sbjct: 146 I--HRDIKPENILVSQSGVVKLCDFGFARTLAAPGEVYDDEVATRWYRAPELLVGDV-KY 202
Query: 493 SQKADVYSFGVLLLELLTGKA--PTQALLNE-------EGVDLPRWVQSVVKEEWTAEVF 543
+ DV++ G L+ E+ G+ P + +++ G +PR + K A V
Sbjct: 203 GKAVDVWAIGCLVTEMFMGEPLFPGDSDIDQLYHIMMCLGNLIPRHQELFNKNPVFAGVR 262
Query: 544 DLELLRYQNVEEEMVQL----LQLAINCTAQYPDNRPSMAEV 581
E+ + +E +L + LA C PD RP AE+
Sbjct: 263 LPEIKEREPLERRYPKLSEVVIDLAKKCLHIDPDKRPFCAEL 304
>pdb|2ETM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2ETM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain
Complexed With 7h-Pyrrolo [2,3-D] Pyrimidine Derivative
pdb|2IJM|A Chain A, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
pdb|2IJM|B Chain B, Crystal Structure Of Focal Adhesion Kinase Domain With 2
Molecules In The Asymmetric Unit Complexed With Adp And
Atp
Length = 281
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/302 (23%), Positives = 123/302 (40%), Gaps = 50/302 (16%)
Query: 306 GKGDRAFDLEDLLRASAEVLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKE 358
G R ++++ +G+G FG Y + + VA+K K+ T V EK
Sbjct: 1 GASTRDYEIQRERIELGRCIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKF 60
Query: 359 FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
+E + + DH ++V L + + ++ + +G L + L + + L+ +
Sbjct: 61 LQEAL-TMRQFDHPHIVKLIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLAS 114
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI 478
A S A+AYL SK H +I + N+L+S + ++ DFGL+ S+
Sbjct: 115 LILYAYQLSTALAYLESK--RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKAS 172
Query: 479 DG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
G + APE + R+ + +DV+ FGV + E+L G P Q + N + +
Sbjct: 173 KGKLPIKWMAPESINFRRFTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG------- 225
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIE 586
R +N E + L L C A P RP E+ +Q+
Sbjct: 226 ----------------RIENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLS 269
Query: 587 EI 588
I
Sbjct: 270 TI 271
>pdb|3LXN|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
pdb|3LXP|A Chain A, Structural And Thermodynamic Characterization Of The Tyk2
And Jak3 Kinase Domains In Complex With Cp-690550 And
Cmp-6
Length = 318
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/233 (27%), Positives = 106/233 (45%), Gaps = 25/233 (10%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEVLGKGTFGT----AYKATLE-MGIVVAVKRLK-DVTV 354
++F G GD + L+ + LG+G FG Y T + G +VAVK LK D
Sbjct: 16 EVLFQGPGDPTVFHKRYLKKIRD-LGEGHFGKVSLYCYDPTNDGTGEMVAVKALKADAGP 74
Query: 355 SEKE-FREKMEVVGSMDHENLVPLRAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGR 411
+ ++++++++ ++ HE+++ + LV +Y+P+GSL L R
Sbjct: 75 QHRSGWKQEIDILRTLYHEHIIKYKGCCEDAGAASLQLVMEYVPLGSLRDYL------PR 128
Query: 412 TPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASP 471
+ A +AYLH++ H ++ + N+LL +I DFGLA
Sbjct: 129 HSIGLAQLLLFAQQICEGMAYLHAQ--HYIHRDLAARNVLLDNDRLVKIGDFGLAKAVPE 186
Query: 472 SSTPNRI--DG-----YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQA 517
R+ DG + APE K +DV+SFGV L ELLT +Q+
Sbjct: 187 GHEXYRVREDGDSPVFWYAPECLKEYKFYYASDVWSFGVTLYELLTHCDSSQS 239
>pdb|3FPQ|A Chain A, Crystal Structure Of The Kinase Domain Of Wnk1
pdb|3FPQ|B Chain B, Crystal Structure Of The Kinase Domain Of Wnk1
Length = 290
Score = 61.2 bits (147), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 63/222 (28%), Positives = 99/222 (44%), Gaps = 19/222 (8%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKD--VTVSEKE-FREKMEVVGSMDHENLVPLRAY 380
+G+G+F T YK E + VA L+D +T SE++ F+E+ E + + H N+V
Sbjct: 34 IGRGSFKTVYKGLDTETTVEVAWCELQDRKLTKSERQRFKEEAEXLKGLQHPNIVRFYDS 93
Query: 381 YYS----RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+ S + +LV + G+L L + L R L + + +LH++
Sbjct: 94 WESTVKGKKCIVLVTELXTSGTLKTYLKRFKVXKIKVLRSWCRQIL-----KGLQFLHTR 148
Query: 437 GPANSHGNIKSSNILLS-KSYEARISDFGLAHLASPSSTPNRIDG--YRAPEVTDARKVS 493
P H ++K NI ++ + +I D GLA L S I + APE + K
Sbjct: 149 TPPIIHRDLKCDNIFITGPTGSVKIGDLGLATLKRASFAKAVIGTPEFXAPEXYE-EKYD 207
Query: 494 QKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVK 535
+ DVY+FG LE T + P N + R V S VK
Sbjct: 208 ESVDVYAFGXCXLEXATSEYPYSECQN--AAQIYRRVTSGVK 247
>pdb|4DYM|A Chain A, Crystal Structure Of The Acvr1 Kinase Domain In Complex
With The Imidazo[1,2-B]pyridazine Inhibitor K00135
Length = 301
Score = 61.2 bits (147), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 61/214 (28%), Positives = 105/214 (49%), Gaps = 39/214 (18%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG +G ++ + + G VAVK + EK + + E+ + + HEN++ A
Sbjct: 14 ECVGKGRYGEVWRGSWQ-GENVAVKIFS--SRDEKSWFRETELYNTVMLRHENILGFIAS 70
Query: 381 ----YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH-- 434
+S + L+ Y MGSL L T L+ + + L + +A+LH
Sbjct: 71 DMTSRHSSTQLWLITHYHEMGSLYDYLQ------LTTLDTVSCLRIVLSIASGLAHLHIE 124
Query: 435 ---SKG-PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID----------G 480
++G PA +H ++KS NIL+ K+ + I+D GLA + S S+ N++D
Sbjct: 125 IFGTQGKPAIAHRDLKSKNILVKKNGQCCIADLGLAVMHSQST--NQLDVGNNPRVGTKR 182
Query: 481 YRAPEV------TDARKVSQKADVYSFGVLLLEL 508
Y APEV D ++ D+++FG++L E+
Sbjct: 183 YMAPEVLDETIQVDCFDSYKRVDIWAFGLVLWEV 216
>pdb|2JKK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
pdb|2JKO|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 324 VLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVP 376
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVK 75
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESK 130
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARK 491
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 131 --RFVHRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 492 VSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY 550
+ +DV+ FGV + E+L G P Q + N + + R
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RI 225
Query: 551 QNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+N E + L L C A P RP E+ +Q+ I
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2PZ5|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
pdb|2PZ5|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549t Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 100 HKNIITLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNID 211
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 272 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 314
Query: 587 EI 588
I
Sbjct: 315 RI 316
>pdb|3B2T|A Chain A, Structure Of Phosphotransferase
pdb|3B2T|B Chain B, Structure Of Phosphotransferase
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/309 (23%), Positives = 126/309 (40%), Gaps = 66/309 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 30 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 86
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 87 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 146
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 147 VSCTYQLARGMEYLASQ--KCIHRDLTARNVLVTENNVMKIADFGLAR------DINNID 198
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 199 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 258
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 259 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 301
Query: 587 EICRSSLQQ 595
I + Q
Sbjct: 302 RILTLTTNQ 310
>pdb|3NAX|A Chain A, Pdk1 In Complex With Inhibitor Mp7
Length = 311
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 92
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 93 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 146
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 147 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 204
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3RI1|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
pdb|3RI1|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr2 Kinase
In Complex With Arq 069
Length = 313
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 32 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 88
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 89 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 148
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 149 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNID 200
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 201 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 260
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 261 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 303
Query: 587 EI 588
I
Sbjct: 304 RI 305
>pdb|2J0M|B Chain B, Crystal Structure A Two-Chain Complex Between The Ferm And
Kinase Domains Of Focal Adhesion Kinase.
pdb|2JKQ|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.8 bits (146), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 324 VLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVP 376
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVK 75
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESK 130
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARK 491
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 492 VSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY 550
+ +DV+ FGV + E+L G P Q + N + + R
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RI 225
Query: 551 QNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+N E + L L C A P RP E+ +Q+ I
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|3GC9|A Chain A, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
pdb|3GC9|B Chain B, The Structure Of P38beta C119s, C162s In Complex With A
Dihydroquinazolinone Inhibitor
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 325 LGKGTFGT---AYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPL 377
+G G +G+ AY A L VAVK+L + + + + +RE + ++ + HEN++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 92
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHG--NRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + D+ + ++ L+ N L+ E L R + Y+HS
Sbjct: 93 LDVFTPATS---IEDFSEVYLVTTLMGADLNNIVKSQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-RIDGYRAPEVT-DARKVS 493
G H ++K SN+ +++ E RI DFGLA A T YRAPE+ + +
Sbjct: 150 AGII--HRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 494 QKADVYSFGVLLLELLTGKA 513
Q D++S G ++ ELL GKA
Sbjct: 208 QTVDIWSVGCIMAELLQGKA 227
>pdb|3PXK|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
pdb|3PXK|B Chain B, Focal Adhesion Kinase Catalytic Domain In Complex With
Pyrrolo[2,3- D]thiazole
Length = 282
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 324 VLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVP 376
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V
Sbjct: 20 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVK 78
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 79 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESK 133
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARK 491
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 134 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 191
Query: 492 VSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY 550
+ +DV+ FGV + E+L G P Q + N + + R
Sbjct: 192 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RI 228
Query: 551 QNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+N E + L L C A P RP E+ +Q+ I
Sbjct: 229 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 272
>pdb|1GJO|A Chain A, The Fgfr2 Tyrosine Kinase Domain
pdb|1OEC|A Chain A, Fgfr2 Kinase Domain
Length = 316
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 35 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 91
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 92 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 151
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 152 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNID 203
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 204 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 263
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 264 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 306
Query: 587 EI 588
I
Sbjct: 307 RI 308
>pdb|2BIY|A Chain A, Structure Of Pdk1-S241a Mutant Kinase Domain
Length = 310
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 93
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 94 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 147
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 148 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANAFVGTAQYVSPELLT 205
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2PVY|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|C Chain C, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome.
pdb|2PVY|D Chain D, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K659n Mutation Responsible For
An Unclassified Craniosynostosis Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNID 211
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 212 YYKNTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 272 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 314
Query: 587 EI 588
I
Sbjct: 315 RI 316
>pdb|3BZ3|A Chain A, Crystal Structure Analysis Of Focal Adhesion Kinase With A
Methanesulfonamide Diaminopyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 324 VLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVP 376
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V
Sbjct: 14 CIGEGQFGDVHQGIYMSPENPALAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVK 72
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 73 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESK 127
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARK 491
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 128 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 185
Query: 492 VSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY 550
+ +DV+ FGV + E+L G P Q + N + + R
Sbjct: 186 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RI 222
Query: 551 QNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+N E + L L C A P RP E+ +Q+ I
Sbjct: 223 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 266
>pdb|2JKM|A Chain A, Focal Adhesion Kinase Catalytic Domain In Complex With
Bis- Anilino Pyrimidine Inhibitor
Length = 276
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 69/284 (24%), Positives = 117/284 (41%), Gaps = 50/284 (17%)
Query: 324 VLGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVP 376
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V
Sbjct: 17 CIGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVK 75
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 76 LIGVI-TENPVWIIMELCTLGELRSFLQVRKYS----LDLASLILYAYQLSTALAYLESK 130
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARK 491
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 131 --RFVHRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRR 188
Query: 492 VSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY 550
+ +DV+ FGV + E+L G P Q + N + + R
Sbjct: 189 FTSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RI 225
Query: 551 QNVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+N E + L L C A P RP E+ +Q+ I
Sbjct: 226 ENGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 269
>pdb|2PWL|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome.
pdb|2PWL|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic N549h Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 124/302 (41%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 100 HKNIIHLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNID 211
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 272 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 314
Query: 587 EI 588
I
Sbjct: 315 RI 316
>pdb|2PSQ|A Chain A, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
pdb|2PSQ|B Chain B, Crystal Structure Of Unphosphorylated Unactivated Wild
Type Fgf Receptor 2 (Fgfr2) Kinase Domain
Length = 370
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAY--------KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG K + + VAVK LKD +EK+ E M+++G
Sbjct: 89 LGEGCFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 145
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 146 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 205
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 206 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDI------NNID 257
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 258 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 317
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+KE + + N E+ +++ +C P RP+ ++ ++
Sbjct: 318 -------LKEGHRMD-------KPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 360
Query: 587 EI 588
I
Sbjct: 361 RI 362
>pdb|3NAY|A Chain A, Pdk1 In Complex With Inhibitor Mp6
pdb|3NAY|B Chain B, Pdk1 In Complex With Inhibitor Mp6
Length = 311
Score = 60.5 bits (145), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 35 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 92
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 93 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 146
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 147 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 204
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 205 EKSACKSSDLWALGCIIYQLVAGLPPFRA 233
>pdb|3KMW|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mgatp)
pdb|3REP|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Mnatp)
Length = 271
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/189 (28%), Positives = 89/189 (47%), Gaps = 14/189 (7%)
Query: 342 IVVAVKRLKDV-TVSEKEFREKMEVVGSMDHENLVPLRAYYYSRD--EKLLVHDYMPMGS 398
IVV V +++D T ++F E+ + H N++P+ S L+ +MP GS
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWMPYGS 95
Query: 399 LSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEA 458
L +LH G ++ AL +R +A+LH+ P + S ++++ + A
Sbjct: 96 LYNVLH--EGTNFV-VDQSQAVKFALDMARGMAFLHTLEPLIPRHALNSRSVMIDEDMTA 152
Query: 459 RISDFGLAHLASPSSTPNRI--DGYRAPEVTDARKVS---QKADVYSFGVLLLELLTGKA 513
RIS +A + +P R+ + APE + + AD++SF VLL EL+T +
Sbjct: 153 RIS---MADVKFSFQSPGRMYAPAWVAPEALQKKPEDTNRRSADMWSFAVLLWELVTREV 209
Query: 514 PTQALLNEE 522
P L N E
Sbjct: 210 PFADLSNME 218
>pdb|3COK|A Chain A, Crystal Structure Of Plk4 Kinase
pdb|3COK|B Chain B, Crystal Structure Of Plk4 Kinase
Length = 278
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 95/204 (46%), Gaps = 23/204 (11%)
Query: 324 VLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVPLR 378
+LGKG+F Y+A ++ G+ VA+K + + + + + ++++ + H +++ L
Sbjct: 18 LLGKGSFAGVYRAESIHTGLEVAIKMIDKKAMYKAGMVQRVQNEVKIHCQLKHPSILELY 77
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
Y+ + LV + G ++ L NR P + + YLHS G
Sbjct: 78 NYFEDSNYVYLVLEMCHNGEMNRYL-KNRVK---PFSENEARHFMHQIITGMLYLHSHGI 133
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSS-------TPNRIDGYRAPEVTDAR 490
H ++ SN+LL+++ +I+DFGLA L P TPN Y +PE+
Sbjct: 134 L--HRDLTLSNLLLTRNMNIKIADFGLATQLKMPHEKHYTLCGTPN----YISPEIATRS 187
Query: 491 KVSQKADVYSFGVLLLELLTGKAP 514
++DV+S G + LL G+ P
Sbjct: 188 AHGLESDVWSLGCMFYTLLIGRPP 211
>pdb|3NUS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment8
pdb|3NUU|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment11
pdb|3NUY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Fragment17
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 14 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 71
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 72 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 125
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 126 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 183
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 184 EKSACKSSDLWALGCIIYQLVAGLPPFRA 212
>pdb|3GP0|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 11 (p38 Beta) In Complex With Nilotinib
Length = 348
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 325 LGKGTFGT---AYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPL 377
+G G +G+ AY A L VAVK+L + + + + +RE + ++ + HEN++ L
Sbjct: 28 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 84
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHG--NRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + D+ + ++ L+ N L+ E L R + Y+HS
Sbjct: 85 LDVFTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 141
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-RIDGYRAPEVT-DARKVS 493
G H ++K SN+ +++ E RI DFGLA A T YRAPE+ + +
Sbjct: 142 AGII--HRDLKPSNVAVNEDCELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 199
Query: 494 QKADVYSFGVLLLELLTGKA 513
Q D++S G ++ ELL GKA
Sbjct: 200 QTVDIWSVGCIMAELLQGKA 219
>pdb|1Z5M|A Chain A, Crystal Structure Of
N1-[3-[[5-bromo-2-[[3-[(1-pyrrolidinylcarbonyl)
Amino]phenyl]amino]-4-pyrimidinyl]amino]propyl]-2,2-
Dimethylpropanediamide Complexed With Human Pdk1
pdb|2PE0|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
5-Hydroxy-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-1,
3-Dihydro- Indol-2-One Complex
pdb|2PE1|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
{2-Oxo-3-[1-(1h-Pyrrol-2-Yl)-Eth-(Z)-Ylidene]-2,
3-Dihydro-1h- Indol-5-Yl}-Urea {bx-517} Complex
pdb|2PE2|A Chain A, Crystal Structure Of Human Phosphoinositide-Dependent
Protein Kinase 1 (Pdk1)
3-{5-[2-Oxo-5-Ureido-1,
2-Dihydro-Indol-(3z)-Ylidenemethyl]-1h-
Pyrrol-3-Yl}-N-(2-Piperidin-1-Yl-Ethyl)-Benzamide
Complex
Length = 286
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 13 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 70
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 71 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 124
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 125 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 182
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 183 EKSACKSSDLWALGCIIYQLVAGLPPFRA 211
>pdb|3GC8|A Chain A, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
pdb|3GC8|B Chain B, The Structure Of P38beta C162s In Complex With A
Dihydroquinazolinone
Length = 370
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/200 (29%), Positives = 96/200 (48%), Gaps = 19/200 (9%)
Query: 325 LGKGTFGT---AYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPL 377
+G G +G+ AY A L VAVK+L + + + + +RE + ++ + HEN++ L
Sbjct: 36 VGSGAYGSVCSAYDARLRQK--VAVKKLSRPFQSLIHARRTYRE-LRLLKHLKHENVIGL 92
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHG--NRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + D+ + ++ L+ N L+ E L R + Y+HS
Sbjct: 93 LDVFTPATS---IEDFSEVYLVTTLMGADLNNIVKCQALSDEHVQFLVYQLLRGLKYIHS 149
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-RIDGYRAPEVT-DARKVS 493
G H ++K SN+ +++ E RI DFGLA A T YRAPE+ + +
Sbjct: 150 AGII--HRDLKPSNVAVNEDSELRILDFGLARQADEEMTGYVATRWYRAPEIMLNWMHYN 207
Query: 494 QKADVYSFGVLLLELLTGKA 513
Q D++S G ++ ELL GKA
Sbjct: 208 QTVDIWSVGCIMAELLQGKA 227
>pdb|3NUN|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) With Lead
Compound
Length = 292
Score = 60.1 bits (144), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 20 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 77
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 78 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 131
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 132 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 189
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 190 EKSACKSSDLWALGCIIYQLVAGLPPFRA 218
>pdb|1UU9|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-3
Length = 286
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 15 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 72
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 73 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 126
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 127 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 184
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 185 EKSACKSSDLWALGCIIYQLVAGLPPFRA 213
>pdb|3KN5|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN5|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
In With Amp-Pnp
pdb|3KN6|A Chain A, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
pdb|3KN6|B Chain B, Crystal Structure Of The C-Terminal Kinase Domain Of Msk1
Length = 325
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 50/205 (24%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRA 379
LG+G+F K + + + KR++ T +KE G H N+V L
Sbjct: 19 LGEGSFSICRKCVHKKSNQAFAVKIISKRMEANT--QKEITALKLCEG---HPNIVKLHE 73
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ + LV + + G L + + T ++ R ++ A++++H G
Sbjct: 74 VFHDQLHTFLVMELLNGGELFERIKKKKHFSETEASYIMRKLVS-----AVSHMHDVGVV 128
Query: 440 NSHGNIKSSNILLSK---SYEARISDFGLAHLASPSSTPNRID----GYRAPEVTDARKV 492
H ++K N+L + + E +I DFG A L P + P + Y APE+ +
Sbjct: 129 --HRDLKPENLLFTDENDNLEIKIIDFGFARLKPPDNQPLKTPCFTLHYAAPELLNQNGY 186
Query: 493 SQKADVYSFGVLLLELLTGKAPTQA 517
+ D++S GV+L +L+G+ P Q+
Sbjct: 187 DESCDLWSLGVILYTMLSGQVPFQS 211
>pdb|3ORX|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|E Chain E, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|F Chain F, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|G Chain G, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORX|H Chain H, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Inhibitor 1f8
pdb|3ORZ|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|B Chain B, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|C Chain C, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3ORZ|D Chain D, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator 2a2
pdb|3OTU|A Chain A, Pdk1 Mutant Bound To Allosteric Disulfide Fragment
Activator Js30
Length = 316
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 43 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 100
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 101 KL-YFCFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 154
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 155 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 212
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 213 EKSACKSSDLWALGCIIYQLVAGLPPFRA 241
>pdb|1H1W|A Chain A, High Resolution Crystal Structure Of The Human Pdk1
Catalytic Domain
pdb|1UVR|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-8
Length = 289
Score = 60.1 bits (144), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 16 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 73
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 74 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 127
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 128 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 185
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 186 EKSACKSSDLWALGCIIYQLVAGLPPFRA 214
>pdb|3RWP|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 95
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 96 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 150 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|4E5A|X Chain X, The W197a Mutant Of P38a Map Kinase
Length = 360
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +A
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNA 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2R7B|A Chain A, Crystal Structure Of The Phosphoinositide-Dependent
Kinase- 1 (Pdk-1)catalytic Domain Bound To A
Dibenzonaphthyridine Inhibitor
pdb|3ION|A Chain A, Pdk1 In Complex With Compound 8h
Length = 312
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 96
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 97 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 150
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 151 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANSFVGTAQYVSPELLT 208
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2XCH|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 93
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 94 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 147
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 148 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|1UU3|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ly333531
pdb|1UU7|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-2
pdb|1UU8|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Bim-1
pdb|1OKY|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Staurosporine
pdb|1OKZ|A Chain A, Structure Of Human Pdk1 Kinase Domain In Complex With
Ucn-01
Length = 310
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 36 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 93
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 94 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 147
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 148 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2XCK|A Chain A, Crystal Structure Of Pdk1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 309
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 36 KILGEGSFSTTVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 93
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 94 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 147
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 148 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 205
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 206 EKSACKSSDLWALGCIIYQLVAGLPPFRA 234
>pdb|2FSO|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 96 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 146
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H A + YRAPE+ +
Sbjct: 147 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3SC1|A Chain A, Novel Isoquinolone Pdk1 Inhibitors Discovered Through
Fragment-Based Lead Discovery
pdb|3RWQ|A Chain A, Discovery Of A Novel, Potent And Selective Inhibitor Of 3-
Phosphoinositide Dependent Kinase (Pdk1)
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 95
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 96 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 150 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3HRC|A Chain A, Crystal Structure Of A Mutant Of Human Pdk1 Kinase Domain
In Complex With Atp
pdb|3HRF|A Chain A, Crystal Structure Of Human Pdk1 Kinase Domain In Complex
With An Allosteric Activator Bound To The Pif-Pocket
pdb|3RCJ|A Chain A, Rapid Preparation Of Triazolyl Substituted Nh-Heterocyclic
Kinase Inhibitors Via One-Pot Sonogashira Coupling
Tms-Deprotection Cuaac Sequence
pdb|4A06|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps114 Bound To The Pif-Pocket
pdb|4AW1|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps210 Bound To The Pif-Pocket
Length = 311
Score = 59.7 bits (143), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 95
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 96 KLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 150 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2FST|X Chain X, Mitogen Activated Protein Kinase P38alpha (d176a+f327l)
Activating Mutant
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 96 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 146
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H A + YRAPE+ +
Sbjct: 147 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2FSL|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-A
pdb|2FSM|X Chain X, Mitogen Activated Protein Kinase P38alpha (D176a+f327s)
Activating Mutant Form-B
Length = 367
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 100/203 (49%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 96 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 146
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H A + YRAPE+ +
Sbjct: 147 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTADEMTGYVATRWYRAPEIMLNW 204
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|2A2A|A Chain A, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|B Chain B, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|C Chain C, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2A2A|D Chain D, High-resolution Crystallographic Analysis Of The
Autoinhibited Conformation Of A Human Death-associated
Protein Kinase
pdb|2CKE|A Chain A, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|B Chain B, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|C Chain C, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
pdb|2CKE|D Chain D, Human Death-Associated Drp-1 Kinase In Complex With
Inhibitor
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G+ A K +K VS +E ++ ++ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L Y +R + +L+ + + G L L A + L+ E + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
+K A H ++K NI LL K+ ++ DFGLAH I G + APE+
Sbjct: 133 TKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1WMK|A Chain A, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|E Chain E, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|C Chain C, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|B Chain B, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|F Chain F, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|D Chain D, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|H Chain H, Human Death-Associated Kinase Drp-1, Mutant S308d D40
pdb|1WMK|G Chain G, Human Death-Associated Kinase Drp-1, Mutant S308d D40
Length = 321
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G+ A K +K VS +E ++ ++ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L Y +R + +L+ + + G L L A + L+ E + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
+K A H ++K NI LL K+ ++ DFGLAH I G + APE+
Sbjct: 133 TKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3QC4|A Chain A, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
pdb|3QC4|B Chain B, Pdk1 In Complex With Dfg-Out Inhibitor Xxx
Length = 314
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 41 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 98
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 99 KLY-FTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 152
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 153 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 210
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 211 EKSACKSSDLWALGCIIYQLVAGLPPFRA 239
>pdb|3H9O|A Chain A, Phosphoinositide-Dependent Protein Kinase 1 (Pdk-1) In
Complex With Compound 9
Length = 311
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 95
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 96 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 150 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 208 EKSACKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|3LL6|A Chain A, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
pdb|3LL6|B Chain B, Crystal Structure Of The Human Cyclin G Associated Kinase
(gak)
Length = 337
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/296 (24%), Positives = 126/296 (42%), Gaps = 55/296 (18%)
Query: 324 VLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD----HENLVPL- 377
VL +G F Y+A + G A+KRL ++ E++ R ++ V M H N+V
Sbjct: 35 VLAEGGFAFVYEAQDVGSGREYALKRL--LSNEEEKNRAIIQEVCFMKKLSGHPNIVQFC 92
Query: 378 RAYYYSRDE------KLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
A ++E + L+ + G L L + R PL+ +T + RA+
Sbjct: 93 SAASIGKEESDTGQAEFLLLTELCKGQLVEFL--KKMESRGPLSCDTVLKIFYQTCRAVQ 150
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFG----LAH------------LASPSSTP 475
++H + P H ++K N+LLS ++ DFG ++H L T
Sbjct: 151 HMHRQKPPIIHRDLKVENLLLSNQGTIKLCDFGSATTISHYPDYSWSAQRRALVEEEITR 210
Query: 476 NRIDGYRAPEVTDARK---VSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQS 532
N YR PE+ D + +K D+++ G +L L + P E+G L
Sbjct: 211 NTTPMYRTPEIIDLYSNFPIGEKQDIWALGCILYLLCFRQHPF-----EDGAKL-----R 260
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+V +++ D + + ++ M+Q+ P+ R S+AEV Q++EI
Sbjct: 261 IVNGKYSIPPHDTQYTVFHSLIRAMLQV----------NPEERLSIAEVVHQLQEI 306
>pdb|1LUF|A Chain A, Crystal Structure Of The Musk Tyrosine Kinase: Insights
Into Receptor Autoregulation
Length = 343
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 67/301 (22%), Positives = 129/301 (42%), Gaps = 57/301 (18%)
Query: 325 LGKGTFGTAYKA------TLEMGIVVAVKRLKDVTVS--EKEFREKMEVVGSMDHENLVP 376
+G+G FG ++A E +VAVK LK+ + + +F+ + ++ D+ N+V
Sbjct: 55 IGEGAFGRVFQARAPGLLPYEPFTMVAVKMLKEEASADMQADFQREAALMAEFDNPNIVK 114
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALL------------HGN-------RGAGRTPLNWE 417
L L+ +YM G L+ L H + G PL+
Sbjct: 115 LLGVCAVGKPMCLLFEYMAYGDLNEFLRSMSPHTVCSLSHSDLSTRARVSSPGPPPLSCA 174
Query: 418 TRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR 477
+ +A + +AYL + H ++ + N L+ ++ +I+DFGL+ S+ +
Sbjct: 175 EQLCIARQVAAGMAYLSER--KFVHRDLATRNCLVGENMVVKIADFGLSRNIY-SADYYK 231
Query: 478 IDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRW 529
DG + PE + + ++DV+++GV+L E+ + G P + +EE + R
Sbjct: 232 ADGNDAIPIRWMPPESIFYNRYTTESDVWAYGVVLWEIFSYGLQPYYGMAHEEVIYYVR- 290
Query: 530 VQSVVKEEWTAEVFDLELLRY-QNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
D +L +N E+ L++L C ++ P +RPS + ++ +
Sbjct: 291 --------------DGNILACPENCPLELYNLMRL---CWSKLPADRPSFCSIHRILQRM 333
Query: 589 C 589
C
Sbjct: 334 C 334
>pdb|3IOP|A Chain A, Pdk-1 In Complex With The Inhibitor Compound-8i
pdb|3QCQ|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-(3-
Amino-1h-Indazol-6-Yl)-N4-Ethyl-2,4-Pyrimidinediamine
pdb|3QCS|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-[2-
Amino-6-(4-Morpholinyl)-4-Pyrimidinyl]-1h-Indazol-3-
Amine
pdb|3QCX|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 6-{2-
Amino-6-[(3r)-3-Methyl-4-Morpholinyl]-4-Pyrimidinyl}-1h-
Indazol-3- Amine
pdb|3QCY|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 4-[2-
Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-N-
Phenyl-2- Morpholinecarboxamide
pdb|3QD0|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With (2r,5s)-
1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-Pyrimidinyl]-6-
Methyl-N- Phenyl-3-Piperidinecarboxamide
pdb|3QD3|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1- Dimethylethyl
{(3r,6s)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-6-Methyl-3-Piperidinyl}carbamate
pdb|3QD4|A Chain A, Phosphoinositide-Dependent Kinase-1 (Pdk1) Kinase Domain
With 1,1-
Dimethylethyl{(3r,
5r)-1-[2-Amino-6-(3-Amino-1h-Indazol-6-Yl)-4-
Pyrimidinyl]-5-Methyl-3-Piperidinyl}carbamate
Length = 312
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 39 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 96
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 97 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 150
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 151 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 208
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 209 EKSACKSSDLWALGCIIYQLVAGLPPFRA 237
>pdb|2OZO|A Chain A, Autoinhibited Intact Human Zap-70
Length = 613
Score = 59.7 bits (143), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/221 (29%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATLEM---GIVVAVKRLKDVT--VSEKEFREKMEVVGSM 369
++LL A E LG G FG+ + M I VA+K LK T +E + +++ +
Sbjct: 335 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 393
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
D+ +V L + + +LV + G L L G R P++ + L S
Sbjct: 394 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPVS--NVAELLHQVSMG 448
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YR 482
+ YL K H N+ + N+LL + A+ISDFGL+ A S R G +
Sbjct: 449 MKYLEEKN--FVHRNLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 506
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
APE + RK S ++DV+S+GV + E L+ G+ P + + E
Sbjct: 507 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 547
>pdb|2X4F|A Chain A, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156.
pdb|2X4F|B Chain B, The Crystal Structure Of The Human Myosin Light Chain
Kinase Loc340156
Length = 373
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 66/254 (25%), Positives = 116/254 (45%), Gaps = 34/254 (13%)
Query: 320 ASAEVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKE-FREKMEVVGSMDHENLVPL 377
+ E+LG G FG +K G+ +A K +K + +KE + ++ V+ +DH NL+ L
Sbjct: 92 SKTEILGGGRFGQVHKCEETATGLKLAAKIIKTRGMKDKEEVKNEISVMNQLDHANLIQL 151
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA-SRAIAYLHSK 436
+ S+++ +LV +Y+ G L +R + E + L + I ++H
Sbjct: 152 YDAFESKNDIVLVMEYVDGGELF-----DRIIDESYNLTELDTILFMKQICEGIRHMHQM 206
Query: 437 GPANSHGNIKSSNILL--SKSYEARISDFGLAHLASPSS-------TPNRIDGYRAPEVT 487
H ++K NIL + + +I DFGLA P TP + APEV
Sbjct: 207 YIL--HLDLKPENILCVNRDAKQIKIIDFGLARRYKPREKLKVNFGTPE----FLAPEVV 260
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLEL 547
+ VS D++S GV+ LL+G +P + E ++ +++ W DLE
Sbjct: 261 NYDFVSFPTDMWSVGVIAYMLLSGLSPFLGDNDAETLN------NILACRW-----DLED 309
Query: 548 LRYQNVEEEMVQLL 561
+Q++ EE + +
Sbjct: 310 EEFQDISEEAKEFI 323
>pdb|2A27|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|D Chain D, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|E Chain E, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|F Chain F, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|G Chain G, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
pdb|2A27|H Chain H, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 8 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G+ A K +K VS +E ++ ++ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L Y +R + +L+ + + G L L A + L+ E + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
+K A H ++K NI LL K+ ++ DFGLAH I G + APE+
Sbjct: 133 TKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|3EYG|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
pdb|3EYH|A Chain A, Crystal Structures Of Jak1 And Jak2 Inhibitor Complexes
Length = 290
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSEK--EFREKMEVVGSMDHENLVPL 377
LG+G FG + G VAVK LK + + ++++E++ ++ HEN+V
Sbjct: 17 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 76
Query: 378 RAYYYSR--DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + L+ +++P GSL L N+ +N + + A+ + + YL S
Sbjct: 77 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGMDYLGS 132
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVTD 488
+ H ++ + N+L+ ++ +I DFGL + R APE
Sbjct: 133 R--QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 190
Query: 489 ARKVSQKADVYSFGVLLLELLT 510
K +DV+SFGV L ELLT
Sbjct: 191 QSKFYIASDVWSFGVTLHELLT 212
>pdb|4E4L|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|E Chain E, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4L|D Chain D, Jak1 Kinase (Jh1 Domain) In Complex With Compound 30
pdb|4E4N|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E4N|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 49
pdb|4E5W|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4E5W|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 26
pdb|4EHZ|A Chain A, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|B Chain B, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|C Chain C, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EHZ|D Chain D, The Jak1 Kinase Domain In Complex With Inhibitor
pdb|4EI4|A Chain A, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4EI4|B Chain B, Jak1 Kinase (jh1 Domain) In Complex With Compound 20
pdb|4FK6|A Chain A, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
pdb|4FK6|B Chain B, Jak1 Kinase (Jh1 Domain) In Complex With Compound 72
Length = 302
Score = 59.3 bits (142), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/202 (26%), Positives = 91/202 (45%), Gaps = 22/202 (10%)
Query: 325 LGKGTFGTAYKATLE-----MGIVVAVKRLKDVTVSEK--EFREKMEVVGSMDHENLVPL 377
LG+G FG + G VAVK LK + + ++++E++ ++ HEN+V
Sbjct: 29 LGEGHFGKVELCRYDPEGDNTGEQVAVKSLKPESGGNHIADLKKEIEILRNLYHENIVKY 88
Query: 378 RAYYYSR--DEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + L+ +++P GSL L N+ +N + + A+ + + YL S
Sbjct: 89 KGICTEDGGNGIKLIMEFLPSGSLKEYLPKNKNK----INLKQQLKYAVQICKGMDYLGS 144
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------APEVTD 488
+ H ++ + N+L+ ++ +I DFGL + R APE
Sbjct: 145 R--QYVHRDLAARNVLVESEHQVKIGDFGLTKAIETDKEXXTVKDDRDSPVFWYAPECLM 202
Query: 489 ARKVSQKADVYSFGVLLLELLT 510
K +DV+SFGV L ELLT
Sbjct: 203 QSKFYIASDVWSFGVTLHELLT 224
>pdb|2J0K|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains.
pdb|2J0K|B Chain B, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 50/283 (17%)
Query: 325 LGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVPL 377
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVKL 456
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 457 IGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKR 511
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKV 492
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 512 FV--HRDIAARNVLVSATDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 493 SQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQ 551
+ +DV+ FGV + E+L G P Q + N + + R +
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RIE 606
Query: 552 NVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
N E + L L C A P RP E+ +Q+ I
Sbjct: 607 NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|4A07|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Activator Ps171 Bound To The Pif-Pocket
pdb|4AW0|A Chain A, Human Pdk1 Kinase Domain In Complex With Allosteric
Compound Ps182 Bound To The Pif-Pocket
Length = 311
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 98/209 (46%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAYKA-----TLEMGIVVAVKR--LKDVTVSEKEFREKMEVVGSMDHENLV 375
++LG+G+F T A + E I + KR +K+ V RE+ +V+ +DH V
Sbjct: 38 KILGEGSFSTVVLARELATSREYAIKILEKRHIIKENKVPYVT-RER-DVMSRLDHPFFV 95
Query: 376 PLRAYYYSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
L + + DEKL Y G L + T + T ++ A+ YLH
Sbjct: 96 KL-YFTFQDDEKLYFGLSYAKNGELLKYIRKIGSFDETCTRFYTAEIVS-----ALEYLH 149
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTD 488
KG H ++K NILL++ +I+DFG A + SP S R + Y +PE+
Sbjct: 150 GKGII--HRDLKPENILLNEDMHIQITDFGTAKVLSPESKQARANXFVGTAQYVSPELLT 207
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + +D+++ G ++ +L+ G P +A
Sbjct: 208 EKSAXKSSDLWALGCIIYQLVAGLPPFRA 236
>pdb|2PZP|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
pdb|2PZP|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic K526e Mutation Responsible For
Crouzon Syndrome
Length = 324
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 71/301 (23%), Positives = 121/301 (40%), Gaps = 64/301 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEK-----EFREKMEVVGSMDH 371
LG+G FG A + + VAVK LKD E E M+++G H
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKDDATEEDLSDLVSEMEMMKMIGK--H 100
Query: 372 ENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETRS 420
+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 101 KNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDLV 160
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG 480
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 161 SCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNIDY 212
Query: 481 YR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLP 527
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 213 YKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKLL 272
Query: 528 RWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 273 KEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDR 315
Query: 588 I 588
I
Sbjct: 316 I 316
>pdb|3ZGW|A Chain A, Crystal Structure Of Maternal Embryonic Leucine Zipper
Kinase (melk) In Complex With Amp-pnp
Length = 347
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 113/242 (46%), Gaps = 36/242 (14%)
Query: 313 DLEDLLRASA--EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEK--EFREKMEVVG 367
D ++LL+ E +G G F A + G +VA+K + T+ + ++E +
Sbjct: 4 DYDELLKYYELHETIGTGGFAKVKLACHILTGEMVAIKIMDKNTLGSDLPRIKTEIEALK 63
Query: 368 SMDHENLVPLRAYYYSRDEKLLVHDYMPMGSL-SALLHGNRGAGRTPLNWETRSGLALGA 426
++ H+++ L + ++ +V +Y P G L ++ +R + ETR
Sbjct: 64 NLRHQHICQLYHVLETANKIFMVLEYCPGGELFDYIISQDRLSEE-----ETRVVFRQIV 118
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA---------HLASPSSTPNR 477
S A+AY+HS+G A H ++K N+L + ++ ++ DFGL HL + +
Sbjct: 119 S-AVAYVHSQGYA--HRDLKPENLLFDEYHKLKLIDFGLCAKPKGNKDYHLQTCCGSL-- 173
Query: 478 IDGYRAPEVTDARK-VSQKADVYSFGVLLLELLTGKAP-----TQALLNE---EGVDLPR 528
Y APE+ + + +ADV+S G+LL L+ G P AL + D+P+
Sbjct: 174 --AYAAPELIQGKSYLGSEADVWSMGILLYVLMCGFLPFDDDNVMALYKKIMRGKYDVPK 231
Query: 529 WV 530
W+
Sbjct: 232 WL 233
>pdb|1Z9X|A Chain A, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|B Chain B, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
pdb|1Z9X|C Chain C, Human Drp-1 Kinase, W305s S308a D40 Mutant, Crystal Form
With 3 Monomers In The Asymmetric Unit
Length = 321
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G+ A K +K VS +E ++ ++ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L Y +R + +L+ + + G L L A + L+ E + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
+K A H ++K NI LL K+ ++ DFGLAH I G + APE+
Sbjct: 133 TKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1U59|A Chain A, Crystal Structure Of The Zap-70 Kinase Domain In Complex
With Staurosporine
Length = 287
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 65/221 (29%), Positives = 104/221 (47%), Gaps = 21/221 (9%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATLEM---GIVVAVKRLKDVT--VSEKEFREKMEVVGSM 369
++LL A E LG G FG+ + M I VA+K LK T +E + +++ +
Sbjct: 9 DNLLIADIE-LGCGNFGSVRQGVYRMRKKQIDVAIKVLKQGTEKADTEEMMREAQIMHQL 67
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
D+ +V L + + +LV + G L L G R P++ + L S
Sbjct: 68 DNPYIVRLIGVCQA-EALMLVMEMAGGGPLHKFLVGKRE--EIPVS--NVAELLHQVSMG 122
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YR 482
+ YL K H ++ + N+LL + A+ISDFGL+ A S R G +
Sbjct: 123 MKYLEEKNFV--HRDLAARNVLLVNRHYAKISDFGLSKALGADDSYYTARSAGKWPLKWY 180
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
APE + RK S ++DV+S+GV + E L+ G+ P + + E
Sbjct: 181 APECINFRKFSSRSDVWSYGVTMWEALSYGQKPYKKMKGPE 221
>pdb|2XIK|A Chain A, Structure Of Human Ysk1 (Yeast Sps1-Ste20-Related Kinase
1)
Length = 294
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 100/222 (45%), Gaps = 18/222 (8%)
Query: 305 FGKGDRAFDLEDLLRASAEVLGKGTFGTAYKA----TLEMGIVVAVKRLKDVTVSEKEFR 360
F D E+L + +GKG+FG YK T E+ + + + L++ ++ +
Sbjct: 8 FANQHSRVDPEELF-TKLDRIGKGSFGEVYKGIDNHTKEV-VAIKIIDLEEAEDEIEDIQ 65
Query: 361 EKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRS 420
+++ V+ D + Y + ++ +Y+ GS LL PL +
Sbjct: 66 QEITVLSQCDSPYITRYFGSYLKSTKLWIIMEYLGGGSALDLLKPG------PLEETYIA 119
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRID 479
+ + + YLHS+ H +IK++N+LLS+ + +++DFG+A L N
Sbjct: 120 TILREILKGLDYLHSE--RKIHRDIKAANVLLSEQGDVKLADFGVAGQLTDTQIKRNXFV 177
Query: 480 G---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQAL 518
G + APEV KAD++S G+ +EL G+ P L
Sbjct: 178 GTPFWMAPEVIKQSAYDFKADIWSLGITAIELAKGEPPNSDL 219
>pdb|2J0J|A Chain A, Crystal Structure Of A Fragment Of Focal Adhesion Kinase
Containing The Ferm And Kinase Domains
Length = 656
Score = 59.3 bits (142), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 69/283 (24%), Positives = 117/283 (41%), Gaps = 50/283 (17%)
Query: 325 LGKGTFGTA----YKATLEMGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVPL 377
+G+G FG Y + + VA+K K+ T V EK +E + + DH ++V L
Sbjct: 398 IGEGQFGDVHQGIYMSPENPAMAVAIKTCKNCTSDSVREKFLQEAL-TMRQFDHPHIVKL 456
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ + ++ + +G L + L + + L+ + A S A+AYL SK
Sbjct: 457 IGVI-TENPVWIIMELCTLGELRSFLQVRKFS----LDLASLILYAYQLSTALAYLESKR 511
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-----YRAPEVTDARKV 492
H +I + N+L+S + ++ DFGL+ S+ G + APE + R+
Sbjct: 512 FV--HRDIAARNVLVSSNDCVKLGDFGLSRYMEDSTYYKASKGKLPIKWMAPESINFRRF 569
Query: 493 SQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQ 551
+ +DV+ FGV + E+L G P Q + N + + R +
Sbjct: 570 TSASDVWMFGVCMWEILMHGVKPFQGVKNNDVIG-----------------------RIE 606
Query: 552 NVEEEMV------QLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
N E + L L C A P RP E+ +Q+ I
Sbjct: 607 NGERLPMPPNCPPTLYSLMTKCWAYDPSRRPRFTELKAQLSTI 649
>pdb|3SLS|A Chain A, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
pdb|3SLS|B Chain B, Crystal Structure Of Human Mek-1 Kinase In Complex With
Ucb1353770 And Amppnp
Length = 304
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 304 FFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFR 360
F + + +L+D LG G G +K + + +V ++L + + +
Sbjct: 12 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII 71
Query: 361 EKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRS 420
+++V+ + +V +YS E + ++M GSL +L + AGR P +
Sbjct: 72 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILG 126
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRI 478
+++ + + YL K H ++K SNIL++ E ++ DFG++ + S +++
Sbjct: 127 KVSIAVIKGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 185
Query: 479 DGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y +PE S ++D++S G+ L+E+ G+ P
Sbjct: 186 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 221
>pdb|3PLS|A Chain A, Ron In Complex With Ligand Amp-Pnp
Length = 298
Score = 59.3 bits (142), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 60/215 (27%), Positives = 97/215 (45%), Gaps = 21/215 (9%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL----EMGIVVAVK---RLKDVTVSEKEFREKMEVVG 367
E ++ S V+GKG FG Y + I A+K R+ ++ E RE + + G
Sbjct: 19 ERVVTHSDRVIGKGHFGVVYHGEYIDQAQNRIQCAIKSLSRITEMQQVEAFLREGLLMRG 78
Query: 368 SMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS 427
++H N++ L + L H +P LL R R P + S L +
Sbjct: 79 -LNHPNVLALIGIMLPPEG--LPHVLLPYMCHGDLLQFIRSPQRNPTVKDLIS-FGLQVA 134
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-------HLASPSSTPNRID- 479
R + YL + H ++ + N +L +S+ +++DFGLA + + R+
Sbjct: 135 RGMEYLAEQ--KFVHRDLAARNCMLDESFTVKVADFGLARDILDREYYSVQQHRHARLPV 192
Query: 480 GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ A E + + K+DV+SFGVLL ELLT AP
Sbjct: 193 KWTALESLQTYRFTTKSDVWSFGVLLWELLTRGAP 227
>pdb|1ZWS|A Chain A, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|B Chain B, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|C Chain C, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|D Chain D, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|E Chain E, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|F Chain F, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|G Chain G, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
pdb|1ZWS|H Chain H, Crystal Structure Of The Catalytic Domain Of Human Drp-1
Kinase
Length = 288
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 94/207 (45%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G+ A K +K VS +E ++ ++ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVSREEIEREVSILRQVLHHNV 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L Y +R + +L+ + + G L L A + L+ E + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
+K A H ++K NI LL K+ ++ DFGLAH I G + APE+
Sbjct: 133 TKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|2PVF|A Chain A, Crystal Structure Of Tyrosine Phosphorylated Activated Fgf
Receptor 2 (Fgfr2) Kinase Domain In Complex With Atp
Analog And Substrate Peptide
Length = 334
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 54/296 (18%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEXSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS-----PSST 474
+R + YL S+ H ++ + N+L++++ +I+DFGLA + +T
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 475 PNRID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
R+ + APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL------ 271
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 272 -LKEGHRMD-------KPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2PY3|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
pdb|2PY3|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565g Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ Y G+L L R G R P + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVGYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNID 211
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 272 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 314
Query: 587 EI 588
I
Sbjct: 315 RI 316
>pdb|2Q0B|A Chain A, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
pdb|2Q0B|B Chain B, Crystal Strucure Of Fgf Receptor 2 (Fgfr2) Kinase Domain
Harboring The Pathogenic E565a Mutation Responsible For
Pfeiffer Syndrome
Length = 324
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 123/302 (40%), Gaps = 66/302 (21%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ Y G+L L R G R P + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVAYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID 479
+R + YL S+ H ++ + N+L++++ +I+DFGLA N ID
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLAR------DINNID 211
Query: 480 GYR------------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDL 526
Y+ APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 212 YYKKTTNGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL 271
Query: 527 PRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIE 586
+ + K N E+ +++ +C P RP+ ++ ++
Sbjct: 272 LKEGHRMDKP--------------ANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLD 314
Query: 587 EI 588
I
Sbjct: 315 RI 316
>pdb|3CLY|A Chain A, Crystal Structure Of Fgf Receptor 2 (Fgfr2) Kinase Domains
Trapped In Trans-Phosphorylation Reaction
Length = 334
Score = 58.9 bits (141), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 71/296 (23%), Positives = 127/296 (42%), Gaps = 54/296 (18%)
Query: 325 LGKGTFGTAYKATL--------EMGIVVAVKRLKDVTVSEKEFR------EKMEVVGSMD 370
LG+G FG A + + VAVK LKD +EK+ E M+++G
Sbjct: 43 LGEGAFGQVVMAEAVGIDKDKPKEAVTVAVKMLKD-DATEKDLSDLVSEMEMMKMIGK-- 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG--------RTP---LNWETR 419
H+N++ L ++ +Y G+L L R G R P + ++
Sbjct: 100 HKNIINLLGACTQDGPLYVIVEYASKGNLREYLRARRPPGMEYSYDINRVPEEQMTFKDL 159
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS-----PSST 474
+R + YL S+ H ++ + N+L++++ +I+DFGLA + +T
Sbjct: 160 VSCTYQLARGMEYLASQ--KCIHRDLAARNVLVTENNVMKIADFGLARDINNIDXXKKTT 217
Query: 475 PNRID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
R+ + APE R + ++DV+SFGVL+ E+ T G +P + EE L
Sbjct: 218 NGRLPVKWMAPEALFDRVYTHQSDVWSFGVLMWEIFTLGGSPYPGIPVEELFKL------ 271
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 272 -LKEGHRMD-------KPANCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 316
>pdb|2AC5|A Chain A, Structure Of Human Mnk2 Kinase Domain Mutant D228g
pdb|2HW7|A Chain A, Crystal Structure Of Mnk2-D228g In Complex With
Staurosporine
Length = 316
Score = 58.5 bits (140), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 29/223 (13%)
Query: 314 LEDLLRASAEVLGKGTFG---TAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
ED+ + +VLG+G T V + + + + FRE +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
H N++ L ++ D LV + M GS+ + +H R N S + + A+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDVASAL 124
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYE---ARISDFGLAH------LASPSSTPNRIDG- 480
+LH+KG A H ++K NIL + +I DFGL SP STP +
Sbjct: 125 DFLHNKGIA--HRDLKPENILCEHPNQVSPVKICDFGLGSGIKLNGDCSPISTPELLTPC 182
Query: 481 ----YRAPEVTDARK-----VSQKADVYSFGVLLLELLTGKAP 514
Y APEV +A ++ D++S GV+L LL+G P
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3EQC|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With
Compound 1, Atp-Gs And Mg2p
pdb|3EQD|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Atp-Gs
And Mg2p
pdb|3EQF|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With K252a
And Mg2p
pdb|3EQG|A Chain A, X-ray Structure Of The Human Mitogen-activated Protein
Kinase Kinase 1 (mek1) In A Ternary Complex With Pd, Adp
And Mg2p
pdb|3EQH|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Ternary Complex With U0126,
Adp And Mg2p
pdb|3EQI|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Binary Complex With Adp And
Mg2p
Length = 360
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 304 FFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFR 360
F + + +L+D LG G G +K + + +V ++L + + +
Sbjct: 20 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII 79
Query: 361 EKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRS 420
+++V+ + +V +YS E + ++M GSL +L + AGR P +
Sbjct: 80 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILG 134
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRI 478
+++ + + YL K H ++K SNIL++ E ++ DFG++ + S +++
Sbjct: 135 KVSIAVIKGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 193
Query: 479 DGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y +PE S ++D++S G+ L+E+ G+ P
Sbjct: 194 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 229
>pdb|4AN2|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN3|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4AN9|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs.
pdb|4ANB|A Chain A, Crystal Structures Of Human Mek1 With Carboxamide-Based
Allosteric Inhibitor Xl518 (Gdc-0973), Or Related
Analogs
Length = 301
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/234 (23%), Positives = 106/234 (45%), Gaps = 16/234 (6%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFREKMEVVGSMDHENLVPLRAYY 381
LG G G +K + + +V ++L + + + +++V+ + +V +
Sbjct: 17 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 76
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
YS E + ++M GSL +L + AGR P + +++ + + YL K
Sbjct: 77 YSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILGKVSIAVIKGLTYLREKHKI-M 130
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVSQKADV 498
H ++K SNIL++ E ++ DFG++ N G Y +PE S ++D+
Sbjct: 131 HRDVKPSNILVNSRGEIKLCDFGVSGQLI-DEMANEFVGTRSYMSPERLQGTHYSVQSDI 189
Query: 499 YSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQN 552
+S G+ L+E+ G+ P + E +D ++ + + + VF LE + N
Sbjct: 190 WSMGLSLVEMAVGRYPRPPMAIFELLD---YIVNEPPPKLPSAVFSLEFQDFVN 240
>pdb|3UIU|A Chain A, Crystal Structure Of Apo-Pkr Kinase Domain
pdb|3UIU|B Chain B, Crystal Structure Of Apo-Pkr Kinase Domain
Length = 306
Score = 58.5 bits (140), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 94/217 (43%), Gaps = 35/217 (16%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E++G G FG +KA + G ++R+K +EK RE ++ + +DH N+V +
Sbjct: 18 ELIGSGGFGQVFKAKHRIDGKTYVIRRVK--YNNEKAERE-VKALAKLDHVNIVHYNGCW 74
Query: 382 -------YSRDEKLLVHDYMPMGSLSA--------LLHGNRGAGRTPLNW-ETRSGLALG 425
+ D+ L DY P S ++ + T W E R G L
Sbjct: 75 DGFDYDPETSDDSLESSDYDPENSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGEKLD 134
Query: 426 A----------SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP 475
++ + Y+HSK H ++K SNI L + + +I DFGL
Sbjct: 135 KVLALELFEQITKGVDYIHSKKLI--HRDLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKR 192
Query: 476 NRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELL 509
R G Y +PE ++ ++ D+Y+ G++L ELL
Sbjct: 193 TRSKGTLRYMSPEQISSQDYGKEVDLYALGLILAELL 229
>pdb|3D83|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
pdb|3IPH|A Chain A, Crystal Structure Of P38 In Complex With A Biphenylamide
Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
P R+ D L+ H MG+ N L + L R + Y
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGA-----DLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DAR 490
+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 141 IHSADII--HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 491 KVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|3MBL|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgadp
pdb|3PP1|A Chain A, Crystal Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek 1) In Complex With Ligand And Mgatp
Length = 328
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFREKMEVVGSMDHENLVPLRAYY 381
LG G G +K + + +V ++L + + + +++V+ + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
YS E + ++M GSL +L + AGR P + +++ + + YL K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILGKVSIAVIKGLTYLREKHKI-M 127
Query: 442 HGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRIDGYRAPEVTDARKVSQKADVY 499
H ++K SNIL++ E ++ DFG++ + S +++ Y +PE S ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 500 SFGVLLLELLTGKAPT 515
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3DV3|A Chain A, Mek1 With Pf-04622664 Bound
Length = 322
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 46/196 (23%), Positives = 94/196 (47%), Gaps = 11/196 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFREKMEVVGSMDHENLVPLRAYY 381
LG G G +K + + +V ++L + + + +++V+ + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
YS E + ++M GSL +L + AGR P + +++ + + YL K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILGKVSIAVIKGLTYLREKHKI-M 127
Query: 442 HGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRIDGYRAPEVTDARKVSQKADVY 499
H ++K SNIL++ E ++ DFG++ + S +++ Y +PE S ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 500 SFGVLLLELLTGKAPT 515
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYPI 203
>pdb|3NNX|A Chain A, Crystal Structure Of Phosphorylated P38 Alpha In Complex
With Dp802
Length = 354
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGXVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2A19|B Chain B, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A19|C Chain C, Pkr Kinase Domain- Eif2alpha- Amp-Pnp Complex.
pdb|2A1A|B Chain B, Pkr Kinase Domain-Eif2alpha Complex
Length = 284
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 28/207 (13%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
E++G G FG +KA + G +KR+K +EK RE ++ + +DH N+V +
Sbjct: 17 ELIGSGGFGQVFKAKHRIDGKTYVIKRVK--YNNEKAERE-VKALAKLDHVNIVHYNGCW 73
Query: 382 ---------------YSRDEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG 425
S+ + L + ++ G+L + RG L+ L
Sbjct: 74 DGFDYDPETSSKNSSRSKTKCLFIQMEFCDKGTLEQWIEKRRGE---KLDKVLALELFEQ 130
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YR 482
++ + Y+HSK N ++K SNI L + + +I DFGL R G Y
Sbjct: 131 ITKGVDYIHSKKLINR--DLKPSNIFLVDTKQVKIGDFGLVTSLKNDGKRXRSKGTLRYM 188
Query: 483 APEVTDARKVSQKADVYSFGVLLLELL 509
+PE ++ ++ D+Y+ G++L ELL
Sbjct: 189 SPEQISSQDYGKEVDLYALGLILAELL 215
>pdb|3IS5|A Chain A, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|B Chain B, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|C Chain C, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|D Chain D, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|E Chain E, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
pdb|3IS5|F Chain F, Crystal Structure Of Cdpk Kinase Domain From Toxoplasma
Gondii, Tgme49_018720
Length = 285
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 65/225 (28%), Positives = 95/225 (42%), Gaps = 24/225 (10%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEVLGKGTFGTAY-----KATLEMGIVVAVKRLKDVTVS 355
NL F G D F + LG G FG + + LE I K V +
Sbjct: 13 NLYFQGTIDDLFIFK-------RKLGSGAFGDVHLVEERSSGLERVIKTINKDRSQVPME 65
Query: 356 EKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLN 415
+ E ++EV+ S+DH N++ + + +V + G L + + G+ L+
Sbjct: 66 QIE--AEIEVLKSLDHPNIIKIFEVFEDYHNMYIVMETCEGGELLERIVSAQARGKA-LS 122
Query: 416 WETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILL---SKSYEARISDFGLAHLASPS 472
+ L A+AY HS+ H ++K NIL S +I DFGLA L
Sbjct: 123 EGYVAELMKQMMNALAYFHSQHVV--HKDLKPENILFQDTSPHSPIKIIDFGLAELFKSD 180
Query: 473 STPNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
G Y APEV R V+ K D++S GV++ LLTG P
Sbjct: 181 EHSTNAAGTALYMAPEVF-KRDVTFKCDIWSAGVVMYFLLTGCLP 224
>pdb|2WQM|A Chain A, Structure Of Apo Human Nek7
pdb|2WQN|A Chain A, Structure Of Adp-Bound Human Nek7
Length = 310
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/282 (21%), Positives = 127/282 (45%), Gaps = 29/282 (10%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFR----EKMEVVGSMDHENLVPLRA 379
+G+G F Y+A + G+ VA+K+++ + + + R ++++++ ++H N++ A
Sbjct: 40 IGRGQFSEVYRAACLLDGVPVALKKVQIFDLMDAKARADCIKEIDLLKQLNHPNVIKYYA 99
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ +E +V + G LS ++ + R + T + A+ ++HS+
Sbjct: 100 SFIEDNELNIVLELADAGDLSRMIKHFKKQKRL-IPERTVWKYFVQLCSALEHMHSR--R 156
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR----IDGYRAPEVTDARKVSQK 495
H +IK +N+ ++ + ++ D GL S +T Y +PE + K
Sbjct: 157 VMHRDIKPANVFITATGVVKLGDLGLGRFFSSKTTAAHSLVGTPYYMSPERIHENGYNFK 216
Query: 496 ADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEE 555
+D++S G LL E+ ++P + ++L + + E D L + E
Sbjct: 217 SDIWSLGCLLYEMAALQSPFYG----DKMNLYSLCKKI-------EQCDYPPLPSDHYSE 265
Query: 556 EMVQLLQLAINCTAQYPDNRPSMA---EVTSQIEEICRSSLQ 594
E+ QL+ + IN P+ RP + +V ++ SSL+
Sbjct: 266 ELRQLVNMCINPD---PEKRPDVTYVYDVAKRMHACTASSLE 304
>pdb|4FG7|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-293 In Complex With Atp
Length = 293
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 98/239 (41%), Gaps = 27/239 (11%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE--FREKMEVV 366
+A D+ D+ +VLG G F A + +VA+K + + KE ++ V+
Sbjct: 12 QAEDIRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 367 GSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
+ H N+V L Y S H Y+ M +S +R + S L
Sbjct: 71 HKIKHPNIVALDDIYESGG-----HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 427 SRAIAYLHSKGPANSHGNIKSSNIL---LSKSYEARISDFGLAHLASPSS---TPNRIDG 480
A+ YLH G H ++K N+L L + + ISDFGL+ + P S T G
Sbjct: 126 LDAVKYLHDLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
Y APEV + S+ D +S GV+ LL G P Q L E D P W
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|3D7Z|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biphenyl
Amide Inhibitor
Length = 360
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
P R+ D L+ H MG+ N L + L R + Y
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGA-----DLNNIVKXQKLTDDHVQFLIYQILRGLKY 140
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DAR 490
+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 141 IHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 491 KVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAQ|A Chain A, P38alpha Bound To Ro3201195
Length = 365
Score = 58.2 bits (139), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 35 IGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 94 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 145 YIHSADII--HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGRT 226
>pdb|4AGU|A Chain A, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|B Chain B, Crystal Structure Of The Human Cdkl1 Kinase Domain
pdb|4AGU|C Chain C, Crystal Structure Of The Human Cdkl1 Kinase Domain
Length = 311
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 90/199 (45%), Gaps = 22/199 (11%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL---KDVTVSEKEFREKMEVVGSMDHENLVPLRAY 380
+G+G++G +K + G +VA+K+ +D V +K ++ ++ + H NLV L
Sbjct: 11 IGEGSYGVVFKCRNRDTGQIVAIKKFLESEDDPVIKKIALREIRMLKQLKHPNLVNLLEV 70
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGR---TPLNWETRSGLALGASRAIAYLHSKG 437
+ + LV +Y L L RG + W+T +A+ + H
Sbjct: 71 FRRKRRLHLVFEYCDHTVLHELDRYQRGVPEHLVKSITWQT--------LQAVNFCHKHN 122
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLAS-PSSTPNR---IDGYRAPE-VTDARKV 492
H ++K NIL++K ++ DFG A L + PS + YR+PE + +
Sbjct: 123 CI--HRDVKPENILITKHSVIKLCDFGFARLLTGPSDYYDDEVATRWYRSPELLVGDTQY 180
Query: 493 SQKADVYSFGVLLLELLTG 511
DV++ G + ELL+G
Sbjct: 181 GPPVDVWAIGCVFAELLSG 199
>pdb|1S9J|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3DY7|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3E8N|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) Complexed With A Potent Inhibitor
Rdea119 And Mgatp
pdb|3V01|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions.
pdb|3V04|A Chain A, Discovery Of Novel Allosteric Mek Inhibitors Possessing
Classical And Non-Classical Bidentate Ser212
Interactions
Length = 341
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFREKMEVVGSMDHENLVPLRAYY 381
LG G G +K + + +V ++L + + + +++V+ + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
YS E + ++M GSL +L + AGR P + +++ + + YL K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILGKVSIAVIKGLTYLREKHKI-M 127
Query: 442 HGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRIDGYRAPEVTDARKVSQKADVY 499
H ++K SNIL++ E ++ DFG++ + S +++ Y +PE S ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 500 SFGVLLLELLTGKAP 514
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|2P55|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
pdb|3EQB|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 1 (Mek1) In A Complex With Ligand And
Mgatp
Length = 333
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFREKMEVVGSMDHENLVPLRAYY 381
LG G G +K + + +V ++L + + + +++V+ + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
YS E + ++M GSL +L + AGR P + +++ + + YL K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILGKVSIAVIKGLTYLREKHKI-M 127
Query: 442 HGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRIDGYRAPEVTDARKVSQKADVY 499
H ++K SNIL++ E ++ DFG++ + S +++ Y +PE S ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 500 SFGVLLLELLTGKAP 514
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|2JC6|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
pdb|2JC6|C Chain C, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase 1d
Length = 334
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/226 (29%), Positives = 94/226 (41%), Gaps = 26/226 (11%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE--FREKMEVVGSMDHENLVPLRA 379
E LG G F A + G + AVK + + KE ++ V+ + HEN+V L
Sbjct: 28 ETLGTGAFSEVVLAEEKATGKLFAVKCIPKKALKGKESSIENEIAVLRKIKHENIVALED 87
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
Y S + LV + G L +R + + S L A+ YLH G
Sbjct: 88 IYESPNHLYLVMQLVSGGELF-----DRIVEKGFYTEKDASTLIRQVLDAVYYLHRMGIV 142
Query: 440 NSHGNIKSSNILL-SKSYEARI--SDFGLAHLASPS---STPNRIDGYRAPEVTDARKVS 493
H ++K N+L S+ E++I SDFGL+ + ST GY APEV + S
Sbjct: 143 --HRDLKPENLLYYSQDEESKIMISDFGLSKMEGKGDVMSTACGTPGYVAPEVLAQKPYS 200
Query: 494 QKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
+ D +S GV+ LL G P Q L E D P W
Sbjct: 201 KAVDCWSIGVIAYILLCGYPPFYDENDSKLFEQILKAEYEFDSPYW 246
>pdb|4EQM|A Chain A, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|B Chain B, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|C Chain C, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|D Chain D, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|E Chain E, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
pdb|4EQM|F Chain F, Structural Analysis Of Staphylococcus Aureus
SerineTHREONINE KINASE Pknb
Length = 294
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 59/205 (28%), Positives = 91/205 (44%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKA--TLEMGIVVAVK------RLKDVTVSEKEFREKMEVVGSMDHENLVP 376
LG G T Y A T+ + I VA+K R K+ T+ K F ++ + H+N+V
Sbjct: 19 LGGGGMSTVYLAEDTI-LNIKVAIKAIFIPPREKEETL--KRFEREVHNSSQLSHQNIVS 75
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ D LV +Y+ +LS + HG PL+ +T I + H
Sbjct: 76 MIDVDEEDDCYYLVMEYIEGPTLSEYIESHG-------PLSVDTAINFTNQILDGIKHAH 128
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS--TPNRIDG---YRAPEVTDA 489
H +IK NIL+ + +I DFG+A S +S N + G Y +PE
Sbjct: 129 DMRIV--HRDIKPQNILIDSNKTLKIFDFGIAKALSETSLTQTNHVLGTVQYFSPEQAKG 186
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
+ D+YS G++L E+L G+ P
Sbjct: 187 EATDECTDIYSIGIVLYEMLVGEPP 211
>pdb|4FG8|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
pdb|4FG8|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-315 In Complex With Atp
Length = 315
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 98/239 (41%), Gaps = 27/239 (11%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE--FREKMEVV 366
+A D+ D+ +VLG G F A + +VA+K + + KE ++ V+
Sbjct: 12 QAEDIRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 367 GSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
+ H N+V L Y S H Y+ M +S +R + S L
Sbjct: 71 HKIKHPNIVALDDIYESGG-----HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 427 SRAIAYLHSKGPANSHGNIKSSNIL---LSKSYEARISDFGLAHLASPSS---TPNRIDG 480
A+ YLH G H ++K N+L L + + ISDFGL+ + P S T G
Sbjct: 126 LDAVKYLHDLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
Y APEV + S+ D +S GV+ LL G P Q L E D P W
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|2JAM|A Chain A, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
pdb|2JAM|B Chain B, Crystal Structure Of Human Calmodulin-Dependent Protein
Kinase I G
Length = 304
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 14/199 (7%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDV-TVSEKEFREKMEVVGSMDHENLVPLRAY 380
EVLG G F + + G + A+K +K + ++ V+ + HEN+V L
Sbjct: 15 EVLGSGAFSEVFLVKQRLTGKLFALKCIKKSPAFRDSSLENEIAVLKKIKHENIVTLEDI 74
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
Y S H Y+ M +S +R R + S + A+ YLH G
Sbjct: 75 YEST-----THYYLVMQLVSGGELFDRILERGVYTEKDASLVIQQVLSAVKYLHENGIV- 128
Query: 441 SHGNIKSSNILL---SKSYEARISDFGLAHLASPS--STPNRIDGYRAPEVTDARKVSQK 495
H ++K N+L ++ + I+DFGL+ + ST GY APEV + S+
Sbjct: 129 -HRDLKPENLLYLTPEENSKIMITDFGLSKMEQNGIMSTACGTPGYVAPEVLAQKPYSKA 187
Query: 496 ADVYSFGVLLLELLTGKAP 514
D +S GV+ LL G P
Sbjct: 188 VDCWSIGVITYILLCGYPP 206
>pdb|3ODY|X Chain X, Crystal Structure Of P38alpha Y323q Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4FG9|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FG9|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I 1-320 In Complex With Atp
pdb|4FGB|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase I Apo Form
Length = 320
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/239 (28%), Positives = 98/239 (41%), Gaps = 27/239 (11%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE--FREKMEVV 366
+A D+ D+ +VLG G F A + +VA+K + + KE ++ V+
Sbjct: 12 QAEDIRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKEALEGKEGSMENEIAVL 70
Query: 367 GSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
+ H N+V L Y S H Y+ M +S +R + S L
Sbjct: 71 HKIKHPNIVALDDIYESGG-----HLYLIMQLVSGGELFDRIVEKGFYTERDASRLIFQV 125
Query: 427 SRAIAYLHSKGPANSHGNIKSSNIL---LSKSYEARISDFGLAHLASPSS---TPNRIDG 480
A+ YLH G H ++K N+L L + + ISDFGL+ + P S T G
Sbjct: 126 LDAVKYLHDLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
Y APEV + S+ D +S GV+ LL G P Q L E D P W
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|3ODZ|X Chain X, Crystal Structure Of P38alpha Y323r Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|3OD6|X Chain X, Crystal Structure Of P38alpha Y323t Active Mutant
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1A06|A Chain A, Calmodulin-Dependent Protein Kinase From Rat
Length = 332
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 67/239 (28%), Positives = 97/239 (40%), Gaps = 27/239 (11%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE--FREKMEVV 366
+A D+ D+ +VLG G F A + +VA+K + + KE ++ V+
Sbjct: 12 QAEDIRDIYDFR-DVLGTGAFSEVILAEDKRTQKLVAIKCIAKKALEGKEGSMENEIAVL 70
Query: 367 GSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
+ H N+V L Y S L+ + G L +R + S L
Sbjct: 71 HKIKHPNIVALDDIYESGGHLYLIMQLVSGGELF-----DRIVEKGFYTERDASRLIFQV 125
Query: 427 SRAIAYLHSKGPANSHGNIKSSNIL---LSKSYEARISDFGLAHLASPSS---TPNRIDG 480
A+ YLH G H ++K N+L L + + ISDFGL+ + P S T G
Sbjct: 126 LDAVKYLHDLGIV--HRDLKPENLLYYSLDEDSKIMISDFGLSKMEDPGSVLSTACGTPG 183
Query: 481 YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
Y APEV + S+ D +S GV+ LL G P Q L E D P W
Sbjct: 184 YVAPEVLAQKPYSKAVDCWSIGVIAYILLCGYPPFYDENDAKLFEQILKAEYEFDSPYW 242
>pdb|3K3J|A Chain A, P38alpha Bound To Novel Dfg-Out Compound Pf-00416121
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 91 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 141
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 142 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3E92|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
pdb|3E93|A Chain A, Crystal Structure Of P38 Kinase In Complex With A Biaryl
Amide Inhibitor
Length = 371
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 100 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 150
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 151 YIHSADII--HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 208
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|2X7F|A Chain A, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|B Chain B, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|C Chain C, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|D Chain D, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
pdb|2X7F|E Chain E, Crystal Structure Of The Kinase Domain Of Human Traf2- And
Nck-Interacting Kinase With Wee1chk1 Inhibitor
Length = 326
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 97/213 (45%), Gaps = 28/213 (13%)
Query: 322 AEVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAY 380
E++G GT+G YK ++ G + A+K + E+E ++++ ++ H + A
Sbjct: 29 VELVGNGTYGQVYKGRHVKTGQLAAIKVMDVTGDEEEEIKQEINMLKKYSHHRNI---AT 85
Query: 381 YYS----------RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
YY D+ LV ++ GS++ L+ +G L E + + R +
Sbjct: 86 YYGAFIKKNPPGMDDQLWLVMEFCGAGSVTDLIKNTKG---NTLKEEWIAYICREILRGL 142
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL-AHLASPSSTPNRIDG---YRAPEV 486
++LH H +IK N+LL+++ E ++ DFG+ A L N G + APEV
Sbjct: 143 SHLHQHKVI--HRDIKGQNVLLTENAEVKLVDFGVSAQLDRTVGRRNTFIGTPYWMAPEV 200
Query: 487 TDARKVSQ-----KADVYSFGVLLLELLTGKAP 514
+ K+D++S G+ +E+ G P
Sbjct: 201 IACDENPDATYDFKSDLWSLGITAIEMAEGAPP 233
>pdb|2BAL|A Chain A, P38alpha Map Kinase Bound To Pyrazoloamine
pdb|4AA5|A Chain A, P38alpha Map Kinase Bound To Cmpd 33
Length = 365
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 94 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 145 YIHSADII--HRDLKPSNLAVNEDXELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|1DI9|A Chain A, The Structure Of P38 Mitogen-Activated Protein Kinase In
Complex With 4-[3-Methylsulfanylanilino]-6,7-
Dimethoxyquinazoline
pdb|1KV1|A Chain A, P38 Map Kinase In Complex With Inhibitor 1
pdb|1KV2|A Chain A, Human P38 Map Kinase In Complex With Birb 796
pdb|1WBO|A Chain A, Fragment Based P38 Inhibitors
pdb|1W7H|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W82|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W83|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1W84|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|1ZZ2|A Chain A, Two Classes Of P38alpha Map Kinase Inhibitors Having A
Common Diphenylether Core But Exhibiting Divergent
Binding Modes
pdb|1WBN|A Chain A, Fragment Based P38 Inhibitors
pdb|1WBS|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBT|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-based Lead Generation.
pdb|1WBV|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1WBW|A Chain A, Identification Of Novel P38 Alpha Map Kinase Inhibitors
Using Fragment-Based Lead Generation.
pdb|1ZYJ|A Chain A, Human P38 Map Kinase In Complex With Inhibitor 1a
pdb|2ZAZ|A Chain A, Crystal Structure Of P38 In Complex With 4-Anilino
Quinoline Inhibitor
pdb|2ZB0|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|2ZB1|A Chain A, Crystal Structure Of P38 In Complex With Biphenyl Amide
Inhibitor
pdb|3HL7|A Chain A, Crystal Structure Of Human P38alpha Complexed With Sd-0006
pdb|3HLL|A Chain A, Crystal Structure Of Human P38alpha Complexed With
Ph-797804
pdb|3HP2|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyridinone Compound
pdb|3HP5|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Pyrimidopyridazinone Compound
pdb|3KF7|A Chain A, Crystal Structure Of Human P38alpha Complexed With A
Triazolopyrimidine Compound
pdb|3MGY|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3ROC|A Chain A, Crystal Structure Of Human P38 Alpha Complexed With A
Pyrimidinone Compound
pdb|3RIN|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|4E5B|A Chain A, Structure Of P38a Map Kinase Without Bog
pdb|4E6A|A Chain A, P38a-Pia23 Complex
pdb|4E6C|A Chain A, P38a-perifosine Complex
pdb|4E8A|A Chain A, The Crystal Structure Of P38a Map Kinase In Complex With
Pia24
Length = 360
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3NNU|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp1376
pdb|3NNV|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp437
pdb|3NNW|A Chain A, Crystal Structure Of P38 Alpha In Complex With Dp802
Length = 354
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2NPQ|A Chain A, A Novel Lipid Binding Site In The P38 Alpha Map Kinase
Length = 367
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 37 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 95
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 96 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 146
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 147 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 204
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 205 MHYNQTVDIWSVGCIMAELLTGR 227
>pdb|3HVC|A Chain A, Crystal Structure Of Human P38alpha Map Kinase
Length = 362
Score = 57.8 bits (138), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 91 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 141
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 142 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGRT 223
>pdb|3OEF|X Chain X, Crystal Structure Of Y323f Inactive Mutant Of P38alpha Map
Kinase
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|1ZZL|A Chain A, Crystal Structure Of P38 With Triazolopyridine
pdb|2YIX|A Chain A, Triazolopyridine Inhibitors Of P38
Length = 351
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 86 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 136
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 137 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 194
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|1OZ1|A Chain A, P38 Mitogen-Activated Kinase In Complex With 4-Azaindole
Inhibitor
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 101 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 151
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 152 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 209
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|2GFS|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3201195
pdb|3FKL|A Chain A, P38 Kinase Crystal Structure In Complex With Ro9552
pdb|3FKN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro7125
pdb|3FL4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro5634
pdb|3FLQ|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((S)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin
pdb|3FLS|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-((R)-2-Methanesulfonyl-1-Methyl-
Ethylamino)-8-Methyl-8h-Pyrido[2,3-D]pyrimidin-7-One
pdb|3FLW|A Chain A, P38 Kinase Crystal Structure In Complex With Pamapimod
pdb|3FLY|A Chain A, P38 Kinase Crystal Structure In Complex With 6-(2,4-
Difluoro-Phenoxy)-2-Isopropylamino-8-Methyl-8h-Pyrido[2,
3- D]pyrimidin-7-One
pdb|3FLZ|A Chain A, P38 Kinase Crystal Structure In Complex With
8-Methyl-6-Phenoxy-2-
(Tetrahydro-Pyran-4-Ylamino)-8h-Pyrido[2,
3-D]pyrimidin-7-One
pdb|3FMH|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((R)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FMJ|A Chain A, P38 Kinase Crystal Structure In Complex With
4-(5-Methyl-3-Phenyl- Isoxazol-4-Yl)-Pyrimidin-2-Ylamine
pdb|3FMK|A Chain A, P38 Kinase Crystal Structure In Complex With
6-(2,4-Difluoro-Phenoxy)-
8-Methyl-2-((S)-1-Methyl-2-Tetrazol-2-Yl-Ethylamino)-8h-
Pyrido[2,3- D]pyrimidin-7-One
pdb|3FML|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6224
pdb|3FMM|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6226
pdb|3FMN|A Chain A, P38 Kinase Crystal Structure In Complex With Ro2530
pdb|3FSF|A Chain A, P38 Kinase Crystal Structure In Complex With 3-(2,6-
Dichloro-Phenyl)-7-[4-(2-Diethylamino-Ethoxy)-
Phenylamino]-
1-Methyl-3,4-Dihydro-1h-Pyrimido[4,5-D]pyrimidin-2-One
pdb|3FSK|A Chain A, P38 Kinase Crystal Structure In Complex With Ro6257
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 101 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 151
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 152 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 209
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGRT 233
>pdb|3ORN|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4987655 And Mgamp-Pnp
pdb|3OS3|A Chain A, Mitogen-Activated Protein Kinase Kinase 1 (Mek1) In
Complex With Ch4858061 And Mgatp
Length = 307
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/195 (23%), Positives = 94/195 (48%), Gaps = 11/195 (5%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFREKMEVVGSMDHENLVPLRAYY 381
LG G G +K + + +V ++L + + + +++V+ + +V +
Sbjct: 14 LGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQIIRELQVLHECNSPYIVGFYGAF 73
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
YS E + ++M GSL +L + AGR P + +++ + + YL K
Sbjct: 74 YSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILGKVSIAVIKGLTYLREKHKI-M 127
Query: 442 HGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRIDGYRAPEVTDARKVSQKADVY 499
H ++K SNIL++ E ++ DFG++ + S +++ Y +PE S ++D++
Sbjct: 128 HRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMSPERLQGTHYSVQSDIW 187
Query: 500 SFGVLLLELLTGKAP 514
S G+ L+E+ G+ P
Sbjct: 188 SMGLSLVEMAVGRYP 202
>pdb|3TZM|A Chain A, Tgf-Beta Receptor Type 1 In Complex With Sb431542
Length = 309
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG FG ++ G VAVK + E+ + + E+ + + HEN++
Sbjct: 15 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 67
Query: 381 YYSRDEK--------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ + D K LV DY GSL L+ R + E LAL + +A+
Sbjct: 68 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 121
Query: 433 LHSK------GPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSS---TPNRIDG- 480
LH + PA +H ++KS NIL+ K+ I+D GLA H ++ + PN G
Sbjct: 122 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 181
Query: 481 --YRAPEVTDAR------KVSQKADVYSFGVLLLEL 508
Y APEV D + ++AD+Y+ G++ E+
Sbjct: 182 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 217
>pdb|3MPT|A Chain A, Crystal Structure Of P38 Kinase In Complex With A
Pyrrole-2- Carboxamide Inhibitor
Length = 371
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 41 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 99
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 100 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 150
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 151 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 208
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 209 MHYNQTVDIWSVGCIMAELLTGRT 232
>pdb|3GQI|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 36 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 92
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEFSFNPSHNPEEQLSSKD 151
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 152 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDXXKKT 209
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 264
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 265 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1PY5|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With
Inhibitor
Length = 326
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG FG ++ G VAVK + E+ + + E+ + + HEN++
Sbjct: 35 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 87
Query: 381 YYSRDEK--------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ + D K LV DY GSL L+ R + E LAL + +A+
Sbjct: 88 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 141
Query: 433 LHSK------GPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSS---TPNRIDG- 480
LH + PA +H ++KS NIL+ K+ I+D GLA H ++ + PN G
Sbjct: 142 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 201
Query: 481 --YRAPEVTDAR------KVSQKADVYSFGVLLLEL 508
Y APEV D + ++AD+Y+ G++ E+
Sbjct: 202 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 237
>pdb|3GCU|A Chain A, Human P38 Map Kinase In Complex With Rl48
pdb|3GCU|B Chain B, Human P38 Map Kinase In Complex With Rl48
pdb|3HV4|A Chain A, Human P38 Map Kinase In Complex With Rl51
pdb|3HV4|B Chain B, Human P38 Map Kinase In Complex With Rl51
pdb|3HV5|A Chain A, Human P38 Map Kinase In Complex With Rl24
pdb|3HV5|B Chain B, Human P38 Map Kinase In Complex With Rl24
pdb|3HV6|A Chain A, Human P38 Map Kinase In Complex With Rl39
pdb|3HV7|A Chain A, Human P38 Map Kinase In Complex With Rl38
pdb|3HUC|A Chain A, Human P38 Map Kinase In Complex With Rl40
pdb|3LFA|A Chain A, Human P38 Map Kinase In Complex With Dasatinib
pdb|3QUE|A Chain A, Human P38 Map Kinase In Complex With Skepinone-L
pdb|3QUD|A Chain A, Human P38 Map Kinase In Complex With
2-Amino-Phenylamino-Benzophenone
pdb|3UVP|A Chain A, Human P38 Map Kinase In Complex With A Benzamide
Substituted Benzosuberone
pdb|3UVQ|A Chain A, Human P38 Map Kinase In Complex With A Dibenzosuberone
Derivative
pdb|4EH2|A Chain A, Human P38 Map Kinase In Complex With Np-F1 And Rl87
pdb|4EH3|A Chain A, Human P38 Map Kinase In Complex With Np-F2 And Rl87
pdb|4EH4|A Chain A, Human P38 Map Kinase In Complex With Np-F3 And Rl87
pdb|4EH5|A Chain A, Human P38 Map Kinase In Complex With Np-F4 And Rl87
pdb|4EH6|A Chain A, Human P38 Map Kinase In Complex With Np-F5 And Rl87
pdb|4EH7|A Chain A, Human P38 Map Kinase In Complex With Np-F6 And Rl87
pdb|4EH8|A Chain A, Human P38 Map Kinase In Complex With Np-F7 And Rl87
pdb|4EH9|A Chain A, Human P38 Map Kinase In Complex With Np-F11 And Rl87
pdb|4EHV|A Chain A, Human P38 Map Kinase In Complex With Np-F10 And Rl87
pdb|3UVR|A Chain A, Human P38 Map Kinase In Complex With Km064
pdb|4DLI|A Chain A, Human P38 Map Kinase In Complex With Rl87
pdb|4DLJ|A Chain A, Human P38 Map Kinase In Complex With Rl163
Length = 360
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BAJ|A Chain A, P38alpha Bound To Pyrazolourea
pdb|2BAK|A Chain A, P38alpha Map Kinase Bound To Mpaq
pdb|4A9Y|A Chain A, P38alpha Map Kinase Bound To Cmpd 8
pdb|4AA0|A Chain A, P38alpha Map Kinase Bound To Cmpd 2
pdb|4AA4|A Chain A, P38alpha Map Kinase Bound To Cmpd 22
pdb|4AAC|A Chain A, P38alpha Map Kinase Bound To Cmpd 29
Length = 365
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 94 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 145 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 202
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 203 MHYNQTVDIWSVGCIMAELLTGR 225
>pdb|2Y4I|C Chain C, Ksr2-Mek1 Heterodimer
Length = 395
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/216 (22%), Positives = 101/216 (46%), Gaps = 11/216 (5%)
Query: 304 FFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFR 360
F + + +L+D LG G G +K + + +V ++L + + +
Sbjct: 55 FLTQKQKVGELKDDDFEKISELGAGNGGVVFKVSHKPSGLVMARKLIHLEIKPAIRNQII 114
Query: 361 EKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRS 420
+++V+ + +V +YS E + ++M GSL +L + AGR P +
Sbjct: 115 RELQVLHECNSPYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KKAGRIP--EQILG 169
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRI 478
+++ + + YL K H ++K SNIL++ E ++ DFG++ + S +++
Sbjct: 170 KVSIAVIKGLTYLREKHKI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGT 228
Query: 479 DGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y +PE S ++D++S G+ L+E+ G+ P
Sbjct: 229 RSYMSPERLQGTHYSVQSDIWSMGLSLVEMAVGRYP 264
>pdb|3HRB|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|3MW1|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
pdb|2YIS|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase.
pdb|2YIW|A Chain A, Triazolopyridine Inhibitors Of P38 Kinase
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 29 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 87
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 88 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 138
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 139 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 196
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 197 MHYNQTVDIWSVGCIMAELLTGR 219
>pdb|1RW8|A Chain A, Crystal Structure Of Tgf-Beta Receptor I Kinase With Atp
Site Inhibitor
Length = 301
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG FG ++ G VAVK + E+ + + E+ + + HEN++
Sbjct: 10 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 62
Query: 381 YYSRDEK--------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ + D K LV DY GSL L+ R + E LAL + +A+
Sbjct: 63 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 116
Query: 433 LHSK------GPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSS---TPNRIDG- 480
LH + PA +H ++KS NIL+ K+ I+D GLA H ++ + PN G
Sbjct: 117 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 176
Query: 481 --YRAPEVTDAR------KVSQKADVYSFGVLLLEL 508
Y APEV D + ++AD+Y+ G++ E+
Sbjct: 177 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 212
>pdb|3ZSG|A Chain A, X-Ray Structure Of P38alpha Bound To Tak-715
pdb|3ZSH|A Chain A, X-Ray Structure Of P38alpha Bound To Scio-469
pdb|3ZSI|A Chain A, X-Ray Structure Of P38alpha Bound To Vx-745
pdb|3ZS5|A Chain A, Structural Basis For Kinase Selectivity Of Three Clinical
P38alpha Inhibitors
Length = 362
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 91 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 141
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 142 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|3S3I|A Chain A, P38 Kinase Crystal Structure In Complex With Small
Molecule Inhibitor
Length = 349
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 27 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 85
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 86 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 136
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 137 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 194
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 195 MHYNQTVDIWSVGCIMAELLTGR 217
>pdb|3FI4|A Chain A, P38 Kinase Crystal Structure In Complex With Ro4499
pdb|3FKO|A Chain A, P38 Kinase Crystal Structure In Complex With Ro3668
pdb|3FLN|C Chain C, P38 Kinase Crystal Structure In Complex With R1487
Length = 372
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 42 VGSGAYGSVCAAFDTKTGLRVAVKKLSKPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 100
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 101 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 151
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 152 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 209
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 210 MHYNQTVDIWSVGCIMAELLTGR 232
>pdb|2WOT|A Chain A, Alk5 In Complex With 4-((5,6-Dimethyl-2-(2-Pyridyl)-3-
Pyridyl)oxy)-N-(3,4,5-Trimethoxyphenyl)pyridin-2-Amine
pdb|2WOU|A Chain A, Alk5 In Complex With
4-((4-((2,6-Dimethyl-3-Pyridyl)oxy)-2-
Pyridyl)amino)benzenesulfonamide
Length = 306
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG FG ++ G VAVK + E+ + + E+ + + HEN++
Sbjct: 12 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 64
Query: 381 YYSRDEK--------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ + D K LV DY GSL L+ R + E LAL + +A+
Sbjct: 65 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 118
Query: 433 LHSK------GPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSS---TPNRIDG- 480
LH + PA +H ++KS NIL+ K+ I+D GLA H ++ + PN G
Sbjct: 119 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 178
Query: 481 --YRAPEVTDAR------KVSQKADVYSFGVLLLEL 508
Y APEV D + ++AD+Y+ G++ E+
Sbjct: 179 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 214
>pdb|1BL6|A Chain A, The Complex Structure Of The Map Kinase P38SB216995
pdb|1BL7|A Chain A, The Complex Structure Of The Map Kinase P38SB220025
pdb|2EWA|A Chain A, Dual Binding Mode Of Pyridinylimidazole To Map Kinase P38
pdb|1A9U|A Chain A, The Complex Structure Of The Map Kinase P38SB203580
pdb|3HA8|A Chain A, The Complex Structure Of The Map Kinase P38COMPOUND 14B
Length = 379
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 49 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 108 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 158
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 159 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 216
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGRT 240
>pdb|1VJY|A Chain A, Crystal Structure Of A Naphthyridine Inhibitor Of Human
Tgf- Beta Type I Receptor
pdb|3GXL|A Chain A, Alk-5 Kinase Complex With Gw857175
pdb|3HMM|A Chain A, Structure Of Alk5 + Gw855857
Length = 303
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG FG ++ G VAVK + E+ + + E+ + + HEN++
Sbjct: 9 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 61
Query: 381 YYSRDEK--------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ + D K LV DY GSL L+ R + E LAL + +A+
Sbjct: 62 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 115
Query: 433 LHSK------GPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSS---TPNRIDG- 480
LH + PA +H ++KS NIL+ K+ I+D GLA H ++ + PN G
Sbjct: 116 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 175
Query: 481 --YRAPEVTDAR------KVSQKADVYSFGVLLLEL 508
Y APEV D + ++AD+Y+ G++ E+
Sbjct: 176 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 211
>pdb|3K3I|A Chain A, P38alpha Bound To Novel Dgf-Out Compound Pf-00215955
Length = 350
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 28 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 86
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 87 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 137
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 138 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 195
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 196 MHYNQTVDIWSVGCIMAELLTGR 218
>pdb|1B6C|B Chain B, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|D Chain D, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|F Chain F, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1B6C|H Chain H, Crystal Structure Of The Cytoplasmic Domain Of The Type I
Tgf-Beta Receptor In Complex With Fkbp12
pdb|1IAS|A Chain A, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|B Chain B, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|C Chain C, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|D Chain D, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|1IAS|E Chain E, Cytoplasmic Domain Of Unphosphorylated Type I Tgf-Beta
Receptor Crystallized Without Fkbp12
pdb|3FAA|A Chain A, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|B Chain B, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|C Chain C, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|D Chain D, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3FAA|E Chain E, Crystal Structure Of Tgfbri Complexed With A 2-
Aminoimidazole Inhibitor
pdb|3KCF|A Chain A, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|B Chain B, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|C Chain C, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|D Chain D, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|3KCF|E Chain E, Crystal Structure Of Tgfbri Complexed With A Pyrazolone
Inhibitor
pdb|2X7O|A Chain A, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|B Chain B, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|C Chain C, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|D Chain D, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
pdb|2X7O|E Chain E, Crystal Structure Of Tgfbri Complexed With An Indolinone
Inhibitor
Length = 342
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/216 (29%), Positives = 100/216 (46%), Gaps = 43/216 (19%)
Query: 323 EVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAY 380
E +GKG FG ++ G VAVK + E+ + + E+ + + HEN++
Sbjct: 48 ESIGKGRFGEVWRGKWR-GEEVAVKIFS--SREERSWFREAEIYQTVMLRHENILG---- 100
Query: 381 YYSRDEK--------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ + D K LV DY GSL L+ R + E LAL + +A+
Sbjct: 101 FIAADNKDNGTWTQLWLVSDYHEHGSLFDYLN------RYTVTVEGMIKLALSTASGLAH 154
Query: 433 LHSK------GPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSS---TPNRIDG- 480
LH + PA +H ++KS NIL+ K+ I+D GLA H ++ + PN G
Sbjct: 155 LHMEIVGTQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVRHDSATDTIDIAPNHRVGT 214
Query: 481 --YRAPEVTDAR------KVSQKADVYSFGVLLLEL 508
Y APEV D + ++AD+Y+ G++ E+
Sbjct: 215 KRYMAPEVLDDSINMKHFESFKRADIYAMGLVFWEI 250
>pdb|3KQ7|A Chain A, Structure Of Human P38alpha With N-[4-Methyl-3-(6-{[2-(1-
Methylpyrrolidin-2-Yl)ethyl]amino}pyridine-3-
Amido)phenyl]- 2-(Morpholin-4-Yl)pyridine-4-Carboxamide
Length = 380
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 50 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 109 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 159
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 160 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 217
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGRT 241
>pdb|3HEC|A Chain A, P38 In Complex With Imatinib
pdb|3HEG|A Chain A, P38 In Complex With Sorafenib
Length = 348
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 26 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 85 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 135
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 136 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 193
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3DT1|A Chain A, P38 Complexed With A Quinazoline Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 112 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 162
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 163 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 220
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 221 MHYNQTVDIWSVGCIMAELLTGRT 244
>pdb|2LGC|A Chain A, Joint Nmr And X-Ray Refinement Reveals The Structure Of A
Novel Dibenzo[a,D]cycloheptenone InhibitorP38 MAP KINASE
COMPLEX IN Solution
Length = 359
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 95/202 (47%), Gaps = 25/202 (12%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 35 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 93
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
P R+ D L+ H MG+ N L + L R + Y
Sbjct: 94 VFTPARSLEEFNDVYLVTH---LMGA-----DLNNIVKCQKLTDDHVQFLIYQILRGLKY 145
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DAR 490
+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 146 IHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 203
Query: 491 KVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 204 HYNQTVDIWSVGCIMAELLTGR 225
>pdb|4FR4|A Chain A, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|B Chain B, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|C Chain C, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|D Chain D, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|E Chain E, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
pdb|4FR4|F Chain F, Crystal Structure Of Human SerineTHREONINE-Protein Kinase
32a (Yank1)
Length = 384
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 98/223 (43%), Gaps = 22/223 (9%)
Query: 303 VFFGKGDRAFDLEDLLRASAEVLGKGTFGTA----YKATLEMGIVVAVKRLKDVTVSE-K 357
VF D FD ++LRA +GKG+FG T +M + + + K V +E +
Sbjct: 5 VFDENEDVNFDHFEILRA----IGKGSFGKVCIVQKNDTKKMYAMKYMNKQKCVERNEVR 60
Query: 358 EFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWE 417
++++++ ++H LV L + ++ +V D + G L L N E
Sbjct: 61 NVFKELQIMQGLEHPFLVNLWYSFQDEEDMFMVVDLLLGGDLRYHLQQN-----VHFKEE 115
Query: 418 TRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR 477
T A+ YL ++ H ++K NILL + I+DF +A + +
Sbjct: 116 TVKLFICELVMALDYLQNQRII--HRDMKPDNILLDEHGHVHITDFNIAAMLPRETQITT 173
Query: 478 IDG---YRAPEVTDARK---VSQKADVYSFGVLLLELLTGKAP 514
+ G Y APE+ +RK S D +S GV ELL G+ P
Sbjct: 174 MAGTKPYMAPEMFSSRKGAGYSFAVDWWSLGVTAYELLRGRRP 216
>pdb|1M7Q|A Chain A, Crystal Structure Of P38 Map Kinase In Complex With A
Dihydroquinazolinone Inhibitor
pdb|1OUK|A Chain A, The Structure Of P38 Alpha In Complex With A
Pyridinylimidazole Inhibitor
pdb|1OUY|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydropyrido- Pyrimidine Inhibitor
pdb|1R39|A Chain A, The Structure Of P38alpha
pdb|1YQJ|A Chain A, Crystal Structure Of P38 Alpha In Complex With A Selective
Pyridazine Inhibitor
pdb|2OKR|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2OKR|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|A Chain A, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|B Chain B, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|1WFC|A Chain A, Structure Of Apo, Unphosphorylated, P38 Mitogen Activated
Protein Kinase P38 (P38 Map Kinase) The Mammalian
Homologue Of The Yeast Hog1 Protein
pdb|3DS6|A Chain A, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|B Chain B, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|C Chain C, P38 Complex With A Phthalazine Inhibitor
pdb|3DS6|D Chain D, P38 Complex With A Phthalazine Inhibitor
pdb|3FC1|X Chain X, Crystal Structure Of P38 Kinase Bound To
Pyrimido-Pyridazinone Inhibitor
pdb|3GFE|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor
pdb|3ITZ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridazine Inhibitor
pdb|3LHJ|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Pyrazolopyridinone Inhibitor.
pdb|3ZYA|A Chain A, Human P38 Map Kinase In Complex With 2-Amino-Phenylamino-
Dibenzosuberone
pdb|3U8W|A Chain A, Crystal Structure Of P38a Mitogen-Activated Protein Kinase
In Complex With A Triazolopyridazinone Inhibitor
Length = 366
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 95 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 145
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 146 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|4EWQ|A Chain A, Human P38 Alpha Mapk In Complex With A Pyridazine Based
Inhibitor
Length = 383
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 101/208 (48%), Gaps = 37/208 (17%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 53 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 111
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 112 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 162
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPE 485
Y+HS H ++K SN+ +++ E +I DFGLA T + + G YRAPE
Sbjct: 163 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGYVATRWYRAPE 215
Query: 486 VT-DARKVSQKADVYSFGVLLLELLTGK 512
+ + +Q D++S G ++ ELLTG+
Sbjct: 216 IMLNWMHYNQTVDIWSVGCIMAELLTGR 243
>pdb|2YA9|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YA9|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
pdb|2YAA|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAA|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Atp
pdb|2YAB|A Chain A, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
pdb|2YAB|B Chain B, Crystal Structure Of The Autoinhibited Form Of Mouse Dapk2
In Complex With Amp
Length = 361
Score = 57.4 bits (137), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 56/207 (27%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G+ A K +K V +E ++ ++ + H N+
Sbjct: 18 EELGSGQFAIVKKCREKSTGLEYAAKFIKKRQSRASRRGVCREEIEREVSILRQVLHPNI 77
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L Y +R + +L+ + + G L L A + L+ E + + YLH
Sbjct: 78 ITLHDVYENRTDVVLILELVSGGELFDFL-----AQKESLSEEEATSFIKQILDGVNYLH 132
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
+K A H ++K NI LL K+ ++ DFGLAH I G + APE+
Sbjct: 133 TKKIA--HFDLKPENIMLLDKNIPIPHIKLIDFGLAHEIEDGVEFKNIFGTPEFVAPEIV 190
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 191 NYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1OVE|A Chain A, The Structure Of P38 Alpha In Complex With A
Dihydroquinolinone
pdb|1R3C|A Chain A, The Structure Of P38alpha C162s Mutant
pdb|2I0H|A Chain A, The Structure Of P38alpha In Complex With An
Arylpyridazinone
pdb|3GC7|A Chain A, The Structure Of P38alpha In Complex With A
Dihydroquinazolinone
pdb|3NEW|A Chain A, P38-Alpha Complexed With Compound 10
Length = 366
Score = 57.4 bits (137), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 95 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 145
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 146 YIHSADII--HRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGRT 227
>pdb|2Y8O|A Chain A, Crystal Structure Of Human P38alpha Complexed With A Mapk
Docking Peptide
Length = 362
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 32 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 90
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 91 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 141
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 142 YIHSADII--HRDLKPSNLAVNEDSELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 199
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 200 MHYNQTVDIWSVGCIMAELLTGR 222
>pdb|1GZK|A Chain A, Molecular Mechanism For The Regulation Of Protein Kinase B
Akt By Hydrophobic Motif Phosphorylation
pdb|1GZO|A Chain A, Structure Of Protein Kinase B Unphosphorylated
Length = 315
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K L K+V +++ E + V+ + H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L H +R T E R+ GA A+ Y
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARF-YGAEIVSALEY 120
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + +IK N++L K +I+DFGL A + + TP Y AP
Sbjct: 121 LHSRDVV--YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE----YLAP 174
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2Y0A|A Chain A, Structure Of Dapk1 Construct Residues 1-304
Length = 326
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE----KMEVVGSMDHENLVPLR 378
VLGKG+FG ++ G AVK + V +K +E +++++ +DH N++ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 92
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
++ + LV + G L + + R L+ I Y+H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKI 147
Query: 439 ANSHGNIKSSNILL-SKSYEA--RISDFGLA-HLASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K N+LL SKS +A RI DFGL+ H + ++I Y APEV
Sbjct: 148 V--HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TY 204
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
+K DV+S GV+L LL+G P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPP 226
>pdb|3VUL|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKVVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDGY-RAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + Y RAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S GV++ E++ G
Sbjct: 208 IWSVGVIMGEMIKG 221
>pdb|1GZN|A Chain A, Structure Of Pkb Kinase Domain
Length = 335
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K L K+V +++ E + V+ + H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L H +R T E R+ GA A+ Y
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARF-YGAEIVSALEY 120
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + +IK N++L K +I+DFGL A + + TP Y AP
Sbjct: 121 LHSRDVV--YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE----YLAP 174
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|1O6L|A Chain A, Crystal Structure Of An Activated Akt/protein Kinase B
(pkb-pif Chimera) Ternary Complex With Amp-pnp And Gsk3
Peptide
Length = 337
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K L K+V +++ E + V+ + H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L H +R T E R+ GA A+ Y
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARF-YGAEIVSALEY 120
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + +IK N++L K +I+DFGL A + TP Y AP
Sbjct: 121 LHSRDVV--YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE----YLAP 174
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|2HW6|A Chain A, Crystal Structure Of Mnk1 Catalytic Domain
pdb|2HW6|B Chain B, Crystal Structure Of Mnk1 Catalytic Domain
Length = 307
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 100/223 (44%), Gaps = 29/223 (13%)
Query: 314 LEDLLRASAEVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKE--FREKMEVVGSMD 370
ED+ + ++E+LG+G + A +L+ G AVK ++ + FRE +
Sbjct: 10 FEDMYKLTSELLGEGAYAKVQGAVSLQNGKEYAVKIIEKQAGHSRSRVFREVETLYQCQG 69
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
++N++ L ++ LV + + GS+ A + + N S + + A+
Sbjct: 70 NKNILELIEFFEDDTRFYLVFEKLQGGSILAHIQKQKH-----FNEREASRVVRDVAAAL 124
Query: 431 AYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLAH----------LASPS-STPN 476
+LH+KG A H ++K NIL K +I DF L + +P +TP
Sbjct: 125 DFLHTKGIA--HRDLKPENILCESPEKVSPVKICDFDLGSGMKLNNSCTPITTPELTTPC 182
Query: 477 RIDGYRAPEVTD-----ARKVSQKADVYSFGVLLLELLTGKAP 514
Y APEV + A ++ D++S GV+L +L+G P
Sbjct: 183 GSAEYMAPEVVEVFTDQATFYDKRCDLWSLGVVLYIMLSGYPP 225
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE----KMEVVGSMDHENLVPLR 378
VLGKG+FG ++ G AVK + V +K +E +++++ +DH N++ L
Sbjct: 56 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 115
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
++ + LV + G L + + R L+ I Y+H
Sbjct: 116 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKI 170
Query: 439 ANSHGNIKSSNILL-SKSYEA--RISDFGLA-HLASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K N+LL SKS +A RI DFGL+ H + ++I Y APEV
Sbjct: 171 V--HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TY 227
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
+K DV+S GV+L LL+G P
Sbjct: 228 DEKCDVWSTGVILYILLSGCPP 249
>pdb|1S9I|A Chain A, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
pdb|1S9I|B Chain B, X-Ray Structure Of The Human Mitogen-Activated Protein
Kinase Kinase 2 (Mek2)in A Complex With Ligand And Mgatp
Length = 354
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 95/205 (46%), Gaps = 13/205 (6%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVS---EKEFREKMEVVGSMDH 371
+D R S LG G G K ++ ++L + + + +++V+ +
Sbjct: 16 DDFERISE--LGAGNGGVVTKVQHRPSGLIMARKLIHLEIKPAIRNQIIRELQVLHECNS 73
Query: 372 ENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
+V +YS E + ++M GSL +L + A R P E +++ R +A
Sbjct: 74 PYIVGFYGAFYSDGEISICMEHMDGGSLDQVL---KEAKRIP--EEILGKVSIAVLRGLA 128
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRIDGYRAPEVTDA 489
YL K H ++K SNIL++ E ++ DFG++ + S +++ Y APE
Sbjct: 129 YLREKHQI-MHRDVKPSNILVNSRGEIKLCDFGVSGQLIDSMANSFVGTRSYMAPERLQG 187
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
S ++D++S G+ L+EL G+ P
Sbjct: 188 THYSVQSDIWSMGLSLVELAVGRYP 212
>pdb|1MRV|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
pdb|1MRY|A Chain A, Crystal Structure Of An Inactive Akt2 Kinase Domain
Length = 339
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 96/210 (45%), Gaps = 34/210 (16%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K L K+V +++ E + V+ + H L
Sbjct: 14 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 70
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L H +R T E R+ GA A+ Y
Sbjct: 71 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARF-YGAEIVSALEY 123
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + +IK N++L K +I+DFGL A + + TP Y AP
Sbjct: 124 LHSRDVV--YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKTFCGTPE----YLAP 177
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 178 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 207
>pdb|2JDO|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDR|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With The Inhibitor
A- 443654
pdb|2UW9|A Chain A, Structure Of Pkb-Beta (Akt2) Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|2X39|A Chain A, Structure Of
4-Amino-N-(4-Chlorobenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidine-4-Carboxamide Bound To Pkb
pdb|2XH5|A Chain A, Structure Of 4-(4-Tert-Butylbenzyl)-1-(7h-Pyrrolo(2,3-D)
Pyrimidin-4-Yl)piperidin-4-Amine Bound To Pkb
Length = 342
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K L K+V +++ E + V+ + H L
Sbjct: 16 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 72
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L H +R T E R+ GA A+ Y
Sbjct: 73 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARF-YGAEIVSALEY 125
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + +IK N++L K +I+DFGL A + TP Y AP
Sbjct: 126 LHSRDVV--YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE----YLAP 179
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3V3V|A Chain A, Structural And Functional Analysis Of Quercetagetin, A
Natural Jnk1 Inhibitor
Length = 379
Score = 57.0 bits (136), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPEVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|1IAN|A Chain A, Human P38 Map Kinase Inhibitor Complex
pdb|2QD9|A Chain A, P38 Alpha Map Kinase Inhibitor Based On Heterobicyclic
Scaffolds
pdb|2RG5|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11b
pdb|2RG6|A Chain A, Phenylalanine Pyrrolotriazine P38 Alpha Map Kinase
Inhibitor Compound 11j
pdb|3C5U|A Chain A, P38 Alpha Map Kinase Complexed With A Benzothiazole Based
Inhibitor
pdb|3BV2|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 30
pdb|3BV3|A Chain A, Morpholino Pyrrolotriazine P38 Alpha Map Kinase Inhibitor
Compound 2
pdb|3BX5|A Chain A, P38 Alpha Map Kinase Complexed With Bms-640994
pdb|3L8X|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Pyrimidine
Based Inhibitor
pdb|3NWW|A Chain A, P38 Alpha Kinase Complexed With A
2-Aminothiazol-5-Yl-Pyrimidine Based Inhibitor
pdb|3MVL|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVL|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7k
pdb|3MVM|A Chain A, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3MVM|B Chain B, P38 Alpha Map Kinase Complexed With Pyrrolotriazine
Inhibitor 7v
pdb|3OCG|A Chain A, P38 Alpha Kinase Complexed With A 5-Amino-Pyrazole Based
Inhibitor
pdb|3S4Q|A Chain A, P38 Alpha Kinase Complexed With A Pyrazolo-Triazine Based
Inhibitor
Length = 366
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 36 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 95 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 145
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 146 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 56.6 bits (135), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE----KMEVVGSMDHENLVPLR 378
VLGKG+FG ++ G AVK + V +K +E +++++ +DH N++ L
Sbjct: 57 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 116
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
++ + LV + G L + + R L+ I Y+H
Sbjct: 117 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKI 171
Query: 439 ANSHGNIKSSNILL-SKSYEA--RISDFGLA-HLASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K N+LL SKS +A RI DFGL+ H + ++I Y APEV
Sbjct: 172 V--HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TY 228
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
+K DV+S GV+L LL+G P
Sbjct: 229 DEKCDVWSTGVILYILLSGCPP 250
>pdb|3GU4|A Chain A, Crystal Structure Of Dapkq23v-Amppnp
pdb|3GU5|A Chain A, Crystal Structure Of Dapkq23v-Amppnp-Mg2+
pdb|3GU6|A Chain A, Crystal Structure Of Dapkq23v-Adp
pdb|3GU7|A Chain A, Crystal Structure Of Dapkq23v-Adp-Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGVFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2W4J|A Chain A, X-Ray Structure Of A Dap-Kinase 2-277
Length = 277
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2XZS|A Chain A, Death Associated Protein Kinase 1 Residues 1-312
pdb|2XZS|B Chain B, Death Associated Protein Kinase 1 Residues 1-312
Length = 312
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YAK|A Chain A, Structure Of Death-Associated Protein Kinase 1 (Dapk1) In
Complex With A Ruthenium Octasporine Ligand (Osv)
pdb|2Y4P|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|2Y4P|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain
pdb|3ZXT|A Chain A, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|B Chain B, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|C Chain C, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
pdb|3ZXT|D Chain D, Dimeric Structure Of Dapk-1 Catalytic Domain In Complex
With Amppcp-Mg
Length = 285
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3GU8|A Chain A, Crystal Structure Of Dapkl93g With N6-Cyclopentyladenosine
pdb|3GUB|A Chain A, Crystal Structure Of Dapkl93g Complexed With N6-(2-
Phenylethyl)adenosine
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILIGELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|1P4F|A Chain A, Death Associated Protein Kinase Catalytic Domain With
Bound Inhibitor Fragment
Length = 293
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 128
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 129 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|2XUU|A Chain A, Crystal Structure Of A Dap-Kinase 1 Mutant
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPAFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3ZZW|A Chain A, Crystal Structure Of The Kinase Domain Of Ror2
pdb|3ZZW|B Chain B, Crystal Structure Of The Kinase Domain Of Ror2
Length = 289
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 119/294 (40%), Gaps = 55/294 (18%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVTVS--EKEFREKMEVVGSMDHENL 374
E LG+ FG YK L E VA+K LKD +EFR + + + H N+
Sbjct: 15 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 74
Query: 375 VPLRAYYYSRDEKL-LVHDYMPMGSLSALL-----HGNRGAG------RTPLNWETRSGL 422
V L ++D+ L ++ Y G L L H + G+ ++ L L
Sbjct: 75 VCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 133
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL---------AHLASPSS 473
+ + YL S H ++ + N+L+ +ISD GL L S
Sbjct: 134 VAQIAAGMEYLSSHHVV--HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 191
Query: 474 TPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
P R + APE K S +D++S+GV+L E+ + G P N++ V++ R Q
Sbjct: 192 LPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 248
Query: 533 V-VKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 585
+ ++ A V+ L I C ++P RP ++ S++
Sbjct: 249 LPCPDDCPAWVY------------------ALMIECWNEFPSRRPRFKDIHSRL 284
>pdb|1WVW|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVX|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
pdb|1WVY|A Chain A, Crystal Structures Of Kinase Domain Of Dap Kinase In
Complex With Small Molecular Inhibitors
Length = 278
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|2YDJ|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
pdb|2YDJ|B Chain B, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4EXU|A Chain A, Mapk13, Inactive Form
pdb|4EYJ|A Chain A, Mapk13 Complex With Inhibitor
pdb|4EYM|A Chain A, Mapk13 Complex With Inhibitor
Length = 371
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVPLRA 379
+G G +G+ A + G VA+K+L SE + +RE + ++ M HEN++ L
Sbjct: 50 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLD 108
Query: 380 YYYSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ +D Y+ M + L G + E L + + Y+HS G
Sbjct: 109 VFTPASSLRNFYDFYLVMPFMQTDLQKIMG---MEFSEEKIQYLVYQMLKGLKYIHSAGV 165
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-GYRAPEVT-DARKVSQKA 496
H ++K N+ +++ E +I DFGLA A T + YRAPEV +Q
Sbjct: 166 V--HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV 223
Query: 497 DVYSFGVLLLELLTGK 512
D++S G ++ E+LTGK
Sbjct: 224 DIWSVGCIMAEMLTGK 239
>pdb|4FSZ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X0G|A Chain A, X-ray Structure Of A Dap-kinase Calmodulin Complex
Length = 334
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3MA6|A Chain A, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
pdb|3MA6|B Chain B, Crystal Structure Of Kinase Domain Of Tgcdpk1 In Presence
Of 3brb-Pp1
Length = 298
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 94/202 (46%), Gaps = 19/202 (9%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE----KMEVVGSMDHENLVPLR 378
VLGKG+FG ++ G AVK + V +K +E +++++ +DH N++ L
Sbjct: 39 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIMKLY 98
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
++ + LV + G L + + R L+ I Y+H
Sbjct: 99 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYMHKNKI 153
Query: 439 ANSHGNIKSSNILL-SKSYEA--RISDFGLA-HLASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K N+LL SKS +A RI DFGL+ H + ++I Y APEV
Sbjct: 154 V--HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKMKDKIGTAYYIAPEVLHG-TY 210
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
+K DV+S GV+L LL+G P
Sbjct: 211 DEKCDVWSTGVILYILLSGCPP 232
>pdb|3E7O|A Chain A, Crystal Structure Of Jnk2
pdb|3E7O|B Chain B, Crystal Structure Of Jnk2
Length = 360
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/203 (28%), Positives = 96/203 (47%), Gaps = 24/203 (11%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G A+ L GI VAVK+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 34 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRE-LVLLKCVNHKNIISLLNVF 90
Query: 382 YSRDEKLLVHD-YMPM----GSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+ D Y+ M +L ++H L+ E S L I +LHS
Sbjct: 91 TPQKTLEEFQDVYLVMELMDANLCQVIHME-------LDHERMSYLLYQMLCGIKHLHSA 143
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVS 493
G H ++K SNI++ +I DFGLA AS + TP + YRAPEV
Sbjct: 144 GII--HRDLKPSNIVVKSDCTLKILDFGLARTASTNFMMTPYVVTRYYRAPEVILGMGYK 201
Query: 494 QKADVYSFGVLLLELLTGKAPTQ 516
+ D++S G ++ EL+ G Q
Sbjct: 202 ENVDIWSVGCIMGELVKGSVIFQ 224
>pdb|4GT4|A Chain A, Structure Of Unliganded, Inactive Ror2 Kinase Domain
pdb|4GT4|B Chain B, Structure Of Unliganded, Inactive Ror2 Kinase Domain
Length = 308
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 119/294 (40%), Gaps = 55/294 (18%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVTVS--EKEFREKMEVVGSMDHENL 374
E LG+ FG YK L E VA+K LKD +EFR + + + H N+
Sbjct: 32 EELGEDRFGKVYKGHLFGPAPGEQTQAVAIKTLKDKAEGPLREEFRHEAMLRARLQHPNV 91
Query: 375 VPLRAYYYSRDEKL-LVHDYMPMGSLSALL-----HGNRGAG------RTPLNWETRSGL 422
V L ++D+ L ++ Y G L L H + G+ ++ L L
Sbjct: 92 VCLLGVV-TKDQPLSMIFSYCSHGDLHEFLVMRSPHSDVGSTDDDRTVKSALEPPDFVHL 150
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL---------AHLASPSS 473
+ + YL S H ++ + N+L+ +ISD GL L S
Sbjct: 151 VAQIAAGMEYLSSHHVV--HKDLATRNVLVYDKLNVKISDLGLFREVYAADYYKLLGNSL 208
Query: 474 TPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
P R + APE K S +D++S+GV+L E+ + G P N++ V++ R Q
Sbjct: 209 LPIR---WMAPEAIMYGKFSIDSDIWSYGVVLWEVFSYGLQPYCGYSNQDVVEMIRNRQV 265
Query: 533 V-VKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 585
+ ++ A V+ L I C ++P RP ++ S++
Sbjct: 266 LPCPDDCPAWVY------------------ALMIECWNEFPSRRPRFKDIHSRL 301
>pdb|3VUM|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M7 In Map
Kinase Jnk1
Length = 370
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/194 (29%), Positives = 94/194 (48%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVVAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKVVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDGY-RAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + Y RAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S GV++ E++ G
Sbjct: 208 IWSVGVIMGEMIKG 221
>pdb|3F5U|A Chain A, Crystal Structure Of The Death Associated Protein Kinase
In Complex With Amppnp And Mg2+
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3UTO|A Chain A, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
pdb|3UTO|B Chain B, Twitchin Kinase Region From C.Elegans
(Fn31-Nl-Kin-Crd-Ig26)
Length = 573
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 307 KGDRAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE-FREKME 364
K D D D+ E LG G FG ++ T G A K + S+KE R++++
Sbjct: 151 KHDHVLDHYDI----HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQ 206
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H LV L + +E ++++++M G L + +
Sbjct: 207 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--------------M 252
Query: 425 GASRAIAYLHS--KGPANSHGN------IKSSNILLS--KSYEARISDFGLAHLASPSST 474
A+ Y+ KG + H N +K NI+ + +S E ++ DFGL P +
Sbjct: 253 SEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 312
Query: 475 PNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
G + APEV + + V D++S GVL LL+G +P
Sbjct: 313 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 355
>pdb|1IG1|A Chain A, 1.8a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mn.
pdb|1JKL|A Chain A, 1.6a X-Ray Structure Of Binary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue
pdb|1JKS|A Chain A, 1.5a X-Ray Structure Of Apo Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|A Chain A, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKT|B Chain B, Tetragonal Crystal Form Of A Catalytic Domain Of
Death-Associated Protein Kinase
pdb|1JKK|A Chain A, 2.4a X-Ray Structure Of Ternary Complex Of A Catalytic
Domain Of Death-Associated Protein Kinase With Atp
Analogue And Mg.
pdb|3F5G|A Chain A, Crystal Structure Of Death Associated Protein Kinase In
Complex With Adp And Mg2+
pdb|3EH9|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Adp
pdb|3EHA|A Chain A, Crystal Structure Of Death Associated Protein Kinase
Complexed With Amppnp
Length = 294
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 14 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 73
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 74 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 128
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 129 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 186
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 187 IVNYEPLGLEADMWSIGVITYILLSGASP 215
>pdb|3DFC|B Chain B, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain With
Amppnp
pdb|3DGK|A Chain A, Crystal Structure Of A Glycine-Rich Loop Mutant Of The
Death Associated Protein Kinase Catalytic Domain
Length = 295
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGKFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3COI|A Chain A, Crystal Structure Of P38delta Kinase
Length = 353
Score = 56.6 bits (135), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 56/196 (28%), Positives = 91/196 (46%), Gaps = 14/196 (7%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVPLRA 379
+G G +G+ A + G VA+K+L SE + +RE + ++ M HEN++ L
Sbjct: 32 VGSGAYGSVCSAIDKRSGEKVAIKKLSRPFQSEIFAKRAYRELL-LLKHMQHENVIGLLD 90
Query: 380 YYYSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ +D Y+ M + L G + E L + + Y+HS G
Sbjct: 91 VFTPASSLRNFYDFYLVMPFMQTDLQKIMGLK---FSEEKIQYLVYQMLKGLKYIHSAGV 147
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-GYRAPEVT-DARKVSQKA 496
H ++K N+ +++ E +I DFGLA A T + YRAPEV +Q
Sbjct: 148 V--HRDLKPGNLAVNEDCELKILDFGLARHADAEMTGYVVTRWYRAPEVILSWMHYNQTV 205
Query: 497 DVYSFGVLLLELLTGK 512
D++S G ++ E+LTGK
Sbjct: 206 DIWSVGCIMAEMLTGK 221
>pdb|2YAC|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With
Nms-P937
pdb|4A4L|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
5-(2-Amino-Pyrimidin-4-Yl)-1h-Pyrrole Inhibitor
pdb|4A4O|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
2-
(2-Amino-Pyrimidin-4-Yl)-1,5,6,
7-Tetrahydro-Pyrrolopyridin- 4-One Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F ++ + + V A K + + + REKM + S+ H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P + LG YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN--R 137
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDARK 491
H ++K N+ L++ E +I DFGLA + TPN Y APEV +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN----YIAPEVLSKKG 193
Query: 492 VSQKADVYSFGVLLLELLTGKAPTQA 517
S + DV+S G ++ LL GK P +
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|1O6K|A Chain A, Structure Of Activated Form Of Pkb Kinase Domain S474d
With Gsk3 Peptide And Amp-Pnp
Length = 336
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K L K+V +++ E + V+ + H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L H +R T E R+ GA A+ Y
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARF-YGAEIVSALEY 120
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + +IK N++L K +I+DFGL A + TP Y AP
Sbjct: 121 LHSRDVV--YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE----YLAP 174
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|3GCP|A Chain A, Human P38 Map Kinase In Complex With Sb203580
pdb|3GCQ|A Chain A, Human P38 Map Kinase In Complex With Rl45
pdb|3GCS|A Chain A, Human P38 Map Kinase In Complex With Sorafenib
pdb|3GCV|A Chain A, Human P38 Map Kinase In Complex With Rl62
pdb|3HV3|A Chain A, Human P38 Map Kinase In Complex With Rl49
pdb|3IW5|A Chain A, Human P38 Map Kinase In Complex With An Indole Derivative
pdb|3IW6|A Chain A, Human P38 Map Kinase In Complex With A Benzylpiperazin-
Pyrrol
pdb|3IW7|A Chain A, Human P38 Map Kinase In Complex With An Imidazo-Pyridine
pdb|3IW8|A Chain A, Structure Of Inactive Human P38 Map Kinase In Complex With
A Thiazole-Urea
pdb|3HUB|A Chain A, Human P38 Map Kinase In Complex With Scios-469
pdb|3L8S|A Chain A, Human P38 Map Kinase In Complex With Cp-547632
pdb|3LFB|A Chain A, Human P38 Map Kinase In Complex With Rl98
pdb|3LFC|A Chain A, Human P38 Map Kinase In Complex With Rl99
pdb|3LFD|A Chain A, Human P38 Map Kinase In Complex With Rl113
pdb|3LFE|A Chain A, Human P38 Map Kinase In Complex With Rl116
pdb|3LFF|A Chain A, Human P38 Map Kinase In Complex With Rl166
pdb|3PG3|A Chain A, Human P38 Map Kinase In Complex With Rl182
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 94/203 (46%), Gaps = 25/203 (12%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
P R+ D L+ H MG+ N L + L R + Y
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGA-----DLNNIVKSQKLTDDHVQFLIYQILRGLKY 140
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DAR 490
+HS H ++K SN+ +++ E +I DFGL H + YRAPE+ +
Sbjct: 141 IHSADII--HRDLKPSNLAVNEDSELKILDFGLCRHTDDEMTGYVATRWYRAPEIMLNWM 198
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 199 HYNQTVDIWSVGCIMAELLTGRT 221
>pdb|4EON|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EON|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ M L + + G PL +S L + +A+ HS
Sbjct: 68 LLDVIHTENKLYLVFEFLSM-DLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 123
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 124 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 181
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1CM8|A Chain A, Phosphorylated Map Kinase P38-Gamma
pdb|1CM8|B Chain B, Phosphorylated Map Kinase P38-Gamma
Length = 367
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 92/202 (45%), Gaps = 25/202 (12%)
Query: 325 LGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVPLRA 379
+G G +G A G VA+K+L SE + +RE + ++ M HEN++ L
Sbjct: 33 VGSGAYGAVCSAVDGRTGAKVAIKKLYRPFQSELFAKRAYRE-LRLLKHMRHENVIGLLD 91
Query: 380 YYYSRDEKL-------LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ + DE L LV +M + H G R L + + Y
Sbjct: 92 VF-TPDETLDDFTDFYLVMPFMGTDLGKLMKHEKLGEDRIQF-------LVYQMLKGLRY 143
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-GYRAPEVT-DAR 490
+H+ G H ++K N+ +++ E +I DFGLA A + YRAPEV +
Sbjct: 144 IHAAGII--HRDLKPGNLAVNEDCELKILDFGLARQADSEMXGXVVTRWYRAPEVILNWM 201
Query: 491 KVSQKADVYSFGVLLLELLTGK 512
+ +Q D++S G ++ E++TGK
Sbjct: 202 RYTQTVDIWSVGCIMAEMITGK 223
>pdb|3KB7|A Chain A, Crystal Structure Of Polo-Like Kinase 1 In Complex With A
Pyrazoloquinazoline Inhibitor
Length = 311
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F ++ + + V A K + + + REKM + S+ H+++V
Sbjct: 25 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 84
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P + LG YLH
Sbjct: 85 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN--R 137
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDARK 491
H ++K N+ L++ E +I DFGLA + TPN Y APEV +
Sbjct: 138 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN----YIAPEVLSKKG 193
Query: 492 VSQKADVYSFGVLLLELLTGKAPTQA 517
S + DV+S G ++ LL GK P +
Sbjct: 194 HSFEVDVWSIGCIMYTLLVGKPPFET 219
>pdb|2DYL|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 7 Activated Mutant (S287d, T291d)
Length = 318
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 94/202 (46%), Gaps = 18/202 (8%)
Query: 325 LGKGTFGTAYKATL-EMGIVVAVKRLKDVTVSEKEFREKME---VVGSMDHENLVPLRAY 380
+G GT G +K + G V+AVK+++ E+ R M+ V+ S D +V
Sbjct: 33 MGSGTCGQVWKMRFRKTGHVIAVKQMRRSGNKEENKRILMDLDVVLKSHDCPYIVQCFGT 92
Query: 381 YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ + + + + M G+ + L R G P+ + + +A+ YL K
Sbjct: 93 FITNTDVFIAMELM--GTCAEKLK-KRMQG--PIPERILGKMTVAIVKALYYLKEKH-GV 146
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVSQ--- 494
H ++K SNILL + + ++ DFG++ +R G Y APE D ++
Sbjct: 147 IHRDVKPSNILLDERGQIKLCDFGISGRLVDDKAKDRSAGCAAYMAPERIDPPDPTKPDY 206
Query: 495 --KADVYSFGVLLLELLTGKAP 514
+ADV+S G+ L+EL TG+ P
Sbjct: 207 DIRADVWSLGISLVELATGQFP 228
>pdb|1UKH|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
pdb|1UKI|A Chain A, Structural Basis For The Selective Inhibition Of Jnk1 By
The Scaffolding Protein Jip1 And Sp600125
Length = 369
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|3E87|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E87|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E88|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|A Chain A, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3E8D|B Chain B, Crystal Structures Of The Kinase Domain Of Akt2 In Complex
With Atp- Competitive Inhibitors
pdb|3D0E|A Chain A, Crystal Structure Of Human Akt2 In Complex With Gsk690693
pdb|3D0E|B Chain B, Crystal Structure Of Human Akt2 In Complex With Gsk690693
Length = 335
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 62/210 (29%), Positives = 95/210 (45%), Gaps = 34/210 (16%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K L K+V +++ E + V+ + H L
Sbjct: 11 KLLGKGTFGKVILVREKAT---GRYYAMKILRKEVIIAKDEVAHTVTESRVLQNTRHPFL 67
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L H +R T E R+ GA A+ Y
Sbjct: 68 TALKYAFQTHDRLCFVMEYANGGEL--FFHLSRERVFT----EERARF-YGAEIVSALEY 120
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + +IK N++L K +I+DFGL A + TP Y AP
Sbjct: 121 LHSRDVV--YRDIKLENLMLDKDGHIKITDFGLCKEGISDGATMKXFCGTPE----YLAP 174
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 175 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 204
>pdb|4EOM|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
pdb|4EOM|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, Q131e - Human
Cyclin A3 Complex With Atp
Length = 301
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ M L + + G PL +S L + +A+ HS
Sbjct: 70 LLDVIHTENKLYLVFEFLSM-DLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 125
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 126 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRA 205
>pdb|2XRW|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 371
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 37 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 93
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 94 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 149
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 150 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 208
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 209 IWSVGCIMGEMIKG 222
>pdb|3VUG|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|3MH2|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8U|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 99/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I D+GLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDYGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|1ZYS|A Chain A, Co-Crystal Structure Of Checkpoint Kinase Chk1 With A
Pyrrolo-Pyridine Inhibitor
Length = 273
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINAMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|4EOK|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOK|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Nu6102
pdb|4EOL|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
pdb|4EOL|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With The Inhibitor Ro3306
Length = 300
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 10 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 68
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ M L + + G PL +S L + +A+ HS
Sbjct: 69 LLDVIHTENKLYLVFEFLSM-DLKDFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 124
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 125 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 182
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 183 YSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2W4K|A Chain A, X-Ray Structure Of A Dap-Kinase 2-302
Length = 302
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 54/209 (25%), Positives = 92/209 (44%), Gaps = 22/209 (10%)
Query: 321 SAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHE 372
+ E LG G F K + G+ A K +K VS ++ ++ ++ + H
Sbjct: 15 TGEELGSGQFAVVKKCREKSTGLQYAAKFIKKRRTKSSRRGVSREDIEREVSILKEIQHP 74
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L Y ++ + +L+ + + G L L A + L E + + Y
Sbjct: 75 NVITLHEVYENKTDVILILELVAGGELFDFL-----AEKESLTEEEATEFLKQILNGVYY 129
Query: 433 LHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPE 485
LHS A H ++K NI+L +I DFGLAH + I G + APE
Sbjct: 130 LHSLQIA--HFDLKPENIMLLDRNVPKPRIKIIDFGLAHKIDFGNEFKNIFGTPEFVAPE 187
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ + + +AD++S GV+ LL+G +P
Sbjct: 188 IVNYEPLGLEADMWSIGVITYILLSGASP 216
>pdb|3TT0|A Chain A, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
pdb|3TT0|B Chain B, Co-Structure Of Fibroblast Growth Factor Receptor 1 Kinase
Domain With
3-(2,6-Dichloro-3,
5-Dimethoxy-Phenyl)-1-{6-[4-(4-Ethyl-Piperazin-1-
Yl)-Phenylamino]-Pyrimidin-4-Yl}-1-Methyl-Urea (Bgj398)
Length = 382
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 124/297 (41%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 77 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 133
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 134 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 192
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 193 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 250
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L +
Sbjct: 251 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKLLKEGH 310
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+ K N E+ +++ +C P RP+ ++ ++ I
Sbjct: 311 RMDKP--------------SNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 350
>pdb|1KOA|A Chain A, Twitchin Kinase Fragment (C.Elegans), Autoregulated
Protein Kinase And Immunoglobulin Domains
Length = 491
Score = 56.2 bits (134), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 95/223 (42%), Gaps = 33/223 (14%)
Query: 307 KGDRAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE-FREKME 364
K D D D+ E LG G FG ++ T G A K + S+KE R++++
Sbjct: 45 KHDHVLDHYDI----HEELGTGAFGVVHRVTERATGNNFAAKFVMTPHESDKETVRKEIQ 100
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ + H LV L + +E ++++++M G L + +
Sbjct: 101 TMSVLRHPTLVNLHDAFEDDNEMVMIYEFMSGGELFEKVADEHNK--------------M 146
Query: 425 GASRAIAYLHS--KGPANSHGN------IKSSNILLS--KSYEARISDFGLAHLASPSST 474
A+ Y+ KG + H N +K NI+ + +S E ++ DFGL P +
Sbjct: 147 SEDEAVEYMRQVCKGLCHMHENNYVHLDLKPENIMFTTKRSNELKLIDFGLTAHLDPKQS 206
Query: 475 PNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
G + APEV + + V D++S GVL LL+G +P
Sbjct: 207 VKVTTGTAEFAAPEVAEGKPVGYYTDMWSVGVLSYILLSGLSP 249
>pdb|4FSY|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEIXINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2V5Q|A Chain A, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
pdb|2V5Q|B Chain B, Crystal Structure Of Wild-type Plk-1 Kinase Domain In
Complex With A Selective Darpin
Length = 315
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 58/206 (28%), Positives = 88/206 (42%), Gaps = 24/206 (11%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F ++ + + V A K + + + REKM + S+ H+++V
Sbjct: 29 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 88
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P + LG YLH
Sbjct: 89 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN--R 141
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDARK 491
H ++K N+ L++ E +I DFGLA + TPN Y APEV +
Sbjct: 142 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKTLCGTPN----YIAPEVLSKKG 197
Query: 492 VSQKADVYSFGVLLLELLTGKAPTQA 517
S + DV+S G ++ LL GK P +
Sbjct: 198 HSFEVDVWSIGCIMYTLLVGKPPFET 223
>pdb|2AC3|A Chain A, Structure Of Human Mnk2 Kinase Domain
Length = 316
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 59/223 (26%), Positives = 93/223 (41%), Gaps = 29/223 (13%)
Query: 314 LEDLLRASAEVLGKGTFG---TAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
ED+ + +VLG+G T V + + + + FRE +
Sbjct: 10 FEDVYQLQEDVLGEGAHARVQTCINLITSQEYAVKIIEKQPGHIRSRVFREVEMLYQCQG 69
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
H N++ L ++ D LV + M GS+ + +H R N S + + A+
Sbjct: 70 HRNVLELIEFFEEEDRFYLVFEKMRGGSILSHIHKRRH-----FNELEASVVVQDVASAL 124
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYE---ARISDFGLAH------LASPSSTPNRIDG- 480
+LH+KG A H ++K NIL + +I DF L SP STP +
Sbjct: 125 DFLHNKGIA--HRDLKPENILCEHPNQVSPVKICDFDLGSGIKLNGDCSPISTPELLTPC 182
Query: 481 ----YRAPEVTDARK-----VSQKADVYSFGVLLLELLTGKAP 514
Y APEV +A ++ D++S GV+L LL+G P
Sbjct: 183 GSAEYMAPEVVEAFSEEASIYDKRCDLWSLGVILYILLSGYPP 225
>pdb|3VUD|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M1 In Map
Kinase Jnk1
Length = 370
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|4EOJ|A Chain A, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
pdb|4EOJ|C Chain C, Thr 160 Phosphorylated Cdk2 H84s, Q85m, K89d - Human
Cyclin A3 Complex With Atp
Length = 302
Score = 56.2 bits (134), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 101/202 (50%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ M L + + G PL +S L + +A+ HS
Sbjct: 70 LLDVIHTENKLYLVFEFLSM-DLKDFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 125
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4FST|A Chain A, Crystal Structure Of The Chk1
Length = 269
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3GQL|A Chain A, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|B Chain B, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
pdb|3GQL|C Chain C, Crystal Structure Of Activated Receptor Tyrosine Kinase In
Complex With Substrates
Length = 326
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 36 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 92
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 151
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 152 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 264
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 265 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2RKU|A Chain A, Structure Of Plk1 In Complex With Bi2536
Length = 294
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F ++ + + V A K + + + REKM + S+ H+++V
Sbjct: 23 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 82
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P + LG YLH
Sbjct: 83 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN--R 135
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI----DGYRAPEVTDARKVSQK 495
H ++K N+ L++ E +I DFGLA ++ Y APEV + S +
Sbjct: 136 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 195
Query: 496 ADVYSFGVLLLELLTGKAPTQA 517
DV+S G ++ LL GK P +
Sbjct: 196 VDVWSIGCIMYTLLVGKPPFET 217
>pdb|4FVR|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain Mutant
V617f (Mg- Atp-Bound Form)
Length = 289
Score = 55.8 bits (133), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 112/291 (38%), Gaps = 48/291 (16%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL----------EMGIVVAVKRLKDVTVSEKEFREKME 364
EDL+ E LG+GTF +K E +++ V SE F E
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES-FFEAAS 64
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
++ + H++LV + DE +LV +++ GSL L N+ E LA
Sbjct: 65 MMSKLSHKHLVLNYGVCFCGDENILVQEFVKFGSLDTYLKKNKNCINILWKLEVAKQLAW 124
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASP----SSTPNRIDG 480
A+ +L HGN+ + NILL + + + + L+ P + P I
Sbjct: 125 ----AMHFLEENTLI--HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 481 YRAPEV-----TDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVV 534
R P V + + ++ D +SFG L E+ + G P AL D R +Q
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL------DSQRKLQFYE 232
Query: 535 KEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 585
R+Q + +L L NC PD+RPS + +
Sbjct: 233 D-------------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|4FSW|A Chain A, Crystal Structure Of The Chk1
pdb|4FTA|A Chain A, Crystal Structure Of The Chk1
pdb|4FTC|A Chain A, Crystal Structure Of The Chk1
pdb|4FTN|A Chain A, Crystal Structure Of The Chk1
pdb|4FTQ|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3JVR|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
pdb|3JVS|A Chain A, Characterization Of The Chk1 Allosteric Inhibitor Binding
Site
Length = 271
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2AYP|A Chain A, Crystal Structure Of Chk1 With An Indol Inhibitor
Length = 269
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3C4F|A Chain A, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
pdb|3C4F|B Chain B, Fgfr Tyrosine Kinase Domain In Complex With 3-(3-
Methoxybenzyl)-7-Azaindole
Length = 302
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 21 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 77
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 78 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYCYNPSHNPEEQLSSKD 136
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 137 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 194
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 195 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 249
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 250 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 294
>pdb|3VUH|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M3 In Map
Kinase Jnk1
Length = 370
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|2E9V|A Chain A, Structure Of H-Chk1 Complexed With A859017
pdb|2E9V|B Chain B, Structure Of H-Chk1 Complexed With A859017
Length = 268
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|1YRP|A Chain A, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
pdb|1YRP|B Chain B, Catalytic Domain Of Human Zip Kinase Phosphorylated At
Thr265
Length = 278
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 98/220 (44%), Gaps = 23/220 (10%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFRE 361
R D+ED E LG G F K + G A K +K VS +E
Sbjct: 6 RQEDVEDHYEMGEE-LGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIER 64
Query: 362 KMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSG 421
++ ++ + H N++ L + ++ + +L+ + + G L L A + L + +
Sbjct: 65 EVNILREIRHPNIITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQ 119
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNR 477
+ YLHSK A H ++K NI LL K+ ++ DFG+AH +
Sbjct: 120 FLKQILDGVHYLHSKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKN 177
Query: 478 IDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
I G + APE+ + + +AD++S GV+ LL+G +P
Sbjct: 178 IFGTPEFVAPEIVNYEPLGLEADMWSIGVITYILLSGASP 217
>pdb|1LEW|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Nuclear Substrate Mef2a
pdb|1LEZ|A Chain A, Crystal Structure Of Map Kinase P38 Complexed To The
Docking Site On Its Activator Mkk3b
Length = 360
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2OU7|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|2OWB|A Chain A, Structure Of The Catalytic Domain Of Human Polo-Like
Kinase 1
pdb|3FC2|A Chain A, Plk1 In Complex With Bi6727
Length = 335
Score = 55.8 bits (133), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F ++ + + V A K + + + REKM + S+ H+++V
Sbjct: 49 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 108
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P + LG YLH
Sbjct: 109 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN--R 161
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI----DGYRAPEVTDARKVSQK 495
H ++K N+ L++ E +I DFGLA ++ Y APEV + S +
Sbjct: 162 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 221
Query: 496 ADVYSFGVLLLELLTGKAPTQA 517
DV+S G ++ LL GK P +
Sbjct: 222 VDVWSIGCIMYTLLVGKPPFET 243
>pdb|2YJR|A Chain A, Structure Of F1174l Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 120/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 85
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ ++H+N+V + ++ + M G L + L R
Sbjct: 86 VCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 145
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 206 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 265 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 307
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 308 AIILERIE 315
>pdb|2YFX|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase In
Complex With Crizotinib
Length = 327
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 70
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 71 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 130
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 191 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 250 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 292
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 293 AIILERIE 300
>pdb|3P4K|A Chain A, The Third Conformation Of P38a Map Kinase Observed In
Phosphorylated P38a And In Solution
Length = 370
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 40 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 98
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 99 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 149
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 150 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 207
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 208 MHYNQTVDIWSVGCIMAELLTGR 230
>pdb|2GHG|A Chain A, H-Chk1 Complexed With A431994
pdb|2YWP|A Chain A, Crystal Structure Of Chk1 With A Urea Inhibitor
pdb|2E9N|A Chain A, Structure Of H-chk1 Complexed With A767085
pdb|2E9O|A Chain A, Structure Of H-Chk1 Complexed With Aa582939
pdb|2E9P|A Chain A, Structure Of H-Chk1 Complexed With A771129
pdb|2E9U|A Chain A, Structure Of H-Chk1 Complexed With A780125
Length = 269
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2YHV|A Chain A, Structure Of L1196m Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 85
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 86 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILMELMAGGDLKSFLRETRPR 145
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 206 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 265 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 307
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 308 AIILERIE 315
>pdb|3OT3|A Chain A, X-Ray Crystal Structure Of Compound 22k Bound To Human
Chk1 Kinase Domain
pdb|3OT8|A Chain A, X-Ray Crystal Structure Of Compound 17r Bound To Human
Chk1 Kinase Domain
pdb|3PA3|A Chain A, X-Ray Crystal Structure Of Compound 70 Bound To Human Chk1
Kinase Domain
pdb|3PA4|A Chain A, X-Ray Crystal Structure Of Compound 2a Bound To Human Chk1
Kinase Domain
pdb|3PA5|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
pdb|3U9N|A Chain A, X-Ray Crystal Structure Of Compound 1 Bound To Human Chk1
Kinase Domain
Length = 273
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2X8E|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YER|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YEX|A Chain A, Synthesis And Evaluation Of Triazolones As Checkpoint
Kinase 1 Inhibitors
pdb|2YDK|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 276
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2R9S|A Chain A, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
pdb|2R9S|B Chain B, C-Jun N-Terminal Kinase 3 With 3,5-Disubstituted Quinoline
Inhibitor
Length = 356
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 85
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 86 TPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQMLXGIKHLHSAGII- 141
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 142 -HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 200
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 201 IWSVGCIMGEMVRHK 215
>pdb|2GTM|A Chain A, Mutated Mouse P38 Map Kinase Domain In Complex With
Inhibitor Pg-892579
pdb|2GTN|A Chain A, Mutated Map Kinase P38 (mus Musculus) In Complex With
Inhbitor Pg-951717
Length = 348
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 85 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 135
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 136 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 193
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|4FT3|A Chain A, Crystal Structure Of The Chk1
pdb|4GH2|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMXGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2XB7|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Nvp- Tae684
pdb|2XBA|A Chain A, Structure Of Human Anaplastic Lymphoma Kinase In Complex
With Pha-E429
Length = 315
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 3 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 62
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 63 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 122
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 123 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 182
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 183 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 241
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 242 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 284
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 285 AIILERIE 292
>pdb|4FSM|A Chain A, Crystal Structure Of The Chk1
pdb|4FSQ|A Chain A, Crystal Structure Of The Chk1
pdb|4FSR|A Chain A, Crystal Structure Of The Chk1
pdb|4FT0|A Chain A, Crystal Structure Of The Chk1
pdb|4FT5|A Chain A, Crystal Structure Of The Chk1
pdb|4FT7|A Chain A, Crystal Structure Of The Chk1
pdb|4FT9|A Chain A, Crystal Structure Of The Chk1
pdb|4FTI|A Chain A, Crystal Structure Of The Chk1
pdb|4FTJ|A Chain A, Crystal Structure Of The Chk1
pdb|4FTK|A Chain A, Crystal Structure Of The Chk1
pdb|4FTL|A Chain A, Crystal Structure Of The Chk1
pdb|4FTM|A Chain A, Crystal Structure Of The Chk1
pdb|4FTO|A Chain A, Crystal Structure Of The Chk1
pdb|4FTR|A Chain A, Crystal Structure Of The Chk1
pdb|4FTT|A Chain A, Crystal Structure Of The Chk1
pdb|4FTU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|3QUP|A Chain A, Inhibitor Bound Structure Of The Kinase Domain Of The
Murine Receptor Tyrosine Kinase Tyro3 (Sky)
Length = 323
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 75/307 (24%), Positives = 130/307 (42%), Gaps = 57/307 (18%)
Query: 314 LEDLLRASAE-----VLGKGTFGTAYKATLEMG----IVVAVKRLK-DVTVSE--KEFRE 361
LED+L + +LGKG FG+ +A L+ + VAVK LK D+ S +EF
Sbjct: 15 LEDVLIPEQQFTLGRMLGKGEFGSVREAQLKQEDGSFVKVAVKMLKADIIASSDIEEFLR 74
Query: 362 KMEVVGSMDHENL-----VPLRAYYYSR-DEKLLVHDYMPMGSLSALLHGNRGAGRTPLN 415
+ + DH ++ V LR+ R +++ +M G L A L +R G P N
Sbjct: 75 EAACMKEFDHPHVAKLVGVSLRSRAKGRLPIPMVILPFMKHGDLHAFLLASR-IGENPFN 133
Query: 416 W--ETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA------- 466
+T + + + YL S+ H ++ + N +L++ ++DFGL+
Sbjct: 134 LPLQTLVRFMVDIACGMEYLSSRN--FIHRDLAARNCMLAEDMTVCVADFGLSRKIYSGD 191
Query: 467 --HLASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEG 523
S P + + A E + +DV++FGV + E++T G+ P + N
Sbjct: 192 YYRQGCASKLPVK---WLALESLADNLYTVHSDVWAFGVTMWEIMTRGQTPYAGIEN--- 245
Query: 524 VDLPRWVQSVVKEEWTAEVFDLEL--LRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEV 581
AE+++ + R + E M ++ L C + P RPS +
Sbjct: 246 ----------------AEIYNYLIGGNRLKQPPECMEEVYDLMYQCWSADPKQRPSFTCL 289
Query: 582 TSQIEEI 588
++E I
Sbjct: 290 RMELENI 296
>pdb|3THB|A Chain A, Structure Of Plk1 Kinase Domain In Complex With A
Benzolactam-Derived Inhibitor
Length = 333
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 86/202 (42%), Gaps = 16/202 (7%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F ++ + + V A K + + + REKM + S+ H+++V
Sbjct: 47 LGKGGFAKCFEISDADTKEVFAGKIVPKSLLLKPHQREKMSMEISIHRSLAHQHVVGFHG 106
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P + LG YLH
Sbjct: 107 FFEDNDFVFVVLELCRRRSLLEL-HKRRKALTEPEARYYLRQIVLGCQ----YLHRN--R 159
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI----DGYRAPEVTDARKVSQK 495
H ++K N+ L++ E +I DFGLA ++ Y APEV + S +
Sbjct: 160 VIHRDLKLGNLFLNEDLEVKIGDFGLATKVEYDGERKKVLCGTPNYIAPEVLSKKGHSFE 219
Query: 496 ADVYSFGVLLLELLTGKAPTQA 517
DV+S G ++ LL GK P +
Sbjct: 220 VDVWSIGCIMYTLLVGKPPFET 241
>pdb|3TG1|A Chain A, Crystal Structure Of P38alpha In Complex With A Mapk
Docking Partner
Length = 380
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 109 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 159
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 160 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 217
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 218 MHYNQTVDIWSVGCIMAELLTGR 240
>pdb|3EKK|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
pdb|3EKN|A Chain A, Insulin Receptor Kinase Complexed With An Inhibitor
Length = 307
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 51/297 (17%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 26 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 85
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 86 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 145
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR--------- 482
YL++K H N+ + N +++ + +I DFG+ + D YR
Sbjct: 146 YLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLPV 197
Query: 483 ---APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEW 538
APE + +D++SFGV+L E+ + + P Q L NE+ V+K
Sbjct: 198 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ----------VLKFVM 247
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
D + N E + L+++ C P+ RP+ E+ + +++ S +
Sbjct: 248 DGGYLD----QPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHPSFPE 297
>pdb|4FSN|A Chain A, Crystal Structure Of The Chk1
Length = 278
Score = 55.5 bits (132), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 10 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 69
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 70 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 123
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 124 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 182
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 183 HAEPVDVWSCGIVLTAMLAGELP 205
>pdb|4DN5|A Chain A, Crystal Structure Of Nf-kb-inducing Kinase (nik)
pdb|4DN5|B Chain B, Crystal Structure Of Nf-kb-inducing Kinase (nik)
Length = 356
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAYYY 382
LG+G+FG ++ + G AVK+ V + FR E++ + +VPL Y
Sbjct: 82 LGRGSFGEVHRMEDKQTGFQCAVKK-----VRLEVFRAEELMACAGLTSPRIVPL---YG 133
Query: 383 SRDEKLLVHDYMPM---GSLSALLHGNRGAGRTPLNWETRSGLALG-ASRAIAYLHSKGP 438
+ E V+ +M + GSL L+ + G P E R+ LG A + YLHS+
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLV---KEQGCLP---EDRALYYLGQALEGLEYLHSR-- 185
Query: 439 ANSHGNIKSSNILLSKS-YEARISDFGLAHLASPSS------TPNRIDG---YRAPEVTD 488
HG++K+ N+LLS A + DFG A P T + I G + APEV
Sbjct: 186 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKDLLTGDYIPGTETHMAPEVVL 245
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
R K DV+S ++L +L G P
Sbjct: 246 GRSCDAKVDVWSSCCMMLHMLNGCHP 271
>pdb|3V8S|A Chain A, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|B Chain B, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|C Chain C, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3V8S|D Chain D, Human Rho-Associated Protein Kinase 1 (Rock 1) In Complex
With Indazole Derivative (Compound 18)
pdb|3TV7|A Chain A, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|B Chain B, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|C Chain C, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TV7|D Chain D, Human Rho-associated Protein Kinase 1 (rock 1) In Complex
With Rki1342
pdb|3TWJ|A Chain A, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|B Chain B, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|C Chain C, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
pdb|3TWJ|D Chain D, Rho-Associated Protein Kinase 1 (Rock 1) In Complex With
Rki1447
Length = 410
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 40/226 (17%)
Query: 318 LRASAE------VLGKGTFGTA----YKATLEMGIVVAVKRLKDVTVSEKEF-REKMEVV 366
LR AE V+G+G FG +K+T ++ + + + + + S+ F E+ +++
Sbjct: 64 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 123
Query: 367 GSMDHENLVPLRAYYYSRDEKLL--VHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ +V L +Y +D++ L V +YMP G L L+ + + LAL
Sbjct: 124 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 181
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDF---------GLAHLASPSSTP 475
A ++ ++H ++K N+LL KS +++DF G+ + TP
Sbjct: 182 DAIHSMGFIHR--------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 233
Query: 476 NRIDGYRAPEVTDAR----KVSQKADVYSFGVLLLELLTGKAPTQA 517
+ Y +PEV ++ ++ D +S GV L E+L G P A
Sbjct: 234 D----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 275
>pdb|4F63|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F63|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 1
pdb|4F64|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F64|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 6
pdb|4F65|A Chain A, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
pdb|4F65|B Chain B, Crystal Structure Of Human Fibroblast Growth Factor
Receptor 1 Kinase Domain In Complex With Compound 8
Length = 309
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 28 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 84
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 85 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 143
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 144 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 201
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 202 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 256
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 257 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 301
>pdb|1BMK|A Chain A, The Complex Structure Of The Map Kinase P38SB218655
pdb|1P38|A Chain A, The Structure Of The Map Kinase P38 At 2.1 Angstoms
Resolution
Length = 379
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 49 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 107
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 108 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 158
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 159 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 216
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 217 MHYNQTVDIWSVGCIMAELLTGR 239
>pdb|2V55|A Chain A, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
pdb|2V55|C Chain C, Mechanism Of Multi-site Phosphorylation From A Rock-i:rhoe
Complex Structure
Length = 406
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 40/226 (17%)
Query: 318 LRASAE------VLGKGTFGTA----YKATLEMGIVVAVKRLKDVTVSEKEF-REKMEVV 366
LR AE V+G+G FG +K+T ++ + + + + + S+ F E+ +++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 367 GSMDHENLVPLRAYYYSRDEKLL--VHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ +V L +Y +D++ L V +YMP G L L+ + + LAL
Sbjct: 129 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDF---------GLAHLASPSSTP 475
A ++ ++H ++K N+LL KS +++DF G+ + TP
Sbjct: 187 DAIHSMGFIHR--------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 476 NRIDGYRAPEVTDAR----KVSQKADVYSFGVLLLELLTGKAPTQA 517
+ Y +PEV ++ ++ D +S GV L E+L G P A
Sbjct: 239 D----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|1YWR|A Chain A, Crystal Structure Analysis Of Inactive P38 Kinase Domain
In Complex With A Monocyclic Pyrazolone Inhibitor
Length = 360
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|2BDW|A Chain A, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
pdb|2BDW|B Chain B, Crystal Structure Of The Auto-Inhibited Kinase Domain Of
CalciumCALMODULIN ACTIVATED KINASE II
Length = 362
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVPLR 378
E LGKG F + + G+ A K + +S ++F++ + + + H N+V L
Sbjct: 35 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 94
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
LV D + G L + R + S +IAY HS G
Sbjct: 95 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNGI 149
Query: 439 ANSHGNIKSSNILLS---KSYEARISDFGLAHLASPSS-------TPNRIDGYRAPEVTD 488
H N+K N+LL+ K +++DFGLA + S TP GY +PEV
Sbjct: 150 V--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP----GYLSPEVLK 203
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
S+ D+++ GV+L LL G P
Sbjct: 204 KDPYSKPVDIWACGVILYILLVGYPP 229
>pdb|3KVX|A Chain A, Jnk3 Bound To Aminopyrimidine Inhibitor, Sr-3562
Length = 364
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQMLXGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|3VUK|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M5 In Map
Kinase Jnk1
Length = 370
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKVVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLVGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|2BR1|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRB|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRG|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRH|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRM|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRN|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2BRO|A Chain A, Structure-Based Design Of Novel Chk1 Inhibitors: Insights
Into Hydrogen Bonding And Protein-Ligand Affinity
pdb|2C3J|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3K|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2C3L|A Chain A, Identification Of A Buried Pocket For Potent And Selective
Inhibition Of Chk1: Prediction And Verification
pdb|2CGU|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGV|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGW|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|2CGX|A Chain A, Identification Of Chemically Diverse Chk1 Inhibitors By
Receptor-Based Virtual Screening
pdb|3NLB|A Chain A, Novel Kinase Profile Highlights The Temporal Basis Of
Context Dependent Checkpoint Pathways To Cell Death
Length = 297
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|1IA8|A Chain A, The 1.7 A Crystal Structure Of Human Cell Cycle Checkpoint
Kinase Chk1
pdb|1NVQ|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1UCN-01
pdb|1NVR|A Chain A, The Complex Structure Of Checkpoint Kinase
Chk1STAUROSPORINE
pdb|1NVS|A Chain A, The Complex Structure Of Checkpoint Kinase Chk1SB218078
pdb|2WMQ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMR|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMS|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMT|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMU|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMV|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMX|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2WMW|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEY|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XF0|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2XEZ|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2X8D|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2X8I|A Chain A, Discovery Of A Novel Class Of Triazolones As Checkpoint
Kinase Inhibitors - Hit To Lead Exploration
pdb|2YM3|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM4|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM5|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM6|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM7|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YM8|A Chain A, Crystal Structure Of Checkpoint Kinase 1 (Chk1) In Complex
With Inhibitors
pdb|2YDI|A Chain A, Discovery Of Checkpoint Kinase Inhibitor Azd7762 By
Structure Based Design And Optimization Of Thiophene
Carboxamide Ureas
Length = 289
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|3MDY|A Chain A, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
pdb|3MDY|C Chain C, Crystal Structure Of The Cytoplasmic Domain Of The Bone
Morp Protein Receptor Type-1b (Bmpr1b) In Complex With
Fkbp12 An 193189
Length = 337
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 78/298 (26%), Positives = 127/298 (42%), Gaps = 41/298 (13%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPLRAYYY 382
+GKG +G + G VAVK T E + + E+ + M HEN++ A
Sbjct: 45 IGKGRYGEVWMGKWR-GEKVAVKVF--FTTEEASWFRETEIYQTVLMRHENILGFIAADI 101
Query: 383 ----SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK-- 436
S + L+ DY GSL L T L+ ++ LA + + +LH++
Sbjct: 102 KGTGSWTQLYLITDYHENGSLYDYLKS------TTLDAKSMLKLAYSSVSGLCHLHTEIF 155
Query: 437 ----GPANSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAP 484
PA +H ++KS NIL+ K+ I+D GLA + P +T Y P
Sbjct: 156 STQGKPAIAHRDLKSKNILVKKNGTCCIADLGLAVKFISDTNEVDIPPNTRVGTKRYMPP 215
Query: 485 EVTDA---RKVSQK---ADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEW 538
EV D R Q AD+YSFG++L E + + + ++ E + V S E
Sbjct: 216 EVLDESLNRNHFQSYIMADMYSFGLILWE-VARRCVSGGIVEEYQLPYHDLVPSDPSYED 274
Query: 539 TAEVFDLELLR-----YQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
E+ ++ LR + +E + Q+ +L C A P +R + V + ++ S
Sbjct: 275 MREIVCIKKLRPSFPNRWSSDECLRQMGKLMTECWAHNPASRLTALRVKKTLAKMSES 332
>pdb|3JS2|A Chain A, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3JS2|B Chain B, Crystal Structure Of Minimal Kinase Domain Of Fibroblast
Growth Factor Receptor 1 In Complex With 5-(2-Thienyl)
Nicotinic Acid
pdb|3KY2|A Chain A, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
pdb|3KY2|B Chain B, Crystal Structure Of Fibroblast Growth Factor Receptor 1
Kinase Domain
Length = 317
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 36 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 92
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 151
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 152 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 264
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 265 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|2PUU|A Chain A, Crystal Structure Of P38 Complex With 1-(5-Tert-Butyl-2-P-
Tolyl-2h-Pyrazol-3-Yl)-3-[4-(6-Morpholin-4-Ylmethyl-
Pyridin-3-Yl)naphthalen-1-Yl]urea
pdb|3CTQ|A Chain A, Structure Of Map Kinase P38 In Complex With A
1-O-Tolyl-1,2, 3-Triazole-4-Carboxamide
Length = 348
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 56/202 (27%), Positives = 94/202 (46%), Gaps = 25/202 (12%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
P R+ D L+ H MG+ N L + L R + Y
Sbjct: 85 VFTPARSLEEFNDVYLVTH---LMGA-----DLNNIVKCAKLTDDHVQFLIYQILRGLKY 136
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DAR 490
+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 137 IHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWM 194
Query: 491 KVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 195 HYNQTVDIWSVGCIMAELLTGR 216
>pdb|1ZLT|A Chain A, Crystal Structure Of Chk1 Complexed With A Hymenaldisine
Analog
pdb|2GDO|A Chain A, 4-(aminoalkylamino)-3-benzimidazole-quinolinones As Potent
Chk1 Inhibitors
Length = 295
Score = 55.5 bits (132), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2ESM|A Chain A, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ESM|B Chain B, Crystal Structure Of Rock 1 Bound To Fasudil
pdb|2ETK|A Chain A, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETK|B Chain B, Crystal Structure Of Rock 1 Bound To Hydroxyfasudil
pdb|2ETR|A Chain A, Crystal Structure Of Rock I Bound To Y-27632
pdb|2ETR|B Chain B, Crystal Structure Of Rock I Bound To Y-27632
pdb|3D9V|A Chain A, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3D9V|B Chain B, Crystal Structure Of Rock I Bound To H-1152p A Di-
Methylated Variant Of Fasudil
pdb|3NCZ|A Chain A, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|B Chain B, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|C Chain C, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NCZ|D Chain D, X-Ray Co-Structure Of Rho-Associated Protein Kinase
(Rock1) With A Potent 2h-Isoquinolin-1-One Inhibitor
pdb|3NDM|A Chain A, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|B Chain B, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|C Chain C, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
pdb|3NDM|D Chain D, Crystal Structure Of Rho-Associated Protein Kinase (Rock1)
With A Potent Isoquinolone Derivative
Length = 415
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 102/226 (45%), Gaps = 40/226 (17%)
Query: 318 LRASAE------VLGKGTFGTA----YKATLEMGIVVAVKRLKDVTVSEKEF-REKMEVV 366
LR AE V+G+G FG +K+T ++ + + + + + S+ F E+ +++
Sbjct: 69 LRMKAEDYEVVKVIGRGAFGEVQLVRHKSTRKVYAMKLLSKFEMIKRSDSAFFWEERDIM 128
Query: 367 GSMDHENLVPLRAYYYSRDEKLL--VHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ +V L +Y +D++ L V +YMP G L L+ + + LAL
Sbjct: 129 AFANSPWVVQL--FYAFQDDRYLYMVMEYMPGGDLVNLMSNYDVPEKWARFYTAEVVLAL 186
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDF---------GLAHLASPSSTP 475
A ++ ++H ++K N+LL KS +++DF G+ + TP
Sbjct: 187 DAIHSMGFIHR--------DVKPDNMLLDKSGHLKLADFGTCMKMNKEGMVRCDTAVGTP 238
Query: 476 NRIDGYRAPEVTDAR----KVSQKADVYSFGVLLLELLTGKAPTQA 517
+ Y +PEV ++ ++ D +S GV L E+L G P A
Sbjct: 239 D----YISPEVLKSQGGDGYYGRECDWWSVGVFLYEMLVGDTPFYA 280
>pdb|3KK8|A Chain A, Camkii Substrate Complex A
Length = 284
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVPLR 378
E LGKG F + + G+ A K + +S ++F++ + + + H N+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
LV D + G L + R + S +IAY HS G
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 439 ANSHGNIKSSNILLS---KSYEARISDFGLAHLASPSS-------TPNRIDGYRAPEVTD 488
H N+K N+LL+ K +++DFGLA + S TP GY +PEV
Sbjct: 127 V--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP----GYLSPEVLK 180
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
S+ D+++ GV+L LL G P
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|1FGK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGK|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1
pdb|1FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su5402 Inhibitor
pdb|1AGW|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|1AGW|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of
Fibroblast Growth Factor Receptor 1 In Complex With
Su4984 Inhibitor
pdb|2FGI|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
pdb|2FGI|B Chain B, Crystal Structure Of The Tyrosine Kinase Domain Of Fgf
Receptor 1 In Complex With Inhibitor Pd173074
Length = 310
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 29 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 85
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 86 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 144
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 145 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 202
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 203 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 257
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 258 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 302
>pdb|1P14|A Chain A, Crystal Structure Of A Catalytic-Loop Mutant Of The
Insulin Receptor Tyrosine Kinase
Length = 306
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 69/297 (23%), Positives = 122/297 (41%), Gaps = 51/297 (17%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR--------- 482
YL++K H N+ + N +++ + +I DFG+ + D YR
Sbjct: 145 YLNAK--KFVHRNLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLPV 196
Query: 483 ---APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEW 538
APE + +D++SFGV+L E+ + + P Q L NE+ V+K
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ----------VLKFVM 246
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
D + N E + L+++ C P+ RP+ E+ + +++ S +
Sbjct: 247 DGGYLD----QPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|1YW2|A Chain A, Mutated Mus Musculus P38 Kinase (Mp38)
Length = 360
Score = 55.5 bits (132), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3VUI|A Chain A, Crystal Structure Of A Cysteine-deficient Mutant M2 In Map
Kinase Jnk1
Length = 370
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/194 (28%), Positives = 93/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKVVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANL---SQVIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDATLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 208 IWSVGCIMGEMIKG 221
>pdb|3PY3|A Chain A, Crystal Structure Of Phosphorylated P38alpha Map Kinase
Length = 380
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/208 (27%), Positives = 100/208 (48%), Gaps = 37/208 (17%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 50 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 108
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 109 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 159
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPE 485
Y+HS H ++K SN+ +++ E +I DFGLA T + + G YRAPE
Sbjct: 160 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLA-----RHTDDEMXGXVATRWYRAPE 212
Query: 486 VT-DARKVSQKADVYSFGVLLLELLTGK 512
+ + +Q D++S G ++ ELLTG+
Sbjct: 213 IMLNWMHYNQTVDIWSVGCIMAELLTGR 240
>pdb|4G3D|A Chain A, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|B Chain B, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|D Chain D, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
pdb|4G3D|E Chain E, Crystal Structure Of Human Nf-kappab Inducing Kinase (nik)
Length = 371
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 64/206 (31%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAYYY 382
LG+G+FG ++ + G AVK+ V + FR E++ + +VPL Y
Sbjct: 101 LGRGSFGEVHRMEDKQTGFQCAVKK-----VRLEVFRAEELMACAGLTSPRIVPL---YG 152
Query: 383 SRDEKLLVHDYMPM---GSLSALLHGNRGAGRTPLNWETRSGLALG-ASRAIAYLHSKGP 438
+ E V+ +M + GSL L+ + G P E R+ LG A + YLHS+
Sbjct: 153 AVREGPWVNIFMELLEGGSLGQLV---KEQGCLP---EDRALYYLGQALEGLEYLHSR-- 204
Query: 439 ANSHGNIKSSNILLSKS-YEARISDFGLAHLASPSS------TPNRIDG---YRAPEVTD 488
HG++K+ N+LLS A + DFG A P T + I G + APEV
Sbjct: 205 RILHGDVKADNVLLSSDGSHAALCDFGHAVCLQPDGLGKSLLTGDYIPGTETHMAPEVVL 264
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
R K DV+S ++L +L G P
Sbjct: 265 GRSCDAKVDVWSSCCMMLHMLNGCHP 290
>pdb|2XP2|A Chain A, Structure Of The Human Anaplastic Lymphoma Kinase In
Complex With Crizotinib (Pf-02341066)
Length = 327
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 11 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 70
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 71 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 130
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 131 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 190
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 191 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 249
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 250 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 292
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 293 AIILERIE 300
>pdb|3KK9|A Chain A, Camkii Substrate Complex B
Length = 282
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVPLR 378
E LGKG F + + G+ A K + +S ++F++ + + + H N+V L
Sbjct: 11 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
LV D + G L + R + S +IAY HS G
Sbjct: 71 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNGI 125
Query: 439 ANSHGNIKSSNILLS---KSYEARISDFGLAHLASPSS-------TPNRIDGYRAPEVTD 488
H N+K N+LL+ K +++DFGLA + S TP GY +PEV
Sbjct: 126 V--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP----GYLSPEVLK 179
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
S+ D+++ GV+L LL G P
Sbjct: 180 KDPYSKPVDIWACGVILYILLVGYPP 205
>pdb|3RHX|B Chain B, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
pdb|3RHX|A Chain A, Crystal Structure Of The Catalytic Domain Of Fgfr1 Kinase
In Complex With Arq 069
Length = 306
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/297 (25%), Positives = 126/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 25 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 81
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L R G L+ +
Sbjct: 82 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQARRPPGLEYSYNPSHNPEEQLSSKD 140
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 141 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 198
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 199 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 253
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 254 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 298
>pdb|2HOG|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 20
pdb|2HXL|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1
pdb|2HXQ|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2
pdb|2HY0|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 22
pdb|3F9N|A Chain A, Crystal Structure Of Chk1 Kinase In Complex With Inhibitor
38
Length = 322
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0U|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 54
pdb|2QHM|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 2a
pdb|2QHN|A Chain A, Crystal Structure Of Chek1 In Complex With Inhibitor 1a
pdb|3TKH|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S01
pdb|3TKI|A Chain A, Crystal Structure Of Chk1 In Complex With Inhibitor S25
Length = 323
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 94/203 (46%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G +G A E + V + +K + ++++ + ++HEN+V
Sbjct: 12 VQTLGEGAYGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 72 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 125
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 126 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 184
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 185 HAEPVDVWSCGIVLTAMLAGELP 207
>pdb|2OH4|A Chain A, Crystal Structure Of Vegfr2 With A Benzimidazole-Urea
Inhibitor
Length = 316
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 75/299 (25%), Positives = 127/299 (42%), Gaps = 47/299 (15%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 36 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 94
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRG---AGRTP-------LNWETRSGLA 423
V L L+V ++ G+LS L R +TP L E +
Sbjct: 95 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKTPEDLYKDFLTLEHLICYS 154
Query: 424 LGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR- 482
++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 155 FQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARL 212
Query: 483 -----APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKE 536
APE R + ++DV+SFGVLL E+ + G +P + + E
Sbjct: 213 PLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDE 258
Query: 537 EWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
E+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 259 EFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|2OZA|B Chain B, Structure Of P38alpha Complex
pdb|3P78|A Chain A, P38 Inhibitor-Bound
pdb|3P79|A Chain A, P38 Inhibitor-Bound
pdb|3P7A|A Chain A, P38 Inhibitor-Bound
pdb|3P7B|A Chain A, P38 Inhibitor-Bound
pdb|3P7C|A Chain A, P38 Inhibitor-Bound
pdb|3P5K|A Chain A, P38 Inhibitor-Bound
Length = 366
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 36 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 94
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 95 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 145
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 146 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNW 203
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 204 MHYNQTVDIWSVGCIMAELLTGR 226
>pdb|2GHL|A Chain A, Mutant Mus Musculus P38 Kinase Domain In Complex With
Inhibitor Pg-874743
pdb|2GHM|A Chain A, Mutated Map Kinase P38 (Mus Musculus) In Complex With
Inhbitor Pg-895449
Length = 348
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 26 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 84
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 85 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 135
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DFGLA H + YRAPE+ +
Sbjct: 136 YIHSADII--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMAGFVATRWYRAPEIMLNW 193
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 194 MHYNQTVDIWSVGCIMAELLTGR 216
>pdb|3FI3|A Chain A, Crystal Structure Of Jnk3 With Indazole Inhibitor, Sr-3737
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKXVNHKNIISLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQMLXGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|2I0E|A Chain A, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
pdb|2I0E|B Chain B, Structure Of Catalytic Domain Of Human Protein Kinase C
Beta Ii Complexed With A Bisindolylmaleimide Inhibitor
Length = 353
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 99/228 (43%), Gaps = 35/228 (15%)
Query: 324 VLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR----EKMEVVGSMDHENLV 375
VLGKG+FG K T E+ V +K KDV + + + EK + L
Sbjct: 27 VLGKGSFGKVMLSERKGTDELYAVKILK--KDVVIQDDDVECTMVEKRVLALPGKPPFLT 84
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + + D V +Y+ G L + G + P + +A+G + +L S
Sbjct: 85 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIG----LFFLQS 139
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH--------LASPSSTPNRIDGYRAPEVT 487
KG + ++K N++L +I+DFG+ TP+ Y APE+
Sbjct: 140 KGII--YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD----YIAPEII 193
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVK 535
+ + D ++FGVLL E+L G+AP EG D QS+++
Sbjct: 194 AYQPYGKSVDWWAFGVLLYEMLAGQAPF------EGEDEDELFQSIME 235
>pdb|2F2U|A Chain A, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2F2U|B Chain B, Crystal Structure Of The Rho-Kinase Kinase Domain
pdb|2H9V|A Chain A, Structural Basis For Induced-Fit Binding Of Rho-Kinase To
The Inhibitor Y27632
Length = 402
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/214 (24%), Positives = 94/214 (43%), Gaps = 30/214 (14%)
Query: 322 AEVLGKGTFGTA----YKATLEMGIVVAVKRLKDVTVSEKEF-REKMEVVGSMDHENLVP 376
+V+G+G FG +KA+ ++ + + + + + S+ F E+ +++ + +V
Sbjct: 80 VKVIGRGAFGEVQLVRHKASQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANSPWVVQ 139
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + +V +YMP G L L+ + + LAL A +HS
Sbjct: 140 LFCAFQDDKYLYMVMEYMPGGDLVNLMSNYDVPEKWAKFYTAEVVLALDA------IHSM 193
Query: 437 GPANSHGNIKSSNILLSKSYEARISDF---------GLAHLASPSSTPNRIDGYRAPEVT 487
G H ++K N+LL K +++DF G+ H + TP+ Y +PEV
Sbjct: 194 GLI--HRDVKPDNMLLDKHGHLKLADFGTCMKMDETGMVHCDTAVGTPD----YISPEVL 247
Query: 488 DAR----KVSQKADVYSFGVLLLELLTGKAPTQA 517
++ ++ D +S GV L E+L G P A
Sbjct: 248 KSQGGDGYYGRECDWWSVGVFLFEMLVGDTPFYA 281
>pdb|3NPC|A Chain A, Crystal Structure Of Jnk2 Complexed With Birb796
pdb|3NPC|B Chain B, Crystal Structure Of Jnk2 Complexed With Birb796
Length = 364
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/198 (28%), Positives = 94/198 (47%), Gaps = 24/198 (12%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G A+ L GI VAVK+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAFDTVL--GINVAVKKLSRPFQNQTHAKRAYRE-LVLLKCVNHKNIISLLNVF 92
Query: 382 YSRDEKLLVHD-YMPM----GSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+ D Y+ M +L ++H L+ E S L I +LHS
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQVIHME-------LDHERMSYLLYQMLCGIKHLHSA 145
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVS 493
G H ++K SNI++ +I DFGLA A + TP + YRAPEV +
Sbjct: 146 GII--HRDLKPSNIVVKSDCTLKILDFGLARTACTNFMMTPYVVTRYYRAPEVILGMGYA 203
Query: 494 QKADVYSFGVLLLELLTG 511
D++S G ++ EL+ G
Sbjct: 204 ANVDIWSVGCIMGELVKG 221
>pdb|3DB6|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 902
pdb|3D5X|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Wortmannin.
pdb|3DBE|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 557
pdb|3DBF|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 562
Length = 301
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F Y+ T ++ V A K + + + +EKM + S+D+ ++V
Sbjct: 34 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 93
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P E R + + + YLH+
Sbjct: 94 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARYFMR-QTIQGVQYLHNN--R 146
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDARK 491
H ++K N+ L+ + +I DFGLA TPN Y APEV +
Sbjct: 147 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN----YIAPEVLCKKG 202
Query: 492 VSQKADVYSFGVLLLELLTGKAP--------TQALLNEEGVDLPRWVQSV 533
S + D++S G +L LL GK P T + + +PR + V
Sbjct: 203 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 252
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 92/202 (45%), Gaps = 19/202 (9%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE----KMEVVGSMDHENLVPLR 378
VLGKG+FG ++ G AVK + V +K +E +++++ +DH N+ L
Sbjct: 33 VLGKGSFGEVILCKDKITGQECAVKVISKRQVKQKTDKESLLREVQLLKQLDHPNIXKLY 92
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
++ + LV + G L + + R L+ I Y H
Sbjct: 93 EFFEDKGYFYLVGEVYTGGELFDEIISRKRFSEVDAARIIRQVLS-----GITYXHKNKI 147
Query: 439 ANSHGNIKSSNILL-SKSYEA--RISDFGLA-HLASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K N+LL SKS +A RI DFGL+ H + ++I Y APEV
Sbjct: 148 V--HRDLKPENLLLESKSKDANIRIIDFGLSTHFEASKKXKDKIGTAYYIAPEVLHG-TY 204
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
+K DV+S GV+L LL+G P
Sbjct: 205 DEKCDVWSTGVILYILLSGCPP 226
>pdb|3KL8|A Chain A, Camkiintide Inhibitor Complex
pdb|3KL8|C Chain C, Camkiintide Inhibitor Complex
pdb|3KL8|E Chain E, Camkiintide Inhibitor Complex
pdb|3KL8|G Chain G, Camkiintide Inhibitor Complex
pdb|3KL8|I Chain I, Camkiintide Inhibitor Complex
Length = 269
Score = 55.1 bits (131), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 87/206 (42%), Gaps = 25/206 (12%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFRE---KMEVVGSMDHENLVPLR 378
E LGKG F + + G+ A K + +S ++F++ + + + H N+V L
Sbjct: 12 EELGKGAFSVVRRCVHKTTGLEFAAKIINTKKLSARDFQKLEREARICRKLQHPNIVRLH 71
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
LV D + G L + R + S +IAY HS G
Sbjct: 72 DSIQEESFHYLVFDLVTGGELFEDI-----VAREFYSEADASHCIQQILESIAYCHSNGI 126
Query: 439 ANSHGNIKSSNILLS---KSYEARISDFGLAHLASPSS-------TPNRIDGYRAPEVTD 488
H N+K N+LL+ K +++DFGLA + S TP GY +PEV
Sbjct: 127 V--HRNLKPENLLLASKAKGAAVKLADFGLAIEVNDSEAWHGFAGTP----GYLSPEVLK 180
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
S+ D+++ GV+L LL G P
Sbjct: 181 KDPYSKPVDIWACGVILYILLVGYPP 206
>pdb|3D5U|A Chain A, Crystal Structure Of A Wildtype Polo-Like Kinase 1 (Plk1)
Catalytic Domain
Length = 317
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 98/230 (42%), Gaps = 32/230 (13%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F Y+ T ++ V A K + + + +EKM + S+D+ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P E R + + + YLH+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARYFMR-QTIQGVQYLHNN--R 162
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDARK 491
H ++K N+ L+ + +I DFGLA + TPN Y APEV +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKTLCGTPN----YIAPEVLCKKG 218
Query: 492 VSQKADVYSFGVLLLELLTGKAP--------TQALLNEEGVDLPRWVQSV 533
S + D++S G +L LL GK P T + + +PR + V
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
>pdb|1VYW|A Chain A, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|1VYW|C Chain C, Structure Of Cdk2CYCLIN A WITH PNU-292137
pdb|2C4G|A Chain A, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2C4G|C Chain C, Structure Of Cdk2-Cyclin A With Pha-533514
pdb|2BPM|A Chain A, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BPM|C Chain C, Structure Of Cdk2-Cyclin A With Pha-630529
pdb|2BKZ|A Chain A, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2BKZ|C Chain C, Structure Of Cdk2-Cyclin A With Pha-404611
pdb|2WIH|A Chain A, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIH|C Chain C, Structure Of Cdk2-Cyclin A With Pha-848125
pdb|2WIP|A Chain A, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WIP|C Chain C, Structure Of Cdk2-Cyclin A Complexed With 8-Anilino-1-
Methyl-4,5-Dihydro-1h-Pyrazolo[4,3-H] Quinazoline-3-
Carboxylic Acid
pdb|2WPA|A Chain A, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WPA|C Chain C, Optimisation Of 6,6-Dimethyl Pyrrolo 3,4-C Pyrazoles:
Identification Of Pha-793887, A Potent Cdk Inhibitor
Suitable For Intravenous Dosing
pdb|2WXV|A Chain A, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
pdb|2WXV|C Chain C, Structure Of Cdk2-Cyclin A With A Pyrazolo(4,3-H)
Quinazoline-3-Carboxamide Inhibitor
Length = 309
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 105/211 (49%), Gaps = 19/211 (9%)
Query: 313 DLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVG 367
D+E+ + E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++
Sbjct: 5 DMENFQKV--EKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLK 61
Query: 368 SMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS 427
++H N+V L ++ ++ LV +++ L + + G PL +S L
Sbjct: 62 ELNHPNIVKLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLL 117
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRA 483
+ +A+ HS H ++K N+L++ +++DFGLA P T YRA
Sbjct: 118 QGLAFCHSH--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRA 175
Query: 484 PEV-TDARKVSQKADVYSFGVLLLELLTGKA 513
PE+ + S D++S G + E++T +A
Sbjct: 176 PEILLGCKYYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|3AOX|A Chain A, X-Ray Crystal Structure Of Human Anaplastic Lymphoma
Kinase In Complex With Ch5424802
Length = 344
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 23/248 (9%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 28 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 87
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 88 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 147
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 148 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 207
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 208 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 266
Query: 519 LNEEGVDL 526
N+E ++
Sbjct: 267 SNQEVLEF 274
>pdb|3FV8|A Chain A, Jnk3 Bound To Piperazine Amide Inhibitor, Sr2774
Length = 355
Score = 54.7 bits (130), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKXVNHKNIISLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANL---XQVIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|3L9P|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 367
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 118/318 (37%), Gaps = 60/318 (18%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 52 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 111
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 112 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 171
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 172 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 231
Query: 467 HLASPSSTPNRIDGYRA-----------------PEVTDARKVSQKADVYSFGVLLLELL 509
D YRA PE + K D +SFGVLL E+
Sbjct: 232 R-----------DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 280
Query: 510 T-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCT 568
+ G P + N+E ++ F R + + ++ C
Sbjct: 281 SLGYMPYPSKSNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCW 323
Query: 569 AQYPDNRPSMAEVTSQIE 586
P++RP+ A + +IE
Sbjct: 324 QHQPEDRPNFAIILERIE 341
>pdb|3PZE|A Chain A, Jnk1 In Complex With Inhibitor
Length = 358
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 30 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 86
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 87 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 142
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 143 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 201
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 202 LWSVGCIMGEMVCHK 216
>pdb|4FNW|A Chain A, Crystal Structure Of The Apo F1174l Anaplastic Lymphoma
Kinase Catalytic Domain
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 120/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 12 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ ++H+N+V + ++ + M G L + L R
Sbjct: 72 VCSEQDELDFLMEALIISKLNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 192 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 251 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 293
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 294 AIILERIE 301
>pdb|3PJ8|A Chain A, Structure Of Cdk2 In Complex With A
Pyrazolo[4,3-D]pyrimidine Bioisostere Of Roscovitine
Length = 299
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 65
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 121
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 122 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3FI2|A Chain A, Crystal Structure Of Jnk3 With Amino-Pyrazole Inhibitor,
Sr- 3451
Length = 353
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKXVNHKNIISLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDXTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|3LCT|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
pdb|3LCS|A Chain A, Crystal Structure Of The Anaplastic Lymphoma Kinase
Catalytic Domain
Length = 344
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 72/318 (22%), Positives = 118/318 (37%), Gaps = 60/318 (18%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 29 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 88
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 89 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 148
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 149 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 208
Query: 467 HLASPSSTPNRIDGYRA-----------------PEVTDARKVSQKADVYSFGVLLLELL 509
D YRA PE + K D +SFGVLL E+
Sbjct: 209 R-----------DIYRAGYYRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIF 257
Query: 510 T-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCT 568
+ G P + N+E ++ F R + + ++ C
Sbjct: 258 SLGYMPYPSKSNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCW 300
Query: 569 AQYPDNRPSMAEVTSQIE 586
P++RP+ A + +IE
Sbjct: 301 QHQPEDRPNFAIILERIE 318
>pdb|1RQQ|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|1RQQ|B Chain B, Crystal Structure Of The Insulin Receptor Kinase In
Complex With The Sh2 Domain Of Aps
pdb|2AUH|A Chain A, Crystal Structure Of The Grb14 Bps Region In Complex With
The Insulin Receptor Tyrosine Kinase
pdb|2B4S|B Chain B, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|2B4S|D Chain D, Crystal Structure Of A Complex Between Ptp1b And The
Insulin Receptor Tyrosine Kinase
pdb|3BU3|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide
pdb|3BU5|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Peptide And Atp
pdb|3BU6|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With Irs2 Krlb Phosphopeptide
Length = 306
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 67/294 (22%), Positives = 122/294 (41%), Gaps = 45/294 (15%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGYR 482
YL++K H ++ + N +++ + +I DFG+ + P R +
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---WM 199
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAE 541
APE + +D++SFGV+L E+ + + P Q L NE+ V+K
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ----------VLKFVMDGG 249
Query: 542 VFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
D + N E + L+++ C P+ RP+ E+ + +++ S +
Sbjct: 250 YLD----QPDNCPERVTDLMRM---CWQFNPNMRPTFLEIVNLLKDDLHPSFPE 296
>pdb|2EXC|X Chain X, Inhibitor Complex Of Jnk3
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 86
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 87 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 142
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 143 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 201
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 202 IWSVGCIMGEMVRHK 216
>pdb|4H36|A Chain A, Crystal Structure Of Jnk3 In Complex With Atf2 Peptide
pdb|4H39|A Chain A, Crystal Structure Of Jnk3 In Complex With Jip1 Peptide
pdb|4H3B|A Chain A, Crystal Structure Of Jnk3 In Complex With Sab Peptide
pdb|4H3B|C Chain C, Crystal Structure Of Jnk3 In Complex With Sab Peptide
Length = 356
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 30 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 86
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 87 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 142
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 143 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 201
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 202 IWSVGCIMGEMVRHK 216
>pdb|4FVP|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain (Apo
Form)
pdb|4FVQ|A Chain A, Crystal Structure Of The Jak2 Pseudokinase Domain
(Mg-Atp-Bound Form)
Length = 289
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/291 (24%), Positives = 113/291 (38%), Gaps = 48/291 (16%)
Query: 315 EDLLRASAEVLGKGTFGTAYKATL----------EMGIVVAVKRLKDVTVSEKEFREKME 364
EDL+ E LG+GTF +K E +++ V SE F E
Sbjct: 8 EDLI--FNESLGQGTFTKIFKGVRREVGDYGQLHETEVLLKVLDKAHRNYSES-FFEAAS 64
Query: 365 VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
++ + H++LV DE +LV +++ GSL L N+ + W+ L
Sbjct: 65 MMSKLSHKHLVLNYGVCVCGDENILVQEFVKFGSLDTYLKKNKNC--INILWKLEVAKQL 122
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASP----SSTPNRIDG 480
A A+ +L HGN+ + NILL + + + + L+ P + P I
Sbjct: 123 AA--AMHFLEENTLI--HGNVCAKNILLIREEDRKTGNPPFIKLSDPGISITVLPKDILQ 178
Query: 481 YRAPEV-----TDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVV 534
R P V + + ++ D +SFG L E+ + G P AL D R +Q
Sbjct: 179 ERIPWVPPECIENPKNLNLATDKWSFGTTLWEICSGGDKPLSAL------DSQRKLQFYE 232
Query: 535 KEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 585
R+Q + +L L NC PD+RPS + +
Sbjct: 233 D-------------RHQLPAPKAAELANLINNCMDYEPDHRPSFRAIIRDL 270
>pdb|2B1P|A Chain A, Inhibitor Complex Of Jnk3
Length = 355
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 29 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 85
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 86 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 141
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 142 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 200
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 201 IWSVGCIMGEMVRHK 215
>pdb|4FNX|A Chain A, Crystal Structure Of The Apo R1275q Anaplastic Lymphoma
Kinase Catalytic Domain
pdb|4FNY|A Chain A, Crystal Structure Of The R1275q Anaplastic Lymphoma Kinase
Catalytic Domain In Complex With A Benzoxazole Inhibitor
Length = 327
Score = 54.7 bits (130), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 12 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 192 QDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 251 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 293
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 294 AIILERIE 301
>pdb|3HNG|A Chain A, Crystal Structure Of Vegfr1 In Complex With
N-(4-chlorophenyl)-2-
((pyridin-4-ylmethyl)amino)benzamide
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 48/185 (25%), Positives = 83/185 (44%), Gaps = 25/185 (13%)
Query: 408 GAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH 467
G + P+ E + +R + +L S+ H ++ + NILLS++ +I DFGLA
Sbjct: 190 GFYKEPITMEDLISYSFQVARGMEFLSSR--KCIHRDLAARNILLSENNVVKICDFGLAR 247
Query: 468 LASPSSTPNRIDGYR------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLN 520
+ R R APE + S K+DV+S+GVLL E+ + G +P
Sbjct: 248 DIYKNPDYVRKGDTRLPLKWMAPESIFDKIYSTKSDVWSYGVLLWEIFSLGGSPYP---- 303
Query: 521 EEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAE 580
GV + S ++E +R + E ++ Q+ ++C + P RP AE
Sbjct: 304 --GVQMDEDFCSRLREG----------MRMRAPEYSTPEIYQIMLDCWHRDPKERPRFAE 351
Query: 581 VTSQI 585
+ ++
Sbjct: 352 LVEKL 356
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 63/226 (27%), Positives = 97/226 (42%), Gaps = 30/226 (13%)
Query: 325 LGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAY 380
LG G +G K T + +++ T S + E++ V+ +DH N++ L +
Sbjct: 45 LGSGAYGEVLLCRDKVTHVERAIKIIRKTSVSTSSNSKLLEEVAVLKLLDHPNIMKLYDF 104
Query: 381 YYSRDEKLLVHDYMPMGSL-SALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ + LV + G L ++H R N + + + YLH
Sbjct: 105 FEDKRNYYLVMECYKGGELFDEIIH------RMKFNEVDAAVIIKQVLSGVTYLHKHNIV 158
Query: 440 NSHGNIKSSNILL-SKSYEA--RISDFGL-AHLASPSSTPNRIDG--YRAPEVTDARKVS 493
H ++K N+LL SK +A +I DFGL A + R+ Y APEV +K
Sbjct: 159 --HRDLKPENLLLESKEKDALIKIVDFGLSAVFENQKKMKERLGTAYYIAPEVL-RKKYD 215
Query: 494 QKADVYSFGVLLLELLTGKAP-----TQALLN--EEG---VDLPRW 529
+K DV+S GV+L LL G P Q +L E+G D P W
Sbjct: 216 EKCDVWSIGVILFILLAGYPPFGGQTDQEILRKVEKGKYTFDSPEW 261
>pdb|3OXI|A Chain A, Design And Synthesis Of Disubstituted Thiophene And
Thiazole Based Inhibitors Of Jnk For The Treatment Of
Neurodegenerative Diseases
pdb|3OY1|A Chain A, Highly Selective C-Jun N-Terminal Kinase (Jnk) 2 And 3
Inhibitors With In Vitro Cns-Like Pharmacokinetic
Properties
Length = 362
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 35 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 91
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 92 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 147
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 148 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 206
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 207 IWSVGCIMGEMVRHK 221
>pdb|2W17|A Chain A, Cdk2 In Complex With The Imidazole Pyrimidine Amide,
Compound (S)-8b
pdb|3IG7|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efp With Cdk-2
pdb|3IGG|A Chain A, Novel Cdk-5 Inhibitors - Crystal Structure Of Inhibitor
Efq With Cdk-2
pdb|1B38|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1B39|A Chain A, Human Cyclin-Dependent Kinase 2 Phosphorylated On Thr 160
pdb|1E1V|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu2058
pdb|1E1X|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Nu6027
pdb|1H00|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H07|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1H08|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|2R3R|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|4ACM|A Chain A, Cdk2 In Complex With
3-Amino-6-(4-{[2-(Dimethylamino)ethyl]
Sulfamoyl}-Phenyl)-N-Pyridin-3-Ylpyrazine-2-Carboxamide
pdb|3SW4|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|3SW7|A Chain A, Crystal Structure Of The Cdk2 In Complex With
Thiazolylpyrimidine Inhibitor
pdb|1OIQ|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
pdb|1V1K|A Chain A, Cdk2 In Complex With A Disubstituted 4, 6-Bis Anilino
Pyrimidine Cdk4 Inhibitor
pdb|1URW|A Chain A, Cdk2 In Complex With An Imidazo[1,2-B]pyridazine
pdb|2VV9|A Chain A, Cdk2 In Complex With An Imidazole Piperazine
pdb|2W06|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5c
pdb|2R3G|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3H|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3F|A Chain A, Crystal Structure Of Cyclin-dependent Kinase 2 With
Inhibitor
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 65
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 121
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 122 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4ERW|A Chain A, Cdk2 In Complex With Staurosporine
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 72
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 73 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 128
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEVTDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ K
Sbjct: 129 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 186
Query: 492 -VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|3ELJ|A Chain A, Jnk1 Complexed With A Bis-Anilino-Pyrrolopyrimidine
Inhibitor
Length = 369
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 41 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 97
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 98 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 153
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 154 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 212
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 213 LWSVGCIMGEMVCHK 227
>pdb|1FIN|A Chain A, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1FIN|C Chain C, Cyclin A-Cyclin-Dependent Kinase 2 Complex
pdb|1CKP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Purvalanol B
pdb|1BUH|A Chain A, Crystal Structure Of The Human Cdk2 Kinase Complex With
Cell Cycle-Regulatory Protein Ckshs1
pdb|1DM2|A Chain A, Human Cyclin-Dependent Kinase 2 Complexed With The
Inhibitor Hymenialdisine
pdb|1DI8|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With
4-[3-Hydroxyanilino]-6,7-Dimethoxyquinazoline
pdb|1F5Q|A Chain A, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1F5Q|C Chain C, Crystal Structure Of Murine Gamma Herpesvirus Cyclin
Complexed To Human Cyclin Dependent Kinase 2
pdb|1FVT|A Chain A, The Structure Of Cyclin-Dependent Kinase 2 (Cdk2) In
Complex With An Oxindole Inhibitor
pdb|1FVV|A Chain A, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1FVV|C Chain C, The Structure Of Cdk2CYCLIN A IN COMPLEX WITH AN OXINDOLE
Inhibitor
pdb|1JSV|A Chain A, The Structure Of Cyclin-dependent Kinase 2 (cdk2) In
Complex With 4-[(6-amino-4-pyrimidinyl)
Amino]benzenesulfonamide
pdb|1G5S|A Chain A, Crystal Structure Of Human Cyclin Dependent Kinase 2
(Cdk2) In Complex With The Inhibitor H717
pdb|1JVP|P Chain P, Crystal Structure Of Human Cdk2 (Unphosphorylated) In
Complex With Pkf049-365
pdb|1GIH|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1KE5|A Chain A, Cdk2 Complexed With N-methyl-4-{[(2-oxo-1,2-dihydro-3h-
Indol-3-ylidene)methyl]amino}benzenesulfonamide
pdb|1KE6|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
N-Methyl-{4-
[2-(7-Oxo-6,7-Dihydro-8h-[1,3]thiazolo[5,4-E]indol-8-
Ylidene)hydrazino]phenyl}methanesulfonamide
pdb|1KE7|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[(2,2-
Dioxido-1,
3-Dihydro-2-Benzothien-5-Yl)amino]methylene}-5-
(1,3-Oxazol-5-Yl)-1,3-Dihydro-2h-Indol-2-One
pdb|1KE8|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With
4-{[(2-Oxo-
1,2-Dihydro-3h-Indol-3-Ylidene)methyl]amino}-N-(1,3-
Thiazol-2-Yl)benzenesulfonamide
pdb|1KE9|A Chain A, Cyclin-Dependent Kinase 2 (Cdk2) Complexed With 3-{[4-
({[amino(Imino)methyl]aminosulfonyl)anilino]methylene}-
2- Oxo-2,3-Dihydro-1h-Indole
pdb|1H0V|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor
2-Amino-6-[(R)-Pyrrolidino-5'-Yl]methoxypurine
pdb|1H0W|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 2-Amino-6-[cyclohex-3-Enyl]methoxypurine
pdb|1P2A|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Trisubstituted Naphthostyril Inhibitor
pdb|1OKV|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKV|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Ile-Phe-Nh2
pdb|1OKW|A Chain A, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OKW|C Chain C, Cyclin A Binding Groove Inhibitor
Ac-Arg-Arg-Leu-Asn-(M-Cl-Phe)-Nh2
pdb|1OL1|A Chain A, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL1|C Chain C, Cyclin A Binding Groove Inhibitor
H-Cit-Cit-Leu-Ile-(P-F-Phe)-Nh2
pdb|1OL2|A Chain A, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1OL2|C Chain C, Cyclin A Binding Groove Inhibitor
H-Arg-Arg-Leu-Asn-(P-F-Phe)-Nh2
pdb|1PW2|A Chain A, Apo Structure Of Human Cyclin-Dependent Kinase 2
pdb|1PXI|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-(2,5-dichloro-thiophen-3-yl)-pyrimidin-2-
Ylamine
pdb|1PXJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Ylamine
pdb|1PXK|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-dimethyl-thiazol-5-yl)pyrimidin-2-yl]-
N'-hydroxyiminoformamide
pdb|1PXL|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2,4-dimethyl-thiazol-5-yl)-pyrimidin-2-yl]-
(4-trifluoromethyl-phenyl)-amine
pdb|1R78|A Chain A, Cdk2 Complex With A 4-alkynyl Oxindole Inhibitor
pdb|1PXM|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 3-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-
Ylamino]-Phenol
pdb|1PXN|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 4-[4-(4-Methyl-2-Methylamino-Thiazol-5-Yl)-
Pyrimidin-2-Ylamino]-Phenol
pdb|1PXO|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
[4-(2-Amino-4-Methyl-Thiazol-5-Yl)-Pyrimidin-2-
Yl]-(3-Nitro-Phenyl)-Amine
pdb|1PXP|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor
N-[4-(2,4-Dimethyl-Thiazol-5-Yl)-Pyrimidin-2-Yl]-
N',N'-Dimethyl-Benzene-1,4-Diamine
pdb|1VYZ|A Chain A, Structure Of Cdk2 Complexed With Pnu-181227
pdb|1PYE|A Chain A, Crystal Structure Of Cdk2 With Inhibitor
pdb|1URC|A Chain A, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1URC|C Chain C, Cyclin A Binding Groove Inhibitor Ace-Arg-Lys-Leu- Phe-Gly
pdb|1W0X|C Chain C, Crystals Structure Of Human Cdk2 In Complex With The
Inhibitor Olomoucine.
pdb|1WCC|A Chain A, Screening For Fragment Binding By X-Ray Crystallography
pdb|1Y8Y|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|1Y91|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Pyrazolo[1, 5-A]pyrimidine Inhibitor
pdb|2BHE|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 5-Bromo-Indirubine
pdb|2BHH|A Chain A, Human Cyclin Dependent Protein Kinase 2 In Complex With
The Inhibitor 4-Hydroxypiperindinesulfonyl-Indirubine
pdb|2B52|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Dph-
042562
pdb|2B53|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With Din-
234325
pdb|2B54|A Chain A, Human Cyclin Dependent Kinase 2 (Ckd2)complexed With Din-
232305
pdb|2B55|A Chain A, Human Cyclin Dependent Kinase 2 (Cdk2) Complexed With
Indenopyraxole Din-101312
pdb|2BTR|A Chain A, Structure Of Cdk2 Complexed With Pnu-198873
pdb|2BTS|A Chain A, Structure Of Cdk2 Complexed With Pnu-230032
pdb|2C68|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C69|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6I|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6K|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6L|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6M|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6O|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2EXM|A Chain A, Human Cdk2 In Complex With Isopentenyladenine
pdb|1YKR|A Chain A, Crystal Structure Of Cdk2 With An Aminoimidazo Pyridine
Inhibitor
pdb|2A0C|X Chain X, Human Cdk2 In Complex With Olomoucine Ii, A Novel 2,6,9-
Trisubstituted Purine Cyclin-Dependent Kinase Inhibitor
pdb|2C5N|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5N|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5O|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5V|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5X|C Chain C, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2C5Y|A Chain A, Differential Binding Of Inhibitors To Active And Inactive
Cdk2 Provides Insights For Drug Design
pdb|2A4L|A Chain A, Human Cyclin-Dependent Kinase 2 In Complex With
Roscovitine
pdb|2FVD|A Chain A, Cyclin Dependent Kinase 2 (Cdk2) With Diaminopyrimidine
Inhibitor
pdb|2I40|A Chain A, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2I40|C Chain C, Cdk2CYCLIN A COMPLEXED WITH A THIOPHENE CARBOXAMIDE
INHIBITOR
pdb|2CLX|A Chain A, 4-Arylazo-3,5-Diamino-1h-Pyrazole Cdk Inhibitors: Sar
Study, Crystal Structure In Complex With Cdk2,
Selectivity, And Cellular Effects
pdb|2DUV|A Chain A, Structure Of Cdk2 With A 3-Hydroxychromones
pdb|2UUE|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UUE|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2UZN|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZO|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2V0D|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|1AQ1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor Staurosporine
pdb|1HCK|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|1HCL|A Chain A, Human Cyclin-Dependent Kinase 2
pdb|2J9M|A Chain A, Crystal Structure Of Cdk2 In Complex With Macrocyclic
Aminopyrimidine
pdb|2V22|A Chain A, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2V22|C Chain C, Replace: A Strategy For Iterative Design Of Cyclin Binding
Groove Inhibitors
pdb|2VTA|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTH|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design
pdb|2VTI|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTJ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTL|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTM|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTN|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTO|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTP|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTQ|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTR|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTS|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VTT|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2VU3|A Chain A, Identification Of N-(4-Piperidinyl)-4-(2,6-
Dichlorobenzoylamino)-1h-Pyrazole-3-Carboxamide
(At7519), A Novel Cyclin Dependent Kinase Inhibitor
Using Fragment- Based X-Ray Crystallography And
Structure Based Drug Design.
pdb|2R64|A Chain A, Crystal Structure Of A 3-Aminoindazole Compound With Cdk2
pdb|2W05|A Chain A, Structure Of Cdk2 In Complex With An Imidazolyl
Pyrimidine, Compound 5b
pdb|3EID|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EID|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|A Chain A, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EJ1|C Chain C, Cdk2CYCLINA COMPLEXED WITH A PYRAZOLOPYRIDAZINE INHIBITOR
pdb|3EOC|A Chain A, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|3EOC|C Chain C, Cdk2/cyclina Complexed With A Imidazo Triazin-2-amine
pdb|2W1H|A Chain A, Fragment-Based Discovery Of The Pyrazol-4-Yl Urea
(At9283), A Multi-Targeted Kinase Inhibitor With Potent
Aurora Kinase Activity
pdb|3F5X|A Chain A, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3F5X|C Chain C, Cdk-2-Cyclin Complex With Indazole Inhibitor 9 Bound At
Its Active Site
pdb|3FZ1|A Chain A, Crystal Structure Of A Benzthiophene Inhibitor Bound To
Human Cyclin-Dependent Kinase-2 (Cdk-2)
pdb|2WEV|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WEV|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WFY|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2WHB|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|A Chain A, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|2X1N|C Chain C, Truncation And Optimisation Of Peptide Inhibitors Of Cdk2,
Cyclin A Through Structure Guided Design
pdb|3LFN|A Chain A, Crystal Structure Of Cdk2 With Sar57, An Aminoindazole
Type Inhibitor
pdb|3LFQ|A Chain A, Crystal Structure Of Cdk2 With Sar60, An Aminoindazole
Type Inhibitor
pdb|3LFS|A Chain A, Crystal Structure Of Cdk2 With Sar37, An Aminoindazole
Type Inhibitor
pdb|2XMY|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|2XNB|A Chain A, Discovery And Characterisation Of
2-Anilino-4-(Thiazol-5-Yl) Pyrimidine Transcriptional
Cdk Inhibitors As Anticancer Agents
pdb|3LE6|A Chain A, The Structure Of Cyclin Dependent Kinase 2 (Ckd2) With A
Pyrazolobenzodiazepine Inhibitor
pdb|3NS9|A Chain A, Crystal Structure Of Cdk2 In Complex With Inhibitor Bs-194
pdb|3S2P|A Chain A, Crystal Structure Of Cdk2 With A 2-Aminopyrimidine
Compound
pdb|3UNJ|A Chain A, Cdk2 In Complex With Inhibitor Yl1-038-31
pdb|3UNK|A Chain A, Cdk2 In Complex With Inhibitor Yl5-083
pdb|3TI1|A Chain A, Cdk2 In Complex With Sunitinib
pdb|3TIY|A Chain A, Cdk2 In Complex With Nsc 35676
pdb|3TIZ|A Chain A, Cdk2 In Complex With Nsc 111848
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 64
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 120
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 121 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3PXF|A Chain A, Cdk2 In Complex With Two Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXQ|A Chain A, Cdk2 In Complex With 3 Molecules Of
8-Anilino-1-Naphthalene Sulfonate
pdb|3PXR|A Chain A, Apo Cdk2 Crystallized From Jeffamine
pdb|3PXY|A Chain A, Cdk2 In Complex With Inhibitor Jws648
pdb|3PXZ|A Chain A, Cdk2 Ternary Complex With Jws648 And Ans
pdb|3PY0|A Chain A, Cdk2 In Complex With Inhibitor Su9516
pdb|3PY1|A Chain A, Cdk2 Ternary Complex With Su9516 And Ans
pdb|3QL8|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-260
pdb|3QQF|A Chain A, Cdk2 In Complex With Inhibitor L1
pdb|3QQG|A Chain A, Cdk2 In Complex With Inhibitor L2-5
pdb|3QQH|A Chain A, Cdk2 In Complex With Inhibitor L2-2
pdb|3QQJ|A Chain A, Cdk2 In Complex With Inhibitor L2
pdb|3QQL|A Chain A, Cdk2 In Complex With Inhibitor L3
pdb|3QRT|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc2-55
pdb|3QRU|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-12
pdb|3QWJ|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-142
pdb|3QWK|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-150
pdb|3QX2|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-190
pdb|3QX4|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-78
pdb|3QXO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-84
pdb|3QZF|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-52
pdb|3QZG|A Chain A, Cdk2 In Complex With Inhibitor Jws-6-76
pdb|3QZH|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-124
pdb|3QZI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-126
pdb|3R1Q|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-102
pdb|3R1S|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-127
pdb|3R1Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-134
pdb|3R28|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-140
pdb|3R6X|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-158
pdb|3R71|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-162
pdb|3R73|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-164
pdb|3R7E|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-67
pdb|3R7I|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-74
pdb|3R7U|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-75
pdb|3R7V|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-9
pdb|3R7Y|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-88
pdb|3R83|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-92
pdb|3R8L|A Chain A, Cdk2 In Complex With Inhibitor L3-4
pdb|3R8M|A Chain A, Cdk2 In Complex With Inhibitor L3-3
pdb|3R8P|A Chain A, Cdk2 In Complex With Inhibitor Nsk-Mc1-6
pdb|3RAI|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-160
pdb|3RM6|A Chain A, Cdk2 In Complex With Inhibitor Kvr-2-80
pdb|3RM7|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-91
pdb|3ROY|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-154
pdb|3RPO|A Chain A, Cdk2 In Complex With Inhibitor Kvr-1-156
pdb|4EZ3|A Chain A, Cdk2 In Complex With Nsc 134199
pdb|4EZ7|A Chain A, Cdk2 In Complex With Staurosporine And 2 Molecules Of
8-Anilino-1- Naphthalene Sulfonic Acid
pdb|3QQK|A Chain A, Cdk2 In Complex With Inhibitor L4
pdb|3QTQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-137
pdb|3QTR|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-148
pdb|3QTS|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-12
pdb|3QTU|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-132
pdb|3QTW|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-13
pdb|3QTX|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-35
pdb|3QTZ|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-36
pdb|3QU0|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-38
pdb|3QXP|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
pdb|3R8U|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-132
pdb|3R8V|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-135
pdb|3R8Z|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-136
pdb|3R9D|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-135
pdb|3R9H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-142
pdb|3R9N|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-21
pdb|3R9O|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-143
pdb|3RAH|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-22
pdb|3RAK|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-32
pdb|3RAL|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-34
pdb|3RJC|A Chain A, Cdk2 In Complex With Inhibitor L4-12
pdb|3RK5|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-72
pdb|3RK7|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-71
pdb|3RK9|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-74
pdb|3RKB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-73
pdb|3RMF|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-33
pdb|3RNI|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-86
pdb|3RPR|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-49
pdb|3RPV|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-88
pdb|3RPY|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-40
pdb|3RZB|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-23
pdb|3S00|A Chain A, Cdk2 In Complex With Inhibitor L4-14
pdb|3S0O|A Chain A, Cdk2 In Complex With Inhibitor Rc-1-138
pdb|3S1H|A Chain A, Cdk2 In Complex With Inhibitor Rc-2-39
pdb|3SQQ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-96
pdb|4GCJ|A Chain A, Cdk2 In Complex With Inhibitor Rc-3-89
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 14 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 72
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 73 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 128
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 129 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 186
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 187 YYSTAVDIWSLGCIFAEMVTRRA 209
>pdb|1PF8|A Chain A, Crystal Structure Of Human Cyclin-dependent Kinase 2
Complexed With A Nucleoside Inhibitor
Length = 298
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 64
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 120
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 121 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3E3P|A Chain A, Glycogen Synthase Kinase From Leishmania Major
pdb|3E3P|B Chain B, Glycogen Synthase Kinase From Leishmania Major
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 57/210 (27%), Positives = 100/210 (47%), Gaps = 35/210 (16%)
Query: 326 GKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFREK----MEVVGSMDHENLVPL 377
G+GTFGT K+T G+ VA+K++ + + FR + M+ + + H N+V L
Sbjct: 32 GQGTFGTVQLGKEKST---GMSVAIKKV----IQDPRFRNRELQIMQDLAVLHHPNIVQL 84
Query: 378 RAYYYS---RDEKLL----VHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASR 428
++Y+Y+ RD + + V +Y+P +L + R P+ + R
Sbjct: 85 QSYFYTLGERDRRDIYLNVVMEYVP-DTLHRCCRNYYRRQVAPPPILIKV---FLFQLIR 140
Query: 429 AIAYLHSKGPANSHGNIKSSNILLSKSY-EARISDFGLAHLASPSSTPNRI----DGYRA 483
+I LH H +IK N+L++++ ++ DFG A SPS PN YRA
Sbjct: 141 SIGCLHLPSVNVCHRDIKPHNVLVNEADGTLKLCDFGSAKKLSPSE-PNVAYICSRYYRA 199
Query: 484 PE-VTDARKVSQKADVYSFGVLLLELLTGK 512
PE + + + D++S G + E++ G+
Sbjct: 200 PELIFGNQHYTTAVDIWSVGCIFAEMMLGE 229
>pdb|2O0U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-{3-Cyano-6-[3-(1-
Piperidinyl)propanoyl]-4,5,6,7-Tetrahydrothieno[2,
3-C]pyridin-2-Yl}- 1-Naphthalenecarboxamide
pdb|2O2U|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Cyano-4,5,6,7-
Tetrahydro-1-Benzothien-2-Yl)-2-Fluorobenzamide
pdb|2ZDT|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|2ZDU|A Chain A, Crystal Structure Of Human Jnk3 Complexed With An
Isoquinolone Inhibitor
pdb|3DA6|A Chain A, Crystal Structure Of Human Jnk3 Complexed With
N-(3-Methyl-
4-(3-(2-(Methylamino)pyrimidin-4-Yl)pyridin-2-Yloxy)
Naphthalen-1-Yl)-1h-Benzo[d]imidazol-2-Amine
pdb|2WAJ|A Chain A, Crystal Structure Of Human Jnk3 Complexed With A
1-Aryl-3,4- Dihydroisoquinoline Inhibitor
pdb|3V6R|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6R|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|A Chain A, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
pdb|3V6S|B Chain B, Discovery Of Potent And Selective Covalent Inhibitors Of
Jnk
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|3TTJ|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-359, A Jnk
Inhibitor For The Prevention Of Ischemia-Reperfusion
Injury
pdb|3TTI|A Chain A, Crystal Structure Of Jnk3 Complexed With Cc-930, An Orally
Active Anti-Fibrotic Jnk Inhibitor
Length = 464
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 130
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 131 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 186
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 187 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 245
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 246 IWSVGCIMGEMVRHK 260
>pdb|3EZR|A Chain A, Cdk-2 With Indazole Inhibitor 17 Bound At Its Active Site
pdb|3EZV|A Chain A, Cdk-2 With Indazole Inhibitor 9 Bound At Its Active Site
Length = 300
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 9 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 67
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 68 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 123
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 124 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCKY 181
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 182 YSTAVDIWSLGCIFAEMVTRRA 203
>pdb|1GZ8|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The
Inhibitor 2-Amino-6-(3'-Methyl-2'-Oxo)butoxypurine
pdb|2R3Q|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3M|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3I|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3N|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3O|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3P|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3K|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3J|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|2R3L|A Chain A, Crystal Structure Of Cyclin-Dependent Kinase 2 With
Inhibitor
pdb|1W8C|A Chain A, Co-crystal Structure Of
6-cyclohexylmethoxy-8-isopropyl-9h- Purin-2-ylamine And
Monomeric Cdk2
Length = 299
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 65
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 121
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEVTDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ K
Sbjct: 122 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGXK 179
Query: 492 -VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3PFQ|A Chain A, Crystal Structure And Allosteric Activation Of Protein
Kinase C Beta Ii
Length = 674
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/228 (26%), Positives = 100/228 (43%), Gaps = 35/228 (15%)
Query: 324 VLGKGTFG----TAYKATLEMGIVVAVKRLKDVTVSEKEFR----EKMEVVGSMDHENLV 375
VLGKG+FG + K T E+ V +K KDV + + + EK + L
Sbjct: 348 VLGKGSFGKVMLSERKGTDELYAVKILK--KDVVIQDDDVECTMVEKRVLALPGKPPFLT 405
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + + D V +Y+ G L + G + P + +A+G + +L S
Sbjct: 406 QLHSCFQTMDRLYFVMEYVNGGDLMYHIQ-QVGRFKEPHAVFYAAEIAIG----LFFLQS 460
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH--------LASPSSTPNRIDGYRAPEVT 487
KG + ++K N++L +I+DFG+ TP+ Y APE+
Sbjct: 461 KGII--YRDLKLDNVMLDSEGHIKIADFGMCKENIWDGVTTKXFCGTPD----YIAPEII 514
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVK 535
+ + D ++FGVLL E+L G+AP EG D QS+++
Sbjct: 515 AYQPYGKSVDWWAFGVLLYEMLAGQAPF------EGEDEDELFQSIME 556
>pdb|1PMN|A Chain A, Crystal Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMQ|A Chain A, The Structure Of Jnk3 In Complex With An Imidazole-
Pyrimidine Inhibitor
pdb|1PMU|A Chain A, The Crystal Structure Of Jnk3 In Complex With A
Phenantroline Inhibitor
pdb|1PMV|A Chain A, The Structure Of Jnk3 In Complex With A
Dihydroanthrapyrazole Inhibitor
Length = 364
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 93
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 94 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 149
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 150 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 208
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 209 IWSVGCIMGEMVRHK 223
>pdb|2OK1|A Chain A, Crystal Structure Of Jnk3 Bound To N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2P33|A Chain A, Synthesis And Sar Of Aminopyrimidines As Novel C-Jun N-
Terminal Kinase (Jnk) Inhibitors
pdb|3CGF|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3CGO|A Chain A, Irak-4 Inhibitors (Part Ii)- A Structure Based Assessment
Of Imidazo[1,2 A]pyridine Binding
pdb|3G90|X Chain X, Jnk-3 Bound To
(Z)-5-Fluoro-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)
Methyl)-3-(Hydroxyimino)indolin-2-One
pdb|3G9N|A Chain A, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Phenylindolin-2-One
pdb|3G9L|X Chain X, Jnk3 Bound To
(Z)-1-((6-Fluoro-4h-Benzo[d][1,3]dioxin-8-Yl)methyl)-3-
(Hydroxyimino)-4-Styrylindolin-2-One
Length = 365
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 37 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 93
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 94 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 149
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 150 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 208
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 209 IWSVGCIMGEMVRHK 223
>pdb|3O96|A Chain A, Crystal Structure Of Human Akt1 With An Allosteric
Inhibitor
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRLK-DVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K LK +V V++ E + V+ + H L
Sbjct: 157 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 213
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L L R E R+ GA A+ Y
Sbjct: 214 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARF-YGAEIVSALDY 266
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + ++K N++L K +I+DFGL A + + TP Y AP
Sbjct: 267 LHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE----YLAP 321
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 322 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 351
>pdb|3PTG|A Chain A, Design And Synthesis Of A Novel, Orally Efficacious
Tri-Substituted Thiophene Based Jnk Inhibitor
Length = 363
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKTLEEFQDVYLVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVRHK 222
>pdb|2XS0|A Chain A, Linear Binding Motifs For Jnk And For Calcineurin
Antagonistically Control The Nuclear Shuttling Of Nfat4
Length = 386
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/194 (28%), Positives = 92/194 (47%), Gaps = 16/194 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 38 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 94
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 95 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 150
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S P + YRAPEV + D
Sbjct: 151 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMVPFVVTRYYRAPEVILGMGYKENVD 209
Query: 498 VYSFGVLLLELLTG 511
++S G ++ E++ G
Sbjct: 210 IWSVGCIMGEMIKG 223
>pdb|3D5V|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain.
pdb|3DB8|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 041
pdb|3DBC|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 257
pdb|3DBD|A Chain A, Crystal Structure Of An Activated (Thr->asp) Polo-Like
Kinase 1 (Plk1) Catalytic Domain In Complex With
Compound 094
Length = 317
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F Y+ T ++ V A K + + + +EKM + S+D+ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P E R + + + YLH+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARYFMR-QTIQGVQYLHNN--R 162
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDARK 491
H ++K N+ L+ + +I DFGLA TPN Y APEV +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKDLCGTPN----YIAPEVLCKKG 218
Query: 492 VSQKADVYSFGVLLLELLTGKAP--------TQALLNEEGVDLPRWVQSV 533
S + D++S G +L LL GK P T + + +PR + V
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
>pdb|2IW6|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW6|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
pdb|2IW9|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A Complexed
With A Bisanilinopyrimidine Inhibitor
Length = 302
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 11 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 69
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 70 LLDVIHTENKLYLVFEFL-HQDLKTFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 125
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 126 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 183
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 184 YSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4FNZ|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Piperidine-Carboxamide Inhibitor 2
Length = 327
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 12 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 71
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 72 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 131
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 132 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 191
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 192 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 250
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 251 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 293
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 294 AIILERIE 301
>pdb|4G3G|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) V408l Bound To A 2-(aminothiazolyl)phenol (cmp3)
Length = 350
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/206 (29%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAYYY 382
LG+G+FG ++ + G AVK+ V + FR E++ + +VPL Y
Sbjct: 80 LGRGSFGEVHRMKDKQTGFQCAVKK-----VRLEVFRVEELVACAGLSSPRIVPL---YG 131
Query: 383 SRDEKLLVHDYMPM---GSLSALLHGNRGAGRTPLNWETRSGLALG-ASRAIAYLHSKGP 438
+ E V+ +M + GSL L+ + G P E R+ LG A + YLH++
Sbjct: 132 AVREGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLEYLHTR-- 183
Query: 439 ANSHGNIKSSNILLSKS-YEARISDFGLAHLASPSS------TPNRIDG---YRAPEVTD 488
HG++K+ N+LLS A + DFG A P T + I G + APEV
Sbjct: 184 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 243
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
+ K D++S ++L +L G P
Sbjct: 244 GKPCDAKVDIWSSCCMMLHMLNGCHP 269
>pdb|3MY0|A Chain A, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|B Chain B, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|C Chain C, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|D Chain D, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|E Chain E, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|F Chain F, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|G Chain G, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|H Chain H, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|I Chain I, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|J Chain J, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|K Chain K, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|L Chain L, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|M Chain M, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|N Chain N, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|O Chain O, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|P Chain P, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|Q Chain Q, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|R Chain R, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|S Chain S, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|T Chain T, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|U Chain U, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|V Chain V, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|W Chain W, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
pdb|3MY0|X Chain X, Crystal Structure Of The Acvrl1 (Alk1) Kinase Domain Bound
To Ldn- 193189
Length = 305
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 59/215 (27%), Positives = 96/215 (44%), Gaps = 35/215 (16%)
Query: 320 ASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGS--MDHENLVPL 377
A E +GKG +G ++ L G VAVK + E+ + + E+ + + H+N++
Sbjct: 11 ALVECVGKGRYGEVWRG-LWHGESVAVKIFS--SRDEQSWFRETEIYNTVLLRHDNILGF 67
Query: 378 RAYYY----SRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
A S + L+ Y GSL L R L LA+ A+ +A+L
Sbjct: 68 IASDMTSRNSSTQLWLITHYHEHGSLYDFLQ------RQTLEPHLALRLAVSAACGLAHL 121
Query: 434 HSK------GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------- 480
H + PA +H + KS N+L+ + + I+D GLA + S S I
Sbjct: 122 HVEIFGTQGKPAIAHRDFKSRNVLVKSNLQCCIADLGLAVMHSQGSDYLDIGNNPRVGTK 181
Query: 481 -YRAPEV------TDARKVSQKADVYSFGVLLLEL 508
Y APEV TD + + D+++FG++L E+
Sbjct: 182 RYMAPEVLDEQIRTDCFESYKWTDIWAFGLVLWEI 216
>pdb|3O8P|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
pdb|3MPA|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I FGLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILGFGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EJN|A Chain A, Crystal Structure Of Autoinhibited Form Of Akt1 In Complex
With N-(4-
(5-(3-Acetamidophenyl)-2-(2-Aminopyridin-3-Yl)-3h-
Imidazo[4,5- B]pyridin-3-Yl)benzyl)-3-Fluorobenzamide
Length = 446
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRLK-DVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K LK +V V++ E + V+ + H L
Sbjct: 154 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 210
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L L R E R+ GA A+ Y
Sbjct: 211 TALKYSFQTHDRLCFVMEYANGGELFFHLSRERVFS------EDRARF-YGAEIVSALDY 263
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + ++K N++L K +I+DFGL A + + TP Y AP
Sbjct: 264 LHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKTFCGTPE----YLAP 318
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 319 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 348
>pdb|1IR3|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With Peptide Substrate And Atp Analog
pdb|1GAG|A Chain A, Crystal Structure Of The Insulin Receptor Kinase In
Complex With A Bisubstrate Inhibitor
Length = 306
Score = 54.3 bits (129), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGYR 482
YL++K H ++ + N +++ + +I DFG+ + P R +
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---WM 199
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
APE + +D++SFGV+L E+ + + P Q L NE+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|2Z8C|A Chain A, Phosphorylated Insulin Receptor Tyrosine Kinase In Complex
With (4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin-2-
Yl]amino}phenyl)acetic Acid
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 96/221 (43%), Gaps = 28/221 (12%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 22 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 81
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 82 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 141
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGYR 482
YL++K H ++ + N +++ + +I DFG+ + P R +
Sbjct: 142 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---WM 196
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
APE + +D++SFGV+L E+ + + P Q L NE+
Sbjct: 197 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 237
>pdb|3BHT|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHT|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 3
pdb|3BHU|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHU|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
WITH THE Inhibitor Meriolin 5
pdb|3BHV|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3BHV|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Variolin B
pdb|3MY5|A Chain A, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3MY5|C Chain C, Cdk2CYCLINA IN COMPLEX WITH DRB
pdb|3TNW|A Chain A, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|3TNW|C Chain C, Structure Of Cdk2CYCLIN A IN COMPLEX WITH CAN508
pdb|4BCO|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCO|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 300
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 66
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 122
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 123 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|2YJS|A Chain A, Structure Of C1156y Mutant Anaplastic Lymphoma Kinase
Length = 342
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 26 NYCFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 85
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 86 VYSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 145
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 146 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 205
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 206 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 264
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 265 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 307
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 308 AIILERIE 315
>pdb|3BHY|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With A Beta-Carboline Ligand
pdb|3BQR|A Chain A, Crystal Structure Of Human Death Associated Protein Kinase
3 (Dapk3) In Complex With An Imidazo-Pyridazine Ligand
Length = 283
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G A K +K VS +E ++ ++ + H N+
Sbjct: 11 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLSSSRRGVSREEIEREVNILREIRHPNI 70
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + ++ + +L+ + + G L L A + L + + + YLH
Sbjct: 71 ITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYLH 125
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
SK A H ++K NI LL K+ ++ DFG+AH + I G + APE+
Sbjct: 126 SKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 183
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 184 NYEPLGLEADMWSIGVITYILLSGASP 210
>pdb|2J90|A Chain A, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
pdb|2J90|B Chain B, Crystal Structure Of Human Zip Kinase In Complex With A
Tetracyclic Pyridone Inhibitor (pyridone 6)
Length = 304
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/207 (26%), Positives = 93/207 (44%), Gaps = 22/207 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHENL 374
E LG G F K + G A K +K VS +E ++ ++ + H N+
Sbjct: 32 EELGSGQFAIVRKCRQKGTGKEYAAKFIKKRRLXSSRRGVSREEIEREVNILREIRHPNI 91
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + ++ + +L+ + + G L L A + L + + + YLH
Sbjct: 92 ITLHDIFENKTDVVLILELVSGGELFDFL-----AEKESLTEDEATQFLKQILDGVHYLH 146
Query: 435 SKGPANSHGNIKSSNI-LLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRAPEVT 487
SK A H ++K NI LL K+ ++ DFG+AH + I G + APE+
Sbjct: 147 SKRIA--HFDLKPENIMLLDKNVPNPRIKLIDFGIAHKIEAGNEFKNIFGTPEFVAPEIV 204
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
+ + +AD++S GV+ LL+G +P
Sbjct: 205 NYEPLGLEADMWSIGVITYILLSGASP 231
>pdb|4I3Z|A Chain A, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
pdb|4I3Z|C Chain C, Structure Of Pcdk2CYCLINA BOUND TO ADP AND 2 MAGNESIUM
IONS
Length = 296
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 64
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 120
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 121 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3D5W|A Chain A, Crystal Structure Of A Phosphorylated Polo-Like Kinase 1
(Plk1) Catalytic Domain In Complex With Adp
Length = 317
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 32/230 (13%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRA 379
LGKG F Y+ T ++ V A K + + + +EKM + S+D+ ++V
Sbjct: 50 LGKGGFAKCYEITDMDTKEVFAGKVVPKSMLLKPHQKEKMSTEIAIHKSLDNPHVVGFHG 109
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ D +V + SL L H R A P E R + + + YLH+
Sbjct: 110 FFEDDDFVYVVLEICRRRSLLEL-HKRRKAVTEP---EARYFMR-QTIQGVQYLHNN--R 162
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLA--------HLASPSSTPNRIDGYRAPEVTDARK 491
H ++K N+ L+ + +I DFGLA TPN Y APEV +
Sbjct: 163 VIHRDLKLGNLFLNDDMDVKIGDFGLATKIEFDGERKKXLCGTPN----YIAPEVLCKKG 218
Query: 492 VSQKADVYSFGVLLLELLTGKAP--------TQALLNEEGVDLPRWVQSV 533
S + D++S G +L LL GK P T + + +PR + V
Sbjct: 219 HSFEVDIWSLGCILYTLLVGKPPFETSCLKETYIRIKKNEYSVPRHINPV 268
>pdb|1JST|A Chain A, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JST|C Chain C, Phosphorylated Cyclin-Dependent Kinase-2 Bound To Cyclin A
pdb|1JSU|A Chain A, P27(Kip1)CYCLIN ACDK2 COMPLEX
pdb|1FQ1|B Chain B, Crystal Structure Of Kinase Associated Phosphatase (Kap)
In Complex With Phospho-Cdk2
pdb|2C6T|A Chain A, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2C6T|C Chain C, Crystal Structure Of The Human Cdk2 Complexed With The
Triazolopyrimidine Inhibitor
pdb|2CJM|A Chain A, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2CJM|C Chain C, Mechanism Of Cdk Inhibition By Active Site
Phosphorylation: Cdk2 Y15p T160p In Complex With Cyclin
A Structure
pdb|2UZB|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZB|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZD|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZE|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|A Chain A, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|2UZL|C Chain C, Crystal Structure Of Human Cdk2 Complexed With A
Thiazolidinone Inhibitor
pdb|4II5|A Chain A, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
pdb|4II5|C Chain C, Structure Of Pcdk2/cyclina Bound To Adp And 1 Magnesium
Ion
Length = 298
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 64
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 120
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 121 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 178
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3IW4|A Chain A, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|B Chain B, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
pdb|3IW4|C Chain C, Crystal Structure Of Pkc Alpha In Complex With Nvp-Aeb071
Length = 360
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 93/203 (45%), Gaps = 21/203 (10%)
Query: 324 VLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFREKM---EVVGSMDHEN-LV 375
VLGKG+FG K T E+ + +K KDV + + + M V+ +D L
Sbjct: 26 VLGKGSFGKVMLADRKGTEELYAIKILK--KDVVIQDDDVECTMVEKRVLALLDKPPFLT 83
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + + D V +Y+ G L + G + P + +++G + +LH
Sbjct: 84 QLHSCFQTVDRLYFVMEYVNGGDLMYHIQ-QVGKFKEPQAVFYAAEISIG----LFFLHK 138
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA--HLASPSSTPNRI--DGYRAPEVTDARK 491
+G + ++K N++L +I+DFG+ H+ +T Y APE+ +
Sbjct: 139 RGII--YRDLKLDNVMLDSEGHIKIADFGMCKEHMMDGVTTREFCGTPDYIAPEIIAYQP 196
Query: 492 VSQKADVYSFGVLLLELLTGKAP 514
+ D +++GVLL E+L G+ P
Sbjct: 197 YGKSVDWWAYGVLLYEMLAGQPP 219
>pdb|1JNK|A Chain A, The C-Jun N-Terminal Kinase (Jnk3s) Complexed With
Mgamp-Pnp
Length = 423
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 93/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A L+ VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 74 AQGIVCAAYDAVLDRN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIISLLNVF 130
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 131 TPQKTLEEFQDVYLVMELMDANL---CQVIQMELDHERMSYLLYQMLCGIKHLHSAGII- 186
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S TP + YRAPEV + D
Sbjct: 187 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMTPYVVTRYYRAPEVILGMGYKENVD 245
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 246 IWSVGCIMGEMVRHK 260
>pdb|2JGZ|A Chain A, Crystal Structure Of Phospho-Cdk2 In Complex With Cyclin B
Length = 289
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 122
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H4L|A Chain A, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
pdb|1H4L|B Chain B, Structure And Regulation Of The Cdk5-P25(Nck5a) Complex
Length = 292
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/205 (26%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPL 377
E +G+GT+GT +KA E +VA+KR++ D V RE + ++ + H+N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE-ICLLKELKHKNIVRL 66
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+S + LV ++ L G L+ E + + + HS+
Sbjct: 67 HDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT-DA 489
H ++K N+L++++ E +++DFGLA P R YR P+V A
Sbjct: 122 VL--HRDLKPQNLLINRNGELKLADFGLARAF---GIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
+ S D++S G + EL P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAARP 201
>pdb|1QMZ|A Chain A, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1QMZ|C Chain C, Phosphorylated Cdk2-Cyclyin A-Substrate Peptide Complex
pdb|1GY3|A Chain A, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1GY3|C Chain C, Pcdk2CYCLIN A IN COMPLEX WITH MGADP, NITRATE AND PEPTIDE
SUBSTRATE
pdb|1P5E|A Chain A, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|1P5E|C Chain C, The Strucure Of Phospho-Cdk2CYCLIN A IN COMPLEX WITH THE
Inhibitor 4,5,6,7-Tetrabromobenzotriazole (Tbs)
pdb|2CCH|A Chain A, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCH|C Chain C, The Crystal Structure Of Cdk2 Cyclin A In Complex With A
Substrate Peptide Derived From Cdc Modified With A
Gamma- Linked Atp Analogue
pdb|2CCI|A Chain A, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2CCI|C Chain C, Crystal Structure Of Phospho-Cdk2 Cyclin A In Complex With
A Peptide Containing Both The Substrate And Recruitment
Sites Of Cdc6
pdb|2G9X|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|2G9X|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
COMPLEX WITH THE Inhibitor Nu6271
pdb|3DDP|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDP|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Cr8
pdb|3DDQ|A Chain A, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DDQ|C Chain C, Structure Of Phosphorylated Thr160 Cdk2CYCLIN A IN COMPLEX
With The Inhibitor Roscovitine
pdb|3DOG|A Chain A, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
pdb|3DOG|C Chain C, Structure Of Thr 160 Phosphorylated Cdk2CYCLIN A IN
Complex With The Inhibitor N-&-N1
Length = 299
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 65
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 121
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 122 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3VN9|A Chain A, Rifined Crystal Structure Of Non-Phosphorylated Map2k6 In
A Putative Auto-Inhibition State
Length = 340
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 56/218 (25%), Positives = 106/218 (48%), Gaps = 23/218 (10%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGS 368
+A DLE ++ LG+G +G K + G ++AVKR++ S+++ R M++ S
Sbjct: 49 KADDLEPIME-----LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 103
Query: 369 MDHENLVPLRAYYYS---RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG 425
M + P +Y R+ + + + SL G+T + + +A+
Sbjct: 104 MRTVD-CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT-IPEDILGKIAVS 161
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDG---- 480
+A+ +LHSK + H ++K SN+L++ + ++ DFG++ +L S ID
Sbjct: 162 IVKALEHLHSKL-SVIHRDVKPSNVLINALGQVKMCDFGISGYLV--DSVAKTIDAGCKP 218
Query: 481 YRAPEVTDA----RKVSQKADVYSFGVLLLELLTGKAP 514
Y APE + + S K+D++S G+ ++EL + P
Sbjct: 219 YMAPERINPELNQKGYSVKSDIWSLGITMIELAILRFP 256
>pdb|1OGU|A Chain A, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OGU|C Chain C, Structure Of Human Thr160-phospho Cdk2/cyclin A Complexed
With A
2-arylamino-4-cyclohexylmethyl-5-nitroso-6-
aminopyrimidine Inhibitor
pdb|1OI9|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OI9|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIU|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
pdb|1OIY|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With A 6-Cyclohexylmethyloxy-2-Anilino-Purine Inhibitor
Length = 302
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 68
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 69 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 124
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 125 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4EOQ|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
pdb|4EOQ|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With Atp
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 68
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 69 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 124
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 125 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4BCQ|A Chain A, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCQ|C Chain C, Structure Of Cdk2 In Complex With Cyclin A And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 301
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 67
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 123
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 124 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|1E9H|A Chain A, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1E9H|C Chain C, Thr 160 Phosphorylated Cdk2-Human Cyclin A3 Complex With
The Inhibitor Indirubin-5-Sulphonate Bound
pdb|1PKD|A Chain A, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
pdb|1PKD|C Chain C, The Crystal Structure Of Ucn-01 In Complex With Phospho-
Cdk2CYCLIN A
Length = 297
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 122
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 123 --RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H1P|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1P|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu2058
pdb|1H1Q|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1Q|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6094
pdb|1H1R|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1R|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6086
pdb|1H1S|A Chain A, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H1S|C Chain C, Structure Of Human Thr160-Phospho Cdk2CYCLIN A COMPLEXED
With The Inhibitor Nu6102
pdb|1H24|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H24|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH A 9 RESIDUE RECRUITMENT
Peptide From E2f
pdb|1H25|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H25|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From Retinoblastoma-Associated Protein
pdb|1H26|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H26|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P53
pdb|1H27|A Chain A, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H27|C Chain C, Cdk2CYCLIN A IN COMPLEX WITH AN 11-Residue Recruitment
Peptide From P27
pdb|1H28|A Chain A, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|1H28|C Chain C, Cdk2/cyclin A In Complex With An 11-residue Recruitment
Peptide From P107
pdb|2WMA|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMA|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|A Chain A, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
pdb|2WMB|C Chain C, Structural And Thermodynamic Consequences Of Cyclization
Of Peptide Ligands For The Recruitment Site Of Cyclin A
Length = 303
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 11 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 69
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 70 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 125
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 126 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 183
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 184 YYSTAVDIWSLGCIFAEMVTRRA 206
>pdb|4DCE|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4DCE|B Chain B, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With A Piperidine-Carboxamide Inhibitor
pdb|4FOD|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 36
Length = 333
Score = 53.9 bits (128), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 71/308 (23%), Positives = 119/308 (38%), Gaps = 40/308 (12%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 18 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 77
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 78 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 137
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 138 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 197
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 198 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 256
Query: 519 LNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSM 578
N+E ++ F R + + ++ C P++RP+
Sbjct: 257 SNQEVLE-----------------FVTSGGRMDPPKNCPGPVYRIMTQCWQHQPEDRPNF 299
Query: 579 AEVTSQIE 586
A + +IE
Sbjct: 300 AIILERIE 307
>pdb|3MH0|A Chain A, Mutagenesis Of P38 Map Kinase Eshtablishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3O8T|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg-Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I D GLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDAGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|4EOS|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
pdb|4EOS|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 67
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 123
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 124 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|3QHR|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHR|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|A Chain A, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
pdb|3QHW|C Chain C, Structure Of A Pcdk2CYCLINA TRANSITION-State Mimic
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 66
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 122
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 123 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|3FE3|A Chain A, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
pdb|3FE3|B Chain B, Crystal Structure Of The Kinase Mark3PAR-1: T211a-S215a
Double Mutant
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 323 EVLGKGTFGTAYKAT-----LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A E+ I + K + T +K FRE + ++ ++H N+V L
Sbjct: 21 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFRE-VRIMKILNHPNIVKL 79
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ L+ +Y G + L + GR E RS S A+ Y H K
Sbjct: 80 FEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMK-EKEARSKFRQIVS-AVQYCHQKR 134
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVS- 493
H ++K+ N+LL +I+DFG ++ + + G Y APE+ +K
Sbjct: 135 IV--HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDAFCGAPPYAAPELFQGKKYDG 192
Query: 494 QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 193 PEVDVWSLGVILYTLVSGSLP 213
>pdb|1W98|A Chain A, The Structural Basis Of Cdk2 Activation By Cyclin E
pdb|4EOR|A Chain A, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
pdb|4EOR|C Chain C, Thr 160 Phosphorylated Cdk2 Wt - Human Cyclin A3 Complex
With The Inhibitor Nu6102
Length = 298
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 65
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 121
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 122 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 179
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|4EOO|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
pdb|4EOO|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With Atp
Length = 299
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 8 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 66
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 67 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 122
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 123 H--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 180
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 181 YYSTAVDIWSLGCIFAEMVTRRA 203
>pdb|4EOP|A Chain A, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOP|C Chain C, Thr 160 Phosphorylated Cdk2 Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 300
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 9 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 67
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 68 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 123
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 124 H--RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 181
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 182 YYSTAVDIWSLGCIFAEMVTRRA 204
>pdb|2QNJ|A Chain A, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
pdb|2QNJ|B Chain B, Kinase And Ubiquitin-Associated Domains Of Mark3PAR-1
Length = 328
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 90/201 (44%), Gaps = 17/201 (8%)
Query: 323 EVLGKGTFGTAYKAT-----LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A E+ I + K + T +K FRE + ++ ++H N+V L
Sbjct: 18 KTIGKGNFAKVKLARHILTGREVAIKIIDKTQLNPTSLQKLFRE-VRIMKILNHPNIVKL 76
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ L+ +Y G + L + GR E RS S A+ Y H K
Sbjct: 77 FEVIETEKTLYLIMEYASGGEVFDYLVAH---GRMK-EKEARSKFRQIVS-AVQYCHQKR 131
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVS- 493
H ++K+ N+LL +I+DFG ++ + + G Y APE+ +K
Sbjct: 132 IV--HRDLKAENLLLDADMNIKIADFGFSNEFTVGGKLDTFCGSPPYAAPELFQGKKYDG 189
Query: 494 QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 190 PEVDVWSLGVILYTLVSGSLP 210
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 53.9 bits (128), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/233 (24%), Positives = 101/233 (43%), Gaps = 31/233 (13%)
Query: 350 KDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
K++ +E ++ ++ S+DH N++ L + + LV ++ G L +
Sbjct: 84 KNIEKFHEEIYNEISLLKSLDHPNIIKLFDVFEDKKYFYLVTEFYEGGELFEQI-----I 138
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKS---YEARISDFGLA 466
R + + + I YLH H +IK NILL +I DFGL+
Sbjct: 139 NRHKFDECDAANIMKQILSGICYLHKHNIV--HRDIKPENILLENKNSLLNIKIVDFGLS 196
Query: 467 HLASPSSTPNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEG 523
S G Y APEV +K ++K DV+S GV++ LL G P N++
Sbjct: 197 SFFSKDYKLRDRLGTAYYIAPEVL-KKKYNEKCDVWSCGVIMYILLCGYPPFGG-QNDQD 254
Query: 524 VDLPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAIN------CTAQ 570
+ ++ V K ++ + D ++N+ +E +L++L + CTA+
Sbjct: 255 I-----IKKVEKGKYYFDFND-----WKNISDEAKELIKLMLTYDYNKRCTAE 297
>pdb|3O17|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O17|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform
pdb|3O2M|A Chain A, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
pdb|3O2M|B Chain B, Crystal Structure Of Jnk1-Alpha1 Isoform Complex With A
Biaryl Tetrazol (A-82118)
Length = 370
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S P + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 IWSVGCIMGEMVCHK 222
>pdb|1GII|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|1GIJ|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
pdb|2DS1|A Chain A, Human Cyclin Dependent Kinase 2 Complexed With The Cdk4
Inhibitor
Length = 298
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 64
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 65 KLLDVIHTENKLYLVFEHV-HQDLKTFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 120
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 121 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|3MH3|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBJ|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
Length = 360
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I D GLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDRGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3BKB|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)
pdb|3CBL|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (v- Fes) In Complex With Staurosporine And A
Consensus Peptide
pdb|4E93|A Chain A, Crystal Structure Of Human Feline Sarcoma Viral Oncogene
Homologue (V- Fes)in Complex With Tae684
Length = 377
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 100/226 (44%), Gaps = 18/226 (7%)
Query: 307 KGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE--KEFREKM 363
K + EDL+ E +G+G FG + L +VAVK ++ + +F ++
Sbjct: 106 KDKWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 364 EVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLA 423
++ H N+V L + +V + + G L GA L +T +
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR-TEGAR---LRVKTLLQMV 219
Query: 424 LGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH------LASPSSTPNR 477
A+ + YL SK H ++ + N L+++ +ISDFG++ A+
Sbjct: 220 GDAAAGMEYLESK--CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVYAASGGLRQV 277
Query: 478 IDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
+ APE + + S ++DV+SFG+LL E + G +P L N++
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|1ZMW|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
pdb|1ZMW|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
T208aS212A INACTIVE DOUBLE MUTANT
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAVK + ++ +K FRE + ++ ++H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ LV +Y G + L + GR E R+ S A+ Y H K
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVS-AVQYCHQKF 133
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTDARK 491
H ++K+ N+LL +I+DFG ++ + N++D Y APE+ +K
Sbjct: 134 IV--HRDLKAENLLLDADMNIKIADFG---FSNEFTFGNKLDAFCGAPPYAAPELFQGKK 188
Query: 492 VS-QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 189 YDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|3ALN|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|B Chain B, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALN|C Chain C, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Complexed With Amp-Pnp
pdb|3ALO|A Chain A, Crystal Structure Of Human Non-Phosphorylated Mkk4 Kinase
Domain Ternary Complex With Amp-Pnp And P38 Peptide
pdb|3VUT|A Chain A, Crystal Structures Of Non-Phosphorylated Map2k4
pdb|3VUT|B Chain B, Crystal Structures Of Non-Phosphorylated Map2k4
Length = 327
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 96/216 (44%), Gaps = 20/216 (9%)
Query: 311 AFDLEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKME----V 365
A DL+DL +G+G +G+ K + G ++AVKR++ TV EKE ++ + V
Sbjct: 21 AEDLKDLGE-----IGRGAYGSVNKMVHKPSGQIMAVKRIRS-TVDEKEQKQLLMDLDVV 74
Query: 366 VGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG 425
+ S D +V + + + + M S + E + L
Sbjct: 75 MRSSDCPYIVQFYGALFREGDCWICMELMST-SFDKFYKYVYSVLDDVIPEEILGKITLA 133
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YR 482
+A+ +L + H +IK SNILL +S ++ DFG++ S R G Y
Sbjct: 134 TVKALNHL-KENLKIIHRDIKPSNILLDRSGNIKLCDFGISGQLVDSIAKTRDAGCRPYM 192
Query: 483 APEVTDARKVSQ----KADVYSFGVLLLELLTGKAP 514
APE D Q ++DV+S G+ L EL TG+ P
Sbjct: 193 APERIDPSASRQGYDVRSDVWSLGITLYELATGRFP 228
>pdb|3CD3|A Chain A, Crystal Structure Of Phosphorylated Human Feline Sarcoma
Viral Oncogene Homologue (V-Fes) In Complex With
Staurosporine And A Consensus Peptide
Length = 377
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 56/226 (24%), Positives = 103/226 (45%), Gaps = 18/226 (7%)
Query: 307 KGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE--KEFREKM 363
K + EDL+ E +G+G FG + L +VAVK ++ + +F ++
Sbjct: 106 KDKWVLNHEDLV--LGEQIGRGNFGEVFSGRLRADNTLVAVKSCRETLPPDLKAKFLQEA 163
Query: 364 EVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLA 423
++ H N+V L + +V + + G L GA L +T +
Sbjct: 164 RILKQYSHPNIVRLIGVCTQKQPIYIVMELVQGGDFLTFLR-TEGAR---LRVKTLLQMV 219
Query: 424 LGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH-----LASPSSTPNRI 478
A+ + YL SK H ++ + N L+++ +ISDFG++ + + S ++
Sbjct: 220 GDAAAGMEYLESK--CCIHRDLAARNCLVTEKNVLKISDFGMSREEADGVXAASGGLRQV 277
Query: 479 D-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
+ APE + + S ++DV+SFG+LL E + G +P L N++
Sbjct: 278 PVKWTAPEALNYGRYSSESDVWSFGILLWETFSLGASPYPNLSNQQ 323
>pdb|4EOI|A Chain A, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
pdb|4EOI|C Chain C, Thr 160 Phosphorylated Cdk2 K89d, Q131e - Human Cyclin A3
Complex With The Inhibitor Ro3306
Length = 299
Score = 53.5 bits (127), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 100/202 (49%), Gaps = 17/202 (8%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLVP 376
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 8 VEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIVK 66
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 67 LLDVIHTENKLYLVFEFL-HQDLKDFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHSH 122
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDARK 491
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 123 --RVLHRDLKPENLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCKY 180
Query: 492 VSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 181 YSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3FME|A Chain A, Crystal Structure Of Human Mitogen-Activated Protein
Kinase Kinase 6 (Mek6) Activated Mutant (S207d, T211d)
Length = 290
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/221 (24%), Positives = 105/221 (47%), Gaps = 29/221 (13%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGS 368
+A DLE ++ LG+G +G K + G ++AVKR++ S+++ R M++ S
Sbjct: 5 KADDLEPIME-----LGRGAYGVVEKMRHVPSGQIMAVKRIRATVNSQEQKRLLMDLDIS 59
Query: 369 MDHENLVPLRAYYYS---RDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG 425
M + P +Y R+ + + + SL G+T + + +A+
Sbjct: 60 MRTVD-CPFTVTFYGALFREGDVWICMELMDTSLDKFYKQVIDKGQT-IPEDILGKIAVS 117
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL------------ASPSS 473
+A+ +LHSK + H ++K SN+L++ + ++ DFG++ P
Sbjct: 118 IVKALEHLHSKL-SVIHRDVKPSNVLINALGQVKMCDFGISGYLVDDVAKDIDAGCKPYM 176
Query: 474 TPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P RI+ PE+ + + S K+D++S G+ ++EL + P
Sbjct: 177 APERIN----PEL-NQKGYSVKSDIWSLGITMIELAILRFP 212
>pdb|4FOB|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 1
pdb|4FOC|A Chain A, Crystal Structure Of Human Anaplastic Lymphoma Kinase In
Complex With Acyliminobenzimidazole Inhibitor 2
Length = 353
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 62/248 (25%), Positives = 101/248 (40%), Gaps = 23/248 (9%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLE------MGIVVAVKRLKD 351
N F GK DL+++ R + + LG G FG Y+ + + VAVK L +
Sbjct: 38 NYSFAGKTSSISDLKEVPRKNITLIRGLGHGAFGEVYEGQVSGMPNDPSPLQVAVKTLPE 97
Query: 352 VTVSEKEFREKME--VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA 409
V + E ME ++ +H+N+V + ++ + M G L + L R
Sbjct: 98 VCSEQDELDFLMEALIISKFNHQNIVRCIGVSLQSLPRFILLELMAGGDLKSFLRETRPR 157
Query: 410 GRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLA 466
P + L + A + + H +I + N LL+ A+I DFG+A
Sbjct: 158 PSQPSSLAMLDLLHVARDIACGCQYLEENHFIHRDIAARNCLLTCPGPGRVAKIGDFGMA 217
Query: 467 HLASPSSTPNRIDG-------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQAL 518
+S R G + PE + K D +SFGVLL E+ + G P +
Sbjct: 218 RDIYRASY-YRKGGCAMLPVKWMPPEAFMEGIFTSKTDTWSFGVLLWEIFSLGYMPYPSK 276
Query: 519 LNEEGVDL 526
N+E ++
Sbjct: 277 SNQEVLEF 284
>pdb|1I44|A Chain A, Crystallographic Studies Of An Activation Loop Mutant Of
The Insulin Receptor Tyrosine Kinase
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 97/221 (43%), Gaps = 28/221 (12%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGYR 482
YL++K H ++ + N +++ + +I DFG+ ++ P R +
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGMTRDIYETAYYRKGGKGLLPVR---WM 199
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
APE + +D++SFGV+L E+ + + P Q L NE+
Sbjct: 200 APESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|2QR8|A Chain A, 2.0a X-ray Structure Of C-terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2 (rsk2)
pdb|4D9U|A Chain A, Rsk2 C-Terminal Kinase Domain, (E)-Tert-Butyl
3-(4-Amino-7-(3-
Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
pdb|4D9T|A Chain A, Rsk2 C-Terminal Kinase Domain With Inhibitor (E)-Methyl
3-(4-Amino-7-
(3-Hydroxypropyl)-5-P-Tolyl-7h-Pyrrolo[2,
3-D]pyrimidin-6-Yl)-2- Cyanoacrylate
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/211 (27%), Positives = 91/211 (43%), Gaps = 38/211 (18%)
Query: 323 EVLGKGTFGTA----YKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSM-DHENLVP 376
E +G G++ +KAT +E + + K +D T E++E++ H N++
Sbjct: 28 EDIGVGSYSVCKRCIHKATNMEFAVKIIDKSKRDPT-------EEIEILLRYGQHPNIIT 80
Query: 377 LRAYYYSRDEKLLVHDYMPMGSL-SALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L+ Y +V + M G L +L + R S + ++ + YLH+
Sbjct: 81 LKDVYDDGKYVYVVTELMKGGELLDKILRQKFFSEREA------SAVLFTITKTVEYLHA 134
Query: 436 KGPANSHGNIKSSNILL----SKSYEARISDFGLAH--------LASPSSTPNRIDGYRA 483
+G H ++K SNIL RI DFG A L +P T N + A
Sbjct: 135 QGVV--HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGLLMTPCYTAN----FVA 188
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
PEV + + D++S GVLL +LTG P
Sbjct: 189 PEVLERQGYDAACDIWSLGVLLYTMLTGYTP 219
>pdb|1OIT|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-dependent Kinase Inhibitors Identified Through
Structure-based Hybridisation
Length = 299
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 65
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +++ HS
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLSFCHS 121
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 122 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|3MH1|A Chain A, Mutagenesis Of P38 Map Kinase Establishes Key Roles Of
Phe169 In Function And Structural Dynamics And Reveals A
Novel Dfg-Out State
pdb|3OBG|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Mutants In
Response To Inhibitor Binding
pdb|3OC1|A Chain A, Conformational Plasticity Of P38 Map Kinase Dfg Motif
Mutants In Response To Inhibitor Binding
Length = 360
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 98/203 (48%), Gaps = 27/203 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G+ VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGLRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I D GLA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDGGLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGK 512
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGR 220
>pdb|3OCB|A Chain A, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OCB|B Chain B, Akt1 Kinase Domain With Pyrrolopyrimidine Inhibitor
pdb|3OW4|A Chain A, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3OW4|B Chain B, Discovery Of Dihydrothieno- And Dihydrofuropyrimidines As
Potent Pan Akt Inhibitors
pdb|3QKK|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKL|A Chain A, Spirochromane Akt Inhibitors
pdb|3QKM|A Chain A, Spirocyclic Sulfonamides As Akt Inhibitors
pdb|4EKK|A Chain A, Akt1 With Amp-Pnp
pdb|4EKK|B Chain B, Akt1 With Amp-Pnp
pdb|4EKL|A Chain A, Akt1 With Gdc0068
Length = 341
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRLK-DVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K LK +V V++ E + V+ + H L
Sbjct: 15 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 71
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L L R + E R+ GA A+ Y
Sbjct: 72 TALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARF-YGAEIVSALDY 124
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + ++K N++L K +I+DFGL A + TP Y AP
Sbjct: 125 LHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE----YLAP 179
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 180 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 209
>pdb|3C7Q|A Chain A, Structure Of Vegfr2 Kinase Domain In Complex With Bibf1120
Length = 316
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 73/298 (24%), Positives = 125/298 (41%), Gaps = 46/298 (15%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 37 LGRGAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA---------GRTPLNWETRSGLAL 424
V L L+V ++ G+LS L R + L E +
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKPEDLYKDFLTLEHLIXYSF 155
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-- 482
++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 156 QVAKGMEFLASR--KXIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDARLP 213
Query: 483 ----APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
APE R + ++DV+SFGVLL E+ + G +P + + EE
Sbjct: 214 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDEE 259
Query: 538 WTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 260 FCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|4GV1|A Chain A, Pkb Alpha In Complex With Azd5363
Length = 340
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRLK-DVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K LK +V V++ E + V+ + H L
Sbjct: 14 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 70
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L L R + E R+ GA A+ Y
Sbjct: 71 TALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARF-YGAEIVSALDY 123
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + ++K N++L K +I+DFGL A + TP Y AP
Sbjct: 124 LHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE----YLAP 178
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 179 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 208
>pdb|4FSU|A Chain A, Crystal Structure Of The Chk1
Length = 279
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 93/203 (45%), Gaps = 17/203 (8%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ LG+G G A E + V + +K + ++++ + ++HEN+V
Sbjct: 11 VQTLGEGAAGEVQLAVNRVTEEAVAVKIVDMKRAVDCPENIKKEICINKMLNHENVVKFY 70
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ + + L +Y G L + + G P R L A + YLH G
Sbjct: 71 GHRREGNIQYLFLEYCSGGELFDRIEPDIG---MPEPDAQRFFHQLMA--GVVYLHGIG- 124
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP---NRIDG---YRAPEVTDARKV 492
+H +IK N+LL + +ISDFGLA + ++ N++ G Y APE+ R+
Sbjct: 125 -ITHRDIKPENLLLDERDNLKISDFGLATVFRYNNRERLLNKMCGTLPYVAPELLKRREF 183
Query: 493 -SQKADVYSFGVLLLELLTGKAP 514
++ DV+S G++L +L G+ P
Sbjct: 184 HAEPVDVWSCGIVLTAMLAGELP 206
>pdb|2R0I|A Chain A, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
pdb|2R0I|B Chain B, Crystal Structure Of A Kinase Mark2PAR-1 Mutant
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAVK + ++ +K FRE + ++ ++H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ LV +Y G + L + GR E R+ S A+ Y H K
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVS-AVQYCHQKF 133
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVS- 493
H ++K+ N+LL +I+DFG ++ + + + G Y APE+ +K
Sbjct: 134 IV--HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 494 QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP 212
>pdb|3CQU|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3CQW|A Chain A, Crystal Structure Of Akt-1 Complexed With Substrate
Peptide And Inhibitor
pdb|3MV5|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
pdb|3MVH|A Chain A, Crystal Structure Of Akt-1-Inhibitor Complexes
Length = 342
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 61/210 (29%), Positives = 94/210 (44%), Gaps = 33/210 (15%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRLK-DVTVSEKEFREKM---EVVGSMDHENL 374
++LGKGTFG KAT G A+K LK +V V++ E + V+ + H L
Sbjct: 16 KLLGKGTFGKVILVKEKAT---GRYYAMKILKKEVIVAKDEVAHTLTENRVLQNSRHPFL 72
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS--RAIAY 432
L+ + + D V +Y G L L R + E R+ GA A+ Y
Sbjct: 73 TALKYSFQTHDRLCFVMEYANGGELFFHL------SRERVFSEDRARF-YGAEIVSALDY 125
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGL--------AHLASPSSTPNRIDGYRAP 484
LHS+ + ++K N++L K +I+DFGL A + TP Y AP
Sbjct: 126 LHSEKNV-VYRDLKLENLMLDKDGHIKITDFGLCKEGIKDGATMKXFCGTPE----YLAP 180
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
EV + + D + GV++ E++ G+ P
Sbjct: 181 EVLEDNDYGRAVDWWGLGVVMYEMMCGRLP 210
>pdb|1ZMU|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
pdb|1ZMU|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Wild Type
Length = 327
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAVK + ++ +K FRE + ++ ++H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ LV +Y G + L + GR E R+ S A+ Y H K
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVS-AVQYCHQKF 133
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVS- 493
H ++K+ N+LL +I+DFG ++ + + + G Y APE+ +K
Sbjct: 134 IV--HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 494 QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP 212
>pdb|1IRK|A Chain A, Crystal Structure Of The Tyrosine Kinase Domain Of The
Human Insulin Receptor
Length = 306
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 56/224 (25%), Positives = 96/224 (42%), Gaps = 34/224 (15%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 25 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 84
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 85 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 144
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR--------- 482
YL++K H ++ + N +++ + +I DFG+ + D YR
Sbjct: 145 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLPV 196
Query: 483 ---APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
APE + +D++SFGV+L E+ + + P Q L NE+
Sbjct: 197 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ 240
>pdb|2R5T|A Chain A, Crystal Structure Of Inactive Serum And Glucocorticoid-
Regulated Kinase 1 In Complex With Amp-Pnp
pdb|3HDM|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 1
pdb|3HDN|A Chain A, Crystal Structure Of Serum And Glucocorticoid-Regulated
Kinase 1 In Complex With Compound 2
Length = 373
Score = 53.1 bits (126), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 19/203 (9%)
Query: 323 EVLGKGTFGTAYKATLEMG-IVVAVKRLKDVTVSEKE-----FREKMEVVGSMDHENLVP 376
+V+GKG+FG A + + AVK L+ + +K+ E+ ++ ++ H LV
Sbjct: 44 KVIGKGSFGKVLLARHKAEEVFYAVKVLQKKAILKKKEEKHIMSERNVLLKNVKHPFLVG 103
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRAIAYLHS 435
L + + D+ V DY+ G L L R E R+ A + A+ YLHS
Sbjct: 104 LHFSFQTADKLYFVLDYINGGELFYHLQRERCF------LEPRARFYAAEIASALGYLHS 157
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSSTPNRIDGYRAPEVTDARK 491
+ ++K NILL ++DFGL S +ST Y APEV +
Sbjct: 158 LNIV--YRDLKPENILLDSQGHIVLTDFGLCKENIEHNSTTSTFCGTPEYLAPEVLHKQP 215
Query: 492 VSQKADVYSFGVLLLELLTGKAP 514
+ D + G +L E+L G P
Sbjct: 216 YDRTVDWWCLGAVLYEMLYGLPP 238
>pdb|3ETA|A Chain A, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
pdb|3ETA|B Chain B, Kinase Domain Of Insulin Receptor Complexed With A Pyrrolo
Pyridine Inhibitor
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 51/297 (17%)
Query: 325 LGKGTFGTAYKATL------EMGIVVAVKRLKD-VTVSEK-EFREKMEVVGSMDHENLVP 376
LG+G+FG Y+ E VAVK + + ++ E+ EF + V+ ++V
Sbjct: 24 LGQGSFGMVYEGNARDIIKGEAETRVAVKTVNESASLRERIEFLNEASVMKGFTCHHVVR 83
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNR-----GAGRTPLNWETRSGLALGASRAIA 431
L L+V + M G L + L R GR P + +A + +A
Sbjct: 84 LLGVVSKGQPTLVVMELMAHGDLKSYLRSLRPEAENNPGRPPPTLQEMIQMAAEIADGMA 143
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR--------- 482
YL++K H ++ + N +++ + +I DFG+ + D YR
Sbjct: 144 YLNAK--KFVHRDLAARNCMVAHDFTVKIGDFGM------TRDIYETDYYRKGGKGLLPV 195
Query: 483 ---APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEW 538
APE + +D++SFGV+L E+ + + P Q L NE+ V+K
Sbjct: 196 RWMAPESLKDGVFTTSSDMWSFGVVLWEITSLAEQPYQGLSNEQ----------VLKFVM 245
Query: 539 TAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
D + N E + L+++ C P RP+ E+ + +++ S +
Sbjct: 246 DGGYLD----QPDNCPERVTDLMRM---CWQFNPKMRPTFLEIVNLLKDDLHPSFPE 295
>pdb|1ZRZ|A Chain A, Crystal Structure Of The Catalytic Domain Of Atypical
Protein Kinase C-Iota
Length = 364
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 316 DLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE-----FREKMEVVGSM 369
DLLR V+G+G++ L+ + A+K +K V++ E EK +
Sbjct: 23 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 78
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+H LV L + + + V +Y+ G L + H R + L E + S A
Sbjct: 79 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 133
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLA-SPSSTPNRIDG---YRAPE 485
+ YLH +G + ++K N+LL +++D+G+ P T + G Y APE
Sbjct: 134 LNYLHERGII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 191
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ D ++ GVL+ E++ G++P
Sbjct: 192 ILRGEDYGFSVDWWALGVLMFEMMAGRSP 220
>pdb|3KXX|A Chain A, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|B Chain B, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|C Chain C, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
pdb|3KXX|D Chain D, Structure Of The Mutant Fibroblast Growth Factor Receptor
1
Length = 317
Score = 53.1 bits (126), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 74/297 (24%), Positives = 125/297 (42%), Gaps = 56/297 (18%)
Query: 325 LGKGTFGTAYKATLEMGI---------VVAVKRLKDVTVSEKEFR------EKMEVVGSM 369
LG+G FG A +G+ VAVK LK +EK+ E M+++G
Sbjct: 36 LGEGAFGQVVLAE-AIGLDKDKPNRVTKVAVKMLKS-DATEKDLSDLISEMEMMKMIGK- 92
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWET 418
H+N++ L ++ +Y G+L L G L+ +
Sbjct: 93 -HKNIINLLGACTQDGPLYVIVEYASKGNLREYLQAREPPGLEYSYNPSHNPEEQLSSKD 151
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSST 474
A +R + YL SK H ++ + N+L+++ +I+DFGLA H+ T
Sbjct: 152 LVSCAYQVARGMEYLASK--KCIHRDLAARNVLVTEDNVMKIADFGLARDIHHIDYYKKT 209
Query: 475 PN-RID-GYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQ 531
N R+ + APE R + ++DV+SFGVLL E+ T G +P + EE L
Sbjct: 210 TNGRLPVKWMAPEALFDRIYTHQSDVWSFGVLLWEIFTLGGSPYPGVPVEELFKL----- 264
Query: 532 SVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEI 588
+KE + + N E+ +++ +C P RP+ ++ ++ I
Sbjct: 265 --LKEGHRMD-------KPSNCTNELYMMMR---DCWHAVPSQRPTFKQLVEDLDRI 309
>pdb|1Y8G|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
pdb|1Y8G|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
Inactive Double Mutant With Selenomethionine
Length = 327
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 92/206 (44%), Gaps = 27/206 (13%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAVK + ++ +K FRE + + ++H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIXKVLNHPNIVKL 78
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ LV +Y G + L HG E R+ S A+ Y H
Sbjct: 79 FEVIETEKTLYLVXEYASGGEVFDYLVAHGRXKEK------EARAKFRQIVS-AVQYCHQ 131
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTDA 489
K H ++K+ N+LL +I+DFG ++ + N++D Y APE+
Sbjct: 132 KFIV--HRDLKAENLLLDADXNIKIADFG---FSNEFTFGNKLDAFCGAPPYAAPELFQG 186
Query: 490 RKVS-QKADVYSFGVLLLELLTGKAP 514
+K + DV+S GV+L L++G P
Sbjct: 187 KKYDGPEVDVWSLGVILYTLVSGSLP 212
>pdb|2IW8|A Chain A, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
pdb|2IW8|C Chain C, Structure Of Human Thr160-Phospho Cdk2-Cyclin A F82h-L83v-
H84d Mutant With An O6-Cyclohexylmethylguanine Inhibitor
Length = 302
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/203 (27%), Positives = 100/203 (49%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+K+++ T +E RE + ++ ++H N+V
Sbjct: 10 KVEKIGEGTYGVVYKARNKLTGEVVALKKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 68
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 69 KLLDVIHTENKLYLVFEHVDQ-DLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 124
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 125 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYXHEVVTLWYRAPEILLGCK 182
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 183 YYSTAVDIWSLGCIFAEMVTRRA 205
>pdb|4G3F|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 2-(aminothiazoly)phenol (cmp2)
Length = 336
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAYYY 382
+G+G+FG ++ + G AVK+ V + FR E++ + +VPL Y
Sbjct: 66 VGRGSFGEVHRMKDKQTGFQCAVKK-----VRLEVFRVEELVACAGLSSPRIVPL---YG 117
Query: 383 SRDEKLLVHDYMPM---GSLSALLHGNRGAGRTPLNWETRSGLALG-ASRAIAYLHSKGP 438
+ E V+ +M + GSL L+ + G P E R+ LG A + YLH++
Sbjct: 118 AVREGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLEYLHTR-- 169
Query: 439 ANSHGNIKSSNILLSKS-YEARISDFGLAHLASPSS------TPNRIDG---YRAPEVTD 488
HG++K+ N+LLS A + DFG A P T + I G + APEV
Sbjct: 170 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 229
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
+ K D++S ++L +L G P
Sbjct: 230 GKPCDAKVDIWSSCCMMLHMLNGCHP 255
>pdb|2G01|A Chain A, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2G01|B Chain B, Pyrazoloquinolones As Novel, Selective Jnk1 Inhibitors
pdb|2GMX|A Chain A, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2GMX|B Chain B, Selective Aminopyridine-Based C-Jun N-Terminal Kinase
Inhibitors With Cellular Activity
pdb|2H96|A Chain A, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2H96|B Chain B, Discovery Of Potent, Highly Selective, And Orally
Bioavailable Pyridine Carboxamide C-Jun Nh2-Terminal
Kinase Inhibitors
pdb|2NO3|A Chain A, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
pdb|2NO3|B Chain B, Novel 4-Anilinopyrimidines As Potent Jnk1 Inhibitors
Length = 370
Score = 52.8 bits (125), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 92/195 (47%), Gaps = 16/195 (8%)
Query: 326 GKGTFGTAYKATLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRAYY 381
+G AY A LE VA+K+L ++ T +++ +RE + ++ ++H+N++ L +
Sbjct: 36 AQGIVCAAYDAILERN--VAIKKLSRPFQNQTHAKRAYRE-LVLMKCVNHKNIIGLLNVF 92
Query: 382 YSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN 440
+ D Y+ M + A L + L+ E S L I +LHS G
Sbjct: 93 TPQKSLEEFQDVYIVMELMDANLCQ---VIQMELDHERMSYLLYQMLCGIKHLHSAGII- 148
Query: 441 SHGNIKSSNILLSKSYEARISDFGLAHLASPS--STPNRIDG-YRAPEVTDARKVSQKAD 497
H ++K SNI++ +I DFGLA A S P + YRAPEV + D
Sbjct: 149 -HRDLKPSNIVVKSDCTLKILDFGLARTAGTSFMMEPEVVTRYYRAPEVILGMGYKENVD 207
Query: 498 VYSFGVLLLELLTGK 512
++S G ++ E++ K
Sbjct: 208 LWSVGCIMGEMVCHK 222
>pdb|2P2H|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridinyl-Triazine Inhibitor
pdb|2QU5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzimidazole Inhibitor
pdb|2QU6|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|2QU6|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzoxazole Inhibitor
pdb|3B8Q|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8Q|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|3B8R|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Naphthamide Inhibitor
pdb|2RL5|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A 2,3-Dihydro-1,4-Benzoxazine Inhibitor
pdb|3BE2|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzamide Inhibitor
pdb|3CP9|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CP9|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPB|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPB|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Bisamide Inhibitor
pdb|3CPC|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3CPC|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridone Inhibitor
pdb|3DTW|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
pdb|3DTW|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Benzisoxazole Inhibitor
Length = 314
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 48/302 (15%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR 482
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 145 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 483 ------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
APE R + ++DV+SFGVLL E+ + G +P + +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 248
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 249 EEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
Query: 596 GQ 597
+
Sbjct: 307 DR 308
>pdb|4IC7|A Chain A, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC7|D Chain D, Crystal Structure Of The Erk5 Kinase Domain In Complex
With An Mkk5 Binding Fragment
pdb|4IC8|A Chain A, Crystal Structure Of The Apo Erk5 Kinase Domain
pdb|4IC8|B Chain B, Crystal Structure Of The Apo Erk5 Kinase Domain
Length = 442
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 309 DRAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLK---DVTVSEKEFREKME 364
D FD+ D E +G G +G A + G VA+K++ DV + K +++
Sbjct: 48 DVTFDVGDEYEI-IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 106
Query: 365 VVGSMDHENLVPLR------AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
++ H+N++ ++ Y +V D M L ++H ++ PL E
Sbjct: 107 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-----PLTLEH 160
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPN 476
R + Y+HS H ++K SN+L++++ E +I DFG+A SP+
Sbjct: 161 VRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 218
Query: 477 RID------GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
+ YRAPE+ + +Q D++S G + E+L +
Sbjct: 219 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 261
>pdb|2Y94|A Chain A, Structure Of An Active Form Of Mammalian Ampk
Length = 476
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 57/206 (27%), Positives = 93/206 (45%), Gaps = 26/206 (12%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVK-----RLKDVTVSEKEFREKMEVVGSMDHENLVP 376
+ LG GTFG E+ G VAVK +++ + V K R +++ + H +++
Sbjct: 22 DTLGVGTFGKVKVGKHELTGHKVAVKILNRQKIRSLDVVGK-IRREIQNLKLFRHPHIIK 80
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L + + +V +Y+ G L + N GR L+ + L + Y H
Sbjct: 81 LYQVISTPSDIFMVMEYVSGGELFDYICKN---GR--LDEKESRRLFQQILSGVDYCHRH 135
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-------TPNRIDGYRAPEVTDA 489
H ++K N+LL A+I+DFGL+++ S +PN Y APEV
Sbjct: 136 MVV--HRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRXSCGSPN----YAAPEVISG 189
Query: 490 RKVS-QKADVYSFGVLLLELLTGKAP 514
R + + D++S GV+L LL G P
Sbjct: 190 RLYAGPEVDIWSSGVILYALLCGTLP 215
>pdb|4G3C|A Chain A, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3C|B Chain B, Crystal Structure Of Apo Murine Nf-kappab Inducing Kinase
(nik)
pdb|4G3E|A Chain A, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
pdb|4G3E|B Chain B, Crystal Structure Of Murine Nf-kappab Inducing Kinase
(nik) Bound To A 6-alkynylindoline (cmp1)
Length = 352
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 60/206 (29%), Positives = 95/206 (46%), Gaps = 32/206 (15%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFR-EKMEVVGSMDHENLVPLRAYYY 382
+G+G+FG ++ + G AVK+ V + FR E++ + +VPL Y
Sbjct: 82 VGRGSFGEVHRMKDKQTGFQCAVKK-----VRLEVFRVEELVACAGLSSPRIVPL---YG 133
Query: 383 SRDEKLLVHDYMPM---GSLSALLHGNRGAGRTPLNWETRSGLALG-ASRAIAYLHSKGP 438
+ E V+ +M + GSL L+ + G P E R+ LG A + YLH++
Sbjct: 134 AVREGPWVNIFMELLEGGSLGQLI---KQMGCLP---EDRALYYLGQALEGLEYLHTR-- 185
Query: 439 ANSHGNIKSSNILLSKS-YEARISDFGLAHLASPSS------TPNRIDG---YRAPEVTD 488
HG++K+ N+LLS A + DFG A P T + I G + APEV
Sbjct: 186 RILHGDVKADNVLLSSDGSRAALCDFGHALCLQPDGLGKSLLTGDYIPGTETHMAPEVVM 245
Query: 489 ARKVSQKADVYSFGVLLLELLTGKAP 514
+ K D++S ++L +L G P
Sbjct: 246 GKPCDAKVDIWSSCCMMLHMLNGCHP 271
>pdb|3ZH8|A Chain A, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|B Chain B, A Novel Small Molecule Apkc Inhibitor
pdb|3ZH8|C Chain C, A Novel Small Molecule Apkc Inhibitor
Length = 349
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 316 DLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE-----FREKMEVVGSM 369
DLLR V+G+G++ L+ + A+K +K V++ E EK +
Sbjct: 8 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 63
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+H LV L + + + V +Y+ G L + H R + L E + S A
Sbjct: 64 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 118
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLA-SPSSTPNRIDG---YRAPE 485
+ YLH +G + ++K N+LL +++D+G+ P T + G Y APE
Sbjct: 119 LNYLHERGII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 176
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ D ++ GVL+ E++ G++P
Sbjct: 177 ILRGEDYGFSVDWWALGVLMFEMMAGRSP 205
>pdb|3KMU|A Chain A, Crystal Structure Of The IlkALPHA-Parvin Core Complex
(Apo)
Length = 271
Score = 52.8 bits (125), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 52/189 (27%), Positives = 83/189 (43%), Gaps = 14/189 (7%)
Query: 342 IVVAVKRLKDV-TVSEKEFREKMEVVGSMDHENLVPLRAYYYSRD--EKLLVHDYMPMGS 398
IVV V +++D T ++F E+ + H N++P+ S L+ + P GS
Sbjct: 36 IVVKVLKVRDWSTRKSRDFNEECPRLRIFSHPNVLPVLGACQSPPAPHPTLITHWXPYGS 95
Query: 399 LSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEA 458
L +LH G ++ AL +R A+LH+ P + S ++ + + A
Sbjct: 96 LYNVLH--EGTNFV-VDQSQAVKFALDXARGXAFLHTLEPLIPRHALNSRSVXIDEDXTA 152
Query: 459 RISDFGLAHLASPSSTPNRI--DGYRAPEVTDARKVS---QKADVYSFGVLLLELLTGKA 513
RIS A + +P R + APE + + AD +SF VLL EL+T +
Sbjct: 153 RIS---XADVKFSFQSPGRXYAPAWVAPEALQKKPEDTNRRSADXWSFAVLLWELVTREV 209
Query: 514 PTQALLNEE 522
P L N E
Sbjct: 210 PFADLSNXE 218
>pdb|1UA2|A Chain A, Crystal Structure Of Human Cdk7
pdb|1UA2|B Chain B, Crystal Structure Of Human Cdk7
pdb|1UA2|C Chain C, Crystal Structure Of Human Cdk7
pdb|1UA2|D Chain D, Crystal Structure Of Human Cdk7
Length = 346
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 97/203 (47%), Gaps = 27/203 (13%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE-------FREKMEVVGSMDHENL 374
+ LG+G F T YKA + +VA+K++K SE + RE ++++ + H N+
Sbjct: 16 DFLGEGQFATVYKARDKNTNQIVAIKKIKLGHRSEAKDGINRTALRE-IKLLQELSHPNI 74
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
+ L + + LV D+M L ++ N TP + + + L + + YLH
Sbjct: 75 IGLLDAFGHKSNISLVFDFMET-DLEVIIKDN-SLVLTPSHIKAYMLMTL---QGLEYLH 129
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-------IDGYRAPEVT 487
H ++K +N+LL ++ +++DFG LA +PNR YRAPE+
Sbjct: 130 QHWIL--HRDLKPNNLLLDENGVLKLADFG---LAKSFGSPNRAYXHQVVTRWYRAPELL 184
Query: 488 -DARKVSQKADVYSFGVLLLELL 509
AR D+++ G +L ELL
Sbjct: 185 FGARMYGVGVDMWAVGCILAELL 207
>pdb|3A8W|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8W|B Chain B, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|A Chain A, Crystal Structure Of Pkciota Kinase Domain
pdb|3A8X|B Chain B, Crystal Structure Of Pkciota Kinase Domain
Length = 345
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 53/209 (25%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 316 DLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEF-----REKMEVVGSM 369
DLLR V+G+G++ L+ + A+K +K V++ E EK +
Sbjct: 12 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMKVVKKELVNDDEDIDWVQTEKHVFEQAS 67
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+H LV L + + + V +Y+ G L + H R + L E + S A
Sbjct: 68 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 122
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLA-SPSSTPNRIDG---YRAPE 485
+ YLH +G + ++K N+LL +++D+G+ P T + G Y APE
Sbjct: 123 LNYLHERGII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSXFCGTPNYIAPE 180
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ D ++ GVL+ E++ G++P
Sbjct: 181 ILRGEDYGFSVDWWALGVLMFEMMAGRSP 209
>pdb|3GI3|A Chain A, Crystal Structure Of A N-Phenyl-N'-Naphthylurea Analog In
Complex With P38 Map Kinase
Length = 360
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 97/204 (47%), Gaps = 27/204 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLV---- 375
+G G +G+ A + G VAVK+L + + +++ +RE + ++ M HEN++
Sbjct: 30 VGSGAYGSVCAAFDTKTGHRVAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 88
Query: 376 ---PLRAYYYSRDEKLLVHDYMPMGS-LSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
P R+ D L+ H MG+ L+ ++ + L + L R +
Sbjct: 89 VFTPARSLEEFNDVYLVTH---LMGADLNNIVKCQK------LTDDHVQFLIYQILRGLK 139
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DA 489
Y+HS H ++K SN+ +++ E +I DF LA H + YRAPE+ +
Sbjct: 140 YIHSADII--HRDLKPSNLAVNEDCELKILDFYLARHTDDEMTGYVATRWYRAPEIMLNW 197
Query: 490 RKVSQKADVYSFGVLLLELLTGKA 513
+Q D++S G ++ ELLTG+
Sbjct: 198 MHYNQTVDIWSVGCIMAELLTGRT 221
>pdb|2WZJ|A Chain A, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|B Chain B, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|C Chain C, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|D Chain D, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|E Chain E, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
pdb|2WZJ|F Chain F, Catalytic And Uba Domain Of Kinase Mark2(PAR-1) K82r,
T208e Double Mutant
Length = 327
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAV+ + ++ +K FRE + ++ ++H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ LV +Y G + L + GR E R+ S A+ Y H K
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVS-AVQYCHQKF 133
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVS- 493
H ++K+ N+LL +I+DFG ++ + + + G Y APE+ +K
Sbjct: 134 IV--HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDEFCGSPPYAAPELFQGKKYDG 191
Query: 494 QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP 212
>pdb|2HAK|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|C Chain C, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|D Chain D, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|E Chain E, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|F Chain F, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|G Chain G, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
pdb|2HAK|H Chain H, Catalytic And Ubiqutin-Associated Domains Of Mark1PAR-1
Length = 328
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/204 (27%), Positives = 94/204 (46%), Gaps = 23/204 (11%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAVK + ++ +K FRE + ++ ++H N+V L
Sbjct: 21 KTIGKGNFAKVKLARHVLTGREVAVKIIDKTQLNPTSLQKLFRE-VRIMKILNHPNIVKL 79
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ LV +Y G + L + GR E R+ S A+ Y H K
Sbjct: 80 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVS-AVQYCHQKY 134
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------YRAPEVTDARK 491
H ++K+ N+LL +I+DFG ++ + N++D Y APE+ +K
Sbjct: 135 IV--HRDLKAENLLLDGDMNIKIADFG---FSNEFTVGNKLDTFCGSPPYAAPELFQGKK 189
Query: 492 VS-QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 190 YDGPEVDVWSLGVILYTLVSGSLP 213
>pdb|3IEC|A Chain A, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|B Chain B, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|C Chain C, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
pdb|3IEC|D Chain D, Helicobacter Pylori Caga Inhibits Par1MARK FAMILY KINASES
BY Mimicking Host Substrates
Length = 319
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 93/207 (44%), Gaps = 29/207 (14%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAVK + ++ +K FRE + ++ ++H N+V L
Sbjct: 13 KTIGKGNFAKVKLARHILTGKEVAVKIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 71
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNW----ETRSGLALGASRAIA 431
+ LV +Y G + L HG W E R+ S A+
Sbjct: 72 FEVIETEKTLYLVMEYASGGEVFDYLVAHG----------WMKEKEARAKFRQIVS-AVQ 120
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTD 488
Y H K H ++K+ N+LL +I+DFG ++ + + + G Y APE+
Sbjct: 121 YCHQKFIV--HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQ 178
Query: 489 ARKVS-QKADVYSFGVLLLELLTGKAP 514
+K + DV+S GV+L L++G P
Sbjct: 179 GKKYDGPEVDVWSLGVILYTLVSGSLP 205
>pdb|3SRV|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.4 bits (124), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 11 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 124
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL--AHLASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL A A + + G + A
Sbjct: 125 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENXYKAQTHGKWPVKWYA 182
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|2OGV|A Chain A, Crystal Structure Of The Autoinhibited Human C-Fms Kinase
Domain
Length = 317
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 51/292 (17%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVT-VSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK EKE +++++ + HEN
Sbjct: 44 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 103
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA------GRTPLNWETRSGLALGAS 427
+V L L++ +Y G L L A GR PL + +
Sbjct: 104 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQVA 162
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH---------LASPSSTPNRI 478
+ +A+L SK H ++ + N+LL+ + A+I DFGLA + + P +
Sbjct: 163 QGMAFLASKNCI--HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK- 219
Query: 479 DGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+ APE + ++DV+S+G+LL E+ + G P +L
Sbjct: 220 --WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----------------- 260
Query: 538 WTAEVFDLELLRYQNVEEEMV--QLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++ + L YQ + + + C A P +RP+ ++ S ++E
Sbjct: 261 -NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 311
>pdb|4DFL|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A Sulfonamidopyrazine Piperidine Inhibitor
pdb|4DFN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
An Adamantylpyrazine Inhibitor
Length = 274
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 7 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 66
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 67 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 120
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL--AHLASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL A A + + G + A
Sbjct: 121 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 178
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 179 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 218
>pdb|2P2I|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|2P2I|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Nicotinamide Inhibitor
pdb|3EFL|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
pdb|3EFL|B Chain B, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Motesanib
Length = 314
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 73/302 (24%), Positives = 126/302 (41%), Gaps = 48/302 (15%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 85 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR 482
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 145 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 202
Query: 483 ------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
APE R + ++DV+SFGVLL E+ + G +P + +
Sbjct: 203 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 248
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 249 EEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 306
Query: 596 GQ 597
+
Sbjct: 307 DR 308
>pdb|1OIR|A Chain A, Imidazopyridines: A Potent And Selective Class Of
Cyclin-Dependent Kinase Inhibitors Identified Through
Structure-Based Hybridisation
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+ +++ T +E RE + ++ ++H N+V
Sbjct: 7 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 65
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 66 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 121
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 122 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 179
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 180 YYSTAVDIWSLGCIFAEMVTRRA 202
>pdb|1H01|A Chain A, Cdk2 In Complex With A Disubstituted 2, 4-Bis Anilino
Pyrimidine Cdk4 Inhibitor
Length = 298
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 99/203 (48%), Gaps = 17/203 (8%)
Query: 321 SAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSE----KEFREKMEVVGSMDHENLV 375
E +G+GT+G YKA ++ G VVA+ +++ T +E RE + ++ ++H N+V
Sbjct: 6 KVEKIGEGTYGVVYKARNKLTGEVVALXKIRLDTETEGVPSTAIRE-ISLLKELNHPNIV 64
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L ++ ++ LV +++ L + + G PL +S L + +A+ HS
Sbjct: 65 KLLDVIHTENKLYLVFEFL-HQDLKKFMDASALTG-IPLPL-IKSYL-FQLLQGLAFCHS 120
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPSSTPNR---IDGYRAPEV-TDAR 490
H ++K N+L++ +++DFGLA P T YRAPE+ +
Sbjct: 121 H--RVLHRDLKPQNLLINTEGAIKLADFGLARAFGVPVRTYTHEVVTLWYRAPEILLGCK 178
Query: 491 KVSQKADVYSFGVLLLELLTGKA 513
S D++S G + E++T +A
Sbjct: 179 YYSTAVDIWSLGCIFAEMVTRRA 201
>pdb|4F4P|A Chain A, Syk In Complex With Ligand Lasw836
Length = 273
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 5 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 64
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 65 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 118
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL--AHLASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL A A + + G + A
Sbjct: 119 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 176
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 177 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 216
>pdb|4G31|A Chain A, Crystal Structure Of Gsk6414 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.28 A Resolution
pdb|4G34|A Chain A, Crystal Structure Of Gsk6924 Bound To Perk (R587-R1092,
Delete A660- T867) At 2.70 A Resolution
Length = 299
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 96/216 (44%), Gaps = 31/216 (14%)
Query: 323 EVLGKGTFGTAYKATLEMGIV-VAVKRLK--DVTVSEKEFREKMEVVGSMDHENLVPLRA 379
+ LG+G FG ++A ++ A+KR++ + ++ ++ +++ + ++H +V
Sbjct: 11 QCLGRGGFGVVFEAKNKVDDCNYAIKRIRLPNRELAREKVMREVKALAKLEHPGIVRYFN 70
Query: 380 YYYSRD--EKLL-----VHDYMPMGSLSALLHGNRGAGRTPLNWETRS---GLALGASRA 429
+ ++ EKL V+ Y+ M + GR + RS + L + A
Sbjct: 71 AWLEKNTTEKLQPSSPKVYLYIQMQLCRKENLKDWMNGRCTIEERERSVCLHIFLQIAEA 130
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH----------LASPSSTPNRID 479
+ +LHSKG H ++K SNI + ++ DFGL + +P R
Sbjct: 131 VEFLHSKGLM--HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTPMPAYARHT 188
Query: 480 G------YRAPEVTDARKVSQKADVYSFGVLLLELL 509
G Y +PE S K D++S G++L ELL
Sbjct: 189 GQVGTKLYMSPEQIHGNSYSHKVDIFSLGLILFELL 224
>pdb|4B99|A Chain A, Crystal Structure Of Mapk7 (Erk5) With Inhibitor
Length = 398
Score = 52.4 bits (124), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 55/223 (24%), Positives = 99/223 (44%), Gaps = 28/223 (12%)
Query: 309 DRAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLK---DVTVSEKEFREKME 364
D FD+ D E +G G +G A + G VA+K++ DV + K +++
Sbjct: 47 DVTFDVGDEYEI-IETIGNGAYGVVSSARRRLTGQQVAIKKIPNAFDVVTNAKRTLRELK 105
Query: 365 VVGSMDHENLVPLR------AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
++ H+N++ ++ Y +V D M L ++H ++ PL E
Sbjct: 106 ILKHFKHDNIIAIKDILRPTVPYGEFKSVYVVLDLM-ESDLHQIIHSSQ-----PLTLEH 159
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPN 476
R + Y+HS H ++K SN+L++++ E +I DFG+A SP+
Sbjct: 160 VRYFLYQLLRGLKYMHSA--QVIHRDLKPSNLLVNENCELKIGDFGMARGLCTSPAEHQY 217
Query: 477 RIDG------YRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
+ YRAPE+ + +Q D++S G + E+L +
Sbjct: 218 FMTEYVATRWYRAPELMLSLHEYTQAIDLWSVGCIFGEMLARR 260
>pdb|3LCO|A Chain A, Inhibitor Bound To A Dfg-Out Structure Of The Kinase
Domain Of Csf-1r
Length = 324
Score = 52.0 bits (123), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 70/304 (23%), Positives = 124/304 (40%), Gaps = 62/304 (20%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVT-VSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK EKE +++++ + HEN
Sbjct: 37 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 96
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSL--------SALLHGNRGAGRTPLNWETRSGLAL- 424
+V L L++ +Y G L A+L + G+ P + G L
Sbjct: 97 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEAMLGPSLAPGQDPEGLDKEDGRPLE 156
Query: 425 ---------GASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH-------- 467
++ +A+L SK H ++ + N+LL+ + A+I DFGLA
Sbjct: 157 LRDLLHFSSQVAQGMAFLASKNCI--HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNY 214
Query: 468 -LASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVD 525
+ + P + + APE + ++DV+S+G+LL E+ + G P +L
Sbjct: 215 IVKGNARLPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----- 266
Query: 526 LPRWVQSVVKEEWTAEVFDLELLRYQNVEEEMV--QLLQLAINCTAQYPDNRPSMAEVTS 583
++ + L YQ + + + C A P +RP+ ++ S
Sbjct: 267 -------------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICS 313
Query: 584 QIEE 587
++E
Sbjct: 314 FLQE 317
>pdb|1ZMV|A Chain A, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
pdb|1ZMV|B Chain B, Catalytic And Ubiqutin-Associated Domains Of Mark2PAR-1:
K82r Mutant
Length = 327
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 55/201 (27%), Positives = 93/201 (46%), Gaps = 17/201 (8%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS----EKEFREKMEVVGSMDHENLVPL 377
+ +GKG F A + G VAV+ + ++ +K FRE + ++ ++H N+V L
Sbjct: 20 KTIGKGNFAKVKLARHILTGKEVAVRIIDKTQLNSSSLQKLFRE-VRIMKVLNHPNIVKL 78
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ LV +Y G + L + GR E R+ S A+ Y H K
Sbjct: 79 FEVIETEKTLYLVMEYASGGEVFDYLVAH---GRMK-EKEARAKFRQIVS-AVQYCHQKF 133
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVS- 493
H ++K+ N+LL +I+DFG ++ + + + G Y APE+ +K
Sbjct: 134 IV--HRDLKAENLLLDADMNIKIADFGFSNEFTFGNKLDTFCGSPPYAAPELFQGKKYDG 191
Query: 494 QKADVYSFGVLLLELLTGKAP 514
+ DV+S GV+L L++G P
Sbjct: 192 PEVDVWSLGVILYTLVSGSLP 212
>pdb|1YWN|A Chain A, Vegfr2 In Complex With A Novel
4-amino-furo[2,3-d]pyrimidine
Length = 316
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 48/300 (16%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR 482
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 154 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIXKDPDXVRKGDAR 211
Query: 483 ------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
APE R + ++DV+SFGVLL E+ + G +P + +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 257
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 258 EEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|3SRV|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase (Syk) In
Complex With A Diaminopyrimidine Carboxamide Inhibitor
Length = 277
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 11 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 70
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 71 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 124
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL--AHLASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL A A + + G + A
Sbjct: 125 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 182
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 183 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 222
>pdb|1XBA|A Chain A, Crystal Structure Of Apo Syk Tyrosine Kinase Domain
pdb|1XBB|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Gleevec
pdb|1XBC|A Chain A, Crystal Structure Of The Syk Tyrosine Kinase Domain With
Staurosporin
pdb|3FQE|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
Ym193306
pdb|3FQH|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQH|B Chain B, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
A 2-Substituted 7-Azaindole
pdb|3FQS|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
R406
pdb|4FL1|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
pdb|4FYN|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
3-(8-{4-
[ethyl-(2-hydroxy-ethyl)-amino]-phenylamino}-imidazo[1,
2-a]pyrazin-5- Yl)-phenol
pdb|4FYO|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
N-{(s)-1-
[7-(3,4-dimethoxy-phenylamino)-thiazolo[5,
4-d]pyrimidin-5-yl]- Pyrrolidin-3-yl}-terephthalamic
Acid
pdb|4FZ6|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Complexed With
[6-((s)-2-
Methyl-pyrrolidin-1-yl)-pyridin-2-yl]-(6-phenyl-
imidazo[1,2- B]pyridazin-8-yl)-amine
Length = 291
Score = 52.0 bits (123), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 17 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 76
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 77 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 130
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL--AHLASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL A A + + G + A
Sbjct: 131 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 188
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 189 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 228
>pdb|1PME|A Chain A, Structure Of Penta Mutant Human Erk2 Map Kinase Complexed
With A Specific Inhibitor Of Human P38 Map Kinase
Length = 380
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 51 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 109
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + ++ L LL L+ + R + Y+HS
Sbjct: 110 IRAPTIEQMKDVYLVTHLMGADLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 162
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 163 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 220
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 221 NSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|1K3A|A Chain A, Structure Of The Insulin-Like Growth Factor 1 Receptor
Kinase
Length = 299
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 121/287 (42%), Gaps = 47/287 (16%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 18 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 76
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 77 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 136
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N ++++ + +I DFG+ + P R +
Sbjct: 137 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---W 191
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 192 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 237
Query: 541 EVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + +M LL+L C P RPS E+ S I+E
Sbjct: 238 -VMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKE 281
>pdb|3LCD|A Chain A, Inhibitor Bound To A Dfg-In Structure Of The Kinase Domain
Of Csf-1r
Length = 329
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 70/292 (23%), Positives = 121/292 (41%), Gaps = 51/292 (17%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVT-VSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK EKE +++++ + HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA------GRTPLNWETRSGLALGAS 427
+V L L++ +Y G L L A GR PL + +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKAEADLDKEDGR-PLELRDLLHFSSQVA 170
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH---------LASPSSTPNRI 478
+ +A+L SK H ++ + N+LL+ + A+I DFGLA + + P +
Sbjct: 171 QGMAFLASKNCI--HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLPVK- 227
Query: 479 DGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+ APE + ++DV+S+G+LL E+ + G P +L
Sbjct: 228 --WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV----------------- 268
Query: 538 WTAEVFDLELLRYQNVEEEMV--QLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++ + L YQ + + + C A P +RP+ ++ S ++E
Sbjct: 269 -NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 319
>pdb|3U6J|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyrazolone Inhibitor
Length = 314
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 52/304 (17%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA P+ +
Sbjct: 145 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGD 200
Query: 481 ------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSV 533
+ APE R + ++DV+SFGVLL E+ + G +P +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------K 246
Query: 534 VKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++
Sbjct: 247 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
Query: 594 QQGQ 597
QQ +
Sbjct: 305 QQDR 308
>pdb|2ZOQ|A Chain A, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
pdb|2ZOQ|B Chain B, Structural Dissection Of Human Mitogen-Activated Kinase
Erk1
Length = 382
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 29/208 (13%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRL---KDVTVSEKEFREKMEVVGSMDHENLVPLR 378
+ +G+G +G A + VA+K++ + T ++ RE ++++ HEN++ +R
Sbjct: 49 QYIGEGAYGMVSSAYDHVRKTRVAIKKISPFEHQTYCQRTLRE-IQILLRFRHENVIGIR 107
Query: 379 -----AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
+ + + +V D M L LL + L+ + R + Y+
Sbjct: 108 DILRASTLEAMRDVYIVQDLMET-DLYKLLKSQQ------LSNDHICYFLYQILRGLKYI 160
Query: 434 HSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPE 485
HS AN H ++K SN+L++ + + +I DFGLA +A P YRAPE
Sbjct: 161 HS---ANVLHRDLKPSNLLINTTCDLKICDFGLARIADPEHDHTGFLTEXVATRWYRAPE 217
Query: 486 VT-DARKVSQKADVYSFGVLLLELLTGK 512
+ +++ ++ D++S G +L E+L+ +
Sbjct: 218 IMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|2GPH|A Chain A, Docking Motif Interactions In The Map Kinase Erk2
Length = 364
Score = 52.0 bits (123), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKCQH------LSNDHICYFLYQILRGLKYIHS- 146
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3TEI|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4H3P|D Chain D, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ + HEN++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLAFRHENIIGINDI 91
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 144
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|1UNG|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNG|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|A Chain A, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNH|B Chain B, Structural Mechanism For The Inhibition Of Cdk5-P25 By
Roscovitine, Aloisine And Indirubin.
pdb|1UNL|A Chain A, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|1UNL|B Chain B, Structural Mechanism For The Inhibition Of Cd5-P25 From
The Roscovitine, Aloisine And Indirubin.
pdb|3O0G|A Chain A, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
pdb|3O0G|B Chain B, Crystal Structure Of Cdk5:p25 In Complex With An Atp
Analogue
Length = 292
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 92/205 (44%), Gaps = 24/205 (11%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPL 377
E +G+GT+GT +KA E +VA+KR++ D V RE + ++ + H+N+V L
Sbjct: 8 EKIGEGTYGTVFKAKNRETHEIVALKRVRLDDDDEGVPSSALRE-ICLLKELKHKNIVRL 66
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+S + LV ++ L G L+ E + + + HS+
Sbjct: 67 HDVLHSDKKLTLVFEFCDQ-DLKKYFDSCNGD----LDPEIVKSFLFQLLKGLGFCHSRN 121
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-------YRAPEVT-DA 489
H ++K N+L++++ E ++++FGLA P R YR P+V A
Sbjct: 122 VL--HRDLKPQNLLINRNGELKLANFGLARAF---GIPVRCYSAEVVTLWYRPPDVLFGA 176
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
+ S D++S G + EL P
Sbjct: 177 KLYSTSIDMWSAGCIFAELANAGRP 201
>pdb|3R63|A Chain A, Structure Of Erk2 (Spe) Mutant (S246e)
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 87
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 140
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|3TUB|A Chain A, Crystal Structure Of Syk Kinase Domain With 1-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-3-((1r,2s)-2-
Phenylcyclopropyl)urea
Length = 293
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 27 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 86
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 140
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL+ A + + G + A
Sbjct: 141 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
>pdb|3ZUV|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
pdb|3ZUV|C Chain C, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Phosphorylated Map Kinase
Erk2
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 146
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 204
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3VF8|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Pyrazolylbenzimidazole Inhibitor 416
pdb|3VF9|A Chain A, Crystal Structure Of Spleen Tyrosine Kinase Syk Catalytic
Domain With Thienopyrazolylindole Inhibitor 027
pdb|3TUC|A Chain A, Crystal Structure Of Syk Kinase Domain With
1-Benzyl-N-(5-(6,7-
Dimethoxyquinolin-4-Yloxy)pyridin-2-Yl)-2-Oxo-1,
2-Dihydropyridine-3- Carboxamide
pdb|3TUD|A Chain A, Crystal Structure Of Syk Kinase Domain With
N-(4-Methyl-3-(8-Methyl-7-
Oxo-2-(Phenylamino)-7,8-Dihydropyrido[2,
3-D]pyrimidin-6-Yl)phenyl)-3- (Trifluoromethyl)benzamide
Length = 299
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 27 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 86
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 87 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 140
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL+ A + + G + A
Sbjct: 141 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 198
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 199 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 238
>pdb|2ERK|A Chain A, Phosphorylated Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 94
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 147
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLXEXVATRWYRAPEIML 205
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|3EWH|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Pyridyl-Pyrimidine Benzimidazole Inhibitor
Length = 314
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 72/304 (23%), Positives = 128/304 (42%), Gaps = 52/304 (17%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 26 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 84
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 85 VNLLGACTKPGGPLMVITEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 144
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA P+ +
Sbjct: 145 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGD 200
Query: 481 ------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSV 533
+ APE R + ++DV+SFGVLL E+ + G +P +
Sbjct: 201 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------K 246
Query: 534 VKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++
Sbjct: 247 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 304
Query: 594 QQGQ 597
QQ +
Sbjct: 305 QQDR 308
>pdb|3O71|A Chain A, Crystal Structure Of Erk2DCC PEPTIDE COMPLEX
Length = 358
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 29 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 87
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 88 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 140
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 141 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 198
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 199 NSKGYTKSIDIWSVGCILAEMLSNR 223
>pdb|1VR2|A Chain A, Human Vascular Endothelial Growth Factor Receptor 2 (Kdr)
Kinase Domain
Length = 316
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 48/300 (16%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR 482
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 154 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDXVRKGDAR 211
Query: 483 ------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
APE R + ++DV+SFGVLL E+ + G +P + +
Sbjct: 212 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 257
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 258 EEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 315
>pdb|4DC2|A Chain A, Structure Of Pkc In Complex With A Substrate Peptide From
Par-3
Length = 396
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/209 (24%), Positives = 93/209 (44%), Gaps = 21/209 (10%)
Query: 316 DLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE-----FREKMEVVGSM 369
DLLR V+G+G++ L+ + A++ +K V++ E EK +
Sbjct: 55 DLLR----VIGRGSYAKVLLVRLKKTDRIYAMRVVKKELVNDDEDIDWVQTEKHVFEQAS 110
Query: 370 DHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+H LV L + + + V +Y+ G L + H R + L E + S A
Sbjct: 111 NHPFLVGLHSCFQTESRLFFVIEYVNGGDL--MFHMQR---QRKLPEEHARFYSAEISLA 165
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLA-SPSSTPNRIDG---YRAPE 485
+ YLH +G + ++K N+LL +++D+G+ P T + G Y APE
Sbjct: 166 LNYLHERGII--YRDLKLDNVLLDSEGHIKLTDYGMCKEGLRPGDTTSTFCGTPNYIAPE 223
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ D ++ GVL+ E++ G++P
Sbjct: 224 ILRGEDYGFSVDWWALGVLMFEMMAGRSP 252
>pdb|3EMG|A Chain A, Discovery And Sar Of Novel 4-Thiazolyl-2-
Phenylaminopyrimidines As Potent Inhibitors Of Spleen
Tyrosine Kinase (Syk)
Length = 291
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 59/220 (26%), Positives = 94/220 (42%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 25 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 84
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + +LV + +G L+ L NR + L S +
Sbjct: 85 NPYIVRMIGIC-EAESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 138
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL--AHLASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL A A + + G + A
Sbjct: 139 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 196
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 197 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 236
>pdb|3DAE|A Chain A, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
pdb|3DAE|B Chain B, Crystal Structure Of Phosphorylated Snf1 Kinase Domain
Length = 283
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV--VGSMDHENLVP 376
+ LG+G+FG AY T + + + K + S+ + R + E+ + + H +++
Sbjct: 19 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 78
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L S+DE ++V +Y ++ ++ + + E R S A+ Y H
Sbjct: 79 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIIS-AVEYCHRH 132
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-------LASPSSTPNRIDGYRAPEVTDA 489
H ++K N+LL + +I+DFGL++ L + +PN Y APEV
Sbjct: 133 KIV--HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN----YAAPEVISG 186
Query: 490 RKVS-QKADVYSFGVLLLELLTGKAP 514
+ + + DV+S GV+L +L + P
Sbjct: 187 KLYAGPEVDVWSCGVILYVMLCRRLP 212
>pdb|3ZU7|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat
Protein In Complex With The Map Kinase Erk2
Length = 365
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 36 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 94
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 95 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 147
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 148 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 205
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 206 NSKGYTKSIDIWSVGCILAEMLSNR 230
>pdb|2Z7L|A Chain A, Unphosphorylated Mitogen Activated Protein Kinase Erk2 In
Complex With
(4-{[5-Carbamoyl-4-(3-Methylanilino)pyrimidin
2-Yl]amino}phenyl)acetic Acid
Length = 366
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 37 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 95
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 96 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 148
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 149 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 206
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 207 NSKGYTKSIDIWSVGCILAEMLSNR 231
>pdb|3C9W|A Chain A, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
pdb|3C9W|B Chain B, Crystal Structure Of Erk-2 With Hypothemycin Covalently
Bound
Length = 357
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 28 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 86
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 87 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 139
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 140 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 197
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 198 NSKGYTKSIDIWSVGCILAEMLSNR 222
>pdb|2FYS|B Chain B, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|2FYS|A Chain A, Crystal Structure Of Erk2 Complex With Kim Peptide Derived
From Mkp3
pdb|1ERK|A Chain A, Structure Of Signal-Regulated Kinase
pdb|3ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2SB220025
pdb|4ERK|A Chain A, The Complex Structure Of The Map Kinase Erk2OLOMOUCINE
pdb|3QYI|A Chain A, Map Kinase Erk2 Complexed With
1,1-Dioxo-2,3-Dihydrothiophen-3-Yl Benzenesulfonate
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 146
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|3HYH|A Chain A, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
pdb|3HYH|B Chain B, Crystal Structure Of The Protein Kinase Domain Of Yeast
Amp-Activated Protein Kinase Snf1
Length = 275
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV--VGSMDHENLVP 376
+ LG+G+FG AY T + + + K + S+ + R + E+ + + H +++
Sbjct: 18 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 77
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L S+DE ++V +Y ++ ++ + + E R S A+ Y H
Sbjct: 78 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIIS-AVEYCHRH 131
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-------LASPSSTPNRIDGYRAPEVTDA 489
H ++K N+LL + +I+DFGL++ L + +PN Y APEV
Sbjct: 132 KIV--HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN----YAAPEVISG 185
Query: 490 RKVS-QKADVYSFGVLLLELLTGKAP 514
+ + + DV+S GV+L +L + P
Sbjct: 186 KLYAGPEVDVWSCGVILYVMLCRRLP 211
>pdb|3QYW|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|3QYZ|A Chain A, Crystal Structure Of Erk2 In Complex With An Inhibitor
pdb|4GT3|A Chain A, Atp-Bound Form Of The Erk2 Kinase
pdb|4GVA|A Chain A, Adp-Bound Form Of The Erk2 Kinase
Length = 364
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 97/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ HEN++
Sbjct: 35 IGEGAYGMVCSAYDNLNKVRVAIKKISPFEHQTYCQRTLRE-IKILLRFRHENIIGINDI 93
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 94 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 146
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 147 --ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 204
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 205 NSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4AGC|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Axitinib (Ag-013736)
(N-Methyl-2-(
3-((E)-2-Pyridin-2-Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-
Benzamide)
pdb|4AGD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sunitinib (Su11248) (N-2-
Diethylaminoethyl)-5-((Z)-(5-Fluoro-2-Oxo-1h-Indol-3-
Ylidene)methyl)-2,4-Dimethyl-1h-Pyrrole-3-Carboxamide)
pdb|4ASD|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Sorafenib (Bay 43-9006)
pdb|4ASE|A Chain A, Crystal Structure Of Vegfr2 (Juxtamembrane And Kinase
Domains) In Complex With Tivozanib (Av-951)
Length = 353
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 48/300 (16%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 72 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 130
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 131 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 190
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR 482
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 191 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 248
Query: 483 ------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
APE R + ++DV+SFGVLL E+ + G +P + +
Sbjct: 249 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 294
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 295 EEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 352
>pdb|3DXN|A Chain A, Crystal Structure Of The Calcium-dependent Kinase From
Toxoplasma Gondii, 541.m00134, Kinase Domain
Length = 287
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 102/252 (40%), Gaps = 37/252 (14%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKE- 358
NL F G DR + LG G +G ++ G A+K +K +V+
Sbjct: 13 NLYFQGLSDRY--------QRVKKLGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSN 64
Query: 359 ---FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLN 415
+++ V+ +DH N++ L ++ + LV + G L + R +
Sbjct: 65 SGALLDEVAVLKQLDHPNIMKLYEFFEDKRNYYLVMEVYRGGELF-----DEIILRQKFS 119
Query: 416 WETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGL-AHLASP 471
+ + YLH H ++K N+LL SKS +A +I DFGL AH
Sbjct: 120 EVDAAVIMKQVLSGTTYLHKHNIV--HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVG 177
Query: 472 SSTPNRIDG--YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE------- 522
R+ Y APEV +K +K DV+S GV+L LL G P ++E
Sbjct: 178 GKMKERLGTAYYIAPEVL-RKKYDEKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEK 236
Query: 523 ---GVDLPRWVQ 531
D P W Q
Sbjct: 237 GKFSFDPPDWTQ 248
>pdb|4FUX|A Chain A, Crystal Structure Of The Erk2 Complexed With E75
pdb|4FV1|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek4
pdb|4FV2|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek5
pdb|4FV3|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek6
pdb|4FV4|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek7
pdb|4FV5|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek9
pdb|4FV8|A Chain A, Crystal Structure Of The Erk2 Complexed With E63
pdb|4FV9|A Chain A, Crystal Structure Of The Erk2 Complexed With E71
pdb|4G6N|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2FH9|A Chain A, Structure And Dimerization Of The Kinase Domain From Yeast
Snf1
Length = 274
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV--VGSMDHENLVP 376
+ LG+G+FG AY T + + + K + S+ + R + E+ + + H +++
Sbjct: 13 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 72
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L S+DE ++V +Y ++ ++ + + E R S A+ Y H
Sbjct: 73 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIIS-AVEYCHRH 126
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-------LASPSSTPNRIDGYRAPEVTDA 489
H ++K N+LL + +I+DFGL++ L + +PN Y APEV
Sbjct: 127 KIV--HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN----YAAPEVISG 180
Query: 490 RKVS-QKADVYSFGVLLLELLTGKAP 514
+ + + DV+S GV+L +L + P
Sbjct: 181 KLYAGPEVDVWSCGVILYVMLCRRLP 206
>pdb|3MN3|A Chain A, An Inhibited Conformation For The Protein Kinase Domain Of
The Saccharomyces Cerevisiae Ampk Homolog Snf1
Length = 271
Score = 51.6 bits (122), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/206 (24%), Positives = 95/206 (46%), Gaps = 25/206 (12%)
Query: 322 AEVLGKGTFGT---AYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV--VGSMDHENLVP 376
+ LG+G+FG AY T + + + K + S+ + R + E+ + + H +++
Sbjct: 9 VKTLGEGSFGKVKLAYHTTTGQKVALKIINKKVLAKSDMQGRIEREISYLRLLRHPHIIK 68
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
L S+DE ++V +Y ++ ++ + + E R S A+ Y H
Sbjct: 69 LYDVIKSKDEIIMVIEYAGNELFDYIVQRDKMSEQ-----EARRFFQQIIS-AVEYCHRH 122
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAH-------LASPSSTPNRIDGYRAPEVTDA 489
H ++K N+LL + +I+DFGL++ L + +PN Y APEV
Sbjct: 123 KIV--HRDLKPENLLLDEHLNVKIADFGLSNIMTDGNFLKTSCGSPN----YAAPEVISG 176
Query: 490 RKVS-QKADVYSFGVLLLELLTGKAP 514
+ + + DV+S GV+L +L + P
Sbjct: 177 KLYAGPEVDVWSCGVILYVMLCRRLP 202
>pdb|1ZY4|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY4|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant In Apo Form.
pdb|1ZY5|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp.
pdb|1ZY5|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: R794g
Hyperactivating Mutant Complexed With Amppnp
Length = 303
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 52/219 (23%), Positives = 90/219 (41%), Gaps = 39/219 (17%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
VLG+G FG KA + A+K+++ ++ ++ S++H+ +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 383 SR------------DEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
R L + +Y G+L L+H + W L A
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENGTLYDLIHSENLNQQRDEYWR----LFRQILEA 128
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG--------- 480
++Y+HS+G H ++K NI + +S +I DFGLA S ++D
Sbjct: 129 LSYIHSQGII--HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 481 ---------YRAPEVTDAR-KVSQKADVYSFGVLLLELL 509
Y A EV D ++K D+YS G++ E++
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|3LW0|A Chain A, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|B Chain B, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|C Chain C, Igf-1rk In Complex With Ligand Msc1609119a-1
pdb|3LW0|D Chain D, Igf-1rk In Complex With Ligand Msc1609119a-1
Length = 304
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 67/288 (23%), Positives = 124/288 (43%), Gaps = 49/288 (17%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 23 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 81
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R A P + +A + +
Sbjct: 82 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 141
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N ++++ + +I DFG+ + P R +
Sbjct: 142 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 196
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 197 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 242
Query: 541 EVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + N + + +L+++ C P RPS E+ S I+E
Sbjct: 243 -VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 286
>pdb|4H3Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 98/205 (47%), Gaps = 27/205 (13%)
Query: 325 LGKGTFGTAYKATLEMGIV-VAVKRL---KDVTVSEKEFREKMEVVGSMDHENLV----P 376
+G+G +G A + V VA+K++ + T ++ RE ++++ + HEN++
Sbjct: 33 IGEGAYGMVCSAYDNVNKVRVAIKKISPFEHQTYCQRTLRE-IKILLAFRHENIIGINDI 91
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSK 436
+RA + + + + + L LL L+ + R + Y+HS
Sbjct: 92 IRAPTIEQMKDVYIVQDLMETDLYKLLKTQH------LSNDHICYFLYQILRGLKYIHS- 144
Query: 437 GPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RIDGYRAPEVT- 487
AN H ++K SN+LL+ + + +I DFGLA +A P YRAPE+
Sbjct: 145 --ANVLHRDLKPSNLLLNTTSDLKICDFGLARVADPDHDHTGFLTEYVATRWYRAPEIML 202
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+++ ++ D++S G +L E+L+ +
Sbjct: 203 NSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|4FV7|A Chain A, Crystal Structure Of The Erk2 Complexed With E94
pdb|4G6O|A Chain A, Crystal Structure Of The Erk2
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1WZY|A Chain A, Crystal Structure Of Human Erk2 Complexed With A
Pyrazolopyridazine Derivative
pdb|3W55|A Chain A, The Structure Of Erk2 In Complex With Fr148083
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 143 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 199
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 200 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 233
>pdb|1TVO|A Chain A, The Structure Of Erk2 In Complex With A Small Molecule
Inhibitor
Length = 368
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|4GSB|A Chain A, Monoclinic Crystal Form Of The Apo-Erk2
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|2Y9Q|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
pdb|4FMQ|A Chain A, Crystal Structure Of Human Erk2 Complexed With A Mapk
Docking Peptide
Length = 362
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 137 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 193
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 194 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 227
>pdb|3SA0|A Chain A, Complex Of Erk2 With Norathyriol
pdb|4FUY|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek2
pdb|4FV0|A Chain A, Crystal Structure Of The Erk2 Complexed With Ek3
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTXDLKIXDFGLARVADPDHDHTGFLTEYVATR 191
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|1TKI|A Chain A, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
pdb|1TKI|B Chain B, Autoinhibited Serine Kinase Domain Of The Giant Muscle
Protein Titin
Length = 321
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/244 (24%), Positives = 103/244 (42%), Gaps = 31/244 (12%)
Query: 322 AEVLGKGTFGTAYKAT------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLV 375
AE LG+G FG ++ M V VK V V ++++ ++ H N++
Sbjct: 10 AEDLGRGEFGIVHRCVETSSKKTYMAKFVKVKGTDQVLV-----KKEISILNIARHRNIL 64
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + S +E +++ +++ L N A LN A+ +LHS
Sbjct: 65 HLHESFESMEELVMIFEFI--SGLDIFERINTSA--FELNEREIVSYVHQVCEALQFLHS 120
Query: 436 KGPANSHGNIKSSNILLS--KSYEARISDFGLAHLASPSSTPNRI---DGYRAPEVTDAR 490
H +I+ NI+ +S +I +FG A P + Y APEV
Sbjct: 121 HNIG--HFDIRPENIIYQTRRSSTIKIIEFGQARQLKPGDNFRLLFTAPEYYAPEVHQHD 178
Query: 491 KVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRY 550
VS D++S G L+ LL+G P A N++ +++++ E+T FD E +
Sbjct: 179 VVSTATDMWSLGTLVYVLLSGINPFLAETNQQ------IIENIMNAEYT---FDEEAFKE 229
Query: 551 QNVE 554
++E
Sbjct: 230 ISIE 233
>pdb|1GOL|A Chain A, Coordinates Of Rat Map Kinase Erk2 With An Arginine
Mutation At Position 52
Length = 364
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 139 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 195
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 196 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 229
>pdb|4FV6|A Chain A, Crystal Structure Of The Erk2 Complexed With E57
Length = 360
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 135 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 191
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 192 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 225
>pdb|2OJG|A Chain A, Crystal Structure Of Erk2 In Complex With
N,n-dimethyl-4-(4-
Phenyl-1h-pyrazol-3-yl)-1h-pyrrole-2-carboxamide
pdb|2OJI|A Chain A, Crystal Structure Of Erk2 In Complex With
N-Benzyl-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|2OJJ|A Chain A, Crystal Structure Of Erk2 In Complex With (S)-N-(1-(3-
Chloro-4-Fluorophenyl)-2-Hydroxyethyl)-4-(4-(3-
Chlorophenyl)-1h-Pyrazol-3-Yl)-1h-Pyrrole-2-Carboxamide
pdb|3I5Z|A Chain A, Crystal Structure Of Erk2 Bound To
(S)-N-(2-Hydroxy-1-Phenylethyl)-4-
(5-Methyl-2-(Phenylamino)pyrimidin-4-Yl)-1h-Pyrrole-2-
Carboxamide
pdb|3I60|A Chain A, Crystal Structure Of Erk2 Bound To
(s)-4-(2-(2-chlorophenylamino)-5-
Methylpyrimidin-4-yl)-n-(2-hydroxy-1-phenylethyl)-1h-
pyrrole-2- Carboxamide
Length = 380
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 53/94 (56%), Gaps = 12/94 (12%)
Query: 428 RAIAYLHSKGPANS-HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPN-------RID 479
R + Y+HS AN H ++K SN+LL+ + + +I DFGLA +A P
Sbjct: 155 RGLKYIHS---ANVLHRDLKPSNLLLNTTCDLKICDFGLARVADPDHDHTGFLTEYVATR 211
Query: 480 GYRAPEVT-DARKVSQKADVYSFGVLLLELLTGK 512
YRAPE+ +++ ++ D++S G +L E+L+ +
Sbjct: 212 WYRAPEIMLNSKGYTKSIDIWSVGCILAEMLSNR 245
>pdb|3VNT|A Chain A, Crystal Structure Of The Kinase Domain Of Human Vegfr2
With A [1, 3]thiazolo[5,4-B]pyridine Derivative
Length = 318
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 73/300 (24%), Positives = 125/300 (41%), Gaps = 48/300 (16%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 37 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 95
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 96 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKEAPEDLYKDFLTLEHLICY 155
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR 482
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA R R
Sbjct: 156 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDAR 213
Query: 483 ------APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVK 535
APE R + ++DV+SFGVLL E+ + G +P + +
Sbjct: 214 LPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KID 259
Query: 536 EEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 260 EEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 317
>pdb|3NYN|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYN|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Sangivamycin
pdb|3NYO|A Chain A, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
pdb|3NYO|B Chain B, Crystal Structure Of G Protein-Coupled Receptor Kinase 6
In Complex With Amp
Length = 576
Score = 51.2 bits (121), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRID--GYRAPEVTDARKVSQKADV 498
+ ++K NILL RISD GLA H+ + R+ GY APEV + + D
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 499 YSFGVLLLELLTGKAPTQ 516
++ G LL E++ G++P Q
Sbjct: 369 WALGCLLYEMIAGQSPFQ 386
>pdb|3OHT|A Chain A, Crystal Structure Of Salmo Salar P38alpha
pdb|3OHT|B Chain B, Crystal Structure Of Salmo Salar P38alpha
Length = 389
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 51/197 (25%), Positives = 94/197 (47%), Gaps = 13/197 (6%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRL----KDVTVSEKEFREKMEVVGSMDHENLVPLRA 379
+G G +G+ + ++ G+ +AVK+L + + +++ +RE + ++ M HEN++ L
Sbjct: 59 VGSGAYGSVCSSYDVKSGLKIAVKKLSRPFQSIIHAKRTYRE-LRLLKHMKHENVIGLLD 117
Query: 380 YYYSRDEKLLVHD-YMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+ +D Y+ + A L N L + L R + Y+HS
Sbjct: 118 VFTPATSLEEFNDVYLVTHLMGADL--NNIVKCQKLTDDHVQFLIYQILRGLKYIHSADI 175
Query: 439 ANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVT-DARKVSQKA 496
H ++K SN+ +++ E +I DFGLA H + YRAPE+ + +
Sbjct: 176 I--HRDLKPSNLAVNEDCELKILDFGLARHTDDEMTGYVATRWYRAPEIMLNWMHYNMTV 233
Query: 497 DVYSFGVLLLELLTGKA 513
D++S G ++ ELLTG+
Sbjct: 234 DIWSVGCIMAELLTGRT 250
>pdb|2XIR|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Pf-00337210 (N,2-Dimethyl-6-(7-(2-Morpholinoethoxy)
Quinolin-4-Yloxy)benzofuran-3-Carboxamide)
pdb|4AG8|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With Axitinib (Ag-013736)
(N-Methyl-2-(3-((E)-2-Pyridin-2-
Yl-Vinyl)-1h-Indazol-6-Ylsulfanyl)-Benzamide)
Length = 316
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 72/302 (23%), Positives = 127/302 (42%), Gaps = 52/302 (17%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATCRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-----------GRTPLNWETRSGL 422
V L L+V ++ G+LS L R + L E
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKVAPEDLYKDFLTLEHLICY 153
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG-- 480
+ ++ + +L S+ H ++ + NILLS+ +I DFGLA P+ +
Sbjct: 154 SFQVAKGMEFLASR--KCIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGD 209
Query: 481 ------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSV 533
+ APE R + ++DV+SFGVLL E+ + G +P +
Sbjct: 210 ARLPLKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------K 255
Query: 534 VKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSL 593
+ EE+ + E R + + ++ Q ++C P RP+ +E+ + + +++
Sbjct: 256 IDEEFCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANA 313
Query: 594 QQ 595
QQ
Sbjct: 314 QQ 315
>pdb|2ZM3|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|2ZM3|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And Isoquinolinedione Inhibitor
pdb|3F5P|A Chain A, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|B Chain B, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|C Chain C, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|D Chain D, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|E Chain E, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|F Chain F, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|G Chain G, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|H Chain H, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|I Chain I, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|J Chain J, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|K Chain K, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|M Chain M, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|L Chain L, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|R Chain R, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|S Chain S, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
pdb|3F5P|T Chain T, Complex Structure Of Insulin-Like Growth Factor Receptor
And 3- Cyanoquinoline Inhibitor
Length = 308
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 27 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N ++++ + +I DFG+ + P R +
Sbjct: 146 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIXETDXXRKGGKGLLPVR---W 200
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 246
Query: 541 EVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + N + + +L+++ C P RPS E+ S I+E
Sbjct: 247 -VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 290
>pdb|2P0C|A Chain A, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|2P0C|B Chain B, Catalytic Domain Of The Proto-Oncogene Tyrosine-Protein
Kina
pdb|3BRB|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BRB|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Tyrosine- Protein Kinase Mer In Complex
With Adp
pdb|3BPR|A Chain A, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|B Chain B, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|C Chain C, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3BPR|D Chain D, Crystal Structure Of Catalytic Domain Of The
Proto-Oncogene Protein Kinase Mer In Complex With
Inhibitor C52
pdb|3TCP|A Chain A, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
pdb|3TCP|B Chain B, Crystal Structure Of The Catalytic Domain Of The
Proto-Oncogene Tyrosine-Protein Kinase Mer In Complex
With Inhibitor Unc569
Length = 313
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 63/290 (21%), Positives = 121/290 (41%), Gaps = 39/290 (13%)
Query: 322 AEVLGKGTFGTAYKATLEM----GIVVAVKRLKDVTVSEKEFREKMEVVGSM---DHENL 374
++LG+G FG+ + L+ + VAVK +K S++E E + M H N+
Sbjct: 39 GKILGEGEFGSVMEGNLKQEDGTSLKVAVKTMKLDNSSQREIEEFLSEAACMKDFSHPNV 98
Query: 375 VPLRAYYYSRDEK-----LLVHDYMPMGSL-SALLHGNRGAGRTPLNWETRSGLALGASR 428
+ L + +++ +M G L + LL+ G + +T + +
Sbjct: 99 IRLLGVCIEMSSQGIPKPMVILPFMKYGDLHTYLLYSRLETGPKHIPLQTLLKFMVDIAL 158
Query: 429 AIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--LASPSSTPNRIDG----YR 482
+ YL ++ H ++ + N +L ++DFGL+ + RI +
Sbjct: 159 GMEYLSNRNFL--HRDLAARNCMLRDDMTVCVADFGLSKKIYSGDYYRQGRIAKMPVKWI 216
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAE 541
A E R + K+DV++FGV + E+ T G P + N E D
Sbjct: 217 AIESLADRVYTSKSDVWAFGVTMWEIATRGMTPYPGVQNHEMYD---------------- 260
Query: 542 VFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRS 591
+ L R + E+ + +L ++ +C P +RP+ + + Q+E++ S
Sbjct: 261 -YLLHGHRLKQPEDCLDELYEIMYSCWRTDPLDRPTFSVLRLQLEKLLES 309
>pdb|2ACX|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
pdb|2ACX|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 6
Bound To Amppnp
Length = 576
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/78 (35%), Positives = 42/78 (53%), Gaps = 3/78 (3%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRID--GYRAPEVTDARKVSQKADV 498
+ ++K NILL RISD GLA H+ + R+ GY APEV + + D
Sbjct: 309 YRDLKPENILLDDHGHIRISDLGLAVHVPEGQTIKGRVGTVGYMAPEVVKNERYTFSPDW 368
Query: 499 YSFGVLLLELLTGKAPTQ 516
++ G LL E++ G++P Q
Sbjct: 369 WALGCLLYEMIAGQSPFQ 386
>pdb|2WNT|A Chain A, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
pdb|2WNT|B Chain B, Crystal Structure Of The Human Ribosomal Protein S6 Kinase
Length = 330
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 323 EVLGKGTFG----TAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSM-DHENLVP 376
E +G G++ +KAT +E + V K S+++ E++E++ H N++
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDK-------SKRDPSEEIEILLRYGQHPNIIT 85
Query: 377 LRAYYYSRDEKLLVHDYMPMGSL-SALLHGNRGAGRTPLNWETRSGLALGA-SRAIAYLH 434
L+ Y LV + M G L +L R E + L + + YLH
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKIL-------RQKFFSEREASFVLHTIGKTVEYLH 138
Query: 435 SKGPANSHGNIKSSNILL---SKSYEA-RISDFGLAH--------LASPSSTPNRIDGYR 482
S+G H ++K SNIL S + E RI DFG A L +P T N +
Sbjct: 139 SQGVV--HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN----FV 192
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
APEV + + D++S G+LL +L G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|1P4O|A Chain A, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution.
pdb|1P4O|B Chain B, Structure Of Apo Unactivated Igf-1r Kinase Domain At 1.5a
Resolution
Length = 322
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 67/290 (23%), Positives = 124/290 (42%), Gaps = 53/290 (18%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 33 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R A P + +A + +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPAMANNPVLAPPSLSKMIQMAGEIADGM 151
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------- 482
AYL++ H ++ + N ++++ + +I DFG+ + D YR
Sbjct: 152 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 203
Query: 483 ----APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+PE + +DV+SFGV+L E+ T + P Q L NE+ V++
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFV 253
Query: 538 WTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
+ D + N + + +L+++ C P RPS E+ S I+E
Sbjct: 254 MEGGLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 296
>pdb|3RNY|A Chain A, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
pdb|3RNY|B Chain B, Crystal Structure Of Human Rsk1 C-Terminal Kinase Domain
Length = 346
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 60/212 (28%), Positives = 93/212 (43%), Gaps = 40/212 (18%)
Query: 323 EVLGKGTFG----TAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSM-DHENLVP 376
E +G G++ +KAT +E + V K S+++ E++E++ H N++
Sbjct: 33 ETIGVGSYSECKRCVHKATNMEYAVKVIDK-------SKRDPSEEIEILLRYGQHPNIIT 85
Query: 377 LRAYYYSRDEKLLVHDYMPMGSL-SALLHGNRGAGRTPLNWETRSGLALGA-SRAIAYLH 434
L+ Y LV + M G L +L R E + L + + YLH
Sbjct: 86 LKDVYDDGKHVYLVTELMRGGELLDKIL-------RQKFFSEREASFVLHTIGKTVEYLH 138
Query: 435 SKGPANSHGNIKSSNILL---SKSYEA-RISDFGLAH--------LASPSSTPNRIDGYR 482
S+G H ++K SNIL S + E RI DFG A L +P T N +
Sbjct: 139 SQGVV--HRDLKPSNILYVDESGNPECLRICDFGFAKQLRAENGLLMTPCYTAN----FV 192
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
APEV + + D++S G+LL +L G P
Sbjct: 193 APEVLKRQGYDEGCDIWSLGILLYTMLAGYTP 224
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 50.8 bits (120), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 64/228 (28%), Positives = 98/228 (42%), Gaps = 29/228 (12%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENLVPLRA 379
LG G +G ++ G A+K +K +V+ +++ V+ +DH N++ L
Sbjct: 12 LGSGAYGEVLLCKDKLTGAERAIKIIKKSSVTTTSNSGALLDEVAVLKQLDHPNIMKLYE 71
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
++ + LV + G L + R + + + YLH
Sbjct: 72 FFEDKRNYYLVMEVYRGGELF-----DEIILRQKFSEVDAAVIMKQVLSGTTYLHKHNIV 126
Query: 440 NSHGNIKSSNILL-SKSYEA--RISDFGL-AHLASPSSTPNRIDG--YRAPEVTDARKVS 493
H ++K N+LL SKS +A +I DFGL AH R+ Y APEV +K
Sbjct: 127 --HRDLKPENLLLESKSRDALIKIVDFGLSAHFEVGGKMKERLGTAYYIAPEVL-RKKYD 183
Query: 494 QKADVYSFGVLLLELLTGKAP-----TQALLN--EEG---VDLPRWVQ 531
+K DV+S GV+L LL G P Q +L E+G D P W Q
Sbjct: 184 EKCDVWSCGVILYILLCGYPPFGGQTDQEILKRVEKGKFSFDPPDWTQ 231
>pdb|2YZA|A Chain A, Crystal Structure Of Kinase Domain Of Human
5'-Amp-Activated Protein Kinase Alpha-2 Subunit Mutant
(T172d)
pdb|3AQV|A Chain A, Human Amp-Activated Protein Kinase Alpha 2 Subunit Kinase
Domain (T172d) Complexed With Compound C
Length = 276
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVK-----RLKDVTVSEKEFREKMEVVGSMDHENLV 375
+ LG GTFG ++ G VAVK +++ + V K RE ++ + H +++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE-IQNLKLFRHPHII 74
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + +V +Y+ G L + + GR E R L A+ Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVE-EMEARR-LFQQILSAVDYCHR 129
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS-------PSSTPNRIDGYRAPEVTD 488
H ++K N+LL A+I+DFGL+++ S +PN Y APEV
Sbjct: 130 H--MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRDSCGSPN----YAAPEVIS 183
Query: 489 ARKVS-QKADVYSFGVLLLELLTGKAP 514
R + + D++S GV+L LL G P
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|4FL3|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 635
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 369 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 428
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + + +LV + +G L+ L NR + L S +
Sbjct: 429 NPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 482
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL+ A + + G + A
Sbjct: 483 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 540
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 541 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 580
>pdb|3A60|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A60|B Chain B, Crystal Structure Of Unphosphorylated P70s6k1 (Form I)
pdb|3A61|A Chain A, Crystal Structure Of Unphosphorylated P70s6k1 (Form Ii)
Length = 327
Score = 50.4 bits (119), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 53/213 (24%), Positives = 93/213 (43%), Gaps = 26/213 (12%)
Query: 316 DLLRASAEVLGKGTFGTAYKAT----LEMGIVVAVKRLKDVTV-----SEKEFREKMEVV 366
+LLR VLGKG +G ++ G + A+K LK + + + ++
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 367 GSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
+ H +V L + + + L+ +Y+ G L L R + E + L
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE------REGIFMEDTACFYLAE 129
Query: 427 -SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSSTPNRIDGY 481
S A+ +LH KG + ++K NI+L+ +++DFGL H + + T Y
Sbjct: 130 ISMALGHLHQKGII--YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHTFCGTIEY 187
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
APE+ ++ D +S G L+ ++LTG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|3RFJ|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 279
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 48/100 (48%), Gaps = 2/100 (2%)
Query: 62 LTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKN 121
LT L + L N L+ F KL+NL LYL N G+ L NL RL+L N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLYLYHNQLQSLPKGVFDKLTNLTRLDLDNN 167
Query: 122 NFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLA 161
F+KLT+L L L +NQL S+PD G F L
Sbjct: 168 QLQSLPEGVFDKLTQLKQLSLNDNQL-KSVPD-GVFDRLT 205
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 58/129 (44%), Gaps = 5/129 (3%)
Query: 58 AIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLN 117
A+ LT L + L N L+ F KL+NL+ L L N G+ L NL L
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLY 139
Query: 118 LAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAF---SSLAQFNVSFNKLNGSI 174
L N F+KLT L L L NQL S+P+ G F + L Q +++ N+L
Sbjct: 140 LYHNQLQSLPKGVFDKLTNLTRLDLDNNQLQ-SLPE-GVFDKLTQLKQLSLNDNQLKSVP 197
Query: 175 PKRFARLPS 183
F RL S
Sbjct: 198 DGVFDRLTS 206
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 64/137 (46%), Gaps = 13/137 (9%)
Query: 69 SLRFNALRGTIPSDFA---KLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSG 125
++R+ AL G D + +L+NL L L GN G+ L NL L L +N
Sbjct: 64 NVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS 123
Query: 126 TISADFNKLTRLGTLYLQENQLTGSIPDLGAF---SSLAQFNVSFNKLNGSIPK----RF 178
F+KLT L LYL NQL S+P G F ++L + ++ N+L S+P+ +
Sbjct: 124 LPDGVFDKLTNLTYLYLYHNQLQ-SLPK-GVFDKLTNLTRLDLDNNQLQ-SLPEGVFDKL 180
Query: 179 ARLPSSAFEGNSLCGKP 195
+L + N L P
Sbjct: 181 TQLKQLSLNDNQLKSVP 197
>pdb|4FL2|A Chain A, Structural And Biophysical Characterization Of The Syk
Activation Switch
Length = 636
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/220 (26%), Positives = 95/220 (43%), Gaps = 22/220 (10%)
Query: 317 LLRASAEVLGKGTFGTAYKATLEMGIVVA------VKRLKDVTVSEKEFREKMEVVGSMD 370
LL + LG G FGT K +M VV +K + + E + V+ +D
Sbjct: 370 LLTLEDKELGSGNFGTVKKGYYQMKKVVKTVAVKILKNEANDPALKDELLAEANVMQQLD 429
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
+ +V + + + +LV + +G L+ L NR + L S +
Sbjct: 430 NPYIVRMIGICEA-ESWMLVMEMAELGPLNKYLQQNRHVKDKNI-----IELVHQVSMGM 483
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL--ASPSSTPNRIDG-----YRA 483
YL H ++ + N+LL + A+ISDFGL+ A + + G + A
Sbjct: 484 KYLEESNFV--HRDLAARNVLLVTQHYAKISDFGLSKALRADENYYKAQTHGKWPVKWYA 541
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEE 522
PE + K S K+DV+SFGVL+ E + G+ P + + E
Sbjct: 542 PECINYYKFSSKSDVWSFGVLMWEAFSYGQKPYRGMKGSE 581
>pdb|2H6D|A Chain A, Protein Kinase Domain Of The Human 5'-Amp-Activated
Protein Kinase Catalytic Subunit Alpha-2 (Ampk Alpha-2
Chain)
Length = 276
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 58/207 (28%), Positives = 93/207 (44%), Gaps = 26/207 (12%)
Query: 322 AEVLGKGTFGTAYKATLEM-GIVVAVK-----RLKDVTVSEKEFREKMEVVGSMDHENLV 375
+ LG GTFG ++ G VAVK +++ + V K RE ++ + H +++
Sbjct: 16 GDTLGVGTFGKVKIGEHQLTGHKVAVKILNRQKIRSLDVVGKIKRE-IQNLKLFRHPHII 74
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
L + + +V +Y+ G L + + GR E R L A+ Y H
Sbjct: 75 KLYQVISTPTDFFMVMEYVSGGELFDYICKH---GRVE-EMEARR-LFQQILSAVDYCHR 129
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS-------PSSTPNRIDGYRAPEVTD 488
H ++K N+LL A+I+DFGL+++ S +PN Y APEV
Sbjct: 130 H--MVVHRDLKPENVLLDAHMNAKIADFGLSNMMSDGEFLRTSCGSPN----YAAPEVIS 183
Query: 489 ARKVS-QKADVYSFGVLLLELLTGKAP 514
R + + D++S GV+L LL G P
Sbjct: 184 GRLYAGPEVDIWSCGVILYALLCGTLP 210
>pdb|3FHR|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase-Activated Protein Kinase 3
(Mk3)-Inhibitor Complex
pdb|3FXW|A Chain A, High Resolution Crystal Structure Of Mitogen-Activated
Protein Kinase- Activated Protein Kinase 3INHIBITOR 2
COMPLEX
Length = 336
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 100/231 (43%), Gaps = 32/231 (13%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKEF 359
++F G + + + D + S +VLG G G + G A+K L D + +E
Sbjct: 13 EVLFQGPEPKKYAVTDDYQLSKQVLGLGVNGKVLECFHRRTGQKCALKLLYDSPKARQEV 72
Query: 360 REKME------VVGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRT 412
+ +V +D +EN+ ++ + L++ + M G L + + + G
Sbjct: 73 DHHWQASGGPHIVCILDVYENM------HHGKRCLLIIMECMEGGELFSRI---QERGDQ 123
Query: 413 PLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-- 467
+ + AI +LHS A H ++K N+L SK +A +++DFG A
Sbjct: 124 AFTEREAAEIMRDIGTAIQFLHSHNIA--HRDVKPENLLYTSKEKDAVLKLTDFGFAKET 181
Query: 468 ----LASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
L +P TP Y APEV K + D++S GV++ LL G P
Sbjct: 182 TQNALQTPCYTPY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 228
>pdb|2F9G|A Chain A, Crystal Structure Of Fus3 Phosphorylated On Tyr182
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 324 VLGKGTFGTAYKATLE-MGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVPLRA 379
+LG+G +G AT + G +VA+K+++ + + RE ++++ HEN++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITIFN 76
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ Y+ + LH R L+ + RA+ LH G
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKVLH--GSN 132
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR--------------IDGYRAPE 485
H ++K SN+L++ + + ++ DFGLA + S+ N YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEXVATRWYRAPE 192
Query: 486 VT-DARKVSQKADVYSFGVLLLELL 509
V + K S+ DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9H|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Ste7
pdb|2B9I|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Msg5
pdb|2B9J|A Chain A, Crystal Structure Of Fus3 With A Docking Motif From Far1
pdb|2F49|A Chain A, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2F49|B Chain B, Crystal Structure Of Fus3 In Complex With A Ste5 Peptide
pdb|2FA2|A Chain A, Crystal Structure Of Fus3 Without A Peptide From Ste5
pdb|2FA2|B Chain B, Crystal Structure Of Fus3 Without A Peptide From Ste5
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 324 VLGKGTFGTAYKATLE-MGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVPLRA 379
+LG+G +G AT + G +VA+K+++ + + RE ++++ HEN++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITIFN 76
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ Y+ + LH R L+ + RA+ LH G
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKVLH--GSN 132
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR--------------IDGYRAPE 485
H ++K SN+L++ + + ++ DFGLA + S+ N YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMVEFVATRWYRAPE 192
Query: 486 VT-DARKVSQKADVYSFGVLLLELL 509
V + K S+ DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|2B9F|A Chain A, Crystal Structure Of Non-Phosphorylated Fus3
Length = 353
Score = 50.4 bits (119), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 52/205 (25%), Positives = 91/205 (44%), Gaps = 24/205 (11%)
Query: 324 VLGKGTFGTAYKATLE-MGIVVAVKRLKDVT---VSEKEFREKMEVVGSMDHENLVPLRA 379
+LG+G +G AT + G +VA+K+++ + + RE ++++ HEN++ +
Sbjct: 18 LLGEGAYGVVCSATHKPTGEIVAIKKIEPFDKPLFALRTLRE-IKILKHFKHENIITIFN 76
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ Y+ + LH R L+ + RA+ LH G
Sbjct: 77 IQRPDSFENFNEVYIIQELMQTDLH--RVISTQMLSDDHIQYFIYQTLRAVKVLH--GSN 132
Query: 440 NSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR--------------IDGYRAPE 485
H ++K SN+L++ + + ++ DFGLA + S+ N YRAPE
Sbjct: 133 VIHRDLKPSNLLINSNCDLKVCDFGLARIIDESAADNSEPTGQQSGMTEYVATRWYRAPE 192
Query: 486 VT-DARKVSQKADVYSFGVLLLELL 509
V + K S+ DV+S G +L EL
Sbjct: 193 VMLTSAKYSRAMDVWSCGCILAELF 217
>pdb|3LVP|A Chain A, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|B Chain B, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|C Chain C, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
pdb|3LVP|D Chain D, Crystal Structure Of Bisphosphorylated Igf1-R Kinase
Domain (2p) In Complex With A Bis-Azaindole Inhibitor
Length = 336
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 53/290 (18%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 55 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 113
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 114 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 173
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------- 482
AYL++ H ++ + N ++++ + +I DFG+ + D YR
Sbjct: 174 AYLNANKFV--HRDLAARNCMVAEDFTVKIGDFGMTRDIYET------DYYRKGGKGLLP 225
Query: 483 ----APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+PE + +DV+SFGV+L E+ T + P Q L NE+ V++
Sbjct: 226 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFV 275
Query: 538 WTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
+ D + N + + +L+++ C P RPS E+ S I+E
Sbjct: 276 MEGGLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 318
>pdb|1JQH|A Chain A, Igf-1 Receptor Kinase Domain
pdb|1JQH|B Chain B, Igf-1 Receptor Kinase Domain
pdb|1JQH|C Chain C, Igf-1 Receptor Kinase Domain
Length = 308
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 27 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 85
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 86 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 145
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N ++++ + +I DFG+ + P R +
Sbjct: 146 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 200
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 201 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 246
Query: 541 EVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + N + + +L+++ C P RPS E+ S I+E
Sbjct: 247 -VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 290
>pdb|3CJG|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 70/288 (24%), Positives = 121/288 (42%), Gaps = 48/288 (16%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-------GRTPLNWETRSGLALGA 426
V L L+V ++ G+LS L R + L E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLICYSFQV 153
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------ 480
++ + +L S+ H ++ + NILLS+ +I DFGLA P+ +
Sbjct: 154 AKGMEFLASR--KXIHRDLAARNILLSEKNVVKICDFGLAR--DIYKDPDYVRKGDARLP 209
Query: 481 --YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+ APE R + ++DV+SFGVLL E+ + G +P + + EE
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYPGV--------------KIDEE 255
Query: 538 WTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 585
+ + E R + + ++ Q ++C P RP+ +E+ +
Sbjct: 256 FCRRL--KEGTRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|3QQU|A Chain A, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|B Chain B, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|C Chain C, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
pdb|3QQU|D Chain D, Cocrystal Structure Of Unphosphorylated Igf With
Pyrimidine 8
Length = 301
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 20 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N ++++ + +I DFG+ + P R +
Sbjct: 139 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 193
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 239
Query: 541 EVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + N + + +L+++ C P RPS E+ S I+E
Sbjct: 240 -VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 283
>pdb|3O23|A Chain A, Human Unphosphorylated Igf1-R Kinase Domain In Complex
With An Hydantoin Inhibitor
Length = 305
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 24 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 82
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 83 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 142
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N ++++ + +I DFG+ + P R +
Sbjct: 143 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 197
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 198 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 243
Query: 541 EVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + N + + +L+++ C P RPS E+ S I+E
Sbjct: 244 -VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 287
>pdb|2OJ9|A Chain A, Structure Of Igf-1r Kinase Domain Complexed With A
Benzimidazole Inhibitor
pdb|3NW5|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11b)
pdb|3NW6|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (11a)
pdb|3NW7|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With A Carbon-Linked Proline
Isostere Inhibitor (34)
Length = 307
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 66/288 (22%), Positives = 123/288 (42%), Gaps = 49/288 (17%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 26 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N ++++ + +I DFG+ + P R +
Sbjct: 145 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 199
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 200 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 245
Query: 541 EVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + N + + +L+++ C P RPS E+ S I+E
Sbjct: 246 -VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 289
>pdb|3I81|A Chain A, Crystal Structure Of Insulin-Like Growth Factor 1 Receptor
(Igf-1r-Wt) Complex With Bms-754807
[1-(4-((5-Cyclopropyl-
1h-Pyrazol-3-Yl)amino)pyrrolo[2,1-F][1,2,
4]triazin-2-Yl)-N-
(6-Fluoro-3-Pyridinyl)-2-Methyl-L-Prolinamide]
Length = 315
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 66/290 (22%), Positives = 123/290 (42%), Gaps = 53/290 (18%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 26 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 84
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 85 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 144
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------- 482
AYL++ H ++ + N ++++ + +I DFG+ + D YR
Sbjct: 145 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 196
Query: 483 ----APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+PE + +DV+SFGV+L E+ T + P Q L NE+ V++
Sbjct: 197 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQ----------VLRFV 246
Query: 538 WTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
+ D + N + + +L+++ C P RPS E+ S I+E
Sbjct: 247 MEGGLLD----KPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 289
>pdb|3G0F|A Chain A, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
pdb|3G0F|B Chain B, Kit Kinase Domain Mutant D816h In Complex With Sunitinib
Length = 336
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 70/294 (23%), Positives = 128/294 (43%), Gaps = 47/294 (15%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLK-DVTVSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK ++E+E +++V+ + +H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA----GRTP---------LNWETRS 420
+V L L++ +Y G L L R + +P L+ E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA-HLASPSSTPNRID 479
+ ++ +A+L SK H ++ + NILL+ +I DFGLA H+ + S+ + +
Sbjct: 172 SFSYQVAKGMAFLASKNCI--HRDLAARNILLTHGRITKICDFGLARHIKNDSNYVVKGN 229
Query: 480 G-----YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSV 533
+ APE + ++DV+S+G+ L EL + G +P G+ + +
Sbjct: 230 ARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PGMPVDSKFYKM 283
Query: 534 VKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
+KE +L ++ EM +++ C P RP+ ++ IE+
Sbjct: 284 IKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 327
>pdb|3BEA|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With A
Pyrimidinopyridone Inhibitor
Length = 333
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 53/295 (17%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVT-VSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK EKE +++++ + HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSL-------SALLHGNRGAGRTPLNWETRSGLALGA 426
+V L L++ +Y G L S +L + TR L +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTLSTRDLLHFSS 171
Query: 427 --SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH---------LASPSSTP 475
++ +A+L SK H ++ + N+LL+ + A+I DFGLA + + P
Sbjct: 172 QVAQGMAFLASKNCI--HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 476 NRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVV 534
+ + APE + ++DV+S+G+LL E+ + G P +L
Sbjct: 230 VK---WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-------------- 272
Query: 535 KEEWTAEVFDLELLRYQNVEEEMV--QLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++ + L YQ + + + C A P +RP+ ++ S ++E
Sbjct: 273 ----NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|2QR7|A Chain A, 2.0a X-Ray Structure Of C-Terminal Kinase Domain Of P90
Ribosomal S6 Kinase 2: Se-Met Derivative
Length = 342
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 53/107 (49%), Gaps = 18/107 (16%)
Query: 420 SGLALGASRAIAYLHSKGPANSHGNIKSSNILL---SKSYEA-RISDFGLAH-------- 467
S + ++ + YLH++G H ++K SNIL S + E+ RI DFG A
Sbjct: 119 SAVLFTITKTVEYLHAQGVV--HRDLKPSNILYVDESGNPESIRICDFGFAKQLRAENGL 176
Query: 468 LASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
L +P T N + APEV + + D++S GVLL LTG P
Sbjct: 177 LXTPCYTAN----FVAPEVLERQGYDAACDIWSLGVLLYTXLTGYTP 219
>pdb|3CJF|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
3,4,5-Trimethoxy Aniline Containing Pyrimidine
Length = 309
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 71/288 (24%), Positives = 120/288 (41%), Gaps = 48/288 (16%)
Query: 325 LGKGTFGTAYKATLEMGI-------VVAVKRLKD-VTVSE-KEFREKMEVVGSMDHE-NL 374
LG+G FG +A GI VAVK LK+ T SE + +++++ + H N+
Sbjct: 35 LGRGAFGQVIEAD-AFGIDKTATXRTVAVKMLKEGATHSEHRALMSELKILIHIGHHLNV 93
Query: 375 VPLRAYYYSRDEKLLV-HDYMPMGSLSALLHGNRGA-------GRTPLNWETRSGLALGA 426
V L L+V ++ G+LS L R + L E +
Sbjct: 94 VNLLGACTKPGGPLMVIVEFCKFGNLSTYLRSKRNEFVPYKDLYKDFLTLEHLIXYSFQV 153
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------ 480
++ + +L S+ H ++ + NILLS+ +I DFGLA P+ +
Sbjct: 154 AKGMEFLASR--KXIHRDLAARNILLSEKNVVKIXDFGLAR--DIYKDPDYVRKGDARLP 209
Query: 481 --YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+ APE R + ++DV+SFGVLL E+ + G +P GV + +KE
Sbjct: 210 LKWMAPETIFDRVYTIQSDVWSFGVLLWEIFSLGASPYP------GVKIDEEFXRRLKEG 263
Query: 538 WTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 585
R + + ++ Q ++C P RP+ +E+ +
Sbjct: 264 ----------TRMRAPDYTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 301
>pdb|1M7N|A Chain A, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
pdb|1M7N|B Chain B, Crystal Structure Of Unactivated Apo Insulin-Like Growth
Factor-1 Receptor Kinase Domain
Length = 322
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 67/291 (23%), Positives = 123/291 (42%), Gaps = 55/291 (18%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 33 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 91
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 92 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 151
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR-------- 482
AYL++ H ++ + N ++++ + +I DFG+ + D YR
Sbjct: 152 AYLNAN--KFVHRDLAARNCMVAEDFTVKIGDFGM------TRDIYETDYYRKGGKGLLP 203
Query: 483 ----APEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEE 537
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 204 VRWMSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF----------- 252
Query: 538 WTAEVFDLELL-RYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + N + + +L+++ C P RPS E+ S I+E
Sbjct: 253 ----VMEGGLLDKPDNCPDMLFELMRM---CWQYNPKMRPSFLEIISSIKE 296
>pdb|2Y7J|A Chain A, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|B Chain B, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|C Chain C, Structure Of Human Phosphorylase Kinase, Gamma 2
pdb|2Y7J|D Chain D, Structure Of Human Phosphorylase Kinase, Gamma 2
Length = 365
Score = 49.3 bits (116), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/153 (28%), Positives = 65/153 (42%), Gaps = 16/153 (10%)
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
H +++ L Y S LV D M G L L ETRS + A+
Sbjct: 159 HPHIITLIDSYESSSFMFLVFDLMRKGELFDYLTEKVALSEK----ETRS-IMRSLLEAV 213
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI---DGYRAPEVT 487
++LH+ H ++K NILL + + R+SDFG + P + GY APE+
Sbjct: 214 SFLHANNIV--HRDLKPENILLDDNMQIRLSDFGFSCHLEPGEKLRELCGTPGYLAPEIL 271
Query: 488 DARK------VSQKADVYSFGVLLLELLTGKAP 514
++ D+++ GV+L LL G P
Sbjct: 272 KCSMDETHPGYGKEVDLWACGVILFTLLAGSPP 304
>pdb|2PZY|A Chain A, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|B Chain B, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|C Chain C, Structure Of Mk2 Complexed With Compound 76
pdb|2PZY|D Chain D, Structure Of Mk2 Complexed With Compound 76
pdb|3KC3|A Chain A, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|B Chain B, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|C Chain C, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|D Chain D, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|E Chain E, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|F Chain F, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|G Chain G, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|H Chain H, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|I Chain I, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|J Chain J, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|K Chain K, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3KC3|L Chain L, Mk2 Complexed To Inhibitor
N4-(7-(Benzofuran-2-Yl)-1h-Indazol-5-Yl)
Pyrimidine-2,4-Diamine
pdb|3A2C|A Chain A, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|B Chain B, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|C Chain C, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|D Chain D, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|E Chain E, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|F Chain F, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|G Chain G, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|H Chain H, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|I Chain I, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|J Chain J, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|K Chain K, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
pdb|3A2C|L Chain L, Crystal Structure Of A Pyrazolopyrimidine Inhibitor
Complex Mapkap Kinase-2 (Mk2)
Length = 324
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 21 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 77
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 78 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 128
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 129 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 186
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 187 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 222
>pdb|3FPM|A Chain A, Crystal Structure Of A Squarate Inhibitor Bound To Mapkap
Kinase-2
Length = 325
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 22 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 78
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 79 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 129
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 130 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 187
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 188 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 223
>pdb|3D94|A Chain A, Crystal Structure Of The Insulin-Like Growth Factor-1
Receptor Kinase In Complex With Pqip
Length = 301
Score = 49.3 bits (116), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 68/287 (23%), Positives = 120/287 (41%), Gaps = 47/287 (16%)
Query: 325 LGKGTFGTAYKATLEMGIV-------VAVKRLKDV-TVSEK-EFREKMEVVGSMDHENLV 375
LG+G+FG Y+ + G+V VA+K + + ++ E+ EF + V+ + ++V
Sbjct: 20 LGQGSFGMVYEGVAK-GVVKDEPETRVAIKTVNEAASMRERIEFLNEASVMKEFNCHHVV 78
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGR-----TPLNWETRSGLALGASRAI 430
L L++ + M G L + L R P + +A + +
Sbjct: 79 RLLGVVSQGQPTLVIMELMTRGDLKSYLRSLRPEMENNPVLAPPSLSKMIQMAGEIADGM 138
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST---------PNRIDGY 481
AYL++ H ++ + N +++ + +I DFG+ + P R +
Sbjct: 139 AYLNAN--KFVHRDLAARNCXVAEDFTVKIGDFGMTRDIYETDYYRKGGKGLLPVR---W 193
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTA 540
+PE + +DV+SFGV+L E+ T + P Q L NE+ +
Sbjct: 194 MSPESLKDGVFTTYSDVWSFGVVLWEIATLAEQPYQGLSNEQVLRF-------------- 239
Query: 541 EVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
V + LL + +M LL+L C P RPS E+ S I+E
Sbjct: 240 -VMEGGLLDKPDNCPDM--LLELMRMCWQYNPKMRPSFLEIISSIKE 283
>pdb|3R1N|A Chain A, Mk3 Kinase Bound To Compound 5b
pdb|3SHE|A Chain A, Novel Atp-Competitive Mk2 Inhibitors With Potent
Biochemical And Cell- Based Activity Throughout The
Series
Length = 317
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 15/95 (15%)
Query: 429 AIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH------LASPSSTPNRID 479
AI +LHS A H ++K N+L SK +A +++DFG A L +P TP
Sbjct: 121 AIQFLHSHNIA--HRDVKPENLLYTSKEKDAVLKLTDFGFAKETTQNALQTPCYTPY--- 175
Query: 480 GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y APEV K + D++S GV++ LL G P
Sbjct: 176 -YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGFPP 209
>pdb|2JBO|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (Crystal
Form-1, Soaking)
pdb|2JBP|A Chain A, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|B Chain B, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|C Chain C, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|D Chain D, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|E Chain E, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|F Chain F, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|G Chain G, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|H Chain H, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|I Chain I, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|J Chain J, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|K Chain K, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
pdb|2JBP|L Chain L, Protein Kinase Mk2 In Complex With An Inhibitor (crystal
Form-2, Co-crystallization)
Length = 326
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 23 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 79
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 80 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 130
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 131 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 188
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 189 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 224
>pdb|2I1M|A Chain A, Cfms Tyrosine Kinase (Tie2 Kid) In Complex With An
Arylamide Inhibitor
Length = 333
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 69/295 (23%), Positives = 122/295 (41%), Gaps = 53/295 (17%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVT-VSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK EKE +++++ + HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSL-------SALLHGNRGAGRTPLNWETRSGLALGA 426
+V L L++ +Y G L S +L + TR L +
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKSRVLETDPAFAIANSTASTRDLLHFSS 171
Query: 427 --SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH---------LASPSSTP 475
++ +A+L SK H ++ + N+LL+ + A+I DFGLA + + P
Sbjct: 172 QVAQGMAFLASKNCI--HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNARLP 229
Query: 476 NRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVV 534
+ + APE + ++DV+S+G+LL E+ + G P +L
Sbjct: 230 VK---WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV-------------- 272
Query: 535 KEEWTAEVFDLELLRYQNVEEEMV--QLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++ + L YQ + + + C A P +RP+ ++ S ++E
Sbjct: 273 ----NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 323
>pdb|3VHK|A Chain A, Crystal Structure Of The Vegfr2 Kinase Domain In Complex
With A Back Pocket Binder
Length = 368
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR------APEVTDARKVSQK 495
H ++ + NILLS+ +I DFGLA R R APE R + +
Sbjct: 223 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 282
Query: 496 ADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
+DV+SFGVLL E+ + G +P + + EE+ + E R + +
Sbjct: 283 SDVWSFGVLLWEIFSLGASPYPGV--------------KIDEEFCRRL--KEGTRMRAPD 326
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 327 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 367
>pdb|3GOK|A Chain A, Binding Site Mapping Of Protein Ligands
pdb|3GOK|B Chain B, Binding Site Mapping Of Protein Ligands
pdb|3GOK|C Chain C, Binding Site Mapping Of Protein Ligands
pdb|3GOK|D Chain D, Binding Site Mapping Of Protein Ligands
pdb|3GOK|E Chain E, Binding Site Mapping Of Protein Ligands
pdb|3GOK|F Chain F, Binding Site Mapping Of Protein Ligands
pdb|3GOK|G Chain G, Binding Site Mapping Of Protein Ligands
pdb|3GOK|H Chain H, Binding Site Mapping Of Protein Ligands
pdb|3GOK|I Chain I, Binding Site Mapping Of Protein Ligands
pdb|3GOK|J Chain J, Binding Site Mapping Of Protein Ligands
pdb|3GOK|K Chain K, Binding Site Mapping Of Protein Ligands
pdb|3GOK|L Chain L, Binding Site Mapping Of Protein Ligands
Length = 334
Score = 48.9 bits (115), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 31 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 87
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 88 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 138
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 139 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 196
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 197 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 232
>pdb|3R2Y|A Chain A, Mk2 Kinase Bound To Compound 1
pdb|3R30|A Chain A, Mk2 Kinase Bound To Compound 2
Length = 319
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 16 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 72
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 73 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 123
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 124 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 181
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 182 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 217
>pdb|2P3G|X Chain X, Crystal Structure Of A Pyrrolopyridine Inhibitor Bound To
Mapkap Kinase-2
pdb|3FYJ|X Chain X, Crystal Structure Of An Optimzied Benzothiophene Inhibitor
Bound To Mapkap Kinase-2 (Mk-2)
pdb|3FYK|X Chain X, Crystal Structure Of A Benzthiophene Lead Bound To Mapkap
Kinase-2 (Mk-2)
Length = 327
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 73
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 74 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 124
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 125 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 183 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3R2B|A Chain A, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|B Chain B, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|C Chain C, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|D Chain D, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|E Chain E, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|F Chain F, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|G Chain G, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|H Chain H, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|I Chain I, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|J Chain J, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|K Chain K, Mk2 Kinase Bound To Compound 5b
pdb|3R2B|L Chain L, Mk2 Kinase Bound To Compound 5b
Length = 318
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 71
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 72 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 122
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 123 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 180
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 181 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|3ORM|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain D76a Mutant
Length = 311
Score = 48.9 bits (115), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 94/208 (45%), Gaps = 23/208 (11%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEK----EFREKMEVVGSMDHENLVPL 377
E+LG G + A L + VAVK L+ + FR + + +++H +V +
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIVAV 77
Query: 378 RAYYYSRDE----KLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
A + +V +Y+ +L ++H P+ + + A +A+ +
Sbjct: 78 YATGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQALNFS 132
Query: 434 HSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPS----STPNRIDG---YRAPEV 486
H G H ++K +NI++S + ++ DFG+A + S + + G Y +PE
Sbjct: 133 HQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLSPEQ 190
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAP 514
V ++DVYS G +L E+LTG+ P
Sbjct: 191 ARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1ZXE|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|E Chain E, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
pdb|1ZXE|F Chain F, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: D835n
Inactivating Mutant In Apo Form
Length = 303
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 87/219 (39%), Gaps = 39/219 (17%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
VLG+G FG KA + A+K+++ ++ ++ S++H+ +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVXLLASLNHQYVVRYYAAWL 72
Query: 383 SR------------DEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
R L + +Y +L L+H + W L A
Sbjct: 73 ERRNFVKPXTAVKKKSTLFIQXEYCENRTLYDLIHSENLNQQRDEYWR----LFRQILEA 128
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS-------------PSSTPN 476
++Y+HS+G H N+K NI + +S +I DFGLA P S+ N
Sbjct: 129 LSYIHSQGII--HRNLKPXNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 477 RIDG-----YRAPEVTDAR-KVSQKADVYSFGVLLLELL 509
Y A EV D ++K D YS G++ E +
Sbjct: 187 LTSAIGTAXYVATEVLDGTGHYNEKIDXYSLGIIFFEXI 225
>pdb|1Y6A|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
pdb|1Y6B|A Chain A, Crystal Structure Of Vegfr2 In Complex With A
2-Anilino-5-Aryl-Oxazole Inhibitor
Length = 366
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 41/161 (25%), Positives = 71/161 (44%), Gaps = 23/161 (14%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR------APEVTDARKVSQK 495
H ++ + NILLS+ +I DFGLA R R APE R + +
Sbjct: 221 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 280
Query: 496 ADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
+DV+SFGVLL E+ + G +P + + EE+ + E R + +
Sbjct: 281 SDVWSFGVLLWEIFSLGASPYPGV--------------KIDEEFCRRL--KEGTRMRAPD 324
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQQ 595
++ Q ++C P RP+ +E+ + + +++ QQ
Sbjct: 325 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQQ 365
>pdb|1KWP|A Chain A, Crystal Structure Of Mapkap2
pdb|1KWP|B Chain B, Crystal Structure Of Mapkap2
pdb|1NY3|A Chain A, Crystal Structure Of Adp Bound To Map Kap Kinase 2
Length = 400
Score = 48.9 bits (115), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 117
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 118 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 168
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 169 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 227 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 262
>pdb|3A62|A Chain A, Crystal Structure Of Phosphorylated P70s6k1
Length = 327
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/213 (24%), Positives = 92/213 (43%), Gaps = 26/213 (12%)
Query: 316 DLLRASAEVLGKGTFGTAYKAT----LEMGIVVAVKRLKDVTV-----SEKEFREKMEVV 366
+LLR VLGKG +G ++ G + A+K LK + + + ++
Sbjct: 20 ELLR----VLGKGGYGKVFQVRKVTGANTGKIFAMKVLKKAMIVRNAKDTAHTKAERNIL 75
Query: 367 GSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
+ H +V L + + + L+ +Y+ G L L R + E + L
Sbjct: 76 EEVKHPFIVDLIYAFQTGGKLYLILEYLSGGELFMQLE------REGIFMEDTACFYLAE 129
Query: 427 -SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLA----HLASPSSTPNRIDGY 481
S A+ +LH KG + ++K NI+L+ +++DFGL H + + Y
Sbjct: 130 ISMALGHLHQKGII--YRDLKPENIMLNHQGHVKLTDFGLCKESIHDGTVTHXFCGTIEY 187
Query: 482 RAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
APE+ ++ D +S G L+ ++LTG P
Sbjct: 188 MAPEILMRSGHNRAVDWWSLGALMYDMLTGAPP 220
>pdb|2I0V|A Chain A, C-Fms Tyrosine Kinase In Complex With A Quinolone
Inhibitor
pdb|2I0Y|A Chain A, Cfms Tyrosine Kinase (Fgf Kid) In Complex With An
Arylamide Inhibitor
pdb|3DPK|A Chain A, Cfms Tyrosine Kinase In Complex With A Pyridopyrimidinone
Inhibitor
pdb|3KRJ|A Chain A, Cfms Tyrosine Kinase In Complex With
4-Cyano-1h-Imidazole-2-Carboxylic Acid
(2-Cyclohex-1-Enyl-4-Piperidin-4-Yl-Phenyl)-Amide
pdb|3KRL|A Chain A, Cfms Tyrosine Kinase In Complex With
5-Cyano-Furan-2-Carboxylic Acid
[4-(4-Methyl-Piperazin-1-Yl)-2-Piperidin-1-Yl-Phenyl]-
Amide
Length = 335
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 68/297 (22%), Positives = 120/297 (40%), Gaps = 55/297 (18%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLKDVT-VSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK EKE +++++ + HEN
Sbjct: 52 KTLGAGAFGKVVEATAFGLGKEDAVLKVAVKMLKSTAHADEKEALMSELKIMSHLGQHEN 111
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAG-----------RTPLNWETRSGL 422
+V L L++ +Y G L L R G L+
Sbjct: 112 IVNLLGACTHGGPVLVITEYCCYGDLLNFLRRKRPPGLEYSYNPSHNPEEQLSSRDLLHF 171
Query: 423 ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH---------LASPSS 473
+ ++ +A+L SK H ++ + N+LL+ + A+I DFGLA + +
Sbjct: 172 SSQVAQGMAFLASKNCI--HRDVAARNVLLTNGHVAKIGDFGLARDIMNDSNYIVKGNAR 229
Query: 474 TPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
P + + APE + ++DV+S+G+LL E+ + G P +L
Sbjct: 230 LPVK---WMAPESIFDCVYTVQSDVWSYGILLWEIFSLGLNPYPGILV------------ 274
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMV--QLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++ + L YQ + + + C A P +RP+ ++ S ++E
Sbjct: 275 ------NSKFYKLVKDGYQMAQPAFAPKNIYSIMQACWALEPTHRPTFQQICSFLQE 325
>pdb|2O6S|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
pdb|2O6S|B Chain B, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B59
Length = 208
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 53/111 (47%), Gaps = 2/111 (1%)
Query: 53 GQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGN 112
G+ + G + + L N+L+ F +L++L LYL GN G+ L +
Sbjct: 18 GRTSVPTGIPAQTTYLDLETNSLKSLPNGVFDELTSLTQLYLGGNKLQSLPNGVFNKLTS 77
Query: 113 LIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQF 163
L LNL+ N + F+KLT+L L L NQL S+PD G F L Q
Sbjct: 78 LTYLNLSTNQLQSLPNGVFDKLTQLKELALNTNQLQ-SLPD-GVFDKLTQL 126
Score = 37.0 bits (84), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 35/102 (34%), Positives = 44/102 (43%), Gaps = 2/102 (1%)
Query: 62 LTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKN 121
LT L + L N L+ F KL++L L L N G+ L L L L N
Sbjct: 51 LTSLTQLYLGGNKLQSLPNGVFNKLTSLTYLNLSTNQLQSLPNGVFDKLTQLKELALNTN 110
Query: 122 NFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQF 163
F+KLT+L L L +NQL S+PD G F L
Sbjct: 111 QLQSLPDGVFDKLTQLKDLRLYQNQLK-SVPD-GVFDRLTSL 150
>pdb|2ONL|C Chain C, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
pdb|2ONL|D Chain D, Crystal Structure Of The P38a-Mapkap Kinase 2 Heterodimer
Length = 406
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 67 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 123
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 124 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 174
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 175 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 232
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 233 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 268
>pdb|3RFS|A Chain A, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
pdb|3RFS|B Chain B, Design Of A Binding Scaffold Based On Variable Lymphocyte
Receptors Of Jawless Vertebrates By Module Engineering
Length = 272
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 49/106 (46%), Gaps = 2/106 (1%)
Query: 58 AIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLN 117
A+ LT L + L N L+ F KL+NL+ L L N G+ L NL LN
Sbjct: 80 ALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQSLPDGVFDKLTNLTYLN 139
Query: 118 LAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQF 163
LA N F+KLT L L L NQL S+P+ G F L Q
Sbjct: 140 LAHNQLQSLPKGVFDKLTNLTELDLSYNQLQ-SLPE-GVFDKLTQL 183
Score = 45.1 bits (105), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 47/100 (47%), Gaps = 2/100 (2%)
Query: 62 LTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKN 121
LT L + L N L+ F KL+NL L L N G+ L NL L+L+ N
Sbjct: 108 LTNLKELVLVENQLQSLPDGVFDKLTNLTYLNLAHNQLQSLPKGVFDKLTNLTELDLSYN 167
Query: 122 NFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLA 161
F+KLT+L L L +NQL S+PD G F L
Sbjct: 168 QLQSLPEGVFDKLTQLKDLRLYQNQLK-SVPD-GVFDRLT 205
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 58/114 (50%), Gaps = 9/114 (7%)
Query: 69 SLRFNALRGTIPSDFA---KLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSG 125
++R+ AL G D + +L+NL L L GN G+ L NL L L +N
Sbjct: 64 NVRYLALGGNKLHDISALKELTNLTYLILTGNQLQSLPNGVFDKLTNLKELVLVENQLQS 123
Query: 126 TISADFNKLTRLGTLYLQENQLTGSIPDLGAF---SSLAQFNVSFNKLNGSIPK 176
F+KLT L L L NQL S+P G F ++L + ++S+N+L S+P+
Sbjct: 124 LPDGVFDKLTNLTYLNLAHNQLQ-SLPK-GVFDKLTNLTELDLSYNQLQ-SLPE 174
>pdb|2OZA|A Chain A, Structure Of P38alpha Complex
Length = 356
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 93/220 (42%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 17 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 73
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 74 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 124
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 125 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 182
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 183 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 218
>pdb|3KA0|A Chain A, Mk2 Complex With Inhibitor
6-(5-(2-Aminopyrimidin-4-Ylamino)-2-
Hydroxyphenyl)-N-Methylbenzo[b]thiophene-2-Carboxamide
Length = 320
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 15 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKMLQDCPKARREVELHWRASQCPHI 71
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 72 VRIVDVYENL------YAGRKCLLIVMECLDGGELFSRIQDR---GDQAFTEREASEIMK 122
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L P T
Sbjct: 123 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTEPCYT 180
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D++S GV++ LL G P
Sbjct: 181 PY----YVAPEVLGPEKYDKSCDMWSLGVIMYILLCGYPP 216
>pdb|1ZYC|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|C Chain C, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYC|D Chain D, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type In Apo Form.
pdb|1ZYD|A Chain A, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp.
pdb|1ZYD|B Chain B, Crystal Structure Of Eif2alpha Protein Kinase Gcn2: Wild-
Type Complexed With Atp
Length = 303
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 51/219 (23%), Positives = 89/219 (40%), Gaps = 39/219 (17%)
Query: 324 VLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYY 382
VLG+G FG KA + A+K+++ ++ ++ S++H+ +V A +
Sbjct: 13 VLGQGAFGQVVKARNALDSRYYAIKKIRHTEEKLSTILSEVMLLASLNHQYVVRYYAAWL 72
Query: 383 SR------------DEKLLVH-DYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
R L + +Y +L L+H + W L A
Sbjct: 73 ERRNFVKPMTAVKKKSTLFIQMEYCENRTLYDLIHSENLNQQRDEYWR----LFRQILEA 128
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG--------- 480
++Y+HS+G H ++K NI + +S +I DFGLA S ++D
Sbjct: 129 LSYIHSQGII--HRDLKPMNIFIDESRNVKIGDFGLAKNVHRSLDILKLDSQNLPGSSDN 186
Query: 481 ---------YRAPEVTDAR-KVSQKADVYSFGVLLLELL 509
Y A EV D ++K D+YS G++ E++
Sbjct: 187 LTSAIGTAMYVATEVLDGTGHYNEKIDMYSLGIIFFEMI 225
>pdb|1O6Y|A Chain A, Catalytic Domain Of Pknb Kinase From Mycobacterium
Tuberculosis
pdb|2FUM|A Chain A, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|B Chain B, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|C Chain C, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
pdb|2FUM|D Chain D, Catalytic Domain Of Protein Kinase Pknb From Mycobacterium
Tuberculosis In Complex With Mitoxantrone
Length = 299
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEK----EFREKMEVVGSMDHENLVPL 377
E+LG G + A L + VAVK L+ + FR + + +++H +V
Sbjct: 35 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV-- 92
Query: 378 RAYYYSRDEK-------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
A Y + + + +V +Y+ +L ++H P+ + + A +A+
Sbjct: 93 -AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQAL 146
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPS----STPNRIDG---YRA 483
+ H G H ++K +NI++S + ++ DFG+A + S + + G Y +
Sbjct: 147 NFSHQNGII--HRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 204
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
PE V ++DVYS G +L E+LTG+ P
Sbjct: 205 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 235
>pdb|1MRU|A Chain A, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb.
pdb|1MRU|B Chain B, Intracellular SerTHR PROTEIN KINASE DOMAIN OF
Mycobacterium Tuberculosis Pknb
Length = 311
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 96/211 (45%), Gaps = 29/211 (13%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEK----EFREKMEVVGSMDHENLVPL 377
E+LG G + A L + VAVK L+ + FR + + +++H +V
Sbjct: 18 EILGFGGMSEVHLARDLRLHRDVAVKVLRADLARDPSFYLRFRREAQNAAALNHPAIV-- 75
Query: 378 RAYYYSRDEK-------LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
A Y + + + +V +Y+ +L ++H P+ + + A +A+
Sbjct: 76 -AVYDTGEAETPAGPLPYIVMEYVDGVTLRDIVHTE-----GPMTPKRAIEVIADACQAL 129
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPS----STPNRIDG---YRA 483
+ H G H ++K +NI++S + ++ DFG+A + S + + G Y +
Sbjct: 130 NFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGTAQYLS 187
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
PE V ++DVYS G +L E+LTG+ P
Sbjct: 188 PEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 324 VLGKGTFGTAYKATLEMGIV-VAVKRLKDVTVSEKE----FREKMEVVGSMDHENLVPLR 378
+LGKG+FG K + AVK + + K+ RE +E++ +DH N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-VELLKKLDHPNIMKLF 87
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+V + G L + R + + + I Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGEL-----FDEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 439 ANSHGNIKSSNILLS---KSYEARISDFGLAH-LASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K NILL K + +I DFGL+ + +RI Y APEV
Sbjct: 143 V--HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TY 199
Query: 493 SQKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
+K DV+S GV+L LL+G P + + DLP+W
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|2W4O|A Chain A, Crystal Structure Of Human Camk4 In Complex With 4-Amino(
Sulfamoyl-Phenylamino)-Triazole-Carbothioic Acid (2,6-
Difluoro-Phenyl)-Amide)
Length = 349
Score = 48.1 bits (113), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 53/208 (25%), Positives = 89/208 (42%), Gaps = 16/208 (7%)
Query: 314 LEDLLRASAEVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHE 372
L D +E LG+G Y+ + A+K LK TV +K R ++ V+ + H
Sbjct: 51 LSDFFEVESE-LGRGATSIVYRCKQKGTQKPYALKVLKK-TVDKKIVRTEIGVLLRLSHP 108
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N++ L+ + + E LV + + G L +R + + + A+AY
Sbjct: 109 NIIKLKEIFETPTEISLVLELVTGGELF-----DRIVEKGYYSERDAADAVKQILEAVAY 163
Query: 433 LHSKGPANSHGNIKSSNILLSK---SYEARISDFGLAHLASPS---STPNRIDGYRAPEV 486
LH G H ++K N+L + +I+DFGL+ + T GY APE+
Sbjct: 164 LHENGIV--HRDLKPENLLYATPAPDAPLKIADFGLSKIVEHQVLMKTVCGTPGYCAPEI 221
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAP 514
+ D++S G++ LL G P
Sbjct: 222 LRGCAYGPEVDMWSVGIITYILLCGFEP 249
>pdb|2PHK|A Chain A, The Crystal Structure Of A Phosphorylase Kinase Peptide
Substrate Complex: Kinase Substrate Recognition
Length = 277
Score = 48.1 bits (113), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 346 VKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHG 405
V+ L++ T+ E + K+ H N++ L+ Y + LV D M G L L
Sbjct: 50 VQELREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 102
Query: 406 NRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL 465
+ L+ + + I LH H ++K NILL +++DFG
Sbjct: 103 ---TEKVTLSEKETRKIMRALLEVICALHKLNIV--HRDLKPENILLDDDMNIKLTDFGF 157
Query: 466 AHLASPSSTPNRIDG---YRAPEVTDARK------VSQKADVYSFGVLLLELLTGKAP 514
+ P + G Y APE+ + ++ D++S GV++ LL G P
Sbjct: 158 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 215
>pdb|4AW2|A Chain A, Crystal Structure Of Cdc42 Binding Protein Kinase Alpha
(Mrck Alpha)
Length = 437
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/210 (26%), Positives = 89/210 (42%), Gaps = 21/210 (10%)
Query: 323 EVLGKGTFGTAYKATLE-MGIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENLVPL 377
+V+G+G FG L+ V A+K L + ++ FRE+ +V+ + D + + L
Sbjct: 80 KVIGRGAFGEVAVVKLKNADKVFAMKILNKWEMLKRAETACFREERDVLVNGDSKWITTL 139
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ + LV DY G L LL ++ R P E + L A IA
Sbjct: 140 HYAFQDDNNLYLVMDYYVGGDLLTLL--SKFEDRLP---EEMARFYL-AEMVIAIDSVHQ 193
Query: 438 PANSHGNIKSSNILLSKSYEARISDFG-----LAHLASPSSTPNRIDGYRAPEVTDAR-- 490
H +IK NIL+ + R++DFG + SS Y +PE+ A
Sbjct: 194 LHYVHRDIKPDNILMDMNGHIRLADFGSCLKLMEDGTVQSSVAVGTPDYISPEILQAMEG 253
Query: 491 ---KVSQKADVYSFGVLLLELLTGKAPTQA 517
+ + D +S GV + E+L G+ P A
Sbjct: 254 GKGRYGPECDWWSLGVCMYEMLYGETPFYA 283
>pdb|1T46|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C-kit Tyrosine Kinase
Length = 313
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLK-DVTVSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK ++E+E +++V+ + +H N
Sbjct: 29 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 88
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA----GRTP---------LNWETRS 420
+V L L++ +Y G L L R + +P L+ E
Sbjct: 89 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 148
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG 480
+ ++ +A+L SK H ++ + NILL+ +I DFGLA S + G
Sbjct: 149 SFSYQVAKGMAFLASKNCI--HRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKG 205
Query: 481 -------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
+ APE + ++DV+S+G+ L EL + G +P G+ +
Sbjct: 206 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PGMPVDSKFYK 259
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++KE +L ++ EM +++ C P RP+ ++ IE+
Sbjct: 260 MIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 304
>pdb|3MTL|A Chain A, Crystal Structure Of The Pctaire1 Kinase In Complex With
Ind E804
Length = 324
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 51/205 (24%), Positives = 87/205 (42%), Gaps = 33/205 (16%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKME------------VVGSMDHE 372
LG+GT+ T YK +L D V+ KE R + E ++ + H
Sbjct: 10 LGEGTYATVYKGK---------SKLTDNLVALKEIRLEHEEGAPCTAIREVSLLKDLKHA 60
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
N+V L ++ LV +Y+ L G +N R +AY
Sbjct: 61 NIVTLHDIIHTEKSLTLVFEYLDKDLKQYL----DDCGNI-INMHNVKLFLFQLLRGLAY 115
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS-PSST-PNRIDG--YRAPEV-T 487
H + H ++K N+L+++ E +++DFGLA S P+ T N + YR P++
Sbjct: 116 CHRQKVL--HRDLKPQNLLINERGELKLADFGLARAKSIPTKTYDNEVVTLWYRPPDILL 173
Query: 488 DARKVSQKADVYSFGVLLLELLTGK 512
+ S + D++ G + E+ TG+
Sbjct: 174 GSTDYSTQIDMWGVGCIFYEMATGR 198
>pdb|2WEI|A Chain A, Crystal Structure Of The Kinase Domain Of Cryptosporidium
Parvum Calcium Dependent Protein Kinase In Complex With
3- Mb-Pp1
Length = 287
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 324 VLGKGTFGTAYKATLEMGIV-VAVKRLKDVTVSEKE----FREKMEVVGSMDHENLVPLR 378
+LGKG+FG K + AVK + + K+ RE +E++ +DH N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-VELLKKLDHPNIMKLF 87
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+V + G L + R + + + I Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 439 ANSHGNIKSSNILLS---KSYEARISDFGLAH-LASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K NILL K + +I DFGL+ + +RI Y APEV
Sbjct: 143 V--HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TY 199
Query: 493 SQKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
+K DV+S GV+L LL+G P + + DLP+W
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3DFA|A Chain A, Crystal Structure Of Kinase Domain Of Calcium-dependent
Protein Kinase Cgd3_920 From Cryptosporidium Parvum
Length = 286
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 59/227 (25%), Positives = 92/227 (40%), Gaps = 30/227 (13%)
Query: 324 VLGKGTFGTAYKATLEMGIV-VAVKRLKDVTVSEKE----FREKMEVVGSMDHENLVPLR 378
+LGKG+FG K + AVK + + K+ RE +E++ +DH N++ L
Sbjct: 29 MLGKGSFGEVLKCKDRITQQEYAVKVINKASAKNKDTSTILRE-VELLKKLDHPNIMKLF 87
Query: 379 AYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGP 438
+V + G L + R + + + I Y+H
Sbjct: 88 EILEDSSSFYIVGELYTGGELF-----DEIIKRKRFSEHDAARIIKQVFSGITYMHKHNI 142
Query: 439 ANSHGNIKSSNILLS---KSYEARISDFGLAH-LASPSSTPNRIDG--YRAPEVTDARKV 492
H ++K NILL K + +I DFGL+ + +RI Y APEV
Sbjct: 143 V--HRDLKPENILLESKEKDCDIKIIDFGLSTCFQQNTKMKDRIGTAYYIAPEVLRG-TY 199
Query: 493 SQKADVYSFGVLLLELLTGKAP----------TQALLNEEGVDLPRW 529
+K DV+S GV+L LL+G P + + DLP+W
Sbjct: 200 DEKCDVWSAGVILYILLSGTPPFYGKNEYDILKRVETGKYAFDLPQW 246
>pdb|3TKU|A Chain A, Mrck Beta In Complex With Fasudil
pdb|3TKU|B Chain B, Mrck Beta In Complex With Fasudil
Length = 433
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 51/249 (20%)
Query: 323 EVLGKGTFGTAYKATLEMG---IVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENLV 375
+V+G+G FG A ++M + A+K L + ++ FRE+ +V+ + D + +
Sbjct: 96 KVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 153
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG----ASRAIA 431
L + + LV DY G L LL ++ + P E + +G A +I
Sbjct: 154 ALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLP---EDMARFYIGEMVLAIDSIH 208
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDF---------GLAHLASPSSTPNRIDGYR 482
LH H +IK N+LL + R++DF G + TP+ Y
Sbjct: 209 QLHY-----VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD----YI 259
Query: 483 APEVTDAR-----KVSQKADVYSFGVLLLELLTGKAPTQA----------LLNEEGVDLP 527
+PE+ A K + D +S GV + E+L G+ P A + +EE P
Sbjct: 260 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 319
Query: 528 RWVQSVVKE 536
V V +E
Sbjct: 320 SHVTDVSEE 328
>pdb|3F69|A Chain A, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
pdb|3F69|B Chain B, Crystal Structure Of The Mycobacterium Tuberculosis Pknb
Mutant Kinase Domain In Complex With Kt5720
Length = 311
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 50/98 (51%), Gaps = 13/98 (13%)
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG----- 480
A +A+ + H G H ++K +NIL+S + ++ DFG+A + S N +
Sbjct: 125 ACQALNFSHQNG--IIHRDVKPANILISATNAVKVVDFGIARAIADSG--NSVXQTAAVI 180
Query: 481 ----YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y +PE V ++DVYS G +L E+LTG+ P
Sbjct: 181 GTAQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3ENM|A Chain A, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|B Chain B, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|C Chain C, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
pdb|3ENM|D Chain D, The Structure Of The Map2k Mek6 Reveals An Autoinhibitory
Dimer
Length = 316
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/234 (23%), Positives = 103/234 (44%), Gaps = 33/234 (14%)
Query: 301 NLVFFGKGD----RAFDLEDLLRASAEVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVS 355
NL F G + +A DLE + LG+G +G K + G + AVKR++ TV+
Sbjct: 19 NLYFQGAXENFEVKADDLEPIXE-----LGRGAYGVVEKXRHVPSGQIXAVKRIR-ATVN 72
Query: 356 EKEFREKMEVVGSMDHENLVPLRAYYYS---RDEKLLVHDYMPMGSLSALLHGNRGAGRT 412
+E + + + P +Y R+ + + + SL G+T
Sbjct: 73 SQEQKRLLXDLDISXRTVDCPFTVTFYGALFREGDVWICXELXDTSLDKFYKQVIDKGQT 132
Query: 413 PLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHL---- 468
+ + +A+ +A+ +LHSK + H ++K SN+L++ + + DFG++
Sbjct: 133 -IPEDILGKIAVSIVKALEHLHSKL-SVIHRDVKPSNVLINALGQVKXCDFGISGYLVDD 190
Query: 469 --------ASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P P RI+ PE+ + + S K+D++S G+ +EL + P
Sbjct: 191 VAKDIDAGCKPYXAPERIN----PEL-NQKGYSVKSDIWSLGITXIELAILRFP 239
>pdb|1PKG|A Chain A, Structure Of A C-kit Kinase Product Complex
pdb|1PKG|B Chain B, Structure Of A C-kit Kinase Product Complex
Length = 329
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLK-DVTVSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK ++E+E +++V+ + +H N
Sbjct: 45 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 104
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA----GRTP---------LNWETRS 420
+V L L++ +Y G L L R + +P L+ E
Sbjct: 105 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 164
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG 480
+ ++ +A+L SK H ++ + NILL+ +I DFGLA S + G
Sbjct: 165 SFSYQVAKGMAFLASKNCI--HRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKG 221
Query: 481 -------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
+ APE + ++DV+S+G+ L EL + G +P G+ +
Sbjct: 222 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PGMPVDSKFYK 275
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++KE +L ++ EM +++ C P RP+ ++ IE+
Sbjct: 276 MIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 320
>pdb|3QFV|A Chain A, Mrck Beta In Complex With Tpca-1
pdb|3QFV|B Chain B, Mrck Beta In Complex With Tpca-1
Length = 415
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 63/249 (25%), Positives = 104/249 (41%), Gaps = 51/249 (20%)
Query: 323 EVLGKGTFGTAYKATLEMG---IVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENLV 375
+V+G+G FG A ++M + A+K L + ++ FRE+ +V+ + D + +
Sbjct: 80 KVIGRGAFGEV--AVVKMKNTERIYAMKILNKWEMLKRAETACFREERDVLVNGDCQWIT 137
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALG----ASRAIA 431
L + + LV DY G L LL ++ + P E + +G A +I
Sbjct: 138 ALHYAFQDENHLYLVMDYYVGGDLLTLL--SKFEDKLP---EDMARFYIGEMVLAIDSIH 192
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDF---------GLAHLASPSSTPNRIDGYR 482
LH H +IK N+LL + R++DF G + TP+ Y
Sbjct: 193 QLHY-----VHRDIKPDNVLLDVNGHIRLADFGSCLKMNDDGTVQSSVAVGTPD----YI 243
Query: 483 APEVTDAR-----KVSQKADVYSFGVLLLELLTGKAPTQA----------LLNEEGVDLP 527
+PE+ A K + D +S GV + E+L G+ P A + +EE P
Sbjct: 244 SPEILQAMEDGMGKYGPECDWWSLGVCMYEMLYGETPFYAESLVETYGKIMNHEERFQFP 303
Query: 528 RWVQSVVKE 536
V V +E
Sbjct: 304 SHVTDVSEE 312
>pdb|3RGF|A Chain A, Crystal Structure Of Human Cdk8CYCC
Length = 405
Score = 47.4 bits (111), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 56/219 (25%), Positives = 97/219 (44%), Gaps = 23/219 (10%)
Query: 314 LEDLLRASAEVLGKGTFGTAY---KATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+EDL +G+GT+G Y + + A+K+++ +S RE + ++ +
Sbjct: 18 VEDLFEYEGCKVGRGTYGHVYKAKRKDGKDDKDYALKQIEGTGISMSACRE-IALLRELK 76
Query: 371 HENLVPLRAYYYSR-DEKL-LVHDYMPMGSLSAL-LHGNRGAGRTPLNWE--TRSGLALG 425
H N++ L+ + S D K+ L+ DY + H A + P+ L
Sbjct: 77 HPNVISLQKVFLSHADRKVWLLFDYAEHDLWHIIKFHRASKANKKPVQLPRGMVKSLLYQ 136
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILL----SKSYEARISDFGLAHL-ASPSSTPNRID- 479
I YLH+ H ++K +NIL+ + +I+D G A L SP +D
Sbjct: 137 ILDGIHYLHANWVL--HRDLKPANILVMGEGPERGRVKIADMGFARLFNSPLKPLADLDP 194
Query: 480 -----GYRAPE-VTDARKVSQKADVYSFGVLLLELLTGK 512
YRAPE + AR ++ D+++ G + ELLT +
Sbjct: 195 VVVTFWYRAPELLLGARHYTKAIDIWAIGCIFAELLTSE 233
>pdb|1PHK|A Chain A, Two Structures Of The Catalytic Domain Of Phosphorylase,
Kinase: An Active Protein Kinase Complexed With
Nucleotide, Substrate-Analogue And Product
Length = 298
Score = 47.4 bits (111), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 346 VKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHG 405
V+ L++ T+ E + K+ H N++ L+ Y + LV D M G L L
Sbjct: 63 VQELREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 406 NRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL 465
+ L+ + + I LH H ++K NILL +++DFG
Sbjct: 116 ---TEKVTLSEKETRKIMRALLEVICALHKLNIV--HRDLKPENILLDDDMNIKLTDFGF 170
Query: 466 AHLASPSSTPNRIDG---YRAPEVTDARK------VSQKADVYSFGVLLLELLTGKAP 514
+ P + G Y APE+ + ++ D++S GV++ LL G P
Sbjct: 171 SCQLDPGEKLREVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|1RJB|A Chain A, Crystal Structure Of Flt3
Length = 344
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 60/223 (26%), Positives = 94/223 (42%), Gaps = 39/223 (17%)
Query: 323 EVLGKGTFGTAYKATLE------MGIVVAVKRLKD-VTVSEKEFR----EKMEVVGSMDH 371
+VLG G FG AT + I VAVK LK+ SE+E + M +GS H
Sbjct: 51 KVLGSGAFGKVMNATAYGISKTGVSIQVAVKMLKEKADSSEREALMSELKMMTQLGS--H 108
Query: 372 ENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA-GRTPLNWETRSGL-------- 422
EN+V L L+ +Y G L L R + +E + L
Sbjct: 109 ENIVNLLGACTLSGPIYLIFEYCCYGDLLNYLRSKREKFSEDEIEYENQKRLEEEEDLNV 168
Query: 423 ---------ALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH-LASPS 472
A ++ + +L K H ++ + N+L++ +I DFGLA + S S
Sbjct: 169 LTFEDLLCFAYQVAKGMEFLEFKSCV--HRDLAARNVLVTHGKVVKICDFGLARDIMSDS 226
Query: 473 STPNRIDG-----YRAPEVTDARKVSQKADVYSFGVLLLELLT 510
+ R + + APE + K+DV+S+G+LL E+ +
Sbjct: 227 NYVVRGNARLPVKWMAPESLFEGIYTIKSDVWSYGILLWEIFS 269
>pdb|1OMW|A Chain A, Crystal Structure Of The Complex Between G Protein-Coupled
Receptor Kinase 2 And Heterotrimeric G Protein Beta 1
And Gamma 2 Subunits
pdb|1YM7|A Chain A, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|B Chain B, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|C Chain C, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|1YM7|D Chain D, G Protein-Coupled Receptor Kinase 2 (Grk2)
pdb|2BCJ|A Chain A, Crystal Structure Of G Protein-coupled Receptor Kinase 2
In Complex With Galpha-q And Gbetagamma Subunits
pdb|3UZS|A Chain A, Structure Of The C13.28 Rna Aptamer Bound To The G
Protein-Coupled Receptor Kinase 2-Heterotrimeric G
Protein Beta 1 And Gamma 2 Subunit Complex
pdb|3UZT|A Chain A, Structure Of The C13.18 Rna Aptamer In Complex With G
Protein-Coupled Receptor Kinase 2
Length = 689
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 324 VLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKE-------FREKMEVVGSMDHENLV 375
++G+G FG Y + G + A+K L + K+ R + +V + D +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNW---ETRSGLALGASRAIAY 432
+ +++ D+ + D M G L L + + + E GL +R + Y
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DGYRAPEV-TDA 489
++K +NILL + RISD GLA S + GY APEV
Sbjct: 316 ----------RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
AD +S G +L +LL G +P
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3PSC|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits
pdb|3PVU|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd101)
pdb|3PVW|A Chain A, Bovine Grk2 In Complex With Gbetagamma Subunits And A
Selective Kinase Inhibitor (Cmpd103a)
Length = 695
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 324 VLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKE-------FREKMEVVGSMDHENLV 375
++G+G FG Y + G + A+K L + K+ R + +V + D +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNW---ETRSGLALGASRAIAY 432
+ +++ D+ + D M G L L + + + E GL +R + Y
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DGYRAPEV-TDA 489
++K +NILL + RISD GLA S + GY APEV
Sbjct: 316 ----------RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
AD +S G +L +LL G +P
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|1NXK|A Chain A, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|B Chain B, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|C Chain C, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
pdb|1NXK|D Chain D, Crystal Structure Of Staurosporine Bound To Map Kap Kinase
2
Length = 400
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 91/220 (41%), Gaps = 39/220 (17%)
Query: 316 DLLRASAEVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEKEFR------EKMEV 365
D + +++VLG G G K T E A+K L+D + +E + +
Sbjct: 61 DDYKVTSQVLGLGINGKVLQIFNKRTQEK---FALKXLQDCPKARREVELHWRASQCPHI 117
Query: 366 VGSMD-HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
V +D +ENL Y R L+V + + G L + + G S +
Sbjct: 118 VRIVDVYENL------YAGRKCLLIVXECLDGGELFSRIQDR---GDQAFTEREASEIXK 168
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEA--RISDFGLAH-------LASPSST 474
AI YLHS A H ++K N+L SK A +++DFG A L +P T
Sbjct: 169 SIGEAIQYLHSINIA--HRDVKPENLLYTSKRPNAILKLTDFGFAKETTSHNSLTTPCYT 226
Query: 475 PNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
P Y APEV K + D +S GV+ LL G P
Sbjct: 227 PY----YVAPEVLGPEKYDKSCDXWSLGVIXYILLCGYPP 262
>pdb|3CIK|A Chain A, Human Grk2 In Complex With Gbetagamma Subunits
pdb|3V5W|A Chain A, Human G Protein-Coupled Receptor Kinase 2 In Complex With
Soluble Gbetagamma Subunits And Paroxetine
Length = 689
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 324 VLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKE-------FREKMEVVGSMDHENLV 375
++G+G FG Y + G + A+K L + K+ R + +V + D +V
Sbjct: 196 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 255
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNW---ETRSGLALGASRAIAY 432
+ +++ D+ + D M G L L + + + E GL +R + Y
Sbjct: 256 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 315
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DGYRAPEV-TDA 489
++K +NILL + RISD GLA S + GY APEV
Sbjct: 316 ----------RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 365
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
AD +S G +L +LL G +P
Sbjct: 366 VAYDSSADWFSLGCMLFKLLRGHSP 390
>pdb|3KRW|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Soak)
pdb|3KRX|A Chain A, Human Grk2 In Complex With Gbetgamma Subunits And Balanol
(Co-Crystal)
Length = 688
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 53/205 (25%), Positives = 85/205 (41%), Gaps = 24/205 (11%)
Query: 324 VLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKE-------FREKMEVVGSMDHENLV 375
++G+G FG Y + G + A+K L + K+ R + +V + D +V
Sbjct: 195 IIGRGGFGEVYGCRKADTGKMYAMKCLDKKRIKMKQGETLALNERIMLSLVSTGDCPFIV 254
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNW---ETRSGLALGASRAIAY 432
+ +++ D+ + D M G L L + + + E GL +R + Y
Sbjct: 255 CMSYAFHTPDKLSFILDLMNGGDLHYHLSQHGVFSEADMRFYAAEIILGLEHMHNRFVVY 314
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI--DGYRAPEV-TDA 489
++K +NILL + RISD GLA S + GY APEV
Sbjct: 315 ----------RDLKPANILLDEHGHVRISDLGLACDFSKKKPHASVGTHGYMAPEVLQKG 364
Query: 490 RKVSQKADVYSFGVLLLELLTGKAP 514
AD +S G +L +LL G +P
Sbjct: 365 VAYDSSADWFSLGCMLFKLLRGHSP 389
>pdb|3ORI|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|B Chain B, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|C Chain C, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORI|D Chain D, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 1)
pdb|3ORK|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 2)
pdb|3ORL|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 3)
pdb|3ORO|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 4)
pdb|3ORP|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 5)
pdb|3ORT|A Chain A, Mycobacterium Tuberculosis Pknb Kinase Domain L33d Mutant
(Crystal Form 6)
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPS----STPNRIDG- 480
A +A+ + H G H ++K +NI++S + ++ DFG+A + S + + G
Sbjct: 125 ACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 481 --YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y +PE V ++DVYS G +L E+LTG+ P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|1T45|A Chain A, Structural Basis For The Autoinhibition And Sti-571
Inhibition Of C- Kit Tyrosine Kinase
Length = 331
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLK-DVTVSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK ++E+E +++V+ + +H N
Sbjct: 47 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 106
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA----GRTP---------LNWETRS 420
+V L L++ +Y G L L R + +P L+ E
Sbjct: 107 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 166
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG 480
+ ++ +A+L SK H ++ + NILL+ +I DFGLA S + G
Sbjct: 167 SFSYQVAKGMAFLASKNCI--HRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKG 223
Query: 481 -------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
+ APE + ++DV+S+G+ L EL + G +P G+ +
Sbjct: 224 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PGMPVDSKFYK 277
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++KE +L ++ EM +++ C P RP+ ++ IE+
Sbjct: 278 MIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 322
>pdb|3F61|A Chain A, Crystal Structure Of M. Tuberculosis Pknb
Leu33aspVAL222ASP DOUBLE MUTANT IN COMPLEX WITH ADP
Length = 311
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/96 (31%), Positives = 51/96 (53%), Gaps = 9/96 (9%)
Query: 426 ASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPS----STPNRIDG- 480
A +A+ + H G H ++K +NI++S + ++ DFG+A + S + + G
Sbjct: 125 ACQALNFSHQNG--IIHRDVKPANIMISATNAVKVMDFGIARAIADSGNSVTQTAAVIGT 182
Query: 481 --YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y +PE V ++DVYS G +L E+LTG+ P
Sbjct: 183 AQYLSPEQARGDSVDARSDVYSLGCVLYEVLTGEPP 218
>pdb|3G0E|A Chain A, Kit Kinase Domain In Complex With Sunitinib
Length = 336
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 70/295 (23%), Positives = 124/295 (42%), Gaps = 49/295 (16%)
Query: 323 EVLGKGTFGTAYKATL------EMGIVVAVKRLK-DVTVSEKE-FREKMEVVGSM-DHEN 373
+ LG G FG +AT + + VAVK LK ++E+E +++V+ + +H N
Sbjct: 52 KTLGAGAFGKVVEATAYGLIKSDAAMTVAVKMLKPSAHLTEREALMSELKVLSYLGNHMN 111
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGA----GRTP---------LNWETRS 420
+V L L++ +Y G L L R + +P L+ E
Sbjct: 112 IVNLLGACTIGGPTLVITEYCCYGDLLNFLRRKRDSFICSKTSPAIMEDDELALDLEDLL 171
Query: 421 GLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG 480
+ ++ +A+L SK H ++ + NILL+ +I DFGLA S + G
Sbjct: 172 SFSYQVAKGMAFLASKNCI--HRDLAARNILLTHGRITKICDFGLARDIKNDSN-YVVKG 228
Query: 481 -------YRAPEVTDARKVSQKADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQS 532
+ APE + ++DV+S+G+ L EL + G +P G+ +
Sbjct: 229 NARLPVKWMAPESIFNCVYTFESDVWSYGIFLWELFSLGSSPY------PGMPVDSKFYK 282
Query: 533 VVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEE 587
++KE +L ++ EM +++ C P RP+ ++ IE+
Sbjct: 283 MIKE-------GFRMLSPEHAPAEMYDIMK---TCWDADPLKRPTFKQIVQLIEK 327
>pdb|3M19|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
pdb|3M19|B Chain B, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R5.1
Length = 251
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 47/103 (45%), Gaps = 2/103 (1%)
Query: 61 NLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAK 120
+LTEL T+ L N L F L+ L LYL GN G+ L L L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 121 NNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQF 163
N + F+KLT L TL L NQL S+P GAF L +
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH-GAFDRLGKL 181
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 62 LTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKN 121
LT+L ++L +N L+ F L+ L L L N + G+ L L +L L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 122 NFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAF---SSLAQFNVSFNKLNGSIP--- 175
S F++LT+L L L NQL SIP GAF ++L ++S N+L S+P
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP-AGAFDKLTNLQTLSLSTNQLQ-SVPHGA 174
Query: 176 -KRFARLPSSAFEGNSL 191
R +L + GN
Sbjct: 175 FDRLGKLQTITLFGNQF 191
Score = 30.0 bits (66), Expect = 4.1, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 83 FAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYL 142
F L+ L L L N G+ L L L LA N + F+ LT+L LYL
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 143 QENQLTGSIPDLGAF---SSLAQFNVSFNKLNGSIP 175
NQL S+P G F + L + ++ N+L SIP
Sbjct: 115 GGNQLK-SLPS-GVFDRLTKLKELRLNTNQLQ-SIP 147
>pdb|1QL6|A Chain A, The Catalytic Mechanism Of Phosphorylase Kinase Probed By
Mutational Studies
Length = 298
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 43/178 (24%), Positives = 72/178 (40%), Gaps = 21/178 (11%)
Query: 346 VKRLKDVTVSEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHG 405
V+ L++ T+ E + K+ H N++ L+ Y + LV D M G L L
Sbjct: 63 VQELREATLKEVDILRKVS-----GHPNIIQLKDTYETNTFFFLVFDLMKKGELFDYL-- 115
Query: 406 NRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGL 465
+ L+ + + I LH H ++K NILL +++DFG
Sbjct: 116 ---TEKVTLSEKETRKIMRALLEVICALHKLNIV--HRDLKPENILLDDDMNIKLTDFGF 170
Query: 466 AHLASPSSTPNRIDG---YRAPEVTDARK------VSQKADVYSFGVLLLELLTGKAP 514
+ P + G Y APE+ + ++ D++S GV++ LL G P
Sbjct: 171 SCQLDPGEKLRSVCGTPSYLAPEIIECSMNDNHPGYGKEVDMWSTGVIMYTLLAGSPP 228
>pdb|3VHE|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With A
Novel Pyrrolopyrimidine Inhibitor
Length = 359
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 40/160 (25%), Positives = 70/160 (43%), Gaps = 23/160 (14%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR------APEVTDARKVSQK 495
H ++ + NILLS+ +I DFGLA R R APE R + +
Sbjct: 216 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 275
Query: 496 ADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
+DV+SFGVLL E+ + G +P + + EE+ + E R + +
Sbjct: 276 SDVWSFGVLLWEIFSLGASPYPGV--------------KIDEEFCRRL--KEGTRMRAPD 319
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQIEEICRSSLQ 594
++ Q ++C P RP+ +E+ + + +++ Q
Sbjct: 320 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHLGNLLQANAQ 359
>pdb|3M18|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor
Vlra.R2.1 In Complex With Hen Egg Lysozyme
Length = 251
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 47/105 (44%), Gaps = 2/105 (1%)
Query: 61 NLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAK 120
+LTEL T+ L N L F L+ L LYL GN G+ L L L L
Sbjct: 81 DLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGNQLKSLPSGVFDRLTKLKELRLNT 140
Query: 121 NNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQFNV 165
N + F+KLT L TL L NQL S+P GAF L +
Sbjct: 141 NQLQSIPAGAFDKLTNLQTLSLSTNQLQ-SVPH-GAFDRLGKLQT 183
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 64/137 (46%), Gaps = 10/137 (7%)
Query: 62 LTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKN 121
LT+L ++L +N L+ F L+ L L L N + G+ L L +L L N
Sbjct: 58 LTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYLGGN 117
Query: 122 NFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAF---SSLAQFNVSFNKLNGSIP--- 175
S F++LT+L L L NQL SIP GAF ++L ++S N+L S+P
Sbjct: 118 QLKSLPSGVFDRLTKLKELRLNTNQLQ-SIP-AGAFDKLTNLQTLSLSTNQLQ-SVPHGA 174
Query: 176 -KRFARLPSSAFEGNSL 191
R +L + GN
Sbjct: 175 FDRLGKLQTITLFGNQF 191
Score = 30.4 bits (67), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 34/83 (40%), Gaps = 9/83 (10%)
Query: 62 LTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKN 121
LT+L + L N L+ F KL+NL+ L L N G LG L + L N
Sbjct: 130 LTKLKELRLNTNQLQSIPAGAFDKLTNLQTLSLSTNQLQSVPHGAFDRLGKLQTITLFGN 189
Query: 122 NFSGTISADFNKLTRLGTLYLQE 144
F +R TLYL +
Sbjct: 190 QFD---------CSRCETLYLSQ 203
Score = 29.6 bits (65), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 44/96 (45%), Gaps = 6/96 (6%)
Query: 83 FAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYL 142
F L+ L L L N G+ L L L LA N + F+ LT+L LYL
Sbjct: 55 FRGLTKLTWLNLDYNQLQTLSAGVFDDLTELGTLGLANNQLASLPLGVFDHLTQLDKLYL 114
Query: 143 QENQLTGSIPDLGAF---SSLAQFNVSFNKLNGSIP 175
NQL S+P G F + L + ++ N+L SIP
Sbjct: 115 GGNQLK-SLPS-GVFDRLTKLKELRLNTNQLQ-SIP 147
>pdb|2QG5|A Chain A, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|B Chain B, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
pdb|2QG5|D Chain D, Cryptosporidium Parvum Calcium Dependent Protein Kinase
Cgd7_1840
Length = 294
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 59/235 (25%), Positives = 101/235 (42%), Gaps = 29/235 (12%)
Query: 301 NLVFFG--KGD--RAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVV--AVKRLKDVTV 354
NL F G KGD + + LE+ +G+G++G K ++ G + A K++ V
Sbjct: 13 NLYFQGSTKGDINQYYTLEN-------TIGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFV 64
Query: 355 SEKE-FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTP 413
+ + F++++E++ S+DH N++ L + + LV + G L R +
Sbjct: 65 EDVDRFKQEIEIMKSLDHPNIIRLYETFEDNTDIYLVMELCTGGELF-----ERVVHKRV 119
Query: 414 LNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILL---SKSYEARISDFGLAHLAS 470
+ + A+AY H A H ++K N L S ++ DFGLA
Sbjct: 120 FRESDAARIMKDVLSAVAYCHKLNVA--HRDLKPENFLFLTDSPDSPLKLIDFGLAARFK 177
Query: 471 PSSTPNRIDG---YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
P G Y +P+V + + D +S GV++ LL G P A + E
Sbjct: 178 PGKMMRTKVGTPYYVSPQVLEGL-YGPECDEWSAGVMMYVLLCGYPPFSAPTDXE 231
>pdb|3HKO|A Chain A, Crystal Structure Of A Cdpk Kinase Domain From
Cryptosporidium Parvum, Cgd7_40
Length = 345
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 61/132 (46%), Gaps = 26/132 (19%)
Query: 403 LHGNRGAGRTPLNWETRSGLALGASR----AIAYLHSKGPANSHGNIKSSNILLS--KSY 456
++G+ R L++ R L R A+ YLH++G H +IK N L S KS+
Sbjct: 150 INGSIHGFRESLDFVQREKLISNIMRQIFSALHYLHNQGIC--HRDIKPENFLFSTNKSF 207
Query: 457 EARISDFGLAH------------LASPSSTPNRIDGYRAPEVTDARKVSQ--KADVYSFG 502
E ++ DFGL+ + + + TP + APEV + S K D +S G
Sbjct: 208 EIKLVDFGLSKEFYKLNNGEYYGMTTKAGTPY----FVAPEVLNTTNESYGPKCDAWSAG 263
Query: 503 VLLLELLTGKAP 514
VLL LL G P
Sbjct: 264 VLLHLLLMGAVP 275
>pdb|3H4J|B Chain B, Crystal Structure Of Pombe Ampk Kdaid Fragment
pdb|3H4J|A Chain A, Crystal Structure Of Pombe Ampk Kdaid Fragment
Length = 336
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 49/94 (52%), Gaps = 14/94 (14%)
Query: 429 AIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH-------LASPSSTPNRIDGY 481
AI Y H H ++K N+LL + +I+DFGL++ L + +PN Y
Sbjct: 120 AIEYCHRHKIV--HRDLKPENLLLDDNLNVKIADFGLSNIMTDGNFLKTSCGSPN----Y 173
Query: 482 RAPEVTDARKVS-QKADVYSFGVLLLELLTGKAP 514
APEV + + + + DV+S G++L +L G+ P
Sbjct: 174 AAPEVINGKLYAGPEVDVWSCGIVLYVMLVGRLP 207
>pdb|1P9A|G Chain G, Crystal Structure Of N-terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-alpha At 1.7 Angstrom
Resolution
pdb|1QYY|A Chain A, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
pdb|1QYY|G Chain G, Crystal Structure Of N-Terminal Domain Of Human Platelet
Receptor Glycoprotein Ib-Alpha At 2.8 Angstrom
Resolution
Length = 290
Score = 46.6 bits (109), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA NN + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|1BI8|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI8|C Chain C, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structures Cdk6-P19ink4d Inhibitor Complex
pdb|1BI7|A Chain A, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From
The Structure Of The Cdk6-P16ink4a Tumor Suppressor
Complex
pdb|1BLX|A Chain A, P19ink4dCDK6 COMPLEX
pdb|1G3N|A Chain A, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
pdb|1G3N|E Chain E, Structure Of A P18(Ink4c)-Cdk6-K-Cyclin Ternary Complex
Length = 326
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 325 LGKGTFGTAYKAT--LEMGIVVAVKRLKDVTVSE----KEFREK--MEVVGSMDHENLVP 376
+G+G +G +KA G VA+KR++ T E RE + + + +H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 377 L----RAYYYSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
L R+ KL LV +++ L+ L G + ET + R +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG---VPTETIKDMMFQLLRGLD 134
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID---GYRAPEVTD 488
+LHS H ++K NIL++ S + +++DFGLA + S + YRAPEV
Sbjct: 135 FLHSHRVV--HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 489 ARKVSQKADVYSFGVLLLELLTGK 512
+ D++S G + E+ K
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|1KOB|A Chain A, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
pdb|1KOB|B Chain B, Twitchin Kinase Fragment (Aplysia), Autoregulated Protein
Kinase Domain
Length = 387
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 49/211 (23%), Positives = 87/211 (41%), Gaps = 17/211 (8%)
Query: 311 AFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEV--VGS 368
+D D+L E LG G FG ++ + V V + + ++ K E+ +
Sbjct: 49 VYDYYDIL----EELGSGAFGVVHRCVEKATGRVFVAKFINTPYPLDKYTVKNEISIMNQ 104
Query: 369 MDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASR 428
+ H L+ L + + E +L+ +++ G L + A ++ A
Sbjct: 105 LHHPKLINLHDAFEDKYEMVLILEFLSGGELFDRI----AAEDYKMSEAEVINYMRQACE 160
Query: 429 AIAYLHSKGPANSHGNIKSSNILL--SKSYEARISDFGLAHLASPSSTPNRIDG---YRA 483
+ ++H H +IK NI+ K+ +I DFGLA +P + A
Sbjct: 161 GLKHMHEHSIV--HLDIKPENIMCETKKASSVKIIDFGLATKLNPDEIVKVTTATAEFAA 218
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
PE+ D V D+++ GVL LL+G +P
Sbjct: 219 PEIVDREPVGFYTDMWAIGVLGYVLLSGLSP 249
>pdb|3GNI|B Chain B, Structure Of Strad And Mo25
Length = 389
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 324 VLGKG-----TFGTA-YKATLEMGIVVAVKRLKDVTVSEKE---FREKMEVVGSMDHENL 374
V+GKG T A YK T G V V+R+ S + + ++ V +H N+
Sbjct: 32 VIGKGFEDLMTVNLARYKPT---GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 88
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
VP RA + + +E +V +M GS L+ + G +N + + G +A+ Y+H
Sbjct: 89 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG---MNELAIAYILQGVLKALDYIH 145
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-------------IDGY 481
G H ++K+S+IL+S + +S GL S S R + +
Sbjct: 146 HMGYV--HRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 201
Query: 482 RAPEV--TDARKVSQKADVYSFGVLLLELLTGKAP------TQALLNEEGVDLP 527
+PEV + + K+D+YS G+ EL G P TQ LL + +P
Sbjct: 202 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP 255
>pdb|3PMH|G Chain G, Mechanism Of Sulfotyrosine-Mediated Glycoprotein Ib
Interaction With Two Distinct Alpha-Thrombin Sites
Length = 290
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA NN + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|3NR9|A Chain A, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|B Chain B, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
pdb|3NR9|C Chain C, Structure Of Human Cdc2-Like Kinase 2 (Clk2)
Length = 368
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 60/250 (24%), Positives = 98/250 (39%), Gaps = 37/250 (14%)
Query: 306 GKGDRAFDLEDLLRASAEV---LGKGTFGTAYKATLEM--GIVVAVKRLKDVTVSEKEFR 360
+G + + D L+ E+ LG+GTFG + G VA+K +K+V ++ R
Sbjct: 19 AEGHLIYHVGDWLQERYEIVSTLGEGTFGRVVQCVDHRRGGARVALKIIKNVEKYKEAAR 78
Query: 361 EKMEVVGSM-----DHENL-VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPL 414
++ V+ + D++NL V + ++ + + + + + L N P
Sbjct: 79 LEINVLEKINEKDPDNKNLCVQMFDWFDYHGHMCISFELLGLSTFDFLKDNNY----LPY 134
Query: 415 NWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS-------------------KS 455
+A +A+ +LH +H ++K NIL KS
Sbjct: 135 PIHQVRHMAFQLCQAVKFLHDNKL--THTDLKPENILFVNSDYELTYNLEKKRDERSVKS 192
Query: 456 YEARISDFGLAHL-ASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
R+ DFG A ST YRAPEV SQ DV+S G ++ E G
Sbjct: 193 TAVRVVDFGSATFDHEHHSTIVSTRHYRAPEVILELGWSQPCDVWSIGCIIFEYYVGFTL 252
Query: 515 TQALLNEEGV 524
Q N E +
Sbjct: 253 FQTHDNREHL 262
>pdb|1OOK|G Chain G, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Human Alpha-thrombin
Length = 290
Score = 46.2 bits (108), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA NN + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|1JOW|B Chain B, Crystal Structure Of A Complex Of Human Cdk6 And A Viral
Cyclin
pdb|1XO2|B Chain B, Crystal Structure Of A Human Cyclin-Dependent Kinase 6
Complex With A Flavonol Inhibitor, Fisetin
pdb|2EUF|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclin In Complex With The
Inhibitor Pd0332991
pdb|2F2C|B Chain B, X-Ray Structure Of Human Cdk6-Vcyclinwith The Inhibitor
Aminopurvalanol
Length = 308
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 325 LGKGTFGTAYKAT--LEMGIVVAVKRLKDVTVSE----KEFREK--MEVVGSMDHENLVP 376
+G+G +G +KA G VA+KR++ T E RE + + + +H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 377 L----RAYYYSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
L R+ KL LV +++ L+ L G + ET + R +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG---VPTETIKDMMFQLLRGLD 134
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID---GYRAPEVTD 488
+LHS H ++K NIL++ S + +++DFGLA + S + YRAPEV
Sbjct: 135 FLHSHRVV--HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 489 ARKVSQKADVYSFGVLLLELLTGK 512
+ D++S G + E+ K
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|3EB0|A Chain A, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
pdb|3EB0|C Chain C, Crystal Structure Of Cgd4_240 From Cryptosporidium Parvum
In Complex With Indirubin E804
Length = 383
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 105/240 (43%), Gaps = 59/240 (24%)
Query: 322 AEVLGKGTFGTAYKA-TLEMGIVVAVKR-LKDVTVSEKEFREKMEVVGSMDHENLVPLRA 379
+ LG G+FG + +E G A+K+ L+D +E ++++ +DH N++ L
Sbjct: 12 GKTLGTGSFGIVCEVFDIESGKRFALKKVLQDPRYKNRE----LDIMKVLDHVNIIKLVD 67
Query: 380 YYYSR-DEKL-------------------------------------LVHDYMPMGSLSA 401
Y+Y+ DE+ ++ +Y+P +L
Sbjct: 68 YFYTTGDEEPKPPQPPDDHNKLGGKNNGVNNHHKSVIVNPSQNKYLNVIMEYVP-DTLHK 126
Query: 402 LLHGNRGAGRT-PLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILL-SKSYEAR 459
+L +GR+ P+N + L RA+ ++HS G H +IK N+L+ SK +
Sbjct: 127 VLKSFIRSGRSIPMNLISIYIYQL--FRAVGFIHSLGIC--HRDIKPQNLLVNSKDNTLK 182
Query: 460 ISDFGLAHLASPSSTP-----NRIDGYRAPEVT-DARKVSQKADVYSFGVLLLELLTGKA 513
+ DFG A PS +R YRAPE+ A + + D++S G + EL+ GK
Sbjct: 183 LCDFGSAKKLIPSEPSVAXICSRF--YRAPELMLGATEYTPSIDLWSIGCVFGELILGKP 240
>pdb|3VID|A Chain A, Crystal Structure Of Human Vegfr2 Kinase Domain With
Compound A
Length = 356
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/151 (25%), Positives = 65/151 (43%), Gaps = 23/151 (15%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDGYR------APEVTDARKVSQK 495
H ++ + NILLS+ +I DFGLA R R APE R + +
Sbjct: 214 HRDLAARNILLSEKNVVKICDFGLARDIYKDPDYVRKGDARLPLKWMAPETIFDRVYTIQ 273
Query: 496 ADVYSFGVLLLELLT-GKAPTQALLNEEGVDLPRWVQSVVKEEWTAEVFDLELLRYQNVE 554
+DV+SFGVLL E+ + G +P + + EE+ + E R + +
Sbjct: 274 SDVWSFGVLLWEIFSLGASPYPGV--------------KIDEEFCRRL--KEGTRMRAPD 317
Query: 555 EEMVQLLQLAINCTAQYPDNRPSMAEVTSQI 585
++ Q ++C P RP+ +E+ +
Sbjct: 318 YTTPEMYQTMLDCWHGEPSQRPTFSELVEHL 348
>pdb|3QA8|A Chain A, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|B Chain B, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|C Chain C, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|D Chain D, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|E Chain E, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|F Chain F, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|G Chain G, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
pdb|3QA8|H Chain H, Crystal Structure Of Inhibitor Of Kappa B Kinase Beta
Length = 676
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 35/215 (16%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEV--VGSMDHENLVPLRA 379
E LG G FG + + G VA+K+ + + R +E+ + ++H N+V R
Sbjct: 20 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 79
Query: 380 Y------YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASR----- 428
D LL +Y G L L+ +E GL G R
Sbjct: 80 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN----------QFENCCGLKEGPIRTLLSD 129
Query: 429 ---AIAYLHSKGPANSHGNIKSSNILLSKSYE---ARISDFGLAHLASPSSTPNRIDG-- 480
A+ YLH H ++K NI+L + +I D G A G
Sbjct: 130 ISSALRYLHENRII--HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTL 187
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y APE+ + +K + D +SFG L E +TG P
Sbjct: 188 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 222
>pdb|3RZF|A Chain A, Crystal Structure Of Inhibitor Of Kappab Kinase Beta
(I4122)
Length = 677
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/215 (26%), Positives = 83/215 (38%), Gaps = 35/215 (16%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKEFREKMEV--VGSMDHENLVPLRA 379
E LG G FG + + G VA+K+ + + R +E+ + ++H N+V R
Sbjct: 21 ERLGTGGFGYVLRWIHQDTGEQVAIKQCRQELSPKNRERWCLEIQIMKKLNHPNVVSARE 80
Query: 380 Y------YYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASR----- 428
D LL +Y G L L+ +E GL G R
Sbjct: 81 VPDGLQKLAPNDLPLLAMEYCEGGDLRKYLN----------QFENCCGLKEGPIRTLLSD 130
Query: 429 ---AIAYLHSKGPANSHGNIKSSNILLSKSYE---ARISDFGLAHLASPSSTPNRIDG-- 480
A+ YLH H ++K NI+L + +I D G A G
Sbjct: 131 ISSALRYLHENRII--HRDLKPENIVLQPGPQRLIHKIIDLGYAKELDQGELCTEFVGTL 188
Query: 481 -YRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
Y APE+ + +K + D +SFG L E +TG P
Sbjct: 189 QYLAPELLEQKKYTVTVDYWSFGTLAFECITGFRP 223
>pdb|3NUP|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|3NUX|A Chain A, Cdk6 (Monomeric) In Complex With Inhibitor
pdb|4AUA|A Chain A, Liganded X-ray Crystal Structure Of Cyclin Dependent
Kinase 6 (cdk6)
pdb|4EZ5|A Chain A, Cdk6 (monomeric) In Complex With Inhibitor
Length = 307
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 55/204 (26%), Positives = 91/204 (44%), Gaps = 22/204 (10%)
Query: 325 LGKGTFGTAYKAT--LEMGIVVAVKRLKDVTVSE----KEFREK--MEVVGSMDHENLVP 376
+G+G +G +KA G VA+KR++ T E RE + + + +H N+V
Sbjct: 19 IGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLETFEHPNVVR 78
Query: 377 L----RAYYYSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIA 431
L R+ KL LV +++ L+ L G + ET + R +
Sbjct: 79 LFDVCTVSRTDRETKLTLVFEHVDQ-DLTTYLDKVPEPG---VPTETIKDMMFQLLRGLD 134
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID---GYRAPEVTD 488
+LHS H ++K NIL++ S + +++DFGLA + S + YRAPEV
Sbjct: 135 FLHSHRVV--HRDLKPQNILVTSSGQIKLADFGLARIYSFQMALTSVVVTLWYRAPEVLL 192
Query: 489 ARKVSQKADVYSFGVLLLELLTGK 512
+ D++S G + E+ K
Sbjct: 193 QSSYATPVDLWSVGCIFAEMFRRK 216
>pdb|2WTK|B Chain B, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|E Chain E, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 373
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 102/234 (43%), Gaps = 40/234 (17%)
Query: 324 VLGKG-----TFGTA-YKATLEMGIVVAVKRLKDVTVSEKE---FREKMEVVGSMDHENL 374
V+GKG T A YK T G V V+R+ S + + ++ V +H N+
Sbjct: 16 VIGKGFEDLMTVNLARYKPT---GEYVTVRRINLEACSNEMVTFLQGELHVSKLFNHPNI 72
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
VP RA + + +E +V +M GS L+ + G +N + + G +A+ Y+H
Sbjct: 73 VPYRATFIADNELWVVTSFMAYGSAKDLICTHFMDG---MNELAIAYILQGVLKALDYIH 129
Query: 435 SKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR-------------IDGY 481
G H ++K+S+IL+S + +S GL S S R + +
Sbjct: 130 HMGYV--HRSVKASHILISVDGKVYLS--GLRSNLSMISHGQRQRVVHDFPKYSVKVLPW 185
Query: 482 RAPEV--TDARKVSQKADVYSFGVLLLELLTGKAP------TQALLNEEGVDLP 527
+PEV + + K+D+YS G+ EL G P TQ LL + +P
Sbjct: 186 LSPEVLQQNLQGYDAKSDIYSVGITACELANGHVPFKDMPATQMLLEKLNGTVP 239
>pdb|1P8V|A Chain A, Crystal Structure Of The Complex Of Platelet Receptor
Gpib-alpha And Alpha-thrombin At 2.6a
Length = 279
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA NN + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|1GWB|B Chain B, Structure Of Glycoprotein 1b
pdb|1GWB|A Chain A, Structure Of Glycoprotein 1b
Length = 281
Score = 45.8 bits (107), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 93 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 152
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA NN + + N L L TL LQEN L +IP G F S
Sbjct: 153 KLSLANNNLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 195
>pdb|1Z57|A Chain A, Crystal Structure Of Human Clk1 In Complex With
10z-Hymenialdisine
Length = 339
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 98/231 (42%), Gaps = 45/231 (19%)
Query: 316 DLLRASAEV---LGKGTFGTAYKATLEM--GIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
D+L A E+ LG+G FG + G VAVK +K+V + R +++V+ ++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 371 HEN------LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ V + ++ +V + + + + + + G P + +A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKS-----YEARIS--------------DFGL 465
+++ +LHS +H ++K NIL +S Y +I DFG
Sbjct: 126 QICKSVNFLHSNKL--THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 466 A-----HLASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTG 511
A H ++ ST + YRAPEV A SQ DV+S G +L+E G
Sbjct: 184 ATYDDEHHSTLVSTRH----YRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|2VAG|A Chain A, Crystal Structure Of Di-Phosphorylated Human Clk1 In
Complex With A Novel Substituted Indole Inhibitor
Length = 339
Score = 45.8 bits (107), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 56/227 (24%), Positives = 95/227 (41%), Gaps = 37/227 (16%)
Query: 316 DLLRASAEV---LGKGTFGTAYKATLEM--GIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
D+L A E+ LG+G FG + G VAVK +K+V + R +++V+ ++
Sbjct: 10 DVLSARYEIVDTLGEGAFGKVVECIDHKAGGRHVAVKIVKNVDRYCEAARSEIQVLEHLN 69
Query: 371 HEN------LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLAL 424
+ V + ++ +V + + + + + + G P + +A
Sbjct: 70 TTDPNSTFRCVQMLEWFEHHGHICIVFELLGLSTYDFI----KENGFLPFRLDHIRKMAY 125
Query: 425 GASRAIAYLHSKGPANSHGNIKSSNILLSKS-----YEARIS--------------DFGL 465
+++ +LHS +H ++K NIL +S Y +I DFG
Sbjct: 126 QICKSVNFLHSNKL--THTDLKPENILFVQSDYTEAYNPKIKRDERTLINPDIKVVDFGS 183
Query: 466 A-HLASPSSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTG 511
A + ST YRAPEV A SQ DV+S G +L+E G
Sbjct: 184 ATYDDEHHSTLVXXRHYRAPEVILALGWSQPCDVWSIGCILIEYYLG 230
>pdb|3F3Z|A Chain A, Crystal Structure Of Cryptosporidium Parvum Calcium
Dependent Protein Kinase Cgd7_1840 In Presence Of
Indirubin E804
Length = 277
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 18/207 (8%)
Query: 325 LGKGTFGTAYKATLEMGIVV--AVKRLKDVTVSEKE-FREKMEVVGSMDHENLVPLRAYY 381
+G+G++G K ++ G + A K++ V + + F++++E++ S+DH N++ L +
Sbjct: 17 IGRGSWGEV-KIAVQKGTRIRRAAKKIPKYFVEDVDRFKQEIEIMKSLDHPNIIRLYETF 75
Query: 382 YSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS 441
+ LV + G L R + + + A+AY H A
Sbjct: 76 EDNTDIYLVMELCTGGELF-----ERVVHKRVFRESDAARIMKDVLSAVAYCHKLNVA-- 128
Query: 442 HGNIKSSNILL---SKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVSQK 495
H ++K N L S ++ DFGLA P G Y +P+V + +
Sbjct: 129 HRDLKPENFLFLTDSPDSPLKLIDFGLAARFKPGKMMRTKVGTPYYVSPQVLEGL-YGPE 187
Query: 496 ADVYSFGVLLLELLTGKAPTQALLNEE 522
D +S GV++ LL G P A + E
Sbjct: 188 CDEWSAGVMMYVLLCGYPPFSAPTDXE 214
>pdb|1VZO|A Chain A, The Structure Of The N-Terminal Kinase Domain Of Msk1
Reveals A Novel Autoinhibitory Conformation For A Dual
Kinase Protein
Length = 355
Score = 45.4 bits (106), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/209 (26%), Positives = 91/209 (43%), Gaps = 24/209 (11%)
Query: 323 EVLGKGTFGTAY----KATLEMGIVVAVKRLKDVTVSEK-----EFREKMEVVGSMDHEN 373
+VLG G +G + + + G + A+K LK T+ +K R + +V+ +
Sbjct: 60 KVLGTGAYGKVFLVRKISGHDTGKLYAMKVLKKATIVQKAKTTEHTRTERQVLEHIRQSP 119
Query: 374 LVPLRAYYYSRDEKL-LVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
+ Y + + KL L+ DY+ G L H ++ T + G + A+ +
Sbjct: 120 FLVTLHYAFQTETKLHLILDYINGGEL--FTHLSQRERFTEHEVQIYVGEIV---LALEH 174
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID-----GYRAPEVT 487
LH G + +IK NILL + ++DFGL+ T D Y AP++
Sbjct: 175 LHKLGII--YRDIKLENILLDSNGHVVLTDFGLSKEFVADETERAYDFCGTIEYMAPDIV 232
Query: 488 DARKV--SQKADVYSFGVLLLELLTGKAP 514
+ D +S GVL+ ELLTG +P
Sbjct: 233 RGGDSGHDKAVDWWSLGVLMYELLTGASP 261
>pdb|1SQ0|B Chain B, Crystal Structure Of The Complex Of The Wild-Type Von
Willebrand Factor A1 Domain And Glycoprotein Ib Alpha At
2.6 Angstrom Resolution
Length = 288
Score = 44.7 bits (104), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 49/105 (46%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA N+ + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNDLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|2W5A|A Chain A, Human Nek2 Kinase Adp-Bound
pdb|2WQO|A Chain A, Structure Of Nek2 Bound To The Aminopyridine Cct241950
pdb|2XK3|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 35
pdb|2XK4|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 17
pdb|2XK6|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 36
pdb|2XK7|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 23
pdb|2XK8|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 15
pdb|2XKC|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 14
pdb|2XKD|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 12
pdb|2XKF|A Chain A, Structure Of Nek2 Bound To Aminopyrazine Compound 2
pdb|2XKE|A Chain A, Structure Of Nek2 Bound To Aminipyrazine Compound 5
pdb|2XNM|A Chain A, Structure Of Nek2 Bound To Cct
pdb|2XNN|A Chain A, Structure Of Nek2 Bound To Cct242430
pdb|2XNO|A Chain A, Structure Of Nek2 Bound To Cct243779
pdb|2XNP|A Chain A, Structure Of Nek2 Bound To Cct244858
pdb|4AFE|A Chain A, Nek2 Bound To Hybrid Compound 21
Length = 279
Score = 44.7 bits (104), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 100/231 (43%), Gaps = 29/231 (12%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFR---EKMEV 365
RA D E L +G G++G K + G ++ K L +++E E + ++ +
Sbjct: 4 RAEDYEVLY-----TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNL 58
Query: 366 VGSMDHENLVPLRAYYYSR------DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWET 418
+ + H N+V YY R +V +Y G L++++ +G R L+ E
Sbjct: 59 LRELKHPNIVR----YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEF 112
Query: 419 RSGLALGASRAIAYLHSK---GPANSHGNIKSSNILLSKSYEARISDFGLA----HLASP 471
+ + A+ H + G H ++K +N+ L ++ DFGLA H S
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 472 SSTPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
+ T Y +PE + ++K+D++S G LL EL P A +E
Sbjct: 173 AKTFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|1M10|B Chain B, Crystal Structure Of The Complex Of Glycoprotein Ib Alpha
And The Von Willebrand Factor A1 Domain
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA N + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|3MFR|A Chain A, Cask-4m Cam Kinase Domain, Native
pdb|3MFS|A Chain A, Cask-4m Cam Kinase Domain, Amppnp
pdb|3MFT|A Chain A, Cask-4m Cam Kinase Domain, Mn2+
pdb|3MFU|A Chain A, Cask-4m Cam Kinase Domain, Amppnp-Mn2+
Length = 351
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 54/212 (25%), Positives = 85/212 (40%), Gaps = 27/212 (12%)
Query: 322 AEVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHEN 373
EV+GKG F + E G AVK + DV +S ++ + + + + H +
Sbjct: 29 CEVIGKGAFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
+V L Y S +V ++M L + AG + S A+ Y
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILEALRYC 146
Query: 434 HSKGPANSHGNIKSSNILLSK---SYEARISDFGLAHLASPSS--------TPNRIDGYR 482
H H ++K N+LL+ S ++ DFG+A S TP+ +
Sbjct: 147 HDNNII--HRDVKPENVLLASKENSAPVKLGDFGVAIQLGESGLVAGGRVGTPH----FM 200
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
APEV + DV+ GV+L LL+G P
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|1M0Z|A Chain A, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
pdb|1M0Z|B Chain B, Crystal Structure Of The Von Willebrand Factor Binding
Domain Of Glycoprotein Ib Alpha
Length = 290
Score = 44.3 bits (103), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA N + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|4AZF|A Chain A, Human Dyrk2 In Complex With Leucettine L41
Length = 417
Score = 43.9 bits (102), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHE------NLV 375
+V+GKG+FG KA ++ VA+K +++ ++ E++ ++ + + N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRT-PLNWETRSGL-----ALGASRA 429
+ + R+ + + + M +L L+ N+ G + PL + + AL +R
Sbjct: 163 HMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEA--RISDFG---LAHLASPSSTPNRIDGYRAP 484
I H ++K NILL + + ++ DFG H + +R YRAP
Sbjct: 222 I-----------HCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF--YRAP 268
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTG 511
EV + D++S G +L ELLTG
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3P72|A Chain A, Structure Of Platelet Glycoprotein 1b Alpha With A Bound
Peptide Inhibitor
Length = 269
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA N + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|3OJA|B Chain B, Crystal Structure Of Lrim1APL1C COMPLEX
Length = 597
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 49/176 (27%), Positives = 70/176 (39%), Gaps = 19/176 (10%)
Query: 35 FCTGERVTMLRFPGMGLSGQLPIAIGNLTEL-------------HTVS---LRFNALRGT 78
T + TM + P L + + NL +L HT+ + FNA+R
Sbjct: 55 IVTFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYL 114
Query: 79 IPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLG 138
P F + L L L+ N S G+ + L L+++ NN F T L
Sbjct: 115 PPHVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQ 174
Query: 139 TLYLQENQLTGSIPDLGAFSSLAQFNVSFNKLNG-SIPKRFARLPSSAFEGNSLCG 193
L L N+LT DL SL NVS+N L+ +IP L +S N + G
Sbjct: 175 NLQLSSNRLTHV--DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 228
>pdb|1U0N|D Chain D, The Ternary Von Willebrand Factor A1-Glycoprotein Ibalpha-
Botrocetin Complex
Length = 265
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 48/105 (45%), Gaps = 2/105 (1%)
Query: 55 LPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLI 114
LP+ L L + + FN L L L+ LYL+GN PGLL L
Sbjct: 92 LPLLGQTLPALTVLDVSFNRLTSLPLGALRGLGELQELYLKGNELKTLPPGLLTPTPKLE 151
Query: 115 RLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSS 159
+L+LA N + + N L L TL LQEN L +IP G F S
Sbjct: 152 KLSLANNQLTELPAGLLNGLENLDTLLLQENSLY-TIPK-GFFGS 194
>pdb|2Y4I|B Chain B, Ksr2-Mek1 Heterodimer
Length = 319
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/234 (21%), Positives = 91/234 (38%), Gaps = 36/234 (15%)
Query: 303 VFFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSE----KE 358
+F + D F+ ++ E++GKG FG Y + + RL D+ K
Sbjct: 23 IFLQEWDIPFEQLEI----GELIGKGRFGQVYHGRWHGEVAI---RLIDIERDNEDQLKA 75
Query: 359 FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
F+ ++ HEN+V S ++ +L +++ + L+
Sbjct: 76 FKREVMAYRQTRHENVVLFMGACMSPPHLAIITSLCKGRTLYSVVRD----AKIVLDVNK 131
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI 478
+A + + YLH+KG H ++KS N+ + I+DFGL ++ R
Sbjct: 132 TRQIAQEIVKGMGYLHAKGIL--HKDLKSKNVFYDNG-KVVITDFGLFSISGVLQAGRRE 188
Query: 479 DGYR---------APEVT---------DARKVSQKADVYSFGVLLLELLTGKAP 514
D R APE+ D S+ +DV++ G + EL + P
Sbjct: 189 DKLRIQNGWLCHLAPEIIRQLSPDTEEDKLPFSKHSDVFALGTIWYELHAREWP 242
>pdb|3KVW|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2) In Complex
With An Indirubin Ligand
Length = 429
Score = 43.5 bits (101), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 95/207 (45%), Gaps = 32/207 (15%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHE------NLV 375
+V+GKG+FG KA ++ VA+K +++ ++ E++ ++ + + N++
Sbjct: 103 KVIGKGSFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRT-PLNWETRSGL-----ALGASRA 429
+ + R+ + + + M +L L+ N+ G + PL + + AL +R
Sbjct: 163 HMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEA--RISDFG---LAHLASPSSTPNRIDGYRAP 484
I H ++K NILL + + ++ DFG H + +R YRAP
Sbjct: 222 I-----------HCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYTXIQSRF--YRAP 268
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTG 511
EV + D++S G +L ELLTG
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|3E6J|A Chain A, Crystal Structure Of Variable Lymphocyte Receptor (Vlr)
Rbc36 In Complex With H-Trisaccharide
Length = 229
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 55/128 (42%), Gaps = 2/128 (1%)
Query: 57 IAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRL 116
+ G T + L N + P F L NL+ LYL N G+ SL L L
Sbjct: 34 VPAGIPTNAQILYLHDNQITKLEPGVFDSLINLKELYLGSNQLGALPVGVFDSLTQLTVL 93
Query: 117 NLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQFNVSFNKLNGSIPK 176
+L N + SA F++L L L++ N+LT + + L + N+L SIP
Sbjct: 94 DLGTNQLTVLPSAVFDRLVHLKELFMCCNKLTELPRGIERLTHLTHLALDQNQLK-SIPH 152
Query: 177 -RFARLPS 183
F RL S
Sbjct: 153 GAFDRLSS 160
>pdb|2IWI|A Chain A, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
pdb|2IWI|B Chain B, Crystal Structure Of The Human Pim2 In Complex With A
Ruthenium Organometallic Ligand Ru1
Length = 312
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 69/292 (23%), Positives = 116/292 (39%), Gaps = 51/292 (17%)
Query: 307 KGDRAFDLEDLLRASAEVLGKGTFGTAYKAT-----LEMGI-------VVAVKRLKDVTV 354
K AF+ E L +LGKG FGT + L++ I V+ L D
Sbjct: 24 KDREAFEAEYRL---GPLLGKGGFGTVFAGHRLTDRLQVAIKVIPRNRVLGWSPLSDSVT 80
Query: 355 SEKEFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDY-MPMGSLSALLHGNRGAGRTP 413
E +V H ++ L ++ +++ +LV + +P L + G P
Sbjct: 81 CPLEVALLWKVGAGGGHPGVIRLLDWFETQEGFMLVLERPLPAQDLFDYITEKGPLGEGP 140
Query: 414 LNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLS-KSYEARISDFGLAHLA--S 470
+R + AI + HS+G H +IK NIL+ + A++ DFG L
Sbjct: 141 ----SRCFFGQVVA-AIQHCHSRG--VVHRDIKDENILIDLRRGCAKLIDFGSGALLHDE 193
Query: 471 PSSTPNRIDGYRAPE-VTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEEGVDLPRW 529
P + + Y PE ++ + + A V+S G+LL +++ G P
Sbjct: 194 PYTDFDGTRVYSPPEWISRHQYHALPATVWSLGILLYDMVCGDIPF-------------- 239
Query: 530 VQSVVKEEWTAEVFDLELLRYQNVEEEMVQLLQLAINCTAQYPDNRPSMAEV 581
E E+ + EL +V + L++ C A P +RPS+ E+
Sbjct: 240 -------ERDQEILEAELHFPAHVSPDCCALIR---RCLAPKPSSRPSLEEI 281
>pdb|2JAV|A Chain A, Human Kinase With Pyrrole-Indolinone Ligand
pdb|2W5B|A Chain A, Human Nek2 Kinase Atpgammas-bound
pdb|2W5H|A Chain A, Human Nek2 Kinase Apo
Length = 279
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 54/231 (23%), Positives = 101/231 (43%), Gaps = 29/231 (12%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFR---EKMEV 365
RA D E L +G G++G K + G ++ K L +++E E + ++ +
Sbjct: 4 RAEDYEVLY-----TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNL 58
Query: 366 VGSMDHENLVPLRAYYYSR------DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWET 418
+ + H N+V YY R +V +Y G L++++ +G R L+ E
Sbjct: 59 LRELKHPNIVR----YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEF 112
Query: 419 RSGLALGASRAIAYLHSK---GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTP 475
+ + A+ H + G H ++K +N+ L ++ DFGLA + + ++
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDTSF 172
Query: 476 NR----IDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
+ Y +PE + ++K+D++S G LL EL P A +E
Sbjct: 173 AKAFVGTPYYMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|2O6Q|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors A29
Length = 270
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 49/112 (43%), Gaps = 3/112 (2%)
Query: 55 LPIAI-GNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNL 113
LPI + L L + L N L+ P F L+ L L L N G+ L +L
Sbjct: 100 LPIGVFDQLVNLAELRLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQSLPKGVFDKLTSL 159
Query: 114 IRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQFNV 165
L L N F+KLT L TL L NQL +P+ GAF SL + +
Sbjct: 160 KELRLYNNQLKRVPEGAFDKLTELKTLKLDNNQLK-RVPE-GAFDSLEKLKM 209
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 62/134 (46%), Gaps = 15/134 (11%)
Query: 58 AIGNLTELHTVSLRFNALRGTIPSD-FAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRL 116
A LT+L + L N L+ T+P+ F +L NL L++ N G+ L NL L
Sbjct: 56 AFHRLTKLRLLYLNDNKLQ-TLPAGIFKELKNLETLWVTDNKLQALPIGVFDQLVNLAEL 114
Query: 117 NLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAF---SSLAQFNVSFNKLNGS 173
L +N F+ LT+L L L N+L S+P G F +SL + + N+L
Sbjct: 115 RLDRNQLKSLPPRVFDSLTKLTYLSLGYNELQ-SLPK-GVFDKLTSLKELRLYNNQL--- 169
Query: 174 IPKRFARLPSSAFE 187
R+P AF+
Sbjct: 170 -----KRVPEGAFD 178
Score = 32.7 bits (73), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 36/126 (28%), Positives = 57/126 (45%), Gaps = 13/126 (10%)
Query: 60 GNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLA 119
N + S + A+ IP+D KL LQ N S +P F +RL
Sbjct: 16 NNKNSVDCSSKKLTAIPSNIPADTKKLD------LQSNKLSS-LPSKAFHRLTKLRLLYL 68
Query: 120 KNNFSGTISAD-FNKLTRLGTLYLQENQLTGSIPDLGAFS---SLAQFNVSFNKLNGSIP 175
+N T+ A F +L L TL++ +N+L ++P +G F +LA+ + N+L P
Sbjct: 69 NDNKLQTLPAGIFKELKNLETLWVTDNKLQ-ALP-IGVFDQLVNLAELRLDRNQLKSLPP 126
Query: 176 KRFARL 181
+ F L
Sbjct: 127 RVFDSL 132
>pdb|3QD2|B Chain B, Crsytal Structure Of Mouse Perk Kinase Domain
Length = 332
Score = 43.1 bits (100), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/104 (27%), Positives = 46/104 (44%), Gaps = 18/104 (17%)
Query: 422 LALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH----------LASP 471
+ + + A+ +LHSKG H ++K SNI + ++ DFGL + +P
Sbjct: 169 IFIQIAEAVEFLHSKGLM--HRDLKPSNIFFTMDDVVKVGDFGLVTAMDQDEEEQTVLTP 226
Query: 472 SSTPNRIDG------YRAPEVTDARKVSQKADVYSFGVLLLELL 509
G Y +PE S K D++S G++L ELL
Sbjct: 227 MPAYATHXGQVGTKLYMSPEQIHGNNYSHKVDIFSLGLILFELL 270
>pdb|3LM0|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B)
pdb|3LM5|A Chain A, Crystal Structure Of Human SerineTHREONINE KINASE 17B
(STK17B) IN Complex With Quercetin
Length = 327
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/99 (29%), Positives = 48/99 (48%), Gaps = 8/99 (8%)
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSY---EARISDFGLAHLASPSSTPNRIDG---YRA 483
+ YLH H ++K NILLS Y + +I DFG++ + I G Y A
Sbjct: 144 VYYLHQNNIV--HLDLKPQNILLSSIYPLGDIKIVDFGMSRKIGHACELREIMGTPEYLA 201
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
PE+ + ++ D+++ G++ LLT +P N+E
Sbjct: 202 PEILNYDPITTATDMWNIGIIAYMLLTHTSPFVGEDNQE 240
>pdb|2VD5|A Chain A, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
pdb|2VD5|B Chain B, Structure Of Human Myotonic Dystrophy Protein Kinase In
Complex With The Bisindoylmaleide Inhibitor Bim Viii
Length = 412
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 52/221 (23%), Positives = 86/221 (38%), Gaps = 41/221 (18%)
Query: 323 EVLGKGTFG-TAYKATLEMGIVVAVKRLKDVTVSEKE----FREKMEVVGSMDHENLVPL 377
+V+G+G F A + G V A+K + + ++ FRE+ +V+ + D + L
Sbjct: 67 KVIGRGAFSEVAVVKMKQTGQVYAMKIMNKWDMLKRGEVSCFREERDVLVNGDRRWITQL 126
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALL--HGNRGAGRTPLNWETRSGLALGASRAIAYLHS 435
+ + LV +Y G L LL G R + +A+ + + Y+H
Sbjct: 127 HFAFQDENYLYLVMEYYVGGDLLTLLSKFGERIPAEMARFYLAEIVMAIDSVHRLGYVHR 186
Query: 436 KGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG------------YRA 483
+IK NILL + R++DFG S R DG Y +
Sbjct: 187 --------DIKPDNILLDRCGHIRLADFG-------SCLKLRADGTVRSLVAVGTPDYLS 231
Query: 484 PEVTDA-------RKVSQKADVYSFGVLLLELLTGKAPTQA 517
PE+ A + D ++ GV E+ G+ P A
Sbjct: 232 PEILQAVGGGPGTGSYGPECDWWALGVFAYEMFYGQTPFYA 272
>pdb|2W96|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 55/206 (26%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKDV---------TVSEKEFREKMEVVGSMDHENL 374
+G G +GT YKA G VA+K ++ TV E ++E + +H N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE---AFEHPNV 68
Query: 375 VPLR-AYYYSRDEK----LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
V L SR ++ LV +++ L L G L ET L R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG---LPAETIKDLMRQFLRG 124
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRID---GYRAPEV 486
+ +LH+ H ++K NIL++ +++DFGLA + S + + YRAPEV
Sbjct: 125 LDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALDPVVVTLWYRAPEV 182
Query: 487 TDARKVSQKADVYSFGVLLLELLTGK 512
+ D++S G + E+ K
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3G33|A Chain A, Crystal Structure Of Cdk4CYCLIN D3
pdb|3G33|C Chain C, Crystal Structure Of Cdk4CYCLIN D3
Length = 308
Score = 42.7 bits (99), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 58/209 (27%), Positives = 89/209 (42%), Gaps = 30/209 (14%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVK------------RLKDVTVSEKEFREKMEVVGSMDH 371
+G G +GT YKA G VA+K L TV E ++E + +H
Sbjct: 17 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGGGGGGGLPISTVREVALLRRLE---AFEH 73
Query: 372 ENLVPLR-AYYYSRDEK----LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGA 426
N+V L SR ++ LV +++ L L G L ET L
Sbjct: 74 PNVVRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG---LPAETIKDLMRQF 129
Query: 427 SRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS--PSSTPNRID-GYRA 483
R + +LH+ H ++K NIL++ +++DFGLA + S + TP + YRA
Sbjct: 130 LRGLDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALTPVVVTLWYRA 187
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGK 512
PEV + D++S G + E+ K
Sbjct: 188 PEVLLQSTYATPVDMWSVGCIFAEMFRRK 216
>pdb|2GNF|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase With
Y- 27632
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ +G G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +YMP G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1P8T|A Chain A, Crystal Structure Of Nogo-66 Receptor
Length = 285
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 49/111 (44%), Gaps = 2/111 (1%)
Query: 40 RVTMLRFPGMGLSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLF 99
R+ L GL P L L + L+ NAL+ F L NL +L+L GN
Sbjct: 105 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 164
Query: 100 SGEIPGLLF-SLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTG 149
S +P F L +L RL L +N + F L RL TLYL N L+
Sbjct: 165 S-SVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 214
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 40 RVTMLRFPGMGLSGQL------------PIAIGNLTELHTVSLRFNALRGTIPSDFAKLS 87
R+ F G+ L QL P L LHT+ L L+ P F L+
Sbjct: 69 RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLA 128
Query: 88 NLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQL 147
L+ LYLQ N LGNL L L N S F L L L L +N++
Sbjct: 129 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 188
Query: 148 TGSIP----DLGAFSSLAQF 163
P DLG +L F
Sbjct: 189 AHVHPHAFRDLGRLMTLYLF 208
>pdb|2GNG|A Chain A, Protein Kinase A Fivefold Mutant Model Of Rho-Kinase
pdb|2GNH|A Chain A, Pka Five Fold Mutant Model Of Rho-Kinase With H1152p
pdb|2GNI|A Chain A, Pka Fivefold Mutant Model Of Rho-Kinase With Inhibitor
Fasudil (Ha1077)
Length = 350
Score = 42.7 bits (99), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ +G G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +YMP G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYMPGGDMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3O6N|A Chain A, Crystal Structure Of Apl1 Leucine-Rich Repeat Domain
Length = 390
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 49/174 (28%), Positives = 70/174 (40%), Gaps = 19/174 (10%)
Query: 37 TGERVTMLRFPGMGLSGQLPIAIGNLTEL-------------HTVS---LRFNALRGTIP 80
T + TM + P L + + NL +L HT+ + FNA+R P
Sbjct: 51 TFKNSTMRKLPAALLDSFRQVELLNLNDLQIEEIDTYAFAYAHTIQKLYMGFNAIRYLPP 110
Query: 81 SDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTL 140
F + L L L+ N S G+ + L L+++ NN F T L L
Sbjct: 111 HVFQNVPLLTVLVLERNDLSSLPRGIFHNTPKLTTLSMSNNNLERIEDDTFQATTSLQNL 170
Query: 141 YLQENQLTGSIPDLGAFSSLAQFNVSFNKLNG-SIPKRFARLPSSAFEGNSLCG 193
L N+LT DL SL NVS+N L+ +IP L +S N + G
Sbjct: 171 QLSSNRLTHV--DLSLIPSLFHANVSYNLLSTLAIPIAVEELDASHNSINVVRG 222
>pdb|1OZN|A Chain A, 1.5a Crystal Structure Of The Nogo Receptor Ligand Binding
Domain Reveals A Convergent Recognition Scaffold
Mediating Inhibition Of Myelination
Length = 285
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 42/140 (30%), Positives = 52/140 (37%), Gaps = 16/140 (11%)
Query: 40 RVTMLRFPGMGLSGQL------------PIAIGNLTELHTVSLRFNALRGTIPSDFAKLS 87
R+ F G+ L QL P L LHT+ L L+ P F L+
Sbjct: 70 RIDAAAFTGLALLEQLDLSDNAQLRSVDPATFHGLGRLHTLHLDRCGLQELGPGLFRGLA 129
Query: 88 NLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQL 147
L+ LYLQ N LGNL L L N S F L L L L +N++
Sbjct: 130 ALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRISSVPERAFRGLHSLDRLLLHQNRV 189
Query: 148 TGSIP----DLGAFSSLAQF 163
P DLG +L F
Sbjct: 190 AHVHPHAFRDLGRLMTLYLF 209
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 46/110 (41%)
Query: 40 RVTMLRFPGMGLSGQLPIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLF 99
R+ L GL P L L + L+ NAL+ F L NL +L+L GN
Sbjct: 106 RLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNALQALPDDTFRDLGNLTHLFLHGNRI 165
Query: 100 SGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTG 149
S L +L RL L +N + F L RL TLYL N L+
Sbjct: 166 SSVPERAFRGLHSLDRLLLHQNRVAHVHPHAFRDLGRLMTLYLFANNLSA 215
>pdb|1XH9|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V KE + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+++ + +++DFGLA + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLMIDQQGYIKVTDFGLAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|4A4X|A Chain A, Nek2-Ede Bound To Cct248662
Length = 279
Score = 42.4 bits (98), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 56/235 (23%), Positives = 100/235 (42%), Gaps = 37/235 (15%)
Query: 310 RAFDLEDLLRASAEVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFR---EKMEV 365
RA D E L +G G++G K + G ++ K L +++E E + ++ +
Sbjct: 4 RAEDYEVLY-----TIGTGSYGRCQKIRRKSDGKILVWKELDYGSMTEAEKQMLVSEVNL 58
Query: 366 VGSMDHENLVPLRAYYYSR------DEKLLVHDYMPMGSLSALLHGNRGAG-RTPLNWET 418
+ + H N+V YY R +V +Y G L++++ +G R L+ E
Sbjct: 59 LRELKHPNIVR----YYDRIIDRTNTTLYIVMEYCEGGDLASVI--TKGTKERQYLDEEF 112
Query: 419 RSGLALGASRAIAYLHSK---GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-- 473
+ + A+ H + G H ++K +N+ L ++ DFGLA + +
Sbjct: 113 VLRVMTQLTLALKECHRRSDGGHTVLHRDLKPANVFLDGKQNVKLGDFGLARILNHDEDF 172
Query: 474 ------TPNRIDGYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAPTQALLNEE 522
TP Y +PE + ++K+D++S G LL EL P A +E
Sbjct: 173 AKEFVGTPY----YMSPEQMNRMSYNEKSDIWSLGCLLYELCALMPPFTAFSQKE 223
>pdb|3K2L|A Chain A, Crystal Structure Of Dual-Specificity Tyrosine
Phosphorylation Regulated Kinase 2 (Dyrk2)
Length = 429
Score = 42.4 bits (98), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 51/207 (24%), Positives = 93/207 (44%), Gaps = 32/207 (15%)
Query: 323 EVLGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHE------NLV 375
+V+GKG FG KA ++ VA+K +++ ++ E++ ++ + + N++
Sbjct: 103 KVIGKGXFGQVVKAYDHKVHQHVALKMVRNEKRFHRQAAEEIRILEHLRKQDKDNTMNVI 162
Query: 376 PLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRT-PLNWETRSGL-----ALGASRA 429
+ + R+ + + + M +L L+ N+ G + PL + + AL +R
Sbjct: 163 HMLENFTFRNHICMTFELLSM-NLYELIKKNKFQGFSLPLVRKFAHSILQCLDALHKNRI 221
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEA--RISDFG---LAHLASPSSTPNRIDGYRAP 484
I H ++K NILL + + ++ DFG H +R YRAP
Sbjct: 222 I-----------HCDLKPENILLKQQGRSGIKVIDFGSSCYEHQRVYXXIQSRF--YRAP 268
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTG 511
EV + D++S G +L ELLTG
Sbjct: 269 EVILGARYGMPIDMWSLGCILAELLTG 295
>pdb|4AZE|A Chain A, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|B Chain B, Human Dyrk1a In Complex With Leucettine L41
pdb|4AZE|C Chain C, Human Dyrk1a In Complex With Leucettine L41
Length = 382
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 324 VLGKGTFG---TAYKATLEMGIVVAVKRLKDVTVSEKEFREKM-EVVGSMDHE---NLVP 376
++GKG+FG AY + + + + + K +++ + ++ E++ D E +V
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGN-RGAGRTPLNWETRSGLALGASRAIAYLHS 435
L+ ++ R+ LV + + L + N RG LN + A A+ +L +
Sbjct: 121 LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS---LNLTRK--FAQQMCTALLFLAT 175
Query: 436 KGPANSHGNIKSSNILLS--KSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVTDARKV 492
+ H ++K NILL K +I DFG + L + YR+PEV
Sbjct: 176 PELSIIHCDLKPENILLCNPKRXAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 493 SQKADVYSFGVLLLELLTGK 512
D++S G +L+E+ TG+
Sbjct: 236 DLAIDMWSLGCILVEMHTGE 255
>pdb|2H34|A Chain A, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
pdb|2H34|B Chain B, Apoenzyme Crystal Structure Of The Tuberculosis
SerineTHREONINE Kinase, Pkne
Length = 309
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 48/192 (25%), Positives = 78/192 (40%), Gaps = 34/192 (17%)
Query: 343 VVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGS 398
+VA+K + S+ FR + + G + ++VP +HD+ G
Sbjct: 61 IVALKLXSETLSSDPVFRTRXQREARTAGRLQEPHVVP-------------IHDF---GE 104
Query: 399 LSALLHGN-RGAGRTPLNWETRSGLALGASRAIAYLHSKGPAN--------SHGNIKSSN 449
+ L+ + R L R L RA+A + G A +H ++K N
Sbjct: 105 IDGQLYVDXRLINGVDLAAXLRRQGPLAPPRAVAIVRQIGSALDAAHAAGATHRDVKPEN 164
Query: 450 ILLSKSYEARISDFGLAHLASP---SSTPNRIDG--YRAPEVTDARKVSQKADVYSFGVL 504
IL+S A + DFG+A + + N + Y APE + +AD+Y+ +
Sbjct: 165 ILVSADDFAYLVDFGIASATTDEKLTQLGNTVGTLYYXAPERFSESHATYRADIYALTCV 224
Query: 505 LLELLTGKAPTQ 516
L E LTG P Q
Sbjct: 225 LYECLTGSPPYQ 236
>pdb|2W9F|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 88/206 (42%), Gaps = 27/206 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKDV---------TVSEKEFREKMEVVGSMDHENL 374
+G G +GT YKA G VA+K ++ TV E ++E + +H N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE---AFEHPNV 68
Query: 375 VPLR-AYYYSRDEK----LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
V L SR ++ LV +++ L L G L ET L R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG---LPAETIKDLMRQFLRG 124
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSST--PNRID-GYRAPEV 486
+ +LH+ H ++K NIL++ +++DFGLA + S P + YRAPEV
Sbjct: 125 LDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALFPVVVTLWYRAPEV 182
Query: 487 TDARKVSQKADVYSFGVLLLELLTGK 512
+ D++S G + E+ K
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|1SMH|A Chain A, Protein Kinase A Variant Complex With Completely Ordered
N- Terminal Helix
pdb|1XHA|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 50/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V KE + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKEIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+++ + +++DFGLA + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLMIDQQGYIQVTDFGLAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3G3B|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
pdb|3G3B|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor Mutant
In Complex With A Protein Antigen
Length = 170
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 92 LYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSI 151
LYL N + PG+ L L RL+L N + + F+KLT+L L L +NQL SI
Sbjct: 35 LYLYDNRITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQLK-SI 93
Query: 152 PDLGAFSSL 160
P GAF +L
Sbjct: 94 PR-GAFDNL 101
>pdb|2W99|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
pdb|2W9Z|B Chain B, Crystal Structure Of Cdk4 In Complex With A D-Type Cyclin
Length = 306
Score = 42.0 bits (97), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 56/206 (27%), Positives = 89/206 (43%), Gaps = 27/206 (13%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKDV---------TVSEKEFREKMEVVGSMDHENL 374
+G G +GT YKA G VA+K ++ TV E ++E + +H N+
Sbjct: 12 IGVGAYGTVYKARDPHSGHFVALKSVRVPNGEEGLPISTVREVALLRRLE---AFEHPNV 68
Query: 375 VPLR-AYYYSRDEK----LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
V L SR ++ LV +++ L L G L ET L R
Sbjct: 69 VRLMDVCATSRTDREIKVTLVFEHVDQ-DLRTYLDKAPPPG---LPAETIKDLMRQFLRG 124
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS--PSSTPNRID-GYRAPEV 486
+ +LH+ H ++K NIL++ +++DFGLA + S + P + YRAPEV
Sbjct: 125 LDFLHAN--CIVHRDLKPENILVTSGGTVKLADFGLARIYSYQMALAPVVVTLWYRAPEV 182
Query: 487 TDARKVSQKADVYSFGVLLLELLTGK 512
+ D++S G + E+ K
Sbjct: 183 LLQSTYATPVDMWSVGCIFAEMFRRK 208
>pdb|3TWI|D Chain D, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|E Chain E, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
pdb|3TWI|F Chain F, Variable Lymphocyte Receptor Recognition Of The
Immunodominant Glycoprotein Of Bacillus Anthracis Spores
Length = 179
Score = 42.0 bits (97), Expect = 0.001, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 44/84 (52%), Gaps = 4/84 (4%)
Query: 77 GTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTR 136
++P+ + + +LY+ N + PG+ SL L LNLA N + F+KLT+
Sbjct: 32 ASVPAGIPTTTQVLHLYI--NQITKLEPGVFDSLTQLTYLNLAVNQLTALPVGVFDKLTK 89
Query: 137 LGTLYLQENQLTGSIPDLGAFSSL 160
L L L NQL SIP +G F +L
Sbjct: 90 LTHLALHINQLK-SIP-MGVFDNL 111
>pdb|2O6R|A Chain A, Structural Diversity Of The Hagfish Variable Lymphocyte
Receptors B61
Length = 177
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 47/101 (46%), Gaps = 8/101 (7%)
Query: 63 TELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNN 122
TE+ S ++ IPS +L L+ N G+ L L +L+L++N
Sbjct: 10 TEIRCNSKGLTSVPTGIPSSATRLE------LESNKLQSLPHGVFDKLTQLTKLSLSQNQ 63
Query: 123 FSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSLAQF 163
F+KLT+L LYL EN+L S+P+ G F L Q
Sbjct: 64 IQSLPDGVFDKLTKLTILYLHENKLQ-SLPN-GVFDKLTQL 102
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 29/97 (29%), Positives = 40/97 (41%)
Query: 62 LTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKN 121
LT+L +SL N ++ F KL+ L LYL N G+ L L L L N
Sbjct: 51 LTQLTKLSLSQNQIQSLPDGVFDKLTKLTILYLHENKLQSLPNGVFDKLTQLKELALDTN 110
Query: 122 NFSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFS 158
F++LT L ++L N S P + S
Sbjct: 111 QLKSVPDGIFDRLTSLQKIWLHTNPWDCSCPRIDYLS 147
>pdb|2VX3|A Chain A, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|B Chain B, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|C Chain C, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2VX3|D Chain D, Crystal Structure Of The Human Dual Specificity Tyrosine-
Phosphorylation-Regulated Kinase 1a
pdb|2WO6|A Chain A, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
pdb|2WO6|B Chain B, Human Dual-Specificity Tyrosine-Phosphorylation-Regulated
Kinase 1a In Complex With A Consensus Substrate Peptide
Length = 382
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 324 VLGKGTFG---TAYKATLEMGIVVAVKRLKDVTVSEKEFREKM-EVVGSMDHE---NLVP 376
++GKG+FG AY + + + + + K +++ + ++ E++ D E +V
Sbjct: 61 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 120
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGN-RGAGRTPLNWETRSGLALGASRAIAYLHS 435
L+ ++ R+ LV + + L + N RG LN + A A+ +L +
Sbjct: 121 LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS---LNLTRK--FAQQMCTALLFLAT 175
Query: 436 KGPANSHGNIKSSNILLS--KSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVTDARKV 492
+ H ++K NILL K +I DFG + L + YR+PEV
Sbjct: 176 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 235
Query: 493 SQKADVYSFGVLLLELLTGK 512
D++S G +L+E+ TG+
Sbjct: 236 DLAIDMWSLGCILVEMHTGE 255
>pdb|4BCF|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKE------FREKMEVVGSMDHENLVPL 377
+G+GTFG +KA + G VA+K++ + +EKE RE ++++ + HEN+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALRE-IKILQLLKHENVVNL 82
Query: 378 ------RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+A Y+R + LV D+ L+ LL N T + + L
Sbjct: 83 IEICRTKASPYNRCKASIYLVFDFCE-HDLAGLL-SNVLVKFTLSEIKRVMQMLLNG--- 137
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS--PSSTPNRIDG------Y 481
+ Y+H H ++K++N+L+++ +++DFGLA S +S PNR Y
Sbjct: 138 LYYIHRNKIL--HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 482 RAPE-VTDARKVSQKADVYSFGVLLLELLT 510
R PE + R D++ G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3ANQ|A Chain A, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|B Chain B, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|C Chain C, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANQ|D Chain D, Human Dyrk1aINHIBITOR COMPLEX
pdb|3ANR|A Chain A, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|B Chain B, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|C Chain C, Human Dyrk1aHARMINE COMPLEX
pdb|3ANR|D Chain D, Human Dyrk1aHARMINE COMPLEX
Length = 368
Score = 41.6 bits (96), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 90/200 (45%), Gaps = 16/200 (8%)
Query: 324 VLGKGTFG---TAYKATLEMGIVVAVKRLKDVTVSEKEFREKM-EVVGSMDHE---NLVP 376
++GKG+FG AY + + + + + K +++ + ++ E++ D E +V
Sbjct: 42 LIGKGSFGQVVKAYDRVEQEWVAIKIIKNKKAFLNQAQIEVRLLELMNKHDTEMKYYIVH 101
Query: 377 LRAYYYSRDEKLLVHDYMPMGSLSALLHGN-RGAGRTPLNWETRSGLALGASRAIAYLHS 435
L+ ++ R+ LV + + L + N RG LN + A A+ +L +
Sbjct: 102 LKRHFMFRNHLCLVFEMLSYNLYDLLRNTNFRGVS---LNLTRK--FAQQMCTALLFLAT 156
Query: 436 KGPANSHGNIKSSNILLS--KSYEARISDFGLA-HLASPSSTPNRIDGYRAPEVTDARKV 492
+ H ++K NILL K +I DFG + L + YR+PEV
Sbjct: 157 PELSIIHCDLKPENILLCNPKRSAIKIVDFGSSCQLGQRIYQXIQSRFYRSPEVLLGMPY 216
Query: 493 SQKADVYSFGVLLLELLTGK 512
D++S G +L+E+ TG+
Sbjct: 217 DLAIDMWSLGCILVEMHTGE 236
>pdb|2UZT|A Chain A, Pka Structures Of Akt, Indazole-Pyridine Inhibitors
pdb|2UZU|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
pdb|2UZV|A Chain A, Pka Structures Of Indazole-pyridine Series Of Akt
Inhibitors
pdb|2UZW|E Chain E, Pka Structures Of Indazole-Pyridine Series Of Akt
Inhibitors
Length = 336
Score = 41.2 bits (95), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 33 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 92
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+P G + + L R GR + A YLHS
Sbjct: 93 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 147
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 148 LI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----YLAPEIILSKGY 201
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 202 NKAVDWWALGVLIYEMAAGYPP 223
>pdb|2C1A|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
Isoquinoline-5-Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl)amide
pdb|2C1B|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
(4r,2s)-5'-(4-(4-Chlorobenzyloxy)pyrrolidin-2-
Ylmethanesulfonyl)isoquinoline
pdb|2VO7|A Chain A, Structure Of Pka Complexed With 4-(4-Chlorobenzyl)-1-(7h-
Pyrrolo(2,3-D)pyrimidin-4-Yl)piperidin-4-Ylamine
pdb|3AG9|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
pdb|3AG9|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1012
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+P G + + L R GR + A YLHS
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 162
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 163 LI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 216
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|1SVH|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 8
pdb|1XH5|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH6|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|1XH8|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|2GFC|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3DND|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
pdb|3DNE|A Chain A, Camp-Dependent Protein Kinase Pka Catalytic Subunit With
Pki-5-24
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1STC|E Chain E, Camp-Dependent Protein Kinase, Alpha-Catalytic Subunit In
Complex With Staurosporine
pdb|1Q8T|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase
(Pka) In Complex With Rho-Kinase Inhibitor Y-27632
pdb|1Q8U|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor H-1152p
pdb|1SVE|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 1
pdb|1SVG|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 4
pdb|1VEB|A Chain A, Crystal Structure Of Protein Kinase A In Complex With
Azepane Derivative 5
pdb|3E8C|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|C Chain C, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|D Chain D, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8C|F Chain F, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp- Competitive Inhibitors
pdb|3E8E|A Chain A, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|B Chain B, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|E Chain E, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|I Chain I, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|L Chain L, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
pdb|3E8E|P Chain P, Crystal Structures Of The Kinase Domain Of Pka In Complex
With Atp-Competitive Inhibitors
Length = 350
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|2F7E|E Chain E, Pka Complexed With
(S)-2-(1h-Indol-3-Yl)-1-(5-Isoquinolin-6-
Yl-Pyridin-3-Yloxymethyl-Etylamine
pdb|2F7X|E Chain E, Protein Kinase A Bound To
(s)-2-(1h-indol-3-yl)-1-[5-((e)-2-
Pyridin-4-yl-vinyl)-pyridin-3-yloxymethyl]-ethylamine
pdb|2F7Z|E Chain E, Protein Kinase A Bound To
(R)-1-(1h-Indol-3-Ylmethyl)-2-(2-
Pyridin-4-Yl-[1,7]naphtyridin-5-Yloxy)-Ehylamine
pdb|2OH0|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
pdb|2OJF|E Chain E, Crystal Structure Of Protein Kinase A In Complex With
Pyridine-Pyrazolopyridine Based Inhibitors
Length = 351
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/202 (24%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+P G + + L R GR + A YLHS
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 162
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 163 LI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWTLCGTPE----YLAPEIILSKGY 216
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|3SDJ|A Chain A, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|B Chain B, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|C Chain C, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|D Chain D, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|E Chain E, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|F Chain F, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|G Chain G, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|H Chain H, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|I Chain I, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|J Chain J, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|K Chain K, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|L Chain L, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|M Chain M, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
pdb|3SDJ|N Chain N, Structure Of Rnase-Inactive Point Mutant Of Oligomeric
KinaseRNASE Ire1
Length = 448
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 318 LRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPL 377
L S ++LG G+ GT G VAVKR+ + + E + S DH N++
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVI-- 90
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSAL-LHGNRGAGRTPLNWETRS---GLALGASRAIAYL 433
YY S ++ + + +L+ L ++ L + L + +A+L
Sbjct: 91 -RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 434 HSKGPANSHGNIKSSNILLSKS-------------YEARISDFGLA------------HL 468
HS H ++K NIL+S S ISDFGL +L
Sbjct: 150 HSLKII--HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 469 ASPSSTPNRIDGYRAPEVTD---ARKVSQKADVYSFGVLLLELLT-GKAP 514
+PS T G+RAPE+ + R++++ D++S G + +L+ GK P
Sbjct: 208 NNPSGT----SGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|4EC8|A Chain A, Structure Of Full Length Cdk9 In Complex With Cyclint And
Drb
pdb|4EC9|A Chain A, Crystal Structure Of Full-Length Cdk9 In Complex With
Cyclin T
Length = 373
Score = 41.2 bits (95), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKE------FREKMEVVGSMDHENLVPL 377
+G+GTFG +KA + G VA+K++ + +EKE RE ++++ + HEN+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALRE-IKILQLLKHENVVNL 82
Query: 378 ------RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+A Y+R + LV D+ L+ LL N T + + L
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLL-SNVLVKFTLSEIKRVMQMLLNG--- 137
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS--PSSTPNRIDG------Y 481
+ Y+H H ++K++N+L+++ +++DFGLA S +S PNR Y
Sbjct: 138 LYYIHRNKIL--HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 482 RAPE-VTDARKVSQKADVYSFGVLLLELLT 510
R PE + R D++ G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3BLH|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1
pdb|3BLQ|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
ATP
pdb|3BLR|A Chain A, Crystal Structure Of Human Cdk9CYCLINT1 IN COMPLEX WITH
Flavopiridol
pdb|3MY1|A Chain A, Structure Of Cdk9CYCLINT1 IN COMPLEX WITH DRB
pdb|3LQ5|A Chain A, Structure Of Cdk9CYCLINT IN COMPLEX WITH S-Cr8
pdb|3TN8|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNH|A Chain A, Cdk9CYCLIN T IN COMPLEX WITH CAN508
pdb|3TNI|A Chain A, Structure Of Cdk9CYCLIN T F241L
pdb|4BCH|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCI|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
pdb|4BCJ|A Chain A, Structure Of Cdk9 In Complex With Cyclin T And A
2-amino-4- Heteroaryl-pyrimidine Inhibitor
Length = 331
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKE------FREKMEVVGSMDHENLVPL 377
+G+GTFG +KA + G VA+K++ + +EKE RE ++++ + HEN+V L
Sbjct: 26 IGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALRE-IKILQLLKHENVVNL 82
Query: 378 ------RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+A Y+R + LV D+ L+ LL N T + + L
Sbjct: 83 IEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLL-SNVLVKFTLSEIKRVMQMLLNG--- 137
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS--PSSTPNRIDG------Y 481
+ Y+H H ++K++N+L+++ +++DFGLA S +S PNR Y
Sbjct: 138 LYYIHRNKIL--HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 195
Query: 482 RAPE-VTDARKVSQKADVYSFGVLLLELLT 510
R PE + R D++ G ++ E+ T
Sbjct: 196 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 225
>pdb|3FBV|A Chain A, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|B Chain B, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|C Chain C, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|D Chain D, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|E Chain E, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|F Chain F, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|G Chain G, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|H Chain H, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|I Chain I, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|J Chain J, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|K Chain K, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|L Chain L, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|M Chain M, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3FBV|N Chain N, Crystal Structure Of The Oligomer Formed By The
Kinase-Ribonuclease Domain Of Ire1
pdb|3SDM|A Chain A, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|B Chain B, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|C Chain C, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|D Chain D, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|E Chain E, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|F Chain F, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
pdb|3SDM|G Chain G, Structure Of Oligomeric KinaseRNASE IRE1 IN COMPLEX WITH
AN Oligonucleotide
Length = 448
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 43/230 (18%)
Query: 318 LRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPL 377
L S ++LG G+ GT G VAVKR+ + + E + S DH N++
Sbjct: 34 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVI-- 90
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSAL-LHGNRGAGRTPLNWETRS---GLALGASRAIAYL 433
YY S ++ + + +L+ L ++ L + L + +A+L
Sbjct: 91 -RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 149
Query: 434 HSKGPANSHGNIKSSNILLSKS-------------YEARISDFGLA------------HL 468
HS H ++K NIL+S S ISDFGL +L
Sbjct: 150 HSLKII--HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 207
Query: 469 ASPSSTPNRIDGYRAPEVTD---ARKVSQKADVYSFGVLLLELLT-GKAP 514
+PS T G+RAPE+ + R++++ D++S G + +L+ GK P
Sbjct: 208 NNPSGT----SGWRAPELLEESTKRRLTRSIDIFSMGCVFYYILSKGKHP 253
>pdb|3G3A|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|C Chain C, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|E Chain E, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
pdb|3G3A|G Chain G, Structure Of A Lamprey Variable Lymphocyte Receptor In
Complex With A Protein Antigen
Length = 178
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 92 LYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSI 151
LYL N + PG+ L L RL+L N + + F+KLT+L L L +NQL SI
Sbjct: 43 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-KSI 101
Query: 152 PDLGAFSSL 160
P GAF +L
Sbjct: 102 PR-GAFDNL 109
>pdb|2JDS|A Chain A, Structure Of Camp-Dependent Protein Kinase Complexed With
A- 443654
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 107
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRAIAYLHSK 436
+ +V +Y+P G + + L R GR E + A YLHS
Sbjct: 108 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX---EPHARFYAAQIVLTFEYLHSL 161
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARK 491
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 DLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKG 215
Query: 492 VSQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|1Q8W|A Chain A, The Catalytic Subunit Of Camp-Dependent Protein Kinase In
Complex With Rho-Kinase Inhibitor Fasudil (Ha-1077)
pdb|1XH4|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
pdb|3BWJ|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Lead Compound Arc-1034
pdb|3KKV|A Chain A, Structure Of Pka With A Protein Kinase B-Selective
Inhibitor
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRAIAYLHSK 436
+ +V +Y+P G + + L R GR E + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX---EPHARFYAAQIVLTFEYLHSL 160
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARK 491
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 161 DLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKG 214
Query: 492 VSQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CMK|E Chain E, Crystal Structures Of The Myristylated Catalytic Subunit
Of Camp- Dependent Protein Kinase Reveal Open And Closed
Conformations
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 154
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 155 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CTP|E Chain E, Structure Of The Mammalian Catalytic Subunit Of
Camp-Dependent Protein Kinase And An Inhibitor Peptide
Displays An Open Conformation
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 154
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 155 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1CDK|A Chain A, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
pdb|1CDK|B Chain B, Camp-Dependent Protein Kinase Catalytic Subunit
(E.C.2.7.1.37) (Protein Kinase A) Complexed With Protein
Kinase Inhibitor Peptide Fragment 5-24 (Pki(5-24)
Isoelectric Variant Ca) And Mn2+ Adenylyl
Imidodiphosphate (Mnamp-Pnp) At Ph 5.6 And 7c And 4c
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 47 KTLGTGSFGRVMLVKHKETGNHFAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 99
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 100 FPFLVKLEYSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 154
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 155 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 208
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 209 IILSKGYNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1XH7|A Chain A, Crystal Structures Of Protein Kinase B Selective
Inhibitors In Complex With Protein Kinase A And Mutants
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/203 (24%), Positives = 87/203 (42%), Gaps = 23/203 (11%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRAIAYLHSK 436
+ +V +Y+P G + + L R GR E + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX---EPHARFYAAQIVLTFEYLHSL 160
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARK 491
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 161 DLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKG 214
Query: 492 VSQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|2GNJ|A Chain A, Pka Three Fold Mutant Model Of Rho-Kinase With Y-27632
pdb|2GNL|A Chain A, Pka Threefold Mutant Model Of Rho-Kinase With Inhibitor H-
1152p
Length = 350
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 86/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ +G G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTIGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|3UIB|A Chain A, Map Kinase Lmampk10 From Leishmania Major In Complex With
Sb203580
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 28/210 (13%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKR-------------LKDVTVSEKEFREKMEVVGSMDH 371
+ G++G GI VA+KR L D + ++ RE + ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE-IRLLNHFHH 88
Query: 372 ENLVPLRAYYYSRDE----KLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS 427
N++ LR + +E KL + + L+ ++H R + LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI---DGYRAP 484
+ LH G H ++ NILL+ + + I DF LA + + YRAP
Sbjct: 147 --LHVLHEAGVV--HRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 485 E-VTDARKVSQKADVYSFGVLLLELLTGKA 513
E V + ++ D++S G ++ E+ KA
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3PG1|A Chain A, Map Kinase Lmampk10 From Leishmania Major (1.95 Angs
Resolution)
Length = 362
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 49/210 (23%), Positives = 85/210 (40%), Gaps = 28/210 (13%)
Query: 325 LGKGTFGTAYKATLEMGIVVAVKR-------------LKDVTVSEKEFREKMEVVGSMDH 371
+ G++G GI VA+KR L D + ++ RE + ++ H
Sbjct: 30 ISSGSYGAVCAGVDSEGIPVAIKRVFNTVSDGRTVNILSDSFLCKRVLRE-IRLLNHFHH 88
Query: 372 ENLVPLRAYYYSRDE----KLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGAS 427
N++ LR + +E KL + + L+ ++H R + LG
Sbjct: 89 PNILGLRDIFVHFEEPAMHKLYLVTELMRTDLAQVIHDQRIVISPQHIQYFMYHILLG-- 146
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI---DGYRAP 484
+ LH G H ++ NILL+ + + I DF LA + + YRAP
Sbjct: 147 --LHVLHEAGVV--HRDLHPGNILLADNNDITICDFNLAREDTADANKTHYVTHRWYRAP 202
Query: 485 E-VTDARKVSQKADVYSFGVLLLELLTGKA 513
E V + ++ D++S G ++ E+ KA
Sbjct: 203 ELVMQFKGFTKLVDMWSAGCVMAEMFNRKA 232
>pdb|3G39|A Chain A, Structure Of A Lamprey Variable Lymphocyte Receptor
Length = 170
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/69 (42%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 92 LYLQGNLFSGEIPGLLFSLGNLIRLNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSI 151
LYL N + PG+ L L RL+L N + + F+KLT+L L L +NQL SI
Sbjct: 35 LYLYDNQITKLEPGVFDRLTQLTRLDLDNNQLTVLPAGVFDKLTQLTQLSLNDNQL-KSI 93
Query: 152 PDLGAFSSL 160
P GAF +L
Sbjct: 94 PR-GAFDNL 101
>pdb|3MI9|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Human P-Tefb
pdb|3MIA|A Chain A, Crystal Structure Of Hiv-1 Tat Complexed With Atp-Bound
Human P-Tefb
Length = 351
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 58/210 (27%), Positives = 100/210 (47%), Gaps = 34/210 (16%)
Query: 325 LGKGTFGTAYKAT-LEMGIVVAVKRLKDVTVSEKE------FREKMEVVGSMDHENLVPL 377
+G+GTFG +KA + G VA+K++ + +EKE RE ++++ + HEN+V L
Sbjct: 25 IGQGTFGEVFKARHRKTGQKVALKKV--LMENEKEGFPITALRE-IKILQLLKHENVVNL 81
Query: 378 ------RAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRA 429
+A Y+R + LV D+ L+ LL N T + + L
Sbjct: 82 IEICRTKASPYNRCKGSIYLVFDFCE-HDLAGLL-SNVLVKFTLSEIKRVMQMLLNG--- 136
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLAS--PSSTPNRIDG------Y 481
+ Y+H H ++K++N+L+++ +++DFGLA S +S PNR Y
Sbjct: 137 LYYIHRNKIL--HRDMKAANVLITRDGVLKLADFGLARAFSLAKNSQPNRYXNRVVTLWY 194
Query: 482 RAPE-VTDARKVSQKADVYSFGVLLLELLT 510
R PE + R D++ G ++ E+ T
Sbjct: 195 RPPELLLGERDYGPPIDLWGAGCIMAEMWT 224
>pdb|4AE6|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
pdb|4AE6|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit Calpha 2
Length = 343
Score = 40.8 bits (94), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 92
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 147
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 148 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 201
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 202 IILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|4F99|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9A|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Nucleotide
pdb|4F9B|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9B|C Chain C, Human Cdc7 Kinase In Complex With Dbf4 And Pha767491
pdb|4F9C|A Chain A, Human Cdc7 Kinase In Complex With Dbf4 And Xl413
Length = 361
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 57/255 (22%), Positives = 101/255 (39%), Gaps = 69/255 (27%)
Query: 313 DLEDLLRASAEV---------LGKGTFGTAYKATLEMGIVVAVK-RLKDVTVSEKEFR-- 360
D+E L A ++ +G+GTF + Y AT ++ + K LK + + R
Sbjct: 8 DIEKLYEAVPQLSNVFKIEDKIGEGTFSSVYLATAQLQVGPEEKIALKHLIPTSHPIRIA 67
Query: 361 ---EKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWE 417
+ + V G D N++ ++ + D ++ Y+ S +L+ L+++
Sbjct: 68 AELQCLTVAGGQD--NVMGVKYCFRKNDHVVIAMPYLEHESFLDILNS--------LSFQ 117
Query: 418 TRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEAR-ISDFGLA---------- 466
L +A+ +H G H ++K SN L ++ + + DFGLA
Sbjct: 118 EVREYMLNLFKALKRIHQFGIV--HRDVKPSNFLYNRRLKKYALVDFGLAQGTHDTKIEL 175
Query: 467 --------------------------HLASPSSTPNRIDGYRAPEV-TDARKVSQKADVY 499
+A + TP G+RAPEV T + D++
Sbjct: 176 LKFVQSEAQQERCSQNKCSICLSRRQQVAPRAGTP----GFRAPEVLTKCPNQTTAIDMW 231
Query: 500 SFGVLLLELLTGKAP 514
S GV+ L LL+G+ P
Sbjct: 232 SAGVIFLSLLSGRYP 246
>pdb|3NX8|A Chain A, Human Camp Dependent Protein Kinase In Complex With Phenol
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 100
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 155
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 156 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3AGL|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3AGL|B Chain B, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-1039
pdb|3VQH|A Chain A, Bromine Sad Partially Resolves Multiple Binding Modes For
Pka Inhibitor H-89
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 100
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 155
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 156 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2ZV2|A Chain A, Crystal Structure Of Human CalciumCALMODULIN-Dependent
Protein Kinase Kinase 2, Beta, Camkk2 Kinase Domain In
Complex With Sto-609
Length = 298
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 32/98 (32%), Positives = 54/98 (55%), Gaps = 17/98 (17%)
Query: 428 RAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAH--------LASPSSTPNRID 479
+ I YLH + H +IK SN+L+ + +I+DFG+++ L++ TP
Sbjct: 148 KGIEYLHYQKII--HRDIKPSNLLVGEDGHIKIADFGVSNEFKGSDALLSNTVGTP---- 201
Query: 480 GYRAPE-VTDARKV-SQKA-DVYSFGVLLLELLTGKAP 514
+ APE +++ RK+ S KA DV++ GV L + G+ P
Sbjct: 202 AFMAPESLSETRKIFSGKALDVWAMGVTLYCFVFGQCP 239
>pdb|3SOA|A Chain A, Full-Length Human Camkii
Length = 444
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 82/211 (38%), Gaps = 34/211 (16%)
Query: 323 EVLGKGTFGTAYKATLEMG------IVVAVKRL--KDVTVSEKEFREKMEVVGSMDHENL 374
E LGKG F + + +++ K+L +D E+E R + + H N+
Sbjct: 17 EELGKGAFSVVRRCVKVLAGQEYAAMIINTKKLSARDHQKLEREAR----ICRLLKHPNI 72
Query: 375 VPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLH 434
V L L+ D + G L + R + S A+ + H
Sbjct: 73 VRLHDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCH 127
Query: 435 SKGPANSHGNIKSSNILLS---KSYEARISDFGLA--------HLASPSSTPNRIDGYRA 483
G H N+K N+LL+ K +++DFGLA + TP GY +
Sbjct: 128 QMGVV--HRNLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP----GYLS 181
Query: 484 PEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
PEV + D+++ GV+L LL G P
Sbjct: 182 PEVLRKDPYGKPVDLWACGVILYILLVGYPP 212
>pdb|3QC9|A Chain A, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|B Chain B, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|C Chain C, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
pdb|3QC9|D Chain D, Crystal Structure Of Cross-Linked Bovine Grk1 T8cN480C
DOUBLE MUTANT Complexed With Adp And Mg
Length = 543
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR----IDGYRAPEVTDARKVSQKAD 497
+ ++K N+LL RISD GLA T + G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 498 VYSFGVLLLELLTGKAPTQA 517
++ GV L E++ + P +A
Sbjct: 372 YFALGVTLYEMIAARGPFRA 391
>pdb|3AGM|A Chain A, Complex Of Pka With The Bisubstrate Protein Kinase
Inhibitor Arc-670
pdb|3L9L|A Chain A, Crystal Structure Of Pka With Compound 36
pdb|3L9L|B Chain B, Crystal Structure Of Pka With Compound 36
pdb|3OOG|A Chain A, Human Camp-Dependent Protein Kinase In Complex With A
Small Fragment
pdb|3OVV|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OWP|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3OXT|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3P0M|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
pdb|3POO|A Chain A, Human Camp-Dependent Protein Kinase In Complex With An
Inhibitor
Length = 351
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 100
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 155
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 156 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3C4X|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4X|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.9a
pdb|3C4Y|A Chain A, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Y|B Chain B, Crystal Structure Of Apo Form Of G Protein Coupled
Receptor Kinase 1 At 7.51a
pdb|3C4Z|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 1.84a
pdb|3C50|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C50|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 2.6a
pdb|3C51|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
pdb|3C51|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Adp And Magnesium Chloride At 3.55a
Length = 543
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR----IDGYRAPEVTDARKVSQKAD 497
+ ++K N+LL RISD GLA T + G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 498 VYSFGVLLLELLTGKAPTQA 517
++ GV L E++ + P +A
Sbjct: 372 YFALGVTLYEMIAARGPFRA 391
>pdb|2RIO|A Chain A, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
pdb|2RIO|B Chain B, Structure Of The Dual Enzyme Ire1 Reveals The Basis For
Catalysis And Regulation Of Non-conventional Splicing
Length = 434
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/230 (25%), Positives = 97/230 (42%), Gaps = 39/230 (16%)
Query: 318 LRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPL 377
L S ++LG G+ GT G VAVKR+ + + E + S DH N++
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVI-- 72
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSAL-LHGNRGAGRTPLNWETRSG---LALGASRAIAYL 433
YY S ++ + + +L+ L ++ L + L + +A+L
Sbjct: 73 -RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 434 HSKGPANSHGNIKSSNILLSKS-------------YEARISDFGLAH-LASPSST----- 474
HS H ++K NIL+S S ISDFGL L S S+
Sbjct: 132 HSLKII--HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQSSFRTNL 189
Query: 475 --PNRIDGYRAPEVTD-------ARKVSQKADVYSFGVLLLELLT-GKAP 514
P+ G+RAPE+ + R++++ D++S G + +L+ GK P
Sbjct: 190 NNPSGTSGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|4AE9|A Chain A, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
pdb|4AE9|B Chain B, Structure And Function Of The Human Sperm-specific Isoform
Of Protein Kinase A (pka) Catalytic Subunit C Alpha 2
Length = 343
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 51/210 (24%), Positives = 92/210 (43%), Gaps = 37/210 (17%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 40 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 92
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRA 429
LV L + +V +Y+P G + + L R GR E + A
Sbjct: 93 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGRFX---EPHARFYAAQIVLT 146
Query: 430 IAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAP 484
YLHS + ++K N+L+ + +++DFG A + TP Y AP
Sbjct: 147 FEYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAP 200
Query: 485 EVTDARKVSQKADVYSFGVLLLELLTGKAP 514
E+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 201 EIILSKGYNKAVDWWALGVLIYEMAAGYPP 230
>pdb|3C4W|A Chain A, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
pdb|3C4W|B Chain B, Crystal Structure Of G Protein Coupled Receptor Kinase 1
Bound To Atp And Magnesium Chloride At 2.7a
Length = 543
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR----IDGYRAPEVTDARKVSQKAD 497
+ ++K N+LL RISD GLA T + G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 498 VYSFGVLLLELLTGKAPTQA 517
++ GV L E++ + P +A
Sbjct: 372 YFALGVTLYEMIAARGPFRA 391
>pdb|3T8O|A Chain A, Rhodopsin Kinase (grk1) L166k Mutant At 2.5a Resolution
Length = 543
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 37/80 (46%), Gaps = 4/80 (5%)
Query: 442 HGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNR----IDGYRAPEVTDARKVSQKAD 497
+ ++K N+LL RISD GLA T + G+ APE+ + D
Sbjct: 312 YRDLKPENVLLDDDGNVRISDLGLAVELKAGQTKTKGYAGTPGFMAPELLLGEEYDFSVD 371
Query: 498 VYSFGVLLLELLTGKAPTQA 517
++ GV L E++ + P +A
Sbjct: 372 YFALGVTLYEMIAARGPFRA 391
>pdb|3P1A|A Chain A, Structure Of Human Membrane-Associated Tyrosine- And
Threonine- Specific Cdc2-Inhibitory Kinase Myt1 (Pkmyt1)
Length = 311
Score = 40.4 bits (93), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 52/194 (26%), Positives = 81/194 (41%), Gaps = 20/194 (10%)
Query: 325 LGKGTFGTAYKA-TLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD----HENLVPLRA 379
LG G++G +K + E G + AVKR K+ K+ VGS + H V L
Sbjct: 65 LGHGSYGEVFKVRSKEDGRLYAVKRSMSPFRGPKDRARKLAEVGSHEKVGQHPCCVRLEQ 124
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLN--WETRSGLALGASRAIAYLHSKG 437
+ +E +++ + S H P W G A+A+LHS+G
Sbjct: 125 AW---EEGGILYLQTELCGPSLQQHCEAWGASLPEAQVW----GYLRDTLLALAHLHSQG 177
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRIDG---YRAPEVTDARKVSQ 494
H ++K +NI L ++ DFGL + +G Y APE+
Sbjct: 178 LV--HLDVKPANIFLGPRGRCKLGDFGLLVELGTAGAGEVQEGDPRYMAPELLQG-SYGT 234
Query: 495 KADVYSFGVLLLEL 508
ADV+S G+ +LE+
Sbjct: 235 AADVFSLGLTILEV 248
>pdb|3MVJ|A Chain A, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|B Chain B, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
pdb|3MVJ|E Chain E, Human Cyclic Amp-Dependent Protein Kinase Pka Inhibitor
Complex
Length = 371
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/209 (23%), Positives = 91/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 68 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 120
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y+P G + + L R GR + A
Sbjct: 121 FPFLVKLEFSFKDNSNLYMVMEYVPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 175
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+L+ + +++DFG A + TP Y APE
Sbjct: 176 EYLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPE 229
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 230 IILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|3LJ0|A Chain A, Ire1 Complexed With Adp And Quercetin
pdb|3LJ0|B Chain B, Ire1 Complexed With Adp And Quercetin
pdb|3LJ1|A Chain A, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ1|B Chain B, Ire1 Complexed With Cdk12 INHIBITOR III
pdb|3LJ2|A Chain A, Ire1 Complexed With Jak Inhibitor I
pdb|3LJ2|B Chain B, Ire1 Complexed With Jak Inhibitor I
Length = 434
Score = 40.0 bits (92), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 97/234 (41%), Gaps = 47/234 (20%)
Query: 318 LRASAEVLGKGTFGTAYKATLEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHENLVPL 377
L S ++LG G+ GT G VAVKR+ + + E + S DH N++
Sbjct: 16 LVVSEKILGYGSSGTVVFQGSFQGRPVAVKRML-IDFCDIALMEIKLLTESDDHPNVI-- 72
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSAL-LHGNRGAGRTPLNWETRS---GLALGASRAIAYL 433
YY S ++ + + +L+ L ++ L + L + +A+L
Sbjct: 73 -RYYCSETTDRFLYIALELCNLNLQDLVESKNVSDENLKLQKEYNPISLLRQIASGVAHL 131
Query: 434 HSKGPANSHGNIKSSNILLSKS-------------YEARISDFGLA------------HL 468
HS H ++K NIL+S S ISDFGL +L
Sbjct: 132 HSLKII--HRDLKPQNILVSTSSRFTADQQTGAENLRILISDFGLCKKLDSGQXXFRXNL 189
Query: 469 ASPSSTPNRIDGYRAPEVTD-------ARKVSQKADVYSFGVLLLELLT-GKAP 514
+PS T G+RAPE+ + R++++ D++S G + +L+ GK P
Sbjct: 190 NNPSGT----SGWRAPELLEESNNLQTKRRLTRSIDIFSMGCVFYYILSKGKHP 239
>pdb|1Q61|A Chain A, Pka Triple Mutant Model Of Pkb
Length = 350
Score = 40.0 bits (92), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+++ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|1SZM|A Chain A, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
pdb|1SZM|B Chain B, Dual Binding Mode Of Bisindolylmaleimide 2 To Protein
Kinase A (Pka)
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 49/203 (24%), Positives = 86/203 (42%), Gaps = 23/203 (11%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRAIAYLHSK 436
+ +V +Y P G + + L R GR E + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFX---EPHARFYAAQIVLTFEYLHSL 160
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARK 491
+ ++K N+++ + +++DFG A + TP Y APE+ ++
Sbjct: 161 DLI--YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKG 214
Query: 492 VSQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 215 YNKAVDWWALGVLIYEMAAGYPP 237
>pdb|1Q24|A Chain A, Pka Double Mutant Model Of Pkb In Complex With Mgatp
pdb|1Q62|A Chain A, Pka Double Mutant Model Of Pkb
Length = 350
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y P G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+++ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLMIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|2WTK|C Chain C, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
pdb|2WTK|F Chain F, Structure Of The Heterotrimeric Lkb1-Stradalpha-Mo25alpha
Complex
Length = 305
Score = 39.7 bits (91), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 40/172 (23%), Positives = 74/172 (43%), Gaps = 16/172 (9%)
Query: 356 EKEFREKMEVVGSMDHENLVPLRAYYYSRDEK--LLVHDYMPMGSLSALLHGNRGAGRTP 413
E +++++++ + H+N++ L Y+ +++ +V +Y G L + R P
Sbjct: 50 EANVKKEIQLLRRLRHKNVIQLVDVLYNEEKQKMYMVMEYCVCGMQEML--DSVPEKRFP 107
Query: 414 LNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASP-- 471
+ G + YLHS+G H +IK N+LL+ +IS G+A P
Sbjct: 108 VC--QAHGYFCQLIDGLEYLHSQGIV--HKDIKPGNLLLTTGGTLKISALGVAEALHPFA 163
Query: 472 ----SSTPNRIDGYRAPEVTDARKVSQ--KADVYSFGVLLLELLTGKAPTQA 517
T ++ PE+ + K D++S GV L + TG P +
Sbjct: 164 ADDTCRTSQGSPAFQPPEIANGLDTFSGFKVDIWSAGVTLYNITTGLYPFEG 215
>pdb|2R9U|A Chain A, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|B Chain B, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|C Chain C, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
pdb|2R9U|D Chain D, Crystal Structure Of Lamprey Variable Lymphocyte Receptor
2913 Ectodomain
Length = 174
Score = 39.7 bits (91), Expect = 0.005, Method: Composition-based stats.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 8/98 (8%)
Query: 63 TELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNN 122
T ++ ++R ++ IP+D +L +L N + PG+ L NL +L N
Sbjct: 15 TLVNCQNIRLASVPAGIPTDKQRL------WLNNNQITKLEPGVFDHLVNLQQLYFNSNK 68
Query: 123 FSGTISADFNKLTRLGTLYLQENQLTGSIPDLGAFSSL 160
+ + F+KLT+L L L +N L SIP GAF +L
Sbjct: 69 LTAIPTGVFDKLTQLTQLDLNDNHLK-SIPR-GAFDNL 104
Score = 35.0 bits (79), Expect = 0.14, Method: Composition-based stats.
Identities = 23/83 (27%), Positives = 34/83 (40%)
Query: 63 TELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIRLNLAKNN 122
T+ + L N + P F L NL+ LY N + G+ L L +L+L N+
Sbjct: 33 TDKQRLWLNNNQITKLEPGVFDHLVNLQQLYFNSNKLTAIPTGVFDKLTQLTQLDLNDNH 92
Query: 123 FSGTISADFNKLTRLGTLYLQEN 145
F+ L L +YL N
Sbjct: 93 LKSIPRGAFDNLKSLTHIYLYNN 115
>pdb|3KJ4|A Chain A, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
pdb|3KJ4|D Chain D, Structure Of Rat Nogo Receptor Bound To 1d9 Antagonist
Antibody
Length = 286
Score = 39.7 bits (91), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 36/123 (29%), Positives = 46/123 (37%), Gaps = 4/123 (3%)
Query: 56 PIAIGNLTELHTVSLRFNALRGTIPSDFAKLSNLRNLYLQGNLFSGEIPGLLFSLGNLIR 115
P L LHT+ L L+ P F L+ L+ LYLQ N LGNL
Sbjct: 97 PTTFRGLGHLHTLHLDRCGLQELGPGLFRGLAALQYLYLQDNNLQALPDNTFRDLGNLTH 156
Query: 116 LNLAKNNFSGTISADFNKLTRLGTLYLQENQLTGSIP----DLGAFSSLAQFNVSFNKLN 171
L L N F L L L L +N + P DLG +L F + + L
Sbjct: 157 LFLHGNRIPSVPEHAFRGLHSLDRLLLHQNHVARVHPHAFRDLGRLMTLYLFANNLSMLP 216
Query: 172 GSI 174
+
Sbjct: 217 AEV 219
>pdb|3L9M|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9M|B Chain B, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 18
pdb|3L9N|A Chain A, Crystal Structure Of Pkab3 (Pka Triple Mutant V123a,
L173m, Q181k) With Compound 27
Length = 351
Score = 39.3 bits (90), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 49/209 (23%), Positives = 90/209 (43%), Gaps = 35/209 (16%)
Query: 323 EVLGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMD 370
+ LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 48 KTLGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKR------ILQAVN 100
Query: 371 HENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAI 430
LV L + +V +Y P G + + L R GR + A
Sbjct: 101 FPFLVKLEFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTF 155
Query: 431 AYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPE 485
YLHS + ++K N+++ + +++DFG A + TP Y APE
Sbjct: 156 EYLHSLDLI--YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPE 209
Query: 486 VTDARKVSQKADVYSFGVLLLELLTGKAP 514
+ ++ ++ D ++ GVL+ E+ G P
Sbjct: 210 IILSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|2PML|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp Analogue
pdb|2PMN|X Chain X, Crystal Structure Of Pfpk7 In Complex With An Atp-Site
Inhibitor
pdb|2PMO|X Chain X, Crystal Structure Of Pfpk7 In Complex With Hymenialdisine
Length = 348
Score = 39.3 bits (90), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 35/171 (20%), Positives = 73/171 (42%), Gaps = 22/171 (12%)
Query: 358 EFREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSA------LLHGNRGAGR 411
+F+ +++++ + +E + + DE ++++YM S+ +L N
Sbjct: 89 DFKNELQIITDIKNEYCLTCEGIITNYDEVYIIYEYMENDSILKFDEYFFVLDKNYTCF- 147
Query: 412 TPLNWETRSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASP 471
P+ + + + +Y+H++ H ++K SNIL+ K+ ++SDFG S
Sbjct: 148 IPI--QVIKCIIKSVLNSFSYIHNEKNI-CHRDVKPSNILMDKNGRVKLSDFG----ESE 200
Query: 472 SSTPNRIDGYRA------PEV--TDARKVSQKADVYSFGVLLLELLTGKAP 514
+I G R PE ++ K D++S G+ L + P
Sbjct: 201 YMVDKKIKGSRGTYEFMPPEFFSNESSYNGAKVDIWSLGICLYVMFYNVVP 251
>pdb|3BHH|A Chain A, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|B Chain B, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|C Chain C, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
pdb|3BHH|D Chain D, Crystal Structure Of Human Calcium/calmodulin-dependent
Protein Kinase Iib Isoform 1 (camk2b)
Length = 295
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/95 (30%), Positives = 43/95 (45%), Gaps = 15/95 (15%)
Query: 431 AYLHSKGPANSHGNIKSSNILLS---KSYEARISDFGLAHLASP--------SSTPNRID 479
A LH H ++K N+LL+ K +++DFGLA + TP
Sbjct: 115 AVLHCHQMGVVHRDLKPENLLLASKCKGAAVKLADFGLAIEVQGDQQAWFGFAGTP---- 170
Query: 480 GYRAPEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
GY +PEV + D+++ GV+L LL G P
Sbjct: 171 GYLSPEVLRKEAYGKPVDIWACGVILYILLVGYPP 205
>pdb|3AMA|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Jnj- 7706621
pdb|3AMB|A Chain A, Protein Kinase A Sixfold Mutant Model Of Aurora B With
Inhibitor Vx- 680
Length = 351
Score = 38.9 bits (89), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 50/207 (24%), Positives = 89/207 (42%), Gaps = 35/207 (16%)
Query: 325 LGKGTFG----TAYKAT--------LEMGIVVAVKRLKDVTVSEKEFREKMEVVGSMDHE 372
LG G+FG +K T L+ VV +K+++ T++EK ++ +++
Sbjct: 50 LGTGSFGRVMLVKHKETGNHYAMKILDKQKVVKLKQIEH-TLNEKRIQQ------AVNFP 102
Query: 373 NLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAY 432
LV L + +V +Y P G + + L R GR + A Y
Sbjct: 103 FLVKLEFSFKDNSNLYMVLEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEY 157
Query: 433 LHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVT 487
LHS + ++K N+L+ + +++DFG A + TP Y APE+
Sbjct: 158 LHSLDLI--YRDLKPENLLIDQQGYIKVADFGFAKRVKGRTWXLCGTPE----YLAPEII 211
Query: 488 DARKVSQKADVYSFGVLLLELLTGKAP 514
++ ++ D ++ GVL+ E+ G P
Sbjct: 212 LSKGYNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3VQU|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With 4- [(4-Amino-5-Cyano-6-Ethoxypyridin-2-
Yl)amino]benzamide
Length = 320
Score = 38.9 bits (89), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 359 FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
+R ++ + + + +R Y Y ++ + YM M + L+ ++ WE
Sbjct: 53 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYI---YMVMECGNIDLNSWLKKKKSIDPWER 109
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI 478
+S A+ +H G H ++K +N L+ ++ DFG+A+ P +T
Sbjct: 110 KSYWK-NMLEAVHTIHQHGIV--HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVK 165
Query: 479 DG------YRAPEVTDARKVSQK-----------ADVYSFGVLLLELLTGKAPTQALLNE 521
D Y PE S++ +DV+S G +L + GK P Q ++N+
Sbjct: 166 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 225
>pdb|3CEK|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(ttk)
pdb|3GFW|A Chain A, Crystal Structure Of Human Dual Specificity Protein Kinase
(Ttk) In Complex With A Pyrolo-Pyridin Ligand
Length = 313
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 359 FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
+R ++ + + + +R Y Y ++ + YM M + L+ ++ WE
Sbjct: 73 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYI---YMVMECGNIDLNSWLKKKKSIDPWER 129
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI 478
+S A+ +H G H ++K +N L+ ++ DFG+A+ P +T
Sbjct: 130 KSYWK-NMLEAVHTIHQHGIV--HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVK 185
Query: 479 D------GYRAPEVTDARKVSQK-----------ADVYSFGVLLLELLTGKAPTQALLNE 521
D Y PE S++ +DV+S G +L + GK P Q ++N+
Sbjct: 186 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 245
>pdb|2X9E|A Chain A, Human Mps1 In Complex With Nms-P715
Length = 317
Score = 38.5 bits (88), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 359 FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
+R ++ + + + +R Y Y ++ + YM M + L+ ++ WE
Sbjct: 57 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYI---YMVMECGNIDLNSWLKKKKSIDPWER 113
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI 478
+S A+ +H G H ++K +N L+ ++ DFG+A+ P +T
Sbjct: 114 KSYWK-NMLEAVHTIHQHGIV--HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVK 169
Query: 479 D------GYRAPEVTDARKVSQK-----------ADVYSFGVLLLELLTGKAPTQALLNE 521
D Y PE S++ +DV+S G +L + GK P Q ++N+
Sbjct: 170 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 229
>pdb|3GBZ|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia
pdb|3GC0|A Chain A, Structure Of The Cmgc Cdk Kinase From Giardia Lamblia In
Complex With Amp
Length = 329
Score = 38.5 bits (88), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 49/200 (24%), Positives = 84/200 (42%), Gaps = 24/200 (12%)
Query: 325 LGKGTFGTAYKATLEM-GIVVAVKRLK----DVTVSEKEFREKMEVVGSMDHENLVPLRA 379
LG+GT+G YKA + VA+KR++ + V RE + ++ + H N++ L++
Sbjct: 42 LGEGTYGEVYKAIDTVTNETVAIKRIRLEHEEEGVPGTAIRE-VSLLKELQHRNIIELKS 100
Query: 380 YYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPA 439
+ L+ +Y L + N + + + HS+
Sbjct: 101 VIHHNHRLHLIFEYAE-NDLKKYMDKNPDVSMRVIK-----SFLYQLINGVNFCHSR--R 152
Query: 440 NSHGNIKSSNILLSKSYEA-----RISDFGLAH---LASPSSTPNRID-GYRAPEV-TDA 489
H ++K N+LLS S + +I DFGLA + T I YR PE+ +
Sbjct: 153 CLHRDLKPQNLLLSVSDASETPVLKIGDFGLARAFGIPIRQFTHEIITLWYRPPEILLGS 212
Query: 490 RKVSQKADVYSFGVLLLELL 509
R S D++S + E+L
Sbjct: 213 RHYSTSVDIWSIACIWAEML 232
>pdb|2VO0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
Length = 351
Score = 38.5 bits (88), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ L L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y P G + + L R GR + A YLHS
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 162
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+++ + +++DFG A + TP Y APE+ ++
Sbjct: 163 LI--YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 216
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|2JDT|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
Isoquinoline-5- Sulfonic Acid (2-(2-(4-Chlorobenzyloxy)
Ethylamino)ethyl) Amide
pdb|2JDV|A Chain A, Structure Of Pka-Pkb Chimera Complexed With A-443654
pdb|2UVX|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 7-Azaindole
pdb|2UW4|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
2-(4-(5-Methyl- 1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW7|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-Chloro-
Phenyl)-4-(4-(1h-Pyrazol-4-Yl)-Phenyl)-Piperidine
pdb|4AXA|A Chain A, Structure Of Pka-pkb Chimera Complexed With
(1s)-2-amino-1-(
4-chlorophenyl)-1-(4-(1h-pyrazol-4-yl)phenyl)ethan-1-ol
Length = 351
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 47/202 (23%), Positives = 84/202 (41%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ L L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y P G + + L R GR + A YLHS
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 162
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+++ + +++DFG A + TP Y APE+ ++
Sbjct: 163 LI--YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 216
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 217 NKAVDWWALGVLIYEMAAGYPP 238
>pdb|2I6L|A Chain A, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
pdb|2I6L|B Chain B, Crystal Structure Of Human Mitogen Activated Protein
Kinase 6 (Mapk6)
Length = 320
Score = 38.1 bits (87), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 61/240 (25%), Positives = 101/240 (42%), Gaps = 46/240 (19%)
Query: 301 NLVFFGKGDRAFDLEDLLRASAEVLGKGTFGTAYKATL-EMGIVVAVKR--LKDVTVSEK 357
N+ F G R DL+ L G G G + A + VA+K+ L D +
Sbjct: 3 NIHGFDLGSRYMDLKPL--------GCGGNGLVFSAVDNDCDKRVAIKKIVLTDPQSVKH 54
Query: 358 EFREKMEVVGSMDHENLVPLRAYYYSRDEKL--------------LVHDYMPMGSLSALL 403
RE ++++ +DH+N+V + +L +V +YM + L
Sbjct: 55 ALRE-IKIIRRLDHDNIVKVFEILGPSGSQLTDDVGSLTELNSVYIVQEYMETDLANVLE 113
Query: 404 HGNRGAGRTPLNWETRSGLALGASRAIAYLHSKGPANS-HGNIKSSNILL-SKSYEARIS 461
G PL E R + Y+HS AN H ++K +N+ + ++ +I
Sbjct: 114 QG-------PLLEEHARLFMYQLLRGLKYIHS---ANVLHRDLKPANLFINTEDLVLKIG 163
Query: 462 DFGLAHLASP--SSTPNRIDG-----YRAPEVTDARKVSQKA-DVYSFGVLLLELLTGKA 513
DFGLA + P S + +G YR+P + + KA D+++ G + E+LTGK
Sbjct: 164 DFGLARIMDPHYSHKGHLSEGLVTKWYRSPRLLLSPNNYTKAIDMWAAGCIFAEMLTGKT 223
>pdb|3C0G|A Chain A, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0G|B Chain B, Cask Cam-kinase Domain- 3'-amp Complex, P1 Form
pdb|3C0H|A Chain A, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0H|B Chain B, Cask Cam-Kinase Domain- Amppnp Complex, P1 Form
pdb|3C0I|A Chain A, Cask Cam-Kinase Domain- 3'-Amp Complex, P212121 Form
Length = 351
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 27/212 (12%)
Query: 322 AEVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHEN 373
EV+GKG F + E G AVK + DV +S ++ + + + + H +
Sbjct: 29 CEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPH 87
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
+V L Y S +V ++M L + AG + S A+ Y
Sbjct: 88 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILEALRYC 146
Query: 434 HSKGPANSHGNIKSSNILLSK---SYEARISDFGLAHLASPSS--------TPNRIDGYR 482
H H ++K +LL+ S ++ FG+A S TP+ +
Sbjct: 147 HDNNII--HRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH----FM 200
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
APEV + DV+ GV+L LL+G P
Sbjct: 201 APEVVKREPYGKPVDVWGCGVILFILLSGCLP 232
>pdb|2UVY|A Chain A, Structure Of Pka-pkb Chimera Complexed With Methyl-(4-(9h-
Purin-6-yl)-benzyl)-amine
pdb|2UVZ|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
C-Phenyl-C-(4-( 9h-Purin-6-Yl)-Phenyl)-Methylamine
pdb|2UW0|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 6-(4-(4-(4-
Chloro-Phenyl)-Piperidin-4-Yl)-Phenyl)-9h-Purine
pdb|2UW3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 5-Methyl-4-
Phenyl-1h-Pyrazole
pdb|2UW5|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (R)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With (S)-2-(4-
Chloro-Phenyl)-2-(4-1h-Pyrazol-4-Yl)-Phenyl)-Ethylamine
pdb|2UW8|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 2-(4-Chloro-
Phenyl)-2-Phenyl-Ethylamine
pdb|2VNW|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)methanamine
pdb|2VNY|A Chain A, Structure Of Pka-Pkb Chimera Complexed With
(1-(9h-Purin-6- Yl)piperidin-4-Yl)amine
pdb|2VO3|A Chain A, Structure Of Pka-Pkb Chimera Complexed With C-(4-(4-
Chlorophenyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Yl)methylamine
pdb|2VO6|A Chain A, Structure Of Pka-Pkb Chimera Complexed With 4-(4-
Chlorobenzyl)-1-(7h-Pyrrolo(2,
3-D)pyrimidin-4-Yl)piperidin- 4-Ylamine
Length = 351
Score = 38.1 bits (87), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 48/203 (23%), Positives = 85/203 (41%), Gaps = 23/203 (11%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ L L
Sbjct: 48 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLTKL 107
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGL-ALGASRAIAYLHSK 436
+ +V +Y P G + + L R GR E + A YLHS
Sbjct: 108 EFSFKDNSNLYMVMEYAPGGEMFSHL---RRIGRFX---EPHARFYAAQIVLTFEYLHSL 161
Query: 437 GPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARK 491
+ ++K N+++ + +++DFG A + TP Y APE+ ++
Sbjct: 162 DLI--YRDLKPENLMIDQQGYIKVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKG 215
Query: 492 VSQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 YNKAVDWWALGVLIYEMAAGYPP 238
>pdb|3DBQ|A Chain A, Crystal Structure Of Ttk Kinase Domain
Length = 343
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 359 FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
+R ++ + + + +R Y Y ++ + YM M + L+ ++ WE
Sbjct: 54 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYI---YMVMECGNIDLNSWLKKKKSIDPWER 110
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI 478
+S A+ +H G H ++K +N L+ ++ DFG+A+ P +T
Sbjct: 111 KSYWK-NMLEAVHTIHQHGIV--HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVK 166
Query: 479 D------GYRAPEVTDARKVSQK-----------ADVYSFGVLLLELLTGKAPTQALLNE 521
D Y PE S++ +DV+S G +L + GK P Q ++N+
Sbjct: 167 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 226
>pdb|3TAC|A Chain A, Crystal Structure Of The Liprin-AlphaCASK COMPLEX
Length = 361
Score = 37.7 bits (86), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 52/212 (24%), Positives = 83/212 (39%), Gaps = 27/212 (12%)
Query: 322 AEVLGKGTFGTAYKAT-LEMGIVVAVKRLKDVT-------VSEKEFREKMEVVGSMDHEN 373
EV+GKG F + E G AVK + DV +S ++ + + + + H +
Sbjct: 31 CEVIGKGPFSVVRRCINRETGQQFAVK-IVDVAKFTSSPGLSTEDLKREASICHMLKHPH 89
Query: 374 LVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYL 433
+V L Y S +V ++M L + AG + S A+ Y
Sbjct: 90 IVELLETYSSDGMLYMVFEFMDGADLCFEIVKRADAGFV-YSEAVASHYMRQILEALRYC 148
Query: 434 HSKGPANSHGNIKSSNILLSK---SYEARISDFGLAHLASPSS--------TPNRIDGYR 482
H H ++K +LL+ S ++ FG+A S TP+ +
Sbjct: 149 HDNNII--HRDVKPHCVLLASKENSAPVKLGGFGVAIQLGESGLVAGGRVGTPH----FM 202
Query: 483 APEVTDARKVSQKADVYSFGVLLLELLTGKAP 514
APEV + DV+ GV+L LL+G P
Sbjct: 203 APEVVKREPYGKPVDVWGCGVILFILLSGCLP 234
>pdb|3HMN|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With Atp
pdb|3HMO|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With The Inhibitor Staurosporine
pdb|3HMP|A Chain A, Crystal Structure Of Human Mps1 Catalytic Domain In
Complex With A Quinazolin Ligand Compound 4
Length = 342
Score = 37.7 bits (86), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 39/180 (21%), Positives = 74/180 (41%), Gaps = 24/180 (13%)
Query: 359 FREKMEVVGSMDHENLVPLRAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWET 418
+R ++ + + + +R Y Y ++ + YM M + L+ ++ WE
Sbjct: 101 YRNEIAYLNKLQQHSDKIIRLYDYEITDQYI---YMVMECGNIDLNSWLKKKKSIDPWER 157
Query: 419 RSGLALGASRAIAYLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSSTPNRI 478
+S A+ +H G H ++K +N L+ ++ DFG+A+ P +T
Sbjct: 158 KSYWK-NMLEAVHTIHQHGIV--HSDLKPANFLIVDGM-LKLIDFGIANQMQPDTTSVVK 213
Query: 479 DG------YRAPEVTDARKVSQK-----------ADVYSFGVLLLELLTGKAPTQALLNE 521
D Y PE S++ +DV+S G +L + GK P Q ++N+
Sbjct: 214 DSQVGTVNYMPPEAIKDMSSSRENGKSKSKISPKSDVWSLGCILYYMTYGKTPFQQIINQ 273
>pdb|1YDT|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H89 Protein
Kinase Inhibitor N-[2-
(4-Bromocinnamylamino)ethyl]-5-Isoquinoline
pdb|1YDR|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H7 Protein
Kinase Inhibitor 1-(5-
Isoquinolinesulfonyl)-2-Methylpiperazine
pdb|1YDS|E Chain E, Structure Of Camp-Dependent Protein Kinase,
Alpha-Catalytic Subunit In Complex With H8 Protein
Kinase Inhibitor [n-(2-Methylamino)ethyl]-5-
Isoquinolinesulfonamide
Length = 350
Score = 37.7 bits (86), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 48/202 (23%), Positives = 85/202 (42%), Gaps = 21/202 (10%)
Query: 323 EVLGKGTFGTAYKAT-LEMGIVVAVKRL-KDVTVSEKEFREKM---EVVGSMDHENLVPL 377
+ LG G+FG +E G A+K L K V K+ + ++ +++ LV L
Sbjct: 47 KTLGTGSFGRVMLVKHMETGNHYAMKILDKQKVVKLKQIEHTLNEKRILQAVNFPFLVKL 106
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
+ +V +Y+ G + + L R GR + A YLHS
Sbjct: 107 EFSFKDNSNLYMVMEYVAGGEMFSHL---RRIGR--FSEPHARFYAAQIVLTFEYLHSLD 161
Query: 438 PANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEVTDARKV 492
+ ++K N+L+ + +++DFG A + TP Y APE+ ++
Sbjct: 162 LI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGRTWXLCGTPE----YLAPEIILSKGY 215
Query: 493 SQKADVYSFGVLLLELLTGKAP 514
++ D ++ GVL+ E+ G P
Sbjct: 216 NKAVDWWALGVLIYEMAAGYPP 237
>pdb|4DFY|A Chain A, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
pdb|4DFY|E Chain E, Crystal Structure Of R194a Mutant Of Camp-Dependent
Protein Kinase With Unphosphorylated Activation Loop
Length = 371
Score = 37.7 bits (86), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 44/88 (50%), Gaps = 11/88 (12%)
Query: 432 YLHSKGPANSHGNIKSSNILLSKSYEARISDFGLAHLASPSS-----TPNRIDGYRAPEV 486
YLHS + ++K N+L+ + +++DFG A ++ TP Y APE+
Sbjct: 177 YLHSLDLI--YRDLKPENLLIDQQGYIQVTDFGFAKRVKGATWTLCGTPE----YLAPEI 230
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAP 514
++ ++ D ++ GVL+ E+ G P
Sbjct: 231 ILSKGYNKAVDWWALGVLIYEMAAGYPP 258
>pdb|2VZ6|A Chain A, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
pdb|2VZ6|B Chain B, Structure Of Human Calcium Calmodulin Dependent Protein
Kinase Type Ii Alpha (Camk2a) In Complex With Indirubin
E804
Length = 313
Score = 37.4 bits (85), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 51/208 (24%), Positives = 82/208 (39%), Gaps = 28/208 (13%)
Query: 323 EVLGKGTFGTAYKATLEM-GIVVAVKRLKDVTVSEKEFREKME----VVGSMDHENLVPL 377
E LGKG F + + G A K + +S ++ +K+E + + H N+V L
Sbjct: 28 EELGKGAFSVVRRCVKVLAGQEYAAKIINTKKLSARD-HQKLEREARICRLLKHPNIVRL 86
Query: 378 RAYYYSRDEKLLVHDYMPMGSLSALLHGNRGAGRTPLNWETRSGLALGASRAIAYLHSKG 437
L+ D + G L + R + S A+ + H G
Sbjct: 87 HDSISEEGHHYLIFDLVTGGELFEDI-----VAREYYSEADASHCIQQILEAVLHCHQMG 141
Query: 438 PANSHGNIKSSNILLS---KSYEARISDFGLAHLASP--------SSTPNRIDGYRAPEV 486
H ++K N+LL+ K +++DFGLA + TP GY +PEV
Sbjct: 142 VV--HRDLKPENLLLASKLKGAAVKLADFGLAIEVEGEQQAWFGFAGTP----GYLSPEV 195
Query: 487 TDARKVSQKADVYSFGVLLLELLTGKAP 514
+ D+++ GV+L LL G P
Sbjct: 196 LRKDPYGKPVDLWACGVILYILLVGYPP 223
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.134 0.387
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 15,465,512
Number of Sequences: 62578
Number of extensions: 605887
Number of successful extensions: 3776
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 524
Number of HSP's that attempted gapping in prelim test: 1783
Number of HSP's gapped (non-prelim): 1224
length of query: 606
length of database: 14,973,337
effective HSP length: 104
effective length of query: 502
effective length of database: 8,465,225
effective search space: 4249542950
effective search space used: 4249542950
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 54 (25.4 bits)