Query 037906
Match_columns 80
No_of_seqs 105 out of 216
Neff 3.3
Searched_HMMs 13730
Date Mon Mar 25 09:02:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/037906.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/037906hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1g9pa_ g.3.6.2 (A:) Atracotox 55.4 2.5 0.00018 23.1 1.4 18 41-58 28-45 (45)
2 d1dx5i2 g.3.11.1 (I:388-422) T 52.6 1.4 0.0001 23.3 0.0 16 44-59 14-29 (35)
3 d1wo8a1 c.24.1.2 (A:1-126) Met 50.6 3.9 0.00028 25.2 1.9 33 27-59 61-96 (126)
4 d1iica1 d.108.1.2 (A:34-218) N 48.8 2.2 0.00016 28.6 0.6 24 35-59 108-131 (185)
5 d1vmda_ c.24.1.2 (A:) Methylgl 41.9 7.6 0.00055 24.9 2.4 33 27-59 71-106 (156)
6 d1ltqa1 c.108.1.9 (A:153-301) 39.1 14 0.0011 20.8 3.2 23 28-50 43-65 (149)
7 d1kmda_ d.189.1.1 (A:) Vam7p { 34.5 11 0.00078 22.3 2.1 27 45-71 65-94 (117)
8 d1b93a_ c.24.1.2 (A:) Methylgl 34.1 8.3 0.00061 24.5 1.6 33 27-59 71-106 (148)
9 d1wu9a1 a.245.1.1 (A:191-249) 32.8 12 0.00088 21.0 2.0 15 57-71 19-33 (59)
10 d1rxta1 d.108.1.2 (A:78-218) N 28.8 7.6 0.00055 25.2 0.7 16 35-50 64-79 (141)
11 d1iyka1 d.108.1.2 (A:60-224) N 24.1 10 0.00073 25.2 0.6 15 36-50 87-101 (165)
12 d1pn0a2 c.47.1.10 (A:462-662) 21.9 13 0.00092 24.4 0.8 19 52-70 158-183 (201)
13 d1ii5a_ c.94.1.1 (A:) Glutamat 21.2 16 0.0012 21.7 1.1 20 50-69 153-173 (226)
14 d1rbli_ d.73.1.1 (I:) Ribulose 20.8 21 0.0015 22.1 1.6 15 35-49 95-109 (109)
15 d1nn6a_ b.47.1.2 (A:) Chymase 20.3 31 0.0023 20.5 2.4 33 36-71 187-219 (224)
No 1
>d1g9pa_ g.3.6.2 (A:) Atracotoxin-hv2a {Funnel-web spider (Hadronyche versuta) [TaxId: 6904]}
Probab=55.40 E-value=2.5 Score=23.13 Aligned_cols=18 Identities=44% Similarity=0.643 Sum_probs=14.9
Q ss_pred EEeecCCCccccccchhh
Q 037906 41 ACLSSPPSHCGRADGYIL 58 (80)
Q Consensus 41 A~IsSRPGQ~GraDGyIL 58 (80)
.|+||-||-+|-.-|-||
T Consensus 28 scvssgpglvggilggil 45 (45)
T d1g9pa_ 28 SCVSSGPGLVGGILGGIL 45 (45)
T ss_dssp EEECCCSSCSSCSSCCCC
T ss_pred ceeccCCchhhheecccC
Confidence 599999999998777664
No 2
>d1dx5i2 g.3.11.1 (I:388-422) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}
Probab=52.62 E-value=1.4 Score=23.31 Aligned_cols=16 Identities=31% Similarity=0.806 Sum_probs=13.6
Q ss_pred ecCCCccccccchhhh
Q 037906 44 SSPPSHCGRADGYILE 59 (80)
Q Consensus 44 sSRPGQ~GraDGyILE 59 (80)
-+.|+-|-=+|||||+
T Consensus 14 P~~p~~C~CPeGyIld 29 (35)
T d1dx5i2 14 PNTQASCECPEGYILD 29 (35)
T ss_dssp TTSTTCEECCTTEEEE
T ss_pred CCCCCcccCCCceEec
Confidence 3578888999999997
No 3
>d1wo8a1 c.24.1.2 (A:1-126) Methylglyoxal synthase, MgsA {Thermus thermophilus [TaxId: 274]}
Probab=50.56 E-value=3.9 Score=25.20 Aligned_cols=33 Identities=24% Similarity=0.282 Sum_probs=25.8
Q ss_pred ChHHHHHHhcCceeEEe---ecCCCccccccchhhh
Q 037906 27 DPHIEEQFASGRLLACL---SSPPSHCGRADGYILE 59 (80)
Q Consensus 27 ~~~L~eqf~~GrllA~I---sSRPGQ~GraDGyILE 59 (80)
+|.+.+.+..|.+=.+| ...-|+-.+.|||.|-
T Consensus 61 ~~~i~d~I~~g~IdlVIn~~~~~~~~~~~~D~~~iR 96 (126)
T d1wo8a1 61 DLQIGARVAEGKVLAVVFLQDPLTAKPHEPDVQALM 96 (126)
T ss_dssp HHHHHHHHHTTCEEEEEEECCTTSCCTTHHHHHHHH
T ss_pred CCCHHHHHHcCCccEEEEecCCCCCCcccccHHHHH
Confidence 48899999999999888 3333455688999886
No 4
>d1iica1 d.108.1.2 (A:34-218) N-myristoyl transferase, NMT {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=48.81 E-value=2.2 Score=28.64 Aligned_cols=24 Identities=21% Similarity=0.301 Sum_probs=17.1
Q ss_pred hcCceeEEeecCCCccccccchhhh
Q 037906 35 ASGRLLACLSSPPSHCGRADGYILE 59 (80)
Q Consensus 35 ~~GrllA~IsSRPGQ~GraDGyILE 59 (80)
.+++|+|+||+||=.+ +..|.++.
T Consensus 108 ~~~KLvg~Is~~P~~i-~i~~~~~~ 131 (185)
T d1iica1 108 ETQKLVAFISAIPVTL-GVRGKQVP 131 (185)
T ss_dssp TTCCEEEEEEEEEEEE-EETTEEEE
T ss_pred cCCcEEEEEeeeEEEE-EEcCeEEE
Confidence 3689999999999877 33333433
No 5
>d1vmda_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Thermotoga maritima [TaxId: 2336]}
Probab=41.86 E-value=7.6 Score=24.91 Aligned_cols=33 Identities=18% Similarity=0.165 Sum_probs=27.0
Q ss_pred ChHHHHHHhcCceeEEee---cCCCccccccchhhh
Q 037906 27 DPHIEEQFASGRLLACLS---SPPSHCGRADGYILE 59 (80)
Q Consensus 27 ~~~L~eqf~~GrllA~Is---SRPGQ~GraDGyILE 59 (80)
+|.+.+.+..|.+-.+|- .--|+....|||.|-
T Consensus 71 ~p~i~d~I~~geI~lVIn~~d~~~~~~~~~D~~~IR 106 (156)
T d1vmda_ 71 DQQIGAMIAEGKIDVLIFFWDPLEPQAHDVDVKALI 106 (156)
T ss_dssp HHHHHHHHHTTSCCEEEEECCSSSCCTTSCCHHHHH
T ss_pred CCCHHHHHHcCCCCEEEECCCCCCCccccchHHHHH
Confidence 588999999999999883 335677889999875
No 6
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=39.06 E-value=14 Score=20.81 Aligned_cols=23 Identities=13% Similarity=-0.029 Sum_probs=18.0
Q ss_pred hHHHHHHhcCceeEEeecCCCcc
Q 037906 28 PHIEEQFASGRLLACLSSPPSHC 50 (80)
Q Consensus 28 ~~L~eqf~~GrllA~IsSRPGQ~ 50 (80)
..|......|..++.+|+||+-+
T Consensus 43 ~~l~~l~~~G~~Iii~T~R~~~~ 65 (149)
T d1ltqa1 43 ELSKMYALMGYQIVVVSGRESGT 65 (149)
T ss_dssp HHHHHHHHTTCEEEEEECSCCCC
T ss_pred HHHHHHHhccCeEEEEecCcHHH
Confidence 34555667899999999999754
No 7
>d1kmda_ d.189.1.1 (A:) Vam7p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=34.48 E-value=11 Score=22.32 Aligned_cols=27 Identities=11% Similarity=0.153 Sum_probs=22.0
Q ss_pred cCCCccccccchhhh---HHHHHHHHHHHh
Q 037906 45 SPPSHCGRADGYILE---KELEFYIKNIQR 71 (80)
Q Consensus 45 SRPGQ~GraDGyILE---kELeFY~kk~~~ 71 (80)
+.+++.|.-|-.++| .+|+.|++.|-.
T Consensus 65 ~~~~~~~~~~~~~ie~R~~~Le~yL~~ll~ 94 (117)
T d1kmda_ 65 DRRWQRRYDDPEMIDERRIGLERFLNELYN 94 (117)
T ss_dssp CSTTCCCTTCHHHHHHHHTTHHHHHHHHHC
T ss_pred ccccccCCCCHHHHHHHHHHHHHHHHHHHc
Confidence 445667899999999 799999998843
No 8
>d1b93a_ c.24.1.2 (A:) Methylglyoxal synthase, MgsA {Escherichia coli [TaxId: 562]}
Probab=34.15 E-value=8.3 Score=24.47 Aligned_cols=33 Identities=12% Similarity=0.040 Sum_probs=26.7
Q ss_pred ChHHHHHHhcCceeEEeec---CCCccccccchhhh
Q 037906 27 DPHIEEQFASGRLLACLSS---PPSHCGRADGYILE 59 (80)
Q Consensus 27 ~~~L~eqf~~GrllA~IsS---RPGQ~GraDGyILE 59 (80)
+|.+.+.+..|++=.+|-- --|+..+.|||.|-
T Consensus 71 ~p~I~d~I~~g~I~lVIn~~d~~~~~~~~~D~~~IR 106 (148)
T d1b93a_ 71 DQQVGALISEGKIDVLIFFWDPLNAVPHDPDVKALL 106 (148)
T ss_dssp HHHHHHHHHTTCCCEEEEECCTTSCCTTHHHHHHHH
T ss_pred CcCHHHHHHcCCccEEEEccCCcCCCcCcccHHHHH
Confidence 4789999999999998843 34677788999876
No 9
>d1wu9a1 a.245.1.1 (A:191-249) Microtubule-associated protein EB1, C-terminal dimerization domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.78 E-value=12 Score=21.01 Aligned_cols=15 Identities=40% Similarity=0.694 Sum_probs=12.0
Q ss_pred hhhHHHHHHHHHHHh
Q 037906 57 ILEKELEFYIKNIQR 71 (80)
Q Consensus 57 ILEkELeFY~kk~~~ 71 (80)
.||+|=+||-.|++.
T Consensus 19 ~lEkERdFYF~KLRd 33 (59)
T d1wu9a1 19 DLEKERDFYFGKLRN 33 (59)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 377999999888753
No 10
>d1rxta1 d.108.1.2 (A:78-218) N-myristoyl transferase, NMT {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.75 E-value=7.6 Score=25.19 Aligned_cols=16 Identities=25% Similarity=0.476 Sum_probs=13.8
Q ss_pred hcCceeEEeecCCCcc
Q 037906 35 ASGRLLACLSSPPSHC 50 (80)
Q Consensus 35 ~~GrllA~IsSRPGQ~ 50 (80)
.+++|+|+||++|-.+
T Consensus 64 ~~~kLVgfIs~~P~~i 79 (141)
T d1rxta1 64 SSRKLVGFISAIPANI 79 (141)
T ss_dssp SSSCEEEEECCEECCC
T ss_pred cCCeEEEEEeceEEEE
Confidence 4789999999999765
No 11
>d1iyka1 d.108.1.2 (A:60-224) N-myristoyl transferase, NMT {Yeast (Candida albicans) [TaxId: 5476]}
Probab=24.09 E-value=10 Score=25.22 Aligned_cols=15 Identities=27% Similarity=0.640 Sum_probs=12.9
Q ss_pred cCceeEEeecCCCcc
Q 037906 36 SGRLLACLSSPPSHC 50 (80)
Q Consensus 36 ~GrllA~IsSRPGQ~ 50 (80)
+++|+|+||++|-.+
T Consensus 87 ~~kLvgfIs~~P~~i 101 (165)
T d1iyka1 87 TGKLVAFIAATPVTF 101 (165)
T ss_dssp TCCEEEEEEEEEEEE
T ss_pred CCcEEEEEecceEEE
Confidence 688999999999744
No 12
>d1pn0a2 c.47.1.10 (A:462-662) Phenol hydroxylase, C-terminal domain {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}
Probab=21.89 E-value=13 Score=24.36 Aligned_cols=19 Identities=47% Similarity=0.847 Sum_probs=13.5
Q ss_pred cccchh-----hh--HHHHHHHHHHH
Q 037906 52 RADGYI-----LE--KELEFYIKNIQ 70 (80)
Q Consensus 52 raDGyI-----LE--kELeFY~kk~~ 70 (80)
|+|||| |+ ++|+=|...+-
T Consensus 158 RPDgyVg~v~~Ldd~~~L~~yF~~fl 183 (201)
T d1pn0a2 158 RPDGYTSLVTDLEGTAEIDRYFSGIL 183 (201)
T ss_dssp CTTSBEEEEECTTTHHHHHHHHHTTB
T ss_pred CCCcceEEEEccccHHHHHHHHHHhh
Confidence 667776 66 88888877554
No 13
>d1ii5a_ c.94.1.1 (A:) Glutamate receptor ligand binding core {Synechocystis sp., GluR0 [TaxId: 1143]}
Probab=21.16 E-value=16 Score=21.71 Aligned_cols=20 Identities=10% Similarity=0.345 Sum_probs=16.7
Q ss_pred cccccchhhh-HHHHHHHHHH
Q 037906 50 CGRADGYILE-KELEFYIKNI 69 (80)
Q Consensus 50 ~GraDGyILE-kELeFY~kk~ 69 (80)
.||+|++|.. -.+.+|++..
T Consensus 153 ~g~~d~~~~~~~~~~~~~~~~ 173 (226)
T d1ii5a_ 153 KKQVEAVMFDRPALIYYTRQN 173 (226)
T ss_dssp TTSCSEEEEEHHHHHHHHHHC
T ss_pred CCCeeeEeccchhHHHHHhhc
Confidence 3999999998 8899988764
No 14
>d1rbli_ d.73.1.1 (I:) Ribulose 1,5-bisphosphate carboxylase-oxygenase {Synechococcus sp., strain pcc 6301 [TaxId: 1131]}
Probab=20.80 E-value=21 Score=22.06 Aligned_cols=15 Identities=7% Similarity=0.124 Sum_probs=12.4
Q ss_pred hcCceeEEeecCCCc
Q 037906 35 ASGRLLACLSSPPSH 49 (80)
Q Consensus 35 ~~GrllA~IsSRPGQ 49 (80)
.+-+.++.|..||||
T Consensus 95 ~q~r~~~fIV~RP~~ 109 (109)
T d1rbli_ 95 KECQTSSFIVHRPGR 109 (109)
T ss_dssp TTEEEEEEEEECCCC
T ss_pred CCEEEEEEEEeCCCC
Confidence 455788999999997
No 15
>d1nn6a_ b.47.1.2 (A:) Chymase (mast cell protease I) {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.29 E-value=31 Score=20.46 Aligned_cols=33 Identities=15% Similarity=0.153 Sum_probs=23.6
Q ss_pred cCceeEEeecCCCccccccchhhhHHHHHHHHHHHh
Q 037906 36 SGRLLACLSSPPSHCGRADGYILEKELEFYIKNIQR 71 (80)
Q Consensus 36 ~GrllA~IsSRPGQ~GraDGyILEkELeFY~kk~~~ 71 (80)
.+.|++.+|--++.++.++.|. -+.-|..+|+.
T Consensus 187 ~~~l~GI~s~g~~~~~~p~vyt---~v~~y~~WI~~ 219 (224)
T d1nn6a_ 187 AGVAQGIVSYGRSDAKPPAVFT---RISHYRPWINQ 219 (224)
T ss_dssp TTEEEEEEEECCTTCCSCEEEE---EHHHHHHHHHH
T ss_pred CCEEEEEEEECCCCCCCCeEEE---EHHHHHHHHHH
Confidence 5789999887888888888885 34445555543
Done!