BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037907
(265 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5I0I2|MARH2_RAT E3 ubiquitin-protein ligase MARCH2 OS=Rattus norvegicus GN=March2
PE=1 SV=1
Length = 246
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E N+ +PC C GTL H+ C+++W + CE+C+ F+
Sbjct: 64 CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q99M02|MARH2_MOUSE E3 ubiquitin-protein ligase MARCH2 OS=Mus musculus GN=March2 PE=2
SV=1
Length = 246
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 29/51 (56%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E N+ +PC C GTL H+ C+++W + CE+C+ F+
Sbjct: 64 CRICHEGANGENLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q32L65|MARH2_BOVIN E3 ubiquitin-protein ligase MARCH2 OS=Bos taurus GN=MARCH2 PE=2
SV=1
Length = 245
Score = 51.2 bits (121), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 30/51 (58%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E ++ +PC C+GTL H+ C++RW + CE+C+ F+
Sbjct: 64 CRICHEGANGESLLSPCGCSGTLGAVHKSCLERWLSSSNTSYCELCHTEFA 114
>sp|Q80TE3|MARH4_MOUSE E3 ubiquitin-protein ligase MARCH4 OS=Mus musculus GN=March4 PE=2
SV=3
Length = 409
Score = 50.8 bits (120), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 2/69 (2%)
Query: 56 CKNGGEGCSSSSAAALMGMVE--CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNK 113
CK E C S ++ GM CRIC + E + +PC C+G++K H+ C+ +W ++
Sbjct: 139 CKEKTEDCYSLGSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISE 198
Query: 114 KGDITCEIC 122
+G +CE+C
Sbjct: 199 RGCWSCELC 207
>sp|Q68FA7|MARH3_XENTR E3 ubiquitin-protein ligase MARCH3 OS=Xenopus tropicalis GN=march3
PE=2 SV=1
Length = 251
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E ++ +PC C GTL HR C++ W + CE+C+ FS
Sbjct: 69 CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFS 119
>sp|Q0IH10|MARH3_XENLA E3 ubiquitin-protein ligase MARCH3 OS=Xenopus laevis GN=march3 PE=2
SV=1
Length = 252
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E ++ +PC C GTL HR C++ W + CE+C+ FS
Sbjct: 70 CRICHEGSTQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFS 120
>sp|Q8TCQ1|MARH1_HUMAN E3 ubiquitin-protein ligase MARCH1 OS=Homo sapiens GN=MARCH1 PE=1
SV=1
Length = 289
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 77 CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNYSLPPA 135
CRIC E DE + PC C GTL+F H+ C+ +W CE+C F L P
Sbjct: 80 CRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKPL 139
Query: 136 R 136
R
Sbjct: 140 R 140
>sp|Q6NZQ8|MARH1_MOUSE E3 ubiquitin-protein ligase MARCH1 OS=Mus musculus GN=March1 PE=1
SV=2
Length = 289
Score = 50.4 bits (119), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 48/121 (39%), Gaps = 5/121 (4%)
Query: 21 RPLESQAQAQTQTQNATLN--SVNVVVSEQEERSNKDCKNGGEGCSSSSAAALMGMVE-- 76
R E+ +Q +TLN S S S G S S ++ +
Sbjct: 20 RTPETSGDVADASQTSTLNEKSPGRSASRSSNISKASSPTTGTAPRSQSRLSVCPSTQDI 79
Query: 77 CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNYSLPPA 135
CRIC E DE + PC C GTL+F H+ C+ +W CE+C F L P
Sbjct: 80 CRICHCEGDEESPLITPCRCTGTLRFVHQSCLHQWIKSSDTRCCELCKYDFIMETKLKPL 139
Query: 136 R 136
R
Sbjct: 140 R 140
>sp|Q3TZ87|MARH9_MOUSE E3 ubiquitin-protein ligase MARCH9 OS=Mus musculus GN=March9 PE=2
SV=1
Length = 348
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 76 ECRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEIC 122
+CRIC + E + +PC C+G+++ H+ C+ RW +++G +CE+C
Sbjct: 109 QCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELC 155
>sp|Q86YJ5|MARH9_HUMAN E3 ubiquitin-protein ligase MARCH9 OS=Homo sapiens GN=MARCH9 PE=1
SV=2
Length = 346
Score = 50.1 bits (118), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 17/47 (36%), Positives = 32/47 (68%)
Query: 76 ECRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEIC 122
+CRIC + E + +PC C+G+++ H+ C+ RW +++G +CE+C
Sbjct: 109 QCRICFQGPEQGELLSPCRCDGSVRCTHQPCLIRWISERGSWSCELC 155
>sp|O60337|MARH6_HUMAN E3 ubiquitin-protein ligase MARCH6 OS=Homo sapiens GN=MARCH6 PE=1
SV=2
Length = 910
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 77 CRICQEEDEVHN-MEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQ--IFSPNYS-- 131
CR+C+ E + PC C G++KF H++C+ +W CE+C F+P YS
Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPD 68
Query: 132 LPPARSNSDVMA 143
+P D+ A
Sbjct: 69 MPSRLPIQDIFA 80
>sp|Q5R9W1|MARH6_PONAB E3 ubiquitin-protein ligase MARCH6 OS=Pongo abelii GN=MARCH6 PE=2
SV=1
Length = 910
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 77 CRICQEEDEVHN-MEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQ--IFSPNYS-- 131
CR+C+ E + PC C G++KF H++C+ +W CE+C F+P YS
Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPD 68
Query: 132 LPPARSNSDVMA 143
+P D+ A
Sbjct: 69 MPSRLPIQDIFA 80
>sp|Q6ZQ89|MARH6_MOUSE E3 ubiquitin-protein ligase MARCH6 OS=Mus musculus GN=March6 PE=2
SV=2
Length = 909
Score = 49.7 bits (117), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 36/72 (50%), Gaps = 5/72 (6%)
Query: 77 CRICQEEDEVHN-MEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQ--IFSPNYS-- 131
CR+C+ E + PC C G++KF H++C+ +W CE+C F+P YS
Sbjct: 9 CRVCRSEGTPEKPLYHPCVCTGSIKFIHQECLVQWLKHSRKEYCELCKHRFAFTPIYSPD 68
Query: 132 LPPARSNSDVMA 143
+P D+ A
Sbjct: 69 MPSRLPIQDIFA 80
>sp|Q8BRX9|MARH3_MOUSE E3 ubiquitin-protein ligase MARCH3 OS=Mus musculus GN=March3 PE=2
SV=1
Length = 218
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E ++ +PC C GTL HR C++ W + CE+C+ F+
Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121
>sp|Q86UD3|MARH3_HUMAN E3 ubiquitin-protein ligase MARCH3 OS=Homo sapiens GN=MARCH3 PE=2
SV=1
Length = 253
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E ++ +PC C GTL HR C++ W + CE+C+ F+
Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121
>sp|Q5XIE5|MARH3_RAT E3 ubiquitin-protein ligase MARCH3 OS=Rattus norvegicus GN=March3
PE=1 SV=1
Length = 253
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E ++ +PC C GTL HR C++ W + CE+C+ F+
Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121
>sp|A0JN69|MARH3_BOVIN E3 ubiquitin-protein ligase MARCH3 OS=Bos taurus GN=MARCH3 PE=2
SV=1
Length = 253
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E ++ +PC C GTL HR C++ W + CE+C+ F+
Sbjct: 71 CRICHEGSSQEDLLSPCECTGTLGTIHRSCLEHWLSSSNTSYCELCHFRFA 121
>sp|Q0VD59|MARH8_BOVIN E3 ubiquitin-protein ligase MARCH8 OS=Bos taurus GN=MARCH8 PE=2
SV=1
Length = 289
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 51/126 (40%), Gaps = 22/126 (17%)
Query: 33 TQNATLNSVNVVVSEQEERSNKDCKNGGEGCSSSSAAALMGMVE---------------- 76
+Q+AT V ++++ER ++ K G S SS + G
Sbjct: 13 SQDATSARVYRSKTKEKEREEQNEKTLGHSMSHSSNISKAGGSSVASAPVSSFPRTSVTP 72
Query: 77 -----CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNY 130
CRIC E D+ + PC C G+L F H+ C+Q+W CE+C F
Sbjct: 73 SNQDICRICHCEGDDESPLITPCRCTGSLHFVHQTCLQQWIKSSDTRCCELCKYEFIMET 132
Query: 131 SLPPAR 136
L P R
Sbjct: 133 KLKPLR 138
>sp|Q1LVZ2|MARH2_DANRE E3 ubiquitin-protein ligase MARCH2 OS=Danio rerio GN=march2 PE=2
SV=1
Length = 249
Score = 49.3 bits (116), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 77 CRICQEEDEVHNME---APCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E +V N E +PC C GTL H+ C+++W + CE+C+ F+
Sbjct: 64 CRICHEGQDVCNSEGLLSPCDCTGTLGTVHKSCLEKWLSSSNTSYCELCHTEFT 117
>sp|Q5PQ35|MARH2_XENLA E3 ubiquitin-protein ligase MARCH2 OS=Xenopus laevis GN=march2 PE=2
SV=1
Length = 246
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E + +PC C GTL H+ C+++W + CE+C+ F+
Sbjct: 64 CRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q9DBD2|MARH8_MOUSE E3 ubiquitin-protein ligase MARCH8 OS=Mus musculus GN=March8 PE=2
SV=1
Length = 286
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 77 CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNYSLPPA 135
CRIC E D+ + PC C G+L F H+ C+Q+W CE+C F L P
Sbjct: 76 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLKPL 135
Query: 136 R 136
R
Sbjct: 136 R 136
>sp|Q28EX7|MARH2_XENTR E3 ubiquitin-protein ligase MARCH2 OS=Xenopus tropicalis GN=march2
PE=2 SV=1
Length = 246
Score = 48.9 bits (115), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E + +PC C GTL H+ C+++W + CE+C+ F+
Sbjct: 64 CRICHEGGNGERLLSPCDCTGTLGTVHKTCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q5T0T0|MARH8_HUMAN E3 ubiquitin-protein ligase MARCH8 OS=Homo sapiens GN=MARCH8 PE=1
SV=1
Length = 291
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 77 CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNYSLPPA 135
CRIC E D+ + PC C G+L F H+ C+Q+W CE+C F L P
Sbjct: 80 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKYEFIMETKLKPL 139
Query: 136 R 136
R
Sbjct: 140 R 140
>sp|A6P320|MARHB_RAT E3 ubiquitin-protein ligase MARCH11 OS=Rattus norvegicus GN=March11
PE=1 SV=1
Length = 398
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEIC 122
C+IC + E + PC C+G++++ H+ C+ +W +++G TCE+C
Sbjct: 166 CKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELC 211
>sp|Q8CBH7|MARHB_MOUSE E3 ubiquitin-protein ligase MARCH11 OS=Mus musculus GN=March11 PE=2
SV=2
Length = 400
Score = 48.1 bits (113), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEIC 122
C+IC + E + PC C+G++++ H+ C+ +W +++G TCE+C
Sbjct: 168 CKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELC 213
>sp|A6NNE9|MARHB_HUMAN E3 ubiquitin-protein ligase MARCH11 OS=Homo sapiens GN=MARCH11 PE=2
SV=3
Length = 402
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 31/46 (67%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEIC 122
C+IC + E + PC C+G++++ H+ C+ +W +++G TCE+C
Sbjct: 170 CKICFQGAEQGELLNPCRCDGSVRYTHQLCLLKWISERGSWTCELC 215
>sp|Q28IK8|MARH8_XENTR E3 ubiquitin-protein ligase MARCH8 OS=Xenopus tropicalis GN=march8
PE=2 SV=1
Length = 264
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 77 CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNYSLPPA 135
CRIC E D+ + PC C G+L F H+ C+Q+W CE+C F L P
Sbjct: 53 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEFIMETKLKPL 112
Query: 136 R 136
R
Sbjct: 113 R 113
>sp|Q9P0N8|MARH2_HUMAN E3 ubiquitin-protein ligase MARCH2 OS=Homo sapiens GN=MARCH2 PE=1
SV=1
Length = 246
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 28/51 (54%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
CRIC E + +PC C GTL H+ C+++W + CE+C+ F+
Sbjct: 64 CRICHEGANGECLLSPCGCTGTLGAVHKSCLEKWLSSSNTSYCELCHTEFA 114
>sp|Q5XH39|MARH8_XENLA E3 ubiquitin-protein ligase MARCH8 OS=Xenopus laevis GN=march8 PE=2
SV=2
Length = 264
Score = 48.1 bits (113), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Query: 77 CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNYSLPPA 135
CRIC E D+ + PC C G+L F H+ C+Q+W CE+C F L P
Sbjct: 53 CRICHCEGDDESPLITPCHCTGSLHFVHQACLQQWIKSSDTRCCELCKFEFIMETKLKPL 112
Query: 136 R 136
R
Sbjct: 113 R 113
>sp|Q9P2E8|MARH4_HUMAN E3 ubiquitin-protein ligase MARCH4 OS=Homo sapiens GN=MARCH4 PE=2
SV=2
Length = 410
Score = 47.4 bits (111), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/58 (34%), Positives = 35/58 (60%)
Query: 65 SSSAAALMGMVECRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEIC 122
SS + M CRIC + E + +PC C+G++K H+ C+ +W +++G +CE+C
Sbjct: 151 GSSLDSGMRTPLCRICFQGPEQGELLSPCRCDGSVKCTHQPCLIKWISERGCWSCELC 208
>sp|Q0P496|MARH4_DANRE E3 ubiquitin-protein ligase MARCH4 OS=Danio rerio GN=march4 PE=2
SV=1
Length = 421
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 30/46 (65%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEIC 122
CRIC + E + +PC C+G+++ H C+ +W +++G +CE+C
Sbjct: 143 CRICFQGPEQGELLSPCRCSGSVRCTHEPCLIKWISERGSWSCELC 188
>sp|P40318|DOA10_YEAST ERAD-associated E3 ubiquitin-protein ligase DOA10 OS=Saccharomyces
cerevisiae (strain ATCC 204508 / S288c) GN=SSM4 PE=1
SV=1
Length = 1319
Score = 45.4 bits (106), Expect = 5e-04, Method: Composition-based stats.
Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 9/56 (16%)
Query: 77 CRICQ-EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK--------GDITCEICN 123
CRIC+ E E + + PC C G++K+ H C+ W K D+ C+IC+
Sbjct: 39 CRICRGEATEDNPLFHPCKCRGSIKYMHESCLLEWVASKNIDISKPGADVKCDICH 94
>sp|Q5XIV2|MARHA_RAT Probable E3 ubiquitin-protein ligase MARCH10 OS=Rattus norvegicus
GN=March10 PE=2 SV=1
Length = 790
Score = 42.0 bits (97), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 77 CRICQ--EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK----GDI----TCEICNQ 124
CRICQ + + PC C G+L+F H++C+++W K D+ TCE+C Q
Sbjct: 641 CRICQIAGGSPANPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLSTVKTCEMCKQ 698
>sp|O60103|DOA10_SCHPO ERAD-associated E3 ubiquitin-protein ligase doa10
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=doa10 PE=1 SV=1
Length = 1242
Score = 41.2 bits (95), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 77 CRICQEEDEVHN-MEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIF 126
CR+C+ E + + PC C G++++ H++C+ W CE+C F
Sbjct: 8 CRVCRCEGAPDSPLFHPCKCTGSIRYVHQECLVEWLGHSKKTHCELCKAKF 58
>sp|Q6NYK8|MARH5_DANRE E3 ubiquitin-protein ligase MARCH5 OS=Danio rerio GN=march5 PE=2
SV=1
Length = 289
Score = 40.8 bits (94), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 27/53 (50%), Gaps = 6/53 (11%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK------GDITCEICN 123
C ++ED +PC C G K+ H+ C+QRW ++K G ++C C
Sbjct: 15 CFATEKEDRAAEWVSPCRCKGCTKWIHQSCLQRWLDEKQKGNSGGAVSCPQCG 67
>sp|Q6GM44|MARH5_XENLA E3 ubiquitin-protein ligase MARCH5 OS=Xenopus laevis GN=march5 PE=2
SV=1
Length = 283
Score = 40.4 bits (93), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 14/80 (17%)
Query: 64 SSSSAAALMGMVE--CRIC---QEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK---- 114
S S++ ++ M++ C +C E+D PC C G+ K+ H+ C+QRW ++K
Sbjct: 2 SESNSVSVQQMLDRSCWVCFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGN 61
Query: 115 --GDITCEICNQ---IFSPN 129
+ C CN I PN
Sbjct: 62 STARVACPQCNAEYLIVFPN 81
>sp|Q8NA82|MARHA_HUMAN Probable E3 ubiquitin-protein ligase MARCH10 OS=Homo sapiens
GN=MARCH10 PE=2 SV=3
Length = 808
Score = 40.4 bits (93), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 32/58 (55%), Gaps = 10/58 (17%)
Query: 77 CRICQ--EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK----GDI----TCEICNQ 124
CRICQ + + PC C G+L+F H++C+++W K D+ TCE+C Q
Sbjct: 659 CRICQIAGGSPSNPLLEPCGCVGSLQFVHQECLKKWLKVKITSGADLGAVKTCEMCKQ 716
>sp|Q5ZJ41|MARH5_CHICK E3 ubiquitin-protein ligase MARCH5 OS=Gallus gallus GN=MARCH5 PE=2
SV=1
Length = 281
Score = 40.0 bits (92), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK------GDITCEICN 123
C E+D PC C G+ K+ H+ C+QRW ++K + C CN
Sbjct: 20 CFATDEDDRTAEWVRPCRCRGSTKWVHQTCLQRWVDEKQRGNSTARVACPQCN 72
>sp|Q5XI50|MARH7_RAT E3 ubiquitin-protein ligase MARCH7 OS=Rattus norvegicus GN=March7
PE=2 SV=1
Length = 692
Score = 39.7 bits (91), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 77 CRICQ--EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGD--------ITCEICNQ 124
CRICQ + + PC C G+L++ H++C+++W K + TCE+C +
Sbjct: 553 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKE 610
>sp|Q3KNM2|MARH5_MOUSE E3 ubiquitin-protein ligase MARCH5 OS=Mus musculus GN=March5 PE=2
SV=1
Length = 278
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK------GDITCEICN 123
C E+D PC C G+ K+ H+ C+QRW ++K + C CN
Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCN 69
>sp|Q9NX47|MARH5_HUMAN E3 ubiquitin-protein ligase MARCH5 OS=Homo sapiens GN=MARCH5 PE=1
SV=1
Length = 278
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK------GDITCEICN 123
C E+D PC C G+ K+ H+ C+QRW ++K + C CN
Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCN 69
>sp|Q0X0A5|MARH5_CHLAE E3 ubiquitin-protein ligase MARCH5 OS=Chlorocebus aethiops
GN=MARCH5 PE=2 SV=1
Length = 278
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK------GDITCEICN 123
C E+D PC C G+ K+ H+ C+QRW ++K + C CN
Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCN 69
>sp|Q3ZC24|MARH5_BOVIN E3 ubiquitin-protein ligase MARCH5 OS=Bos taurus GN=MARCH5 PE=2
SV=1
Length = 278
Score = 39.7 bits (91), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 17/53 (32%), Positives = 25/53 (47%), Gaps = 6/53 (11%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKK------GDITCEICN 123
C E+D PC C G+ K+ H+ C+QRW ++K + C CN
Sbjct: 17 CFATDEDDRTAEWVRPCRCRGSTKWVHQACLQRWVDEKQRGNSTARVACPQCN 69
>sp|Q9WV66|MARH7_MOUSE E3 ubiquitin-protein ligase MARCH7 OS=Mus musculus GN=March7 PE=2
SV=1
Length = 693
Score = 39.7 bits (91), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 31/58 (53%), Gaps = 10/58 (17%)
Query: 77 CRICQ--EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGD--------ITCEICNQ 124
CRICQ + + PC C G+L++ H++C+++W K + TCE+C +
Sbjct: 554 CRICQMAAASSSNLLIEPCKCTGSLQYVHQECMKKWLQAKINSGSSLEAVTTCELCKE 611
>sp|Q5R9W2|MARH7_PONAB E3 ubiquitin-protein ligase MARCH7 OS=Pongo abelii GN=MARCH7 PE=2
SV=1
Length = 707
Score = 38.9 bits (89), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 77 CRICQ--EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGD--------ITCEICNQ 124
CRICQ + + PC C G+L++ H+ C+++W K + TCE+C +
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKE 609
>sp|Q9H992|MARH7_HUMAN E3 ubiquitin-protein ligase MARCH7 OS=Homo sapiens GN=MARCH7 PE=1
SV=1
Length = 704
Score = 38.9 bits (89), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 18/58 (31%), Positives = 30/58 (51%), Gaps = 10/58 (17%)
Query: 77 CRICQ--EEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGD--------ITCEICNQ 124
CRICQ + + PC C G+L++ H+ C+++W K + TCE+C +
Sbjct: 552 CRICQMAAASSSNLLIEPCKCTGSLQYVHQDCMKKWLQAKINSGSSLEAVTTCELCKE 609
>sp|P90489|MIR2_HHV8P E3 ubiquitin-protein ligase MIR2 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K5 PE=1 SV=1
Length = 256
Score = 38.9 bits (89), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 7/53 (13%)
Query: 77 CRICQEE---DEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIF 126
C IC+EE + +H PCAC G L H +C+ W + C++C I+
Sbjct: 15 CWICREEVGNEGIH----PCACTGELDVVHPQCLSTWLTVSRNTACQMCRVIY 63
>sp|P90495|MIR1_HHV8P E3 ubiquitin-protein ligase MIR1 OS=Human herpesvirus 8 type P
(isolate GK18) GN=K3 PE=1 SV=1
Length = 333
Score = 38.5 bits (88), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)
Query: 77 CRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
C IC EE A C C G L+ HR C+ W + C+IC +++
Sbjct: 9 CWICNEELGNERFRA-CGCTGELENVHRSCLSTWLTISRNTACQICGVVYN 58
>sp|P27426|VIE1_BHV4D Probable E3 ubiquitin-protein ligase IE1 OS=Bovine herpesvirus 4
(strain DN-599) GN=IE1 PE=3 SV=1
Length = 285
Score = 36.6 bits (83), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 16/62 (25%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Query: 76 ECRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFSPNYSLPPA 135
+C IC++ + + C C G L++ H +C++ W + G+ C+ C + N L
Sbjct: 131 QCWICRDGESLPEARY-CNCYGDLQYCHEECLKTWISMSGEKKCKFCQTPYKVNRQLSLK 189
Query: 136 RS 137
R
Sbjct: 190 RG 191
>sp|Q91T40|LAP_LSDV E3 ubiquitin-protein ligase LAP OS=Lumpy skin disease virus
GN=LW010 PE=3 SV=1
Length = 162
Score = 36.2 bits (82), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 16/52 (30%), Positives = 25/52 (48%), Gaps = 2/52 (3%)
Query: 76 ECRICQEEDEVHNMEAPCACNGTLKFAHRKCIQRWCNKKGDITCEICNQIFS 127
C IC++E V C C K H+ C++ W N + C+ICN ++
Sbjct: 10 HCWICKDEYNVS--TNFCNCKNEFKIVHKNCLEEWINFSHNTKCKICNGKYN 59
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.324 0.132 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,912,808
Number of Sequences: 539616
Number of extensions: 3139987
Number of successful extensions: 9687
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 59
Number of HSP's successfully gapped in prelim test: 21
Number of HSP's that attempted gapping in prelim test: 9623
Number of HSP's gapped (non-prelim): 83
length of query: 265
length of database: 191,569,459
effective HSP length: 115
effective length of query: 150
effective length of database: 129,513,619
effective search space: 19427042850
effective search space used: 19427042850
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 60 (27.7 bits)