BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 037910
(235 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|297735532|emb|CBI18026.3| unnamed protein product [Vitis vinifera]
Length = 322
Score = 124 bits (310), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 102/172 (59%), Gaps = 21/172 (12%)
Query: 57 SKKFKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQ-PPKQEQDRKTASAVEIKCSDATR 115
+K KA T +KR +++ F +KKP S PPK IKC+DA R
Sbjct: 104 AKAEKASKVETVEKRVENVDERKQFSSVKKPPQASNGPPKL--------TAMIKCNDALR 155
Query: 116 TLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-----------P 164
+RE LAEA KVA E +E + K++V ACDP+ VAVSVESV+F+ M
Sbjct: 156 DKVRELLAEALFKVASEADE-DIKDEVNACDPIRVAVSVESVMFEKMGRSNGTQKFKYRS 214
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KDP NPD RKVLLGEVKP+ L+ PEEMAS++RQ N QI+E AL
Sbjct: 215 IMFNIKDPNNPDLRRKVLLGEVKPDRLINMSPEEMASNQRQRENSQIKEKAL 266
>gi|225439709|ref|XP_002272768.1| PREDICTED: transcription elongation factor A protein 3 [Vitis
vinifera]
Length = 367
Score = 123 bits (308), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 71/143 (49%), Positives = 88/143 (61%), Gaps = 20/143 (13%)
Query: 85 KKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRA 144
K P + PPK IKC+DA R +RE LAEA KVA E +E + K++V A
Sbjct: 178 KPPQASNGPPKL--------TAMIKCNDALRDKVRELLAEALFKVASEADE-DIKDEVNA 228
Query: 145 CDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVT 193
CDP+ VAVSVESV+F+ M +FN+KDP NPD RKVLLGEVKP+ L+
Sbjct: 229 CDPIRVAVSVESVMFEKMGRSNGTQKFKYRSIMFNIKDPNNPDLRRKVLLGEVKPDRLIN 288
Query: 194 ALPEEMASDERQSRNKQIREDAL 216
PEEMAS++RQ N QI+E AL
Sbjct: 289 MSPEEMASNQRQRENSQIKEKAL 311
>gi|224087871|ref|XP_002308256.1| predicted protein [Populus trichocarpa]
gi|222854232|gb|EEE91779.1| predicted protein [Populus trichocarpa]
Length = 352
Score = 119 bits (298), Expect = 1e-24, Method: Compositional matrix adjust.
Identities = 64/120 (53%), Positives = 83/120 (69%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
+KC+DA R IRE LAEA SKVA E +E + +++V ACDP+ VAVSVES++F+ +
Sbjct: 178 VKCNDALRDKIRELLAEALSKVASEADE-DIRDEVEACDPIRVAVSVESMMFEKLGRSNG 236
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPDF RKVLLGEV+PE LVT PEEMAS++R+ N QI+E L
Sbjct: 237 AQKLKYRSIMFNIKDQNNPDFRRKVLLGEVQPERLVTMGPEEMASEQRKRENNQIKEKVL 296
>gi|255575598|ref|XP_002528699.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223531871|gb|EEF33688.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 342
Score = 117 bits (292), Expect = 5e-24, Method: Compositional matrix adjust.
Identities = 74/162 (45%), Positives = 91/162 (56%), Gaps = 20/162 (12%)
Query: 66 RTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEA 125
RT K K E Q A K PPK +A+ +KC+DA R IRE L EA
Sbjct: 134 RTVKVEKKSEEKQQAIDVKKPSQASVTPPK-------LTAI-VKCNDALRDKIRELLVEA 185
Query: 126 FSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKN 174
SKV E E + ++++ CDP+ VAVSVES +F+ M +FN+KDP N
Sbjct: 186 LSKVVSEANE-DGRDEISKCDPIRVAVSVESAMFEKMGRSNGAQKFKYRSIMFNLKDPNN 244
Query: 175 PDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
PD RKVLLGEVKPE L++ PEEMAS ERQ QI+E AL
Sbjct: 245 PDLRRKVLLGEVKPERLISMTPEEMASKERQEEINQIKEKAL 286
>gi|224139382|ref|XP_002323085.1| predicted protein [Populus trichocarpa]
gi|222867715|gb|EEF04846.1| predicted protein [Populus trichocarpa]
Length = 334
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 62/120 (51%), Positives = 82/120 (68%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
+KC+DA R IRE LAEA SKVA E +E + +++V ACDP+ VAVSVES +F+ +
Sbjct: 160 VKCNDALRDKIRELLAEALSKVASEADE-DIRDEVEACDPIRVAVSVESAMFEKLGRSNG 218
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPD RKVLLG+V+P+ LVT PEEMAS++R+ N QI+E AL
Sbjct: 219 AQKMKYRSIMFNIKDQNNPDLRRKVLLGQVQPQRLVTMPPEEMASEQRKRENNQIKEKAL 278
>gi|255559741|ref|XP_002520890.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223540021|gb|EEF41599.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 330
Score = 114 bits (285), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 62/119 (52%), Positives = 79/119 (66%), Gaps = 12/119 (10%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP---- 164
KC+D +R IRE+L EA KV+ E E E +++V ACD +GVAV+VES LF N P
Sbjct: 157 KCNDPSRDNIREQLYEALCKVSSEANE-EIQKEVNACDAIGVAVAVESALFSNWGPSNGS 215
Query: 165 -------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN +D KNPDF RKVLLG+VKPE + EEMASDER+ +NK+I+E AL
Sbjct: 216 DRIKYRSLIFNTRDAKNPDFRRKVLLGQVKPERIAELSSEEMASDERRKKNKEIKEKAL 274
>gi|224286619|gb|ACN41014.1| unknown [Picea sitchensis]
Length = 328
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 78/120 (65%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
IKC+DA R IRE + EAFSKV E E E ++ ACDPV VAV+VE+++F+ +
Sbjct: 154 IKCNDAVRDKIREIIYEAFSKVVNEAEG-ENMVRINACDPVRVAVTVETLMFEKLGRSNG 212
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPD R+VLLGE+KPE L+ EEMASD+R+ NKQI++ AL
Sbjct: 213 AQKLKYRSIIFNLKDANNPDLRRRVLLGEIKPEKLIVMTAEEMASDQRKLENKQIKDKAL 272
>gi|116789178|gb|ABK25146.1| unknown [Picea sitchensis]
Length = 331
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/175 (42%), Positives = 93/175 (53%), Gaps = 23/175 (13%)
Query: 53 VSVESKKFKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKCSD 112
V VE K S + KK K E E + K + PPK IKC+D
Sbjct: 113 VKVEVNASKGESVKVEKKPKVETESIGS---KKASSSSNGPPKLTS--------MIKCND 161
Query: 113 ATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC--------- 163
A R RE L EAFSKV E E E +V ACDPV +AVSVE+V+F+ +
Sbjct: 162 ALRDKFREILYEAFSKVVNEAEG-EDLARVNACDPVRIAVSVETVMFEKLGRSNGAQKFK 220
Query: 164 --PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPD R+VLLG++KPE L+ EEMASD R+ NKQI++ AL
Sbjct: 221 YRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMASDNRKLENKQIKDKAL 275
>gi|224137638|ref|XP_002322607.1| predicted protein [Populus trichocarpa]
gi|222867237|gb|EEF04368.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 108 bits (270), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/170 (43%), Positives = 96/170 (56%), Gaps = 32/170 (18%)
Query: 60 FKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIR 119
FK PS+ KR + E+ F KKP S+ P +KCSD R+ +R
Sbjct: 169 FKKPST----KRITQQENVKDFCSFKKP---SEEP-------------VKCSDGLRSKVR 208
Query: 120 ERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF-----------LFN 168
L E+ +VA EV+E + E VR DP+ VA VES++F+ M F LFN
Sbjct: 209 HILVESLCRVAKEVKE-DLMEAVRLRDPIIVAADVESLMFERMGLFNGTKQLKYRSILFN 267
Query: 169 VKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
+KDPKNPD RKVLLG++KPE LVT EEMAS++RQ N QIR+ +L K
Sbjct: 268 MKDPKNPDLRRKVLLGQIKPEKLVTMTAEEMASNQRQFENDQIRKKSLWK 317
>gi|449499153|ref|XP_004160740.1| PREDICTED: transcription elongation factor A protein 2-like
[Cucumis sativus]
Length = 290
Score = 107 bits (268), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 21/144 (14%)
Query: 85 KKPL-GQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVR 143
KKP G + PPK IK DA R IRE L EAFSKV GE +E E ++V
Sbjct: 100 KKPSSGAAAPPKLTS--------MIKSKDAARDKIRELLFEAFSKVPGEADE-EFMDEVN 150
Query: 144 ACDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLV 192
A DP+ VAVSVESV+F+N +FN+KDPKNPDF RKVLLG +KPE ++
Sbjct: 151 ASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMI 210
Query: 193 TALPEEMASDERQSRNKQIREDAL 216
+MASD+R+ N++I + AL
Sbjct: 211 NMSTADMASDQRKRENEEIAQKAL 234
>gi|449441244|ref|XP_004138392.1| PREDICTED: transcription elongation factor A protein 3-like
[Cucumis sativus]
Length = 369
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/144 (47%), Positives = 86/144 (59%), Gaps = 21/144 (14%)
Query: 85 KKPL-GQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVR 143
KKP G + PPK IK DA R IRE L EAFSKV GE +E E ++V
Sbjct: 179 KKPSSGAAAPPKLTS--------MIKSKDAARDKIRELLFEAFSKVPGEADE-EFMDEVN 229
Query: 144 ACDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLV 192
A DP+ VAVSVESV+F+N +FN+KDPKNPDF RKVLLG +KPE ++
Sbjct: 230 ASDPIRVAVSVESVMFENWGGSTGAQKAKYRSIMFNLKDPKNPDFRRKVLLGLIKPERMI 289
Query: 193 TALPEEMASDERQSRNKQIREDAL 216
+MASD+R+ N++I + AL
Sbjct: 290 NMSTADMASDQRKRENEEIAQKAL 313
>gi|224094063|ref|XP_002334806.1| predicted protein [Populus trichocarpa]
gi|222875111|gb|EEF12242.1| predicted protein [Populus trichocarpa]
Length = 333
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 73/170 (42%), Positives = 96/170 (56%), Gaps = 32/170 (18%)
Query: 60 FKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIR 119
FK PS+ KR + E+ F KKP S+ P +KCSD R+ +R
Sbjct: 169 FKKPST----KRITQQENVKDFCSFKKP---SEEP-------------VKCSDGLRSKVR 208
Query: 120 ERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF-----------LFN 168
L E+ +VA EV+E + E VR DP+ VA VES++F+ M F LFN
Sbjct: 209 HILVESLCRVAKEVKE-DLMEAVRLRDPIIVAADVESLMFERMGLFNGTKQLKYRSILFN 267
Query: 169 VKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
+KDPKNPD RK+LLG++KPE LVT EEMAS++RQ N QIR+ +L K
Sbjct: 268 MKDPKNPDLRRKLLLGQIKPEKLVTMTAEEMASNQRQFENDQIRKKSLWK 317
>gi|224086771|ref|XP_002307957.1| predicted protein [Populus trichocarpa]
gi|222853933|gb|EEE91480.1| predicted protein [Populus trichocarpa]
Length = 412
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 59/122 (48%), Positives = 75/122 (61%), Gaps = 12/122 (9%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF-- 165
+KC DA R +R L E+ ++VA E E ++ V + DP+ VA VESV+F+ M F
Sbjct: 275 VKCDDALRGKVRSILVESLTRVAKETEAGLRRA-VSSRDPICVAADVESVMFQKMGAFNG 333
Query: 166 ---------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
LFN+KDPKNPD RKVLLG++KPE LVT EEMAS+ RQ N QIR +L
Sbjct: 334 AKTVKYRSVLFNLKDPKNPDLRRKVLLGQIKPEKLVTMTSEEMASNHRQFENAQIRMKSL 393
Query: 217 AK 218
K
Sbjct: 394 LK 395
>gi|15224901|ref|NP_181390.1| transcript elongation factor IIS [Arabidopsis thaliana]
gi|3786016|gb|AAC67362.1| putative elongation factor [Arabidopsis thaliana]
gi|23297820|gb|AAN13033.1| putative elongation factor [Arabidopsis thaliana]
gi|26450199|dbj|BAC42218.1| putative elongation factor [Arabidopsis thaliana]
gi|330254456|gb|AEC09550.1| transcript elongation factor IIS [Arabidopsis thaliana]
Length = 378
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
+KC+D R IRE L EA +VAGE ++ E+ E V A DP+ VAVSVES++F+ +
Sbjct: 204 LKCNDPVRDKIRELLVEALCRVAGEADDYER-ESVNASDPLRVAVSVESLMFEKLGRSTG 262
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D NPD R+VL GE+ PE L+T E+MASD+R+ N QI+E AL
Sbjct: 263 AQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDKRKQENNQIKEKAL 322
>gi|297823741|ref|XP_002879753.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
gi|297325592|gb|EFH56012.1| transcription factor S-II domain-containing protein [Arabidopsis
lyrata subsp. lyrata]
Length = 378
Score = 103 bits (256), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
+KC+D R IRE L +A +VAGE ++ E+K V A DP+ VAVSVES++F+ +
Sbjct: 204 LKCNDPVRDKIRELLVDALCRVAGEADDYERK-SVNASDPLRVAVSVESLMFEKLGRSTG 262
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D NPD R+VL GE+ PE L+T EEMASD+R+ N QI+E AL
Sbjct: 263 AQKLKYRSIMFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQIKEKAL 322
>gi|357124260|ref|XP_003563821.1| PREDICTED: transcription elongation factor A protein 2-like
[Brachypodium distachyon]
Length = 364
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 78/126 (61%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
++C+DA R RE LAEAF KV+ E + +++E +V ACDP V+V+VES LF+
Sbjct: 183 VRCNDAARDKYRELLAEAFFKVSKETSKDDREEVRNLLDEVNACDPYRVSVTVESALFER 242
Query: 162 MC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ LFN+K NPDF R+VLLGEV+P LV P+EMASD R+ NKQ
Sbjct: 243 LGRSTGAHKAKYRSILFNLKADNNPDFRRRVLLGEVRPGRLVDISPDEMASDARKLENKQ 302
Query: 211 IREDAL 216
I+E AL
Sbjct: 303 IKEKAL 308
>gi|18377737|gb|AAL67018.1| putative elongation factor [Arabidopsis thaliana]
Length = 378
Score = 102 bits (255), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 55/120 (45%), Positives = 76/120 (63%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
+KC+D R IRE L EA +VAGE ++ E+ E V A DP+ VAVSVES++F+ +
Sbjct: 204 LKCNDPVRDKIRELLMEALCRVAGEADDYER-ESVNASDPLRVAVSVESLMFEKLGRSTG 262
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D NPD R+VL GE+ PE L+T E+MASD+R+ N QI+E AL
Sbjct: 263 AQKLKYRSIMFNLRDSNNPDLRRRVLTGEISPEKLITLSAEDMASDKRKQENNQIKEKAL 322
>gi|312283193|dbj|BAJ34462.1| unnamed protein product [Thellungiella halophila]
Length = 381
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
+KC+D R IRE L EA S+V GE +E ++ E+V CDP VAVSVES +F+ +
Sbjct: 207 LKCNDPVRDKIREMLVEALSRVHGESDEYDR-EKVNGCDPFRVAVSVESHMFEKLGRSTG 265
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D NPD R+VL GEV PE L+T EEMASD+R+ N QI+E L
Sbjct: 266 AEKAKYRSIMFNLRDSNNPDLRRRVLTGEVPPEKLITLSAEEMASDKRKQENNQIKEKFL 325
>gi|37718881|gb|AAR01752.1| putative transcription elongation factor, 5'-partial [Oryza sativa
Japonica Group]
Length = 315
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 79/126 (62%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LA+AFS+V GE + +++E +V A DP VAV+VES LF+
Sbjct: 134 VKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVESALFER 193
Query: 162 MC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ +FN++ N DF R+VLLG+V+PE LV PEEMASD R+ NKQ
Sbjct: 194 LGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASDARKLENKQ 253
Query: 211 IREDAL 216
I+E AL
Sbjct: 254 IKEKAL 259
>gi|115456173|ref|NP_001051687.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|28876018|gb|AAO60027.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|108711747|gb|ABF99542.1| transcription elongation factor S-II family protein, expressed
[Oryza sativa Japonica Group]
gi|113550158|dbj|BAF13601.1| Os03g0815900 [Oryza sativa Japonica Group]
gi|125546195|gb|EAY92334.1| hypothetical protein OsI_14059 [Oryza sativa Indica Group]
gi|125588382|gb|EAZ29046.1| hypothetical protein OsJ_13099 [Oryza sativa Japonica Group]
Length = 367
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 59/126 (46%), Positives = 79/126 (62%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LA+AFS+V GE + +++E +V A DP VAV+VES LF+
Sbjct: 186 VKCNDPTRDKIRELLADAFSRVHGETSKDDREEVRNILDEVDARDPFRVAVTVESALFER 245
Query: 162 MC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ +FN++ N DF R+VLLG+V+PE LV PEEMASD R+ NKQ
Sbjct: 246 LGRSTGAHKAKYRSIMFNLRADNNTDFRRRVLLGQVRPERLVDISPEEMASDARKLENKQ 305
Query: 211 IREDAL 216
I+E AL
Sbjct: 306 IKEKAL 311
>gi|388514187|gb|AFK45155.1| unknown [Medicago truncatula]
Length = 369
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 56/120 (46%), Positives = 77/120 (64%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP--- 164
IK +D+ R IRE L +A +KV E +E + ++V ACDP+ VAV+VESVLF+N P
Sbjct: 195 IKSNDSARDKIRELLRDALAKVFEEADE-DMMDEVNACDPIRVAVTVESVLFENWGPSNG 253
Query: 165 --------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD KNPDF RKVLLG V+P+ L EMAS++R+ N++I + AL
Sbjct: 254 AQKVKYRSLMFNLKDQKNPDFRRKVLLGTVEPQRLAVMSSAEMASEQRKQENEKIEQKAL 313
>gi|356509090|ref|XP_003523285.1| PREDICTED: putative transcription elongation factor S-II-like
[Glycine max]
Length = 368
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP--- 164
IK +DATR IRE L EA SKV GE +E + + V DP+ VAV+VESVLF+ P
Sbjct: 194 IKSNDATRDKIREILHEALSKVTGEADE-DLVDVVNNSDPIRVAVTVESVLFEKWGPSNG 252
Query: 165 --------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPDF RKVLLG ++PE L+ EMAS++R+ ++I E AL
Sbjct: 253 AQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQRKQEYQKITEKAL 312
>gi|255637690|gb|ACU19168.1| unknown [Glycine max]
Length = 368
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 74/120 (61%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP--- 164
IK +DATR IRE L EA SKV GE +E + + V DP+ VAV+VESVLF+ P
Sbjct: 194 IKSNDATRDKIREILHEALSKVTGEADE-DLVDVVNNSDPIRVAVTVESVLFEKWGPSNG 252
Query: 165 --------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPDF RKVLLG ++PE L+ EMAS++R+ ++I E AL
Sbjct: 253 AQKVKYRSLMFNLKDSNNPDFRRKVLLGVIEPEQLINMSTAEMASEQRKQEYQKITEKAL 312
>gi|115471257|ref|NP_001059227.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|113610763|dbj|BAF21141.1| Os07g0229700 [Oryza sativa Japonica Group]
gi|215737106|dbj|BAG96035.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 379
Score = 97.1 bits (240), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC DA+R IR L +AFS+V+ E + +++E +V+ACDP +AV VE LF+
Sbjct: 198 VKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVECALFQK 257
Query: 162 MCPF-----------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ F +FN+KD N DF R+VLLG+V+PE + P EMASD R+ NK+
Sbjct: 258 LGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASDTRKLENKK 317
Query: 211 IREDAL 216
I E AL
Sbjct: 318 IEEKAL 323
>gi|23617251|dbj|BAC20918.1| putative transcription elongation factor [Oryza sativa Japonica
Group]
gi|125599607|gb|EAZ39183.1| hypothetical protein OsJ_23609 [Oryza sativa Japonica Group]
Length = 373
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC DA+R IR L +AFS+V+ E + +++E +V+ACDP +AV VE LF+
Sbjct: 192 VKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVKACDPFRIAVMVECALFQK 251
Query: 162 MCPF-----------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ F +FN+KD N DF R+VLLG+V+PE + P EMASD R+ NK+
Sbjct: 252 LGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASDTRKLENKK 311
Query: 211 IREDAL 216
I E AL
Sbjct: 312 IEEKAL 317
>gi|242032519|ref|XP_002463654.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
gi|241917508|gb|EER90652.1| hypothetical protein SORBIDRAFT_01g003660 [Sorghum bicolor]
Length = 368
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 57/126 (45%), Positives = 74/126 (58%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LAEAF+KV+ E ++ E +V ACDP VAV VES LF+
Sbjct: 187 VKCNDPTRDKIRELLAEAFAKVSRETSNDDRDEVRNILDEVDACDPYRVAVKVESALFER 246
Query: 162 MC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ +FN++ N DF R+VL+GEV PE L P+EMASD R+ N Q
Sbjct: 247 LGRSTGAHKTKYRSIMFNLRAENNTDFRRRVLIGEVTPEGLPDISPDEMASDARKQENMQ 306
Query: 211 IREDAL 216
I+E AL
Sbjct: 307 IKEKAL 312
>gi|195622302|gb|ACG32981.1| transcription elongation factor A protein 2 [Zea mays]
gi|223947497|gb|ACN27832.1| unknown [Zea mays]
gi|413932648|gb|AFW67199.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LAEAF V+ E + ++ E +V ACDP VAV+VES LF+
Sbjct: 187 VKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFER 246
Query: 162 MCP-----------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ P +FN++ N DF R+VL+G V PE L P+EMASD R+ N Q
Sbjct: 247 LGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASDARKQENMQ 306
Query: 211 IREDAL 216
I+E AL
Sbjct: 307 IKEKAL 312
>gi|125557745|gb|EAZ03281.1| hypothetical protein OsI_25427 [Oryza sativa Indica Group]
Length = 373
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 54/126 (42%), Positives = 76/126 (60%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC DA+R IR L +AFS+V+ E + +++E +V+ACDP +AV VE LF+
Sbjct: 192 VKCGDASRDRIRAILGDAFSRVSEETRKDDREEVRNIIEEVQACDPFRIAVMVECPLFQK 251
Query: 162 MCPF-----------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ F +FN+KD N DF R+VLLG+V+PE + P EMASD R+ NK+
Sbjct: 252 LGNFNGPNKQRYRSLMFNLKDDHNTDFRRRVLLGQVQPERIADLTPTEMASDTRKLENKK 311
Query: 211 IREDAL 216
I E AL
Sbjct: 312 IEEKAL 317
>gi|413932649|gb|AFW67200.1| hypothetical protein ZEAMMB73_561219 [Zea mays]
Length = 246
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 74/126 (58%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LAEAF V+ E + ++ E +V ACDP VAV+VES LF+
Sbjct: 65 VKCNDPTRDKIRELLAEAFVSVSRETSDDDRDEVKNILDEVEACDPYRVAVTVESALFER 124
Query: 162 MCP-----------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ P +FN++ N DF R+VL+G V PE L P+EMASD R+ N Q
Sbjct: 125 LGPSTGTHRAKYRSIMFNLRAENNTDFRRRVLIGLVAPERLPDIPPDEMASDARKQENMQ 184
Query: 211 IREDAL 216
I+E AL
Sbjct: 185 IKEKAL 190
>gi|414873584|tpg|DAA52141.1| TPA: hypothetical protein ZEAMMB73_289702 [Zea mays]
Length = 318
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 73/126 (57%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LAEAF+KV E ++ E +V ACDP VAV+VES LF+
Sbjct: 137 VKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFER 196
Query: 162 MC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+FN++ N DF R+VL+G+V PE L P+EMASD R+ N Q
Sbjct: 197 FGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASDARKQENLQ 256
Query: 211 IREDAL 216
I+E AL
Sbjct: 257 IKEKAL 262
>gi|226498648|ref|NP_001142260.1| uncharacterized protein LOC100274429 [Zea mays]
gi|194688540|gb|ACF78354.1| unknown [Zea mays]
gi|194707892|gb|ACF88030.1| unknown [Zea mays]
Length = 367
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 73/126 (57%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LAEAF+KV E ++ E +V ACDP VAV+VES LF+
Sbjct: 186 VKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFER 245
Query: 162 MC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+FN++ N DF R+VL+G+V PE L P+EMASD R+ N Q
Sbjct: 246 FGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASDARKQENLQ 305
Query: 211 IREDAL 216
I+E AL
Sbjct: 306 IKEKAL 311
>gi|194708758|gb|ACF88463.1| unknown [Zea mays]
Length = 376
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 56/126 (44%), Positives = 73/126 (57%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LAEAF+KV E ++ E +V ACDP VAV+VES LF+
Sbjct: 186 VKCNDPTRDKIRELLAEAFAKVPRETSNDDRDEVRNILDEVDACDPFRVAVTVESALFER 245
Query: 162 MC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+FN++ N DF R+VL+G+V PE L P+EMASD R+ N Q
Sbjct: 246 FGRSTGAHKAKYRSIMFNLRAENNTDFRRRVLIGQVTPERLPDISPDEMASDARKQENLQ 305
Query: 211 IREDAL 216
I+E AL
Sbjct: 306 IKEKAL 311
>gi|255641093|gb|ACU20825.1| unknown [Glycine max]
Length = 350
Score = 93.2 bits (230), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 72/120 (60%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP--- 164
IK SDATR I+E L EA SKV E +E + V DP+ VAV+VESVLF+ P
Sbjct: 193 IKSSDATRDKIKEILHEALSKVTREADE-DLVAVVNDSDPIRVAVTVESVLFEKWGPSNG 251
Query: 165 --------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPDF RKVLLG V+PE L+ EMAS++R+ ++I E AL
Sbjct: 252 AQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQRKQEYQKITEKAL 311
>gi|356516223|ref|XP_003526795.1| PREDICTED: transcription elongation factor A protein 2-like
[Glycine max]
Length = 367
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 57/120 (47%), Positives = 72/120 (60%), Gaps = 12/120 (10%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP--- 164
IK +DATR IRE L EA SKV E +E + V DP+ VAV+VESVLF+ P
Sbjct: 193 IKSNDATRDKIREILHEALSKVTREADE-DLVAVVNDSDPIRVAVTVESVLFEKWGPSNG 251
Query: 165 --------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPDF RKVLLG V+PE L+ EMAS++R+ ++I E AL
Sbjct: 252 AQKVKYRSLMFNLKDSNNPDFRRKVLLGVVEPEQLINMSTAEMASEQRKQEYQKITEKAL 311
>gi|226504526|ref|NP_001149284.1| transcription elongation factor A protein 2 [Zea mays]
gi|195626030|gb|ACG34845.1| transcription elongation factor A protein 2 [Zea mays]
Length = 368
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 55/126 (43%), Positives = 74/126 (58%), Gaps = 17/126 (13%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKE------QVRACDPVGVAVSVESVLFKN 161
+KC+D TR IRE LAEAF +V+ E + ++ E +V A DP VAV+VES LF+
Sbjct: 187 VKCNDPTRDKIRELLAEAFVRVSRETSDDDRDEVRNILDEVEARDPYRVAVTVESALFER 246
Query: 162 MCP-----------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ P +FN++ N DF R+VL+G V PE L P+EMASD R+ N Q
Sbjct: 247 LGPSTGTHRAKYRSIMFNLRAESNTDFRRRVLIGLVAPERLPDVSPDEMASDARKQENMQ 306
Query: 211 IREDAL 216
I+E AL
Sbjct: 307 IKEKAL 312
>gi|147860975|emb|CAN82941.1| hypothetical protein VITISV_013128 [Vitis vinifera]
Length = 326
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 55/108 (50%), Positives = 66/108 (61%), Gaps = 16/108 (14%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFN 168
KC+DA R +RE L+EA SKV GE +E + + V ACDP+ VAV F
Sbjct: 164 KCNDALRDKVRELLSEALSKVVGEADE-DIMDAVNACDPIRVAV------FSG------- 209
Query: 169 VKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
D KNPD RKVLLG+V PE L+ PEEMASD RQ N+QI+E AL
Sbjct: 210 --DAKNPDLRRKVLLGQVMPERLLEMGPEEMASDRRQLENQQIKEKAL 255
>gi|383138603|gb|AFG50480.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138604|gb|AFG50481.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138605|gb|AFG50482.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138606|gb|AFG50483.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138607|gb|AFG50484.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138608|gb|AFG50485.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138609|gb|AFG50486.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138610|gb|AFG50487.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138611|gb|AFG50488.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138612|gb|AFG50489.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138613|gb|AFG50490.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138614|gb|AFG50491.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138615|gb|AFG50492.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138616|gb|AFG50493.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138617|gb|AFG50494.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138618|gb|AFG50495.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
gi|383138619|gb|AFG50496.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 51/104 (49%), Positives = 64/104 (61%), Gaps = 12/104 (11%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
IKC+DA R RE L EA SKVA E E E +V ACDPV +AVSVE+V+F+ +
Sbjct: 35 IKCNDALRDKFREILYEALSKVASEAEG-EDLARVNACDPVRIAVSVETVMFEKLGRSNG 93
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMA 200
+FN+KD NPD R+VLLG++KPE L+ EEMA
Sbjct: 94 AQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|361067733|gb|AEW08178.1| Pinus taeda anonymous locus 2_2293_01 genomic sequence
Length = 137
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 63/104 (60%), Gaps = 12/104 (11%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---- 163
IKC+DA R RE L EA SKV E E E +V ACDPV +AVSVE+V+F+ +
Sbjct: 35 IKCNDALRDKFREILYEALSKVVSEAEG-EDLARVNACDPVRIAVSVETVMFEKLGRSNG 93
Query: 164 -------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMA 200
+FN+KD NPD R+VLLG++KPE L+ EEMA
Sbjct: 94 AQKFKYRSIMFNLKDGNNPDLRRRVLLGQIKPEKLIVMTAEEMA 137
>gi|302757165|ref|XP_002962006.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
gi|302775328|ref|XP_002971081.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300161063|gb|EFJ27679.1| hypothetical protein SELMODRAFT_441410 [Selaginella moellendorffii]
gi|300170665|gb|EFJ37266.1| hypothetical protein SELMODRAFT_437865 [Selaginella moellendorffii]
Length = 303
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 53/119 (44%), Positives = 70/119 (58%), Gaps = 12/119 (10%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNM------ 162
K +DATR +RE L EAF KV E E E + A DPV VAV VE+ LF +
Sbjct: 130 KSNDATRDKMREVLLEAFQKVPQEAEGQEL-ARANAKDPVQVAVEVENALFSKLESTKVD 188
Query: 163 -----CPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KDP NPD R++LLG++ L T E+MASD+R++ NKQI++ AL
Sbjct: 189 KKAKYRSIVFNLKDPNNPDLRRRLLLGQISGSQLTTMSAEDMASDQRKAENKQIKDKAL 247
>gi|168033194|ref|XP_001769101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162679630|gb|EDQ66075.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 67/119 (56%), Gaps = 12/119 (10%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC----- 163
K D+TR RE L EAF K EV + E V+ D V VAV+VES LF +
Sbjct: 202 KAGDSTRDRFREFLIEAFKKCCSEVTD-EHLAMVKKTDLVRVAVAVESALFSKLGQSKGS 260
Query: 164 ------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPDF R++L+GE+KPE + ++MASD R+ N+ IRE AL
Sbjct: 261 EKAKYRSIMFNLKDQNNPDFRRRILIGEIKPEEIANMTADDMASDARKKENESIREKAL 319
>gi|255567202|ref|XP_002524582.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536135|gb|EEF37790.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 337
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 56/156 (35%), Positives = 85/156 (54%), Gaps = 20/156 (12%)
Query: 86 KPLGQSQPPKQEQDRKTASAVEI-KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRA 144
K + ++Q PK + A I K S++ R IRE++++A S V E K + ++
Sbjct: 143 KKVSRTQTPKILTPHPHSKAASIPKSSNSLRESIREQISQALSMVFNEA----KHDTLKT 198
Query: 145 CDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVT 193
CDP+ +A S+ES LF LFN+KDPKNPDF RK+L+GE+K E +
Sbjct: 199 CDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEIKAEEVAE 258
Query: 194 ALPEEMASDERQSRNKQIREDALAKIRDHSVVGEKE 229
+MASDE Q +N+ I+ +L K +VG ++
Sbjct: 259 MDAGQMASDEMQRKNQGIQAKSLWKC----IVGREQ 290
>gi|15227992|ref|NP_181801.1| F-box protein [Arabidopsis thaliana]
gi|4512680|gb|AAD21734.1| hypothetical protein [Arabidopsis thaliana]
gi|330255067|gb|AEC10161.1| F-box protein [Arabidopsis thaliana]
Length = 737
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 69/118 (58%), Gaps = 11/118 (9%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF--- 165
K D+ R +RE L + KVA E+ + E K +V ACDP VAVSVES +F+ + F
Sbjct: 601 KTGDSKRDKVREILQTSLVKVASEIVDTEMKTRVTACDPSVVAVSVESAMFEKLGCFMGP 660
Query: 166 --------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
LFN+ D NPD RKVL+GE+ E LVT +EM S++ Q ++I+E+A
Sbjct: 661 HKAKYRSILFNMGDSNNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQRIKENA 718
>gi|15233998|ref|NP_193607.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|4539391|emb|CAB37457.1| putative protein [Arabidopsis thaliana]
gi|7268666|emb|CAB78874.1| putative protein [Arabidopsis thaliana]
gi|332658681|gb|AEE84081.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 266
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 60/104 (57%), Gaps = 11/104 (10%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF--- 165
K D+ R +RE L + +KVA EV + E K +V ACDP VAVSVE+ +F+N+ F
Sbjct: 112 KTGDSKRDKVREILQTSLAKVASEVVDTEMKTRVTACDPWVVAVSVETAMFENLGCFMGP 171
Query: 166 --------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMAS 201
LFN+ D NPD RKVLLGE+ E LV EEM S
Sbjct: 172 QKAKYRSILFNMGDSNNPDLRRKVLLGEISGERLVKMEKEEMGS 215
>gi|168041433|ref|XP_001773196.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675555|gb|EDQ62049.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 353
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 49/119 (41%), Positives = 68/119 (57%), Gaps = 12/119 (10%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF--- 165
K D R RE L +AF K E+ + E + V++ D V V ++VE+VLF + F
Sbjct: 180 KSGDPNRDRFRELLLDAFKKCCSELTD-EHSKIVKSTDFVKVTLAVETVLFSKLGLFNGK 238
Query: 166 --------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
LFN+KD NPDF R+VL+GE+K E +V ++MASD R+ N+ IRE AL
Sbjct: 239 EKAKYRSILFNLKDQNNPDFRRRVLMGEIKSEEIVNMTADDMASDARKKENEVIREKAL 297
>gi|297827973|ref|XP_002881869.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
gi|297327708|gb|EFH58128.1| hypothetical protein ARALYDRAFT_483368 [Arabidopsis lyrata subsp.
lyrata]
Length = 225
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 64/107 (59%), Gaps = 11/107 (10%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFN 168
K D+ R +RE L + +KVA EV + E K +V ACDP VA+SVES +F++
Sbjct: 111 KTGDSKRDKVREILQTSLAKVATEVVDTEMKTRVTACDPWVVAISVESAMFES------- 163
Query: 169 VKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
NPD RKVL+GE+ E LVT +EM S++ Q ++I+E+A
Sbjct: 164 ----NNPDLRRKVLIGEINGERLVTMERQEMGSEKIQKEVQRIKENA 206
>gi|255567144|ref|XP_002524553.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223536106|gb|EEF37761.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 152
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 54/92 (58%), Gaps = 11/92 (11%)
Query: 138 KKEQVRACDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEV 186
K + ++ CDP+ +A S+ES LF LFN+KDPKNPDF RK+L+GE+
Sbjct: 7 KHDTLKTCDPIQIAASLESALFVKWGVSNTRSRTKYRSLLFNIKDPKNPDFRRKILVGEI 66
Query: 187 KPETLVTALPEEMASDERQSRNKQIREDALAK 218
K E + +MASDE Q +N+ I+ +L K
Sbjct: 67 KAEEVAEMDAGQMASDEMQRKNQGIQAKSLWK 98
>gi|22327517|ref|NP_680377.1| Transcription factor IIS protein [Arabidopsis thaliana]
gi|332007413|gb|AED94796.1| Transcription factor IIS protein [Arabidopsis thaliana]
Length = 233
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQV-RACDPVGVAVSVESVLFKNMCPFLF 167
K D+ R + E L + +KVA EV + E K +V CDP VAVSVES + LF
Sbjct: 111 KTGDSKRDKVHEILQSSLAKVATEVVDTEMKRRVMTVCDPWVVAVSVESAM-----SILF 165
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
N+ D NPD RKVL+GE+ E LV +EM S++ Q ++I+E A
Sbjct: 166 NMGDSNNPDLRRKVLIGEISGERLVKMEKDEMGSEKIQKEVQRIKERA 213
>gi|297823711|ref|XP_002879738.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
gi|297325577|gb|EFH55997.1| hypothetical protein ARALYDRAFT_903050 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 28/51 (54%), Positives = 37/51 (72%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D NPD R+VL GE+ PE L+T EEMASD+R+ N QI+E AL
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNQIKEKAL 51
>gi|297788910|ref|XP_002862485.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
gi|297308027|gb|EFH38743.1| hypothetical protein ARALYDRAFT_920656 [Arabidopsis lyrata subsp.
lyrata]
Length = 107
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/51 (52%), Positives = 36/51 (70%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D NPD R+VL GE+ PE L+T EEMASD+R+ N I+E AL
Sbjct: 1 MFNLRDGNNPDLRRRVLTGEISPEKLITLSAEEMASDKRKQENNHIKEKAL 51
>gi|303290875|ref|XP_003064724.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453750|gb|EEH51058.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 325
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 54/116 (46%), Gaps = 16/116 (13%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP------ 164
D R RE LAEA ++ G + E V A+++E+ +
Sbjct: 158 GDPLRDRTRELLAEAIAQAIGAPDVYASVEDV-----AQTAIAIENAMHAQWSDTGKEYK 212
Query: 165 -----FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
FN+KDPKNPD R V G + P L+ PEE+ SDER++ N +IRE A
Sbjct: 213 AKFRQLSFNLKDPKNPDLRRSVADGLISPAVLLDLSPEELGSDERRNSNAKIREHA 268
>gi|297736471|emb|CBI25342.3| unnamed protein product [Vitis vinifera]
Length = 302
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 9/85 (10%)
Query: 76 EDQAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEE 135
E+ A P +K PPK K C+DA R +RE L+EA SKV GE +E
Sbjct: 111 ENVKATPLLKPSHNIVGPPKLTSISK--------CNDALRDKVRELLSEALSKVVGEADE 162
Query: 136 MEKKEQVRACDPVGVAVSVESVLFK 160
+ + V ACDP+ VAVSVESV+F+
Sbjct: 163 -DIMDAVNACDPIRVAVSVESVMFE 186
>gi|384246149|gb|EIE19640.1| hypothetical protein COCSUDRAFT_25684 [Coccomyxa subellipsoidea
C-169]
Length = 127
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/53 (50%), Positives = 35/53 (66%)
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN+KD NPD R+VL GE+ + LV EE+ASD R+S N QIR+ AL
Sbjct: 18 SLIFNLKDANNPDLRRRVLSGEITGDVLVNLSAEELASDARKSENAQIRKTAL 70
>gi|159474128|ref|XP_001695181.1| predicted protein [Chlamydomonas reinhardtii]
gi|158276115|gb|EDP01889.1| predicted protein [Chlamydomonas reinhardtii]
Length = 348
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 66/150 (44%), Gaps = 29/150 (19%)
Query: 89 GQSQPPKQEQDRKTASAVEI---KCSDATRTLIRERLAEAFS-KVAGEVEEMEKKEQVRA 144
G SQ Q ++S + +C + TR +R LAEA + G + Q
Sbjct: 143 GSSQQLLTRQPSASSSGFSVDPPRCGNETRDKVRSMLAEALAVGYVGGGDTGPSSLQ--- 199
Query: 145 CDPVGVAVSVESVLFKNMC---------------------PFLFNVKDPKNPDFWRKVLL 183
P + ++E L+ M FN+KD KNPD +VL
Sbjct: 200 -SPNQLGAAIEEALYDLMGGGGGGGGGREAVSAEYKAKARSLCFNLKDAKNPDLRERVLS 258
Query: 184 GEVKPETLVTALPEEMASDERQSRNKQIRE 213
G V PETLV EEMASDE++ +N++++E
Sbjct: 259 GSVPPETLVRLSAEEMASDEQKKKNRELKE 288
>gi|302831355|ref|XP_002947243.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
gi|300267650|gb|EFJ51833.1| hypothetical protein VOLCADRAFT_116341 [Volvox carteri f.
nagariensis]
Length = 304
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 55/108 (50%), Gaps = 8/108 (7%)
Query: 109 KCSDATRTLIRERLAEAFS---KVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF 165
+C + TR +R LAEA + G V E E + G SV
Sbjct: 152 RCGNDTRDKVRVMLAEALAVGFNSGGAVIEDALHELL-----AGSGSSVSGEYKAKARSL 206
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRE 213
FN+KD KNPD +VL G + PE+LV EE+ASDE++ +N++++E
Sbjct: 207 CFNLKDAKNPDLRERVLSGSIPPESLVRMSAEELASDEQKRKNREMKE 254
>gi|255083388|ref|XP_002504680.1| predicted protein [Micromonas sp. RCC299]
gi|226519948|gb|ACO65938.1| predicted protein [Micromonas sp. RCC299]
Length = 114
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 40/63 (63%), Gaps = 4/63 (6%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVG 226
FN+KDPKNPD R V G + P+ L+ PEE+ SDER++ N IRE A A +V G
Sbjct: 10 FNLKDPKNPDLRRSVADGLISPKVLLDLKPEELGSDERRNENAAIREAATA----EAVRG 65
Query: 227 EKE 229
+K+
Sbjct: 66 QKQ 68
>gi|412992662|emb|CCO18642.1| predicted protein [Bathycoccus prasinos]
Length = 331
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALA 217
FN+KDPKNPD R + E+ TL+ EE+ SDER++ N+ IRE A A
Sbjct: 224 LAFNMKDPKNPDLRRAIAKREIDATTLIDLSSEELGSDERRAANQSIREHAEA 276
>gi|45549559|ref|NP_573049.2| CG8117 [Drosophila melanogaster]
gi|45446964|gb|AAF48482.2| CG8117 [Drosophila melanogaster]
gi|66571116|gb|AAY51523.1| IP08861p [Drosophila melanogaster]
gi|66772509|gb|AAY55566.1| IP09061p [Drosophila melanogaster]
gi|220943416|gb|ACL84251.1| CG8117-PA [synthetic construct]
gi|220953346|gb|ACL89216.1| CG8117-PA [synthetic construct]
Length = 162
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 50/94 (53%), Gaps = 11/94 (11%)
Query: 146 DPVGVAVSVESVLFKNM--CPF---------LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
DP +A +E ++ ++ C L N++DPKNP+ +K LLG++ PE L
Sbjct: 28 DPDDMAAKLEDAIYGDLNGCKVKYKNRIRSRLANLRDPKNPELRQKFLLGQITPEELSKM 87
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
PEEMASD+ + ++ +D++ + V G K
Sbjct: 88 TPEEMASDDMKQMRQKYVQDSINAAQMAKVQGTK 121
>gi|302833984|ref|XP_002948555.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
gi|300266242|gb|EFJ50430.1| hypothetical protein VOLCADRAFT_88764 [Volvox carteri f.
nagariensis]
Length = 1482
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 41/128 (32%), Positives = 61/128 (47%), Gaps = 15/128 (11%)
Query: 104 SAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFK--- 160
SA + D R+ +RE+LA A + E++ E + DP VA VE+ L+K
Sbjct: 397 SAGSVGNDDEVRSKVREQLASALQRALDELKAEGYTEALP--DPAAVAADVETELYKLHD 454
Query: 161 ---------NMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI 211
FN++D NP+ +VL GE+ P LVT P E+A E S +Q
Sbjct: 455 NSVSKDYKAKFRSLSFNLRDNGNPELRARVLRGELPPPRLVTLGPAELARKE-LSEWRQK 513
Query: 212 REDALAKI 219
R++ AK+
Sbjct: 514 RQEEAAKM 521
>gi|308808340|ref|XP_003081480.1| putative elongation factor (ISS) [Ostreococcus tauri]
gi|116059943|emb|CAL56002.1| putative elongation factor (ISS) [Ostreococcus tauri]
Length = 126
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 34/49 (69%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
FN++DPKNPD + +GE+ + L+ PEE+ S+ER+ N++IRE A
Sbjct: 21 FNMRDPKNPDLRTNLAMGEISADVLIDLTPEELGSNERRQANEKIREFA 69
>gi|3347834|gb|AAC64679.1| transcription elongation factor S-II [Xenopus laevis]
Length = 289
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP+ + VL G V P+++ T EEMASDE R+ RN +E IR+H +
Sbjct: 183 ISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQE----AIREHQM 238
Query: 225 V 225
Sbjct: 239 A 239
>gi|168012823|ref|XP_001759101.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689800|gb|EDQ76170.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 90
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FNVKD N DF R++LLG +KPE +V+ +MAS++R+ + I+ ++
Sbjct: 2 SIMFNVKDDTNLDFRRRILLGRIKPEAVVSMTFSDMASEQRKKETEGIKAKSM 54
>gi|147904545|ref|NP_001090166.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|10801727|dbj|BAB16755.1| transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP+ + VL G V P+++ T EEMASDE R+ RN + IRE +AK
Sbjct: 539 ISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQMAKT 597
>gi|213623950|gb|AAI70441.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP+ + VL G V P+++ T EEMASDE R+ RN + IRE +AK
Sbjct: 539 ISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQMAKT 597
>gi|3347836|gb|AAC64680.1| transcription elongation factor S-II [Xenopus laevis]
Length = 121
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 38/61 (62%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP+ + VL G V P+++ T EEMASDE R+ RN +E IR+H +
Sbjct: 15 ISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQE----AIREHQM 70
Query: 225 V 225
Sbjct: 71 A 71
>gi|213625366|gb|AAI70443.1| Transcription elongation factor XSII-K1 [Xenopus laevis]
Length = 645
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 38/59 (64%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP+ + VL G V P+++ T EEMASDE R+ RN + IRE +AK
Sbjct: 539 ISNLKDPKNPNLRKNVLCGVVTPQSIATMTAEEMASDELRELRNTMTQEAIREHQMAKT 597
>gi|395526680|ref|XP_003765486.1| PREDICTED: uncharacterized protein LOC100925432 [Sarcophilus
harrisii]
Length = 1362
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/161 (30%), Positives = 74/161 (45%), Gaps = 41/161 (25%)
Query: 82 PFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQ 141
P +KPL PP Q + SAV +D+ R ++ +RL E + GE E
Sbjct: 748 PPKEKPLPGPAPPLQLSGEQVRSAV----ADSLREVLLKRLQEPANLTVGE-------EA 796
Query: 142 VRACDPVGVAVSVESVLFKNM-C----------PFLFNVKDPKNPDFWRKVLLGEVKPET 190
VR G+A ++E+ +F M C +FN++DP+N D + +V+ G++ P+
Sbjct: 797 VR-----GIAANIEAAIFDLMQCTDYRYKTKYRSLVFNLRDPRNKDLFLQVIRGDITPQG 851
Query: 191 LVTALPEEMASDERQSRNKQIREDALAKIRDH--SVVGEKE 229
LV E+AS E LA+ RD S VG E
Sbjct: 852 LVRMSATELASQE------------LAQWRDRECSPVGPSE 880
>gi|225716628|gb|ACO14160.1| Transcription elongation factor A protein 1 [Esox lucius]
Length = 181
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 61/124 (49%), Gaps = 20/124 (16%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVL--FKNMCP---- 164
SD+ R RE L++A AG+ + CD +G + ES+ F+N P
Sbjct: 17 SDSVRMKCREMLSQALQ--AGDDYIAIGAD----CDELGAQIE-ESIFSEFQNTDPKYKN 69
Query: 165 ----FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNP+ R VL G V P+ + EEMASDE + K + ++A IR
Sbjct: 70 RVRSRIANLKDIKNPNLRRNVLCGNVAPDRMAKMTAEEMASDELKLIRKNLTKEA---IR 126
Query: 221 DHSV 224
DH V
Sbjct: 127 DHQV 130
>gi|391331678|ref|XP_003740270.1| PREDICTED: transcription elongation factor S-II-like [Metaseiulus
occidentalis]
Length = 288
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 64/147 (43%), Gaps = 24/147 (16%)
Query: 91 SQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGV 150
+ PP + K S +DA R RE L+ A K G + A DP +
Sbjct: 104 TTPPARPVPAKQTSFPAGNTTDAVRLKCREMLSNAL-KGNGLPDGC-------AADPDEL 155
Query: 151 AVSVESVLF-----------KNMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEM 199
A +ES F + + N+KDPKNP+ VL+G +KPE L EEM
Sbjct: 156 AERIESTCFDEFNNTDTKYRSRIRSRVANLKDPKNPNLRLGVLIGSIKPERLAKMTAEEM 215
Query: 200 ASDE-RQSRNKQIREDALAKIRDHSVV 225
ASDE +Q R K +E I DH +
Sbjct: 216 ASDELKQLRQKLTKE----AIDDHQMA 238
>gi|301620068|ref|XP_002939405.1| PREDICTED: transcription elongation factor A protein 3-like
[Xenopus (Silurana) tropicalis]
Length = 453
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP+ + VL G V P+ + T EEMASDE R+ RN + IRE +AK
Sbjct: 347 ISNLKDPKNPNLRKNVLCGVVTPQNIATMTAEEMASDELRELRNTMTQEAIREHQMAKT 405
>gi|301780656|ref|XP_002925744.1| PREDICTED: transcription elongation factor A protein 2-like
[Ailuropoda melanoleuca]
Length = 300
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 59/131 (45%), Gaps = 23/131 (17%)
Query: 106 VEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF 165
V + C DA R RE L A + ++ D G++ +E +F+++
Sbjct: 132 VPVTC-DAVRNKCREMLTAAL--------QTDRDHMAVGADCEGLSAQIEECIFRDVGNT 182
Query: 166 -----------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++
Sbjct: 183 DMKYRNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKE 242
Query: 215 ALAKIRDHSVV 225
A IR+H +
Sbjct: 243 A---IREHQMA 250
>gi|41053387|ref|NP_956288.1| transcription elongation factor A protein 1 [Danio rerio]
gi|31418820|gb|AAH53177.1| Transcription elongation factor A (SII), 1 [Danio rerio]
gi|182891554|gb|AAI64750.1| Tcea1 protein [Danio rerio]
Length = 309
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 61/130 (46%), Gaps = 14/130 (10%)
Query: 111 SDATRTLIRERLAEA------FSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC- 163
SD+ R RE L+ A + + + +E+ Q+ C + + + +KN
Sbjct: 145 SDSVRIKCREMLSNALQTGDDYITIGSDCDEL--GAQIEEC--IFLEFKNTDMKYKNRVR 200
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHS 223
+ N+KD KNP+ R VL G V P+ + EEMASDE + K + ++A IRDH
Sbjct: 201 SRISNLKDAKNPNLRRNVLCGNVSPDRIAKMTAEEMASDELKEMRKNLTKEA---IRDHQ 257
Query: 224 VVGEKELECD 233
V + D
Sbjct: 258 VATSGGTQTD 267
>gi|410953358|ref|XP_003983338.1| PREDICTED: transcription elongation factor A protein 2 [Felis
catus]
Length = 308
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 106 VEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF 165
V + C DA R RE L A + + D G++ +E +F+++
Sbjct: 140 VPVTC-DAVRNKCRELLTAAL--------QTDHDHMAVGADCEGLSAQIEECIFRDVGNT 190
Query: 166 -----------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++
Sbjct: 191 DMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE 250
Query: 215 ALAKIRDHSVV 225
A IR+H +
Sbjct: 251 A---IREHQMA 258
>gi|444729710|gb|ELW70117.1| Transcription elongation factor A protein 2 [Tupaia chinensis]
Length = 298
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/57 (43%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDH 222
+FN++D KNPD RKVL G + P+ + EEMASDE + K + +A IR H
Sbjct: 192 IFNLRDAKNPDLRRKVLRGVITPQQIAVMTAEEMASDEMKEIRKAMTREA---IRKH 245
>gi|355723561|gb|AES07931.1| transcription elongation factor A , 2 [Mustela putorius furo]
Length = 249
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 55/125 (44%), Gaps = 22/125 (17%)
Query: 112 DATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF------ 165
DA R RE LA A + D G++ +E +F+++
Sbjct: 111 DAVRNKCREMLAAAL--------RTDHDHMAVGADCEGLSAQIEECIFRDVGNTDMKYKN 162
Query: 166 -----LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 163 RVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 219
Query: 221 DHSVV 225
+H +
Sbjct: 220 EHQMA 224
>gi|432917903|ref|XP_004079557.1| PREDICTED: transcription elongation factor A protein 1-like
[Oryzias latipes]
Length = 300
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 14/122 (11%)
Query: 111 SDATRTLIRERLAEA------FSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC- 163
SD+ R RE LA A + + + EE+ Q+ C + + +KN
Sbjct: 131 SDSIRLKCREMLANALQTGEDYIAIGADCEEL--GAQIEEC--IFQEFKNTDMKYKNRVR 186
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHS 223
+ N+KD KNP+ R VL G V PE + EEMASDE + K + ++A +RDH
Sbjct: 187 SRISNLKDMKNPNLRRTVLCGSVSPERMAKMTAEEMASDELKEMRKNLTKEA---VRDHQ 243
Query: 224 VV 225
+
Sbjct: 244 MA 245
>gi|412991105|emb|CCO15950.1| predicted protein [Bathycoccus prasinos]
Length = 768
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/91 (34%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 144 ACDPVGVAVSVESVLFK------------NMCPFLFNVKDPKNPDFWRKVLLGEVKPETL 191
A +P +AV +E LF+ + +FN++DP+NP +VL V ETL
Sbjct: 141 ALNPSEIAVGIERALFERCGRDTGKEYGVHARSLMFNLRDPQNPTLRARVLHENVSAETL 200
Query: 192 VTALPEEMASDE----RQSRNKQIREDALAK 218
V P E+A+ E R+ R ++I EDA K
Sbjct: 201 VKMTPAELANKELIEWRKKREEKIGEDAFLK 231
>gi|395833391|ref|XP_003789720.1| PREDICTED: PHD finger protein 3 isoform 2 [Otolemur garnettii]
Length = 1953
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 899 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 958
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 959 EAERRPITKITHKGEIEIESDA 980
>gi|395833389|ref|XP_003789719.1| PREDICTED: PHD finger protein 3 isoform 1 [Otolemur garnettii]
Length = 2041
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 987 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1046
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1047 EAERRPITKITHKGEIEIESDA 1068
>gi|410959484|ref|XP_003986338.1| PREDICTED: PHD finger protein 3 [Felis catus]
Length = 2211
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 74/166 (44%), Gaps = 36/166 (21%)
Query: 92 QPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVA 151
PP + +A + + + ++ +RL E+ KV EE K VA
Sbjct: 1087 HPPATSTSKPSADQIRQSVRHSLKDILMKRLTESNLKVP---EEKAAK----------VA 1133
Query: 152 VSVESVLF----------KNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMA 200
+E LF KN +FN+KDPKN ++KVL GEV P+ L+ PEE+A
Sbjct: 1134 TKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELA 1193
Query: 201 SDE------RQSRN------KQIREDALAKIRDHSVVGEKELECDA 234
S E R++R+ K+ RE I + GE E+E DA
Sbjct: 1194 SKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDA 1239
>gi|348501107|ref|XP_003438112.1| PREDICTED: transcription elongation factor A protein 1-like
[Oreochromis niloticus]
Length = 311
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G V PE + EEMASDE + K + ++A +RDH +
Sbjct: 205 ISNLKDMKNPNLRRTVLCGSVTPERMAKMTAEEMASDELKEMRKNLTKEA---VRDHQMA 261
>gi|296481069|tpg|DAA23184.1| TPA: transcription elongation factor A protein 2 [Bos taurus]
Length = 286
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 29/134 (21%)
Query: 106 VEIKCSDATRTLIRERLAEAFSK-------------VAGEVEEMEKKEQVRACDPVGVAV 152
V + C DA RT RE L A +AG++EE ++ V
Sbjct: 132 VPVTC-DAVRTKCREMLTAALQTDHDHVAIGADCECLAGQIEECIFRD-----------V 179
Query: 153 SVESVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI 211
+ +KN L N+KD KNP RKVL G + P+ + EEMASDE + K +
Sbjct: 180 GNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAM 239
Query: 212 REDALAKIRDHSVV 225
++A IR+H +
Sbjct: 240 TKEA---IREHQMA 250
>gi|344264752|ref|XP_003404454.1| PREDICTED: PHD finger protein 3 [Loxodonta africana]
Length = 2047
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 987 LMFNLKDPKNSILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1046
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1047 EVERRPITKITHKGEIEIESDA 1068
>gi|229367280|gb|ACQ58620.1| Transcription elongation factor A protein 1 [Anoplopoma fimbria]
Length = 310
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/126 (34%), Positives = 59/126 (46%), Gaps = 22/126 (17%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLF----------K 160
SD+ R RE LA A AG+ + CD +G +E V+F K
Sbjct: 146 SDSIRIKCRELLANALQ--AGDDHIAIGAD----CDELGA--QIEEVIFQEFKNTDMKYK 197
Query: 161 NMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKI 219
N + N+KD KNP+ R VL G V PE + EEMASDE + K + ++A +
Sbjct: 198 NRVRSRISNLKDMKNPNLRRTVLCGSVTPERMAKMSAEEMASDELREMRKNLTKEA---V 254
Query: 220 RDHSVV 225
RDH +
Sbjct: 255 RDHQMA 260
>gi|145351408|ref|XP_001420072.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580305|gb|ABO98365.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 173
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 58/110 (52%), Gaps = 7/110 (6%)
Query: 111 SDATRTLIRERLAEAFSKVA--GEVEEMEKKEQVRACDPVGVAVSVE----SVLFKNMCP 164
+DA R RE A+A + G++E ++ K+ D + +++ + +K
Sbjct: 5 NDAARDRTREIFADALALCVTDGKIESVDAKKLASIVDQIENSMTAKWPSGGKDYKAKVR 64
Query: 165 FL-FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRE 213
L FN+KD KNPD + GE+ L+ PEE+ S+ER++ N++IRE
Sbjct: 65 QLAFNLKDAKNPDLRTNLATGEISAGVLIDLSPEELGSNERRNANERIRE 114
>gi|260826962|ref|XP_002608434.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
gi|229293785|gb|EEN64444.1| hypothetical protein BRAFLDRAFT_231981 [Branchiostoma floridae]
Length = 130
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 36/51 (70%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
N+KDP+NP+ R+++ GE+ P+ + T +EMASDE + +Q+ E+++ +
Sbjct: 22 NLKDPRNPELRRRLIQGEITPQQMATMSAQEMASDEVKKFRRQVSEESIQR 72
>gi|456753196|gb|JAA74119.1| PHD finger protein 3 [Sus scrofa]
Length = 2032
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 977 LMFNLKDPKNNILFKKVLRGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1036
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1037 EVERRPITKITHKGEIEIESDA 1058
>gi|359322715|ref|XP_537866.4| PREDICTED: uncharacterized protein LOC480747 [Canis lupus
familiaris]
Length = 592
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/131 (28%), Positives = 58/131 (44%), Gaps = 23/131 (17%)
Query: 106 VEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-- 163
V + C DA R RE L A + + D G++ +E +F+++
Sbjct: 424 VPVTC-DAVRNKCREMLTAAL--------QTDHDHMAVGADCEGLSAQIEECIFRDVGNT 474
Query: 164 ---------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++
Sbjct: 475 DMKYKNRVRSRISNLKDAKNPDLRRNVLCGVITPQQIAVMTSEEMASDELKEIRKAMTKE 534
Query: 215 ALAKIRDHSVV 225
A IR+H +
Sbjct: 535 A---IREHQMA 542
>gi|334324097|ref|XP_001372425.2| PREDICTED: PHD finger protein 3 [Monodelphis domestica]
Length = 2036
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 983 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1042
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1043 EVERRPITKITHKGEIEIESDA 1064
>gi|296198509|ref|XP_002746743.1| PREDICTED: PHD finger protein 3 isoform 2 [Callithrix jacchus]
Length = 1951
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 895 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 954
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 955 EVERRPITKITHKGEIEIESDA 976
>gi|395534413|ref|XP_003769236.1| PREDICTED: PHD finger protein 3 [Sarcophilus harrisii]
Length = 2029
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 975 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1034
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1035 EVERRPITKITHKGEIEIESDA 1056
>gi|115496660|ref|NP_001068797.1| transcription elongation factor A protein 2 [Bos taurus]
gi|122144556|sp|Q148K0.1|TCEA2_BOVIN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Transcription elongation factor S-II protein 2
gi|109939943|gb|AAI18233.1| Transcription elongation factor A (SII), 2 [Bos taurus]
Length = 300
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 29/134 (21%)
Query: 106 VEIKCSDATRTLIRERLAEAFSK-------------VAGEVEEMEKKEQVRACDPVGVAV 152
V + C DA RT RE L A +AG++EE ++ V
Sbjct: 132 VPVTC-DAVRTKCREMLTAALQTDHDHVAIGADCECLAGQIEECIFRD-----------V 179
Query: 153 SVESVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI 211
+ +KN L N+KD KNP RKVL G + P+ + EEMASDE + K +
Sbjct: 180 GNTDMKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAM 239
Query: 212 REDALAKIRDHSVV 225
++A IR+H +
Sbjct: 240 TKEA---IREHQMA 250
>gi|403268694|ref|XP_003926404.1| PREDICTED: PHD finger protein 3 isoform 2 [Saimiri boliviensis
boliviensis]
Length = 1951
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 895 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 954
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 955 EVERRPITKITHKGEIEIESDA 976
>gi|332862537|ref|XP_003317936.1| PREDICTED: PHD finger protein 3 isoform 2 [Pan troglodytes]
Length = 1951
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 896 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 955
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 956 EVERRPITKITHKGEIEIESDA 977
>gi|417406878|gb|JAA50079.1| Putative transcription factor datf1 [Desmodus rotundus]
Length = 2045
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 989 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1048
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1049 EVERRPITKITHKGEIEIESDA 1070
>gi|60219226|emb|CAI56715.1| hypothetical protein [Homo sapiens]
Length = 1951
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 896 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 955
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 956 EVERRPITKITHKGEIEIESDA 977
>gi|402867376|ref|XP_003897831.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3 [Papio anubis]
Length = 2165
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 1110 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1169
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1170 EVERRPITKITHKGEIEIESDA 1191
>gi|355711246|gb|AES03948.1| PHD finger protein 3 [Mustela putorius furo]
Length = 1987
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 932 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 991
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 992 EVERRPITKITHKGEIEIESDA 1013
>gi|301781204|ref|XP_002926018.1| PREDICTED: PHD finger protein 3-like [Ailuropoda melanoleuca]
Length = 2074
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 50/170 (29%), Positives = 76/170 (44%), Gaps = 36/170 (21%)
Query: 88 LGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDP 147
+ + PP + +A + + + ++ +RL ++ KV EE K
Sbjct: 943 MPNTHPPATSTSKPSADQIRQSVRHSLKDILMKRLTDSNLKVP---EEKAAK-------- 991
Query: 148 VGVAVSVESVLF----------KNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALP 196
VA +E LF KN +FN+KDPKN ++KVL GEV P+ L+ P
Sbjct: 992 --VATKIEKELFSFFRDTDAKYKNKYRSLMFNLKDPKNNILFKKVLKGEVTPDHLIRMSP 1049
Query: 197 EEMASDE------RQSRN------KQIREDALAKIRDHSVVGEKELECDA 234
EE+AS E R++R+ K+ RE I + GE E+E DA
Sbjct: 1050 EELASKELAAWRRRENRHTIEMIEKEQREVERRPITKITHKGEIEIESDA 1099
>gi|355762974|gb|EHH62098.1| hypothetical protein EGM_20299 [Macaca fascicularis]
Length = 2040
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 985 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1044
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1045 EVERRPITKITHKGEIEIESDA 1066
>gi|296198507|ref|XP_002746742.1| PREDICTED: PHD finger protein 3 isoform 1 [Callithrix jacchus]
Length = 2039
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 983 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1042
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1043 EVERRPITKITHKGEIEIESDA 1064
>gi|149732314|ref|XP_001503413.1| PREDICTED: PHD finger protein 3 isoform 1 [Equus caballus]
Length = 2042
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 989 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1048
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1049 EVERRPITKITHKGEIEIESDA 1070
>gi|149732316|ref|XP_001503414.1| PREDICTED: PHD finger protein 3 isoform 2 [Equus caballus]
Length = 1954
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 901 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 960
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 961 EVERRPITKITHKGEIEIESDA 982
>gi|73973196|ref|XP_538985.2| PREDICTED: PHD finger protein 3 isoform 1 [Canis lupus familiaris]
Length = 2043
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 986 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1045
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1046 EVERRPITKITHKGEIEIESDA 1067
>gi|26337609|dbj|BAC32490.1| unnamed protein product [Mus musculus]
Length = 371
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 254 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 313
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 314 EVERRPITKITHKGEIEIESDA 335
>gi|20521870|dbj|BAA13438.2| KIAA0244 [Homo sapiens]
Length = 2044
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 989 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1048
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1049 EVERRPITKITHKGEIEIESDA 1070
>gi|397521935|ref|XP_003831038.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pan
paniscus]
Length = 2054
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 999 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1058
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1059 EVERRPITKITHKGEIEIESDA 1080
>gi|281350870|gb|EFB26454.1| hypothetical protein PANDA_015611 [Ailuropoda melanoleuca]
Length = 2043
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 987 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1046
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1047 EVERRPITKITHKGEIEIESDA 1068
>gi|440911148|gb|ELR60861.1| PHD finger protein 3, partial [Bos grunniens mutus]
Length = 1943
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 895 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 954
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 955 EVERRPITKITHKGEIEIESDA 976
>gi|383417063|gb|AFH31745.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 985 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1044
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1045 EVERRPITKITHKGEIEIESDA 1066
>gi|380811170|gb|AFE77460.1| PHD finger protein 3 [Macaca mulatta]
Length = 2040
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 985 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1044
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1045 EVERRPITKITHKGEIEIESDA 1066
>gi|431838241|gb|ELK00173.1| PHD finger protein 3 [Pteropus alecto]
Length = 2121
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 1050 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1109
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1110 EVERRPITKITHKGEIEIESDA 1131
>gi|7662018|ref|NP_055968.1| PHD finger protein 3 [Homo sapiens]
gi|34098662|sp|Q92576.3|PHF3_HUMAN RecName: Full=PHD finger protein 3
gi|6648928|gb|AAF21292.1|AF091622_1 PHD finger protein 3 [Homo sapiens]
gi|109731109|gb|AAI13651.1| PHD finger protein 3 [Homo sapiens]
gi|109731774|gb|AAI13653.1| PHD finger protein 3 [Homo sapiens]
gi|119608902|gb|EAW88496.1| PHD finger protein 3 [Homo sapiens]
gi|126540985|emb|CAM45842.1| PHD finger protein 3 [Homo sapiens]
gi|168278551|dbj|BAG11155.1| PHD finger protein 3 [synthetic construct]
Length = 2039
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 984 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1043
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1044 EVERRPITKITHKGEIEIESDA 1065
>gi|395737392|ref|XP_002817084.2| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3, partial [Pongo
abelii]
Length = 2061
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 999 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1058
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1059 EVERRPITKITHKGEIEIESDA 1080
>gi|351711851|gb|EHB14770.1| PHD finger protein 3 [Heterocephalus glaber]
Length = 2028
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 973 LMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRRRENRHTIEMIEKEQR 1032
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1033 EVERRPITKITHKGEIEIESDA 1054
>gi|426235318|ref|XP_004011631.1| PREDICTED: PHD finger protein 3 isoform 2 [Ovis aries]
Length = 1939
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 888 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 947
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 948 EVERRPITKITHKGEIEIESDA 969
>gi|403268692|ref|XP_003926403.1| PREDICTED: PHD finger protein 3 isoform 1 [Saimiri boliviensis
boliviensis]
Length = 2039
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 983 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1042
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1043 EVERRPITKITHKGEIEIESDA 1064
>gi|355561823|gb|EHH18455.1| hypothetical protein EGK_15055 [Macaca mulatta]
Length = 2040
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 985 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1044
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1045 EVERRPITKITHKGEIEIESDA 1066
>gi|332862535|ref|XP_003317935.1| PREDICTED: PHD finger protein 3 isoform 1 [Pan troglodytes]
gi|410216400|gb|JAA05419.1| PHD finger protein 3 [Pan troglodytes]
gi|410258332|gb|JAA17133.1| PHD finger protein 3 [Pan troglodytes]
gi|410301720|gb|JAA29460.1| PHD finger protein 3 [Pan troglodytes]
gi|410354663|gb|JAA43935.1| PHD finger protein 3 [Pan troglodytes]
Length = 2039
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 984 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1043
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1044 EVERRPITKITHKGEIEIESDA 1065
>gi|300796758|ref|NP_001179500.1| PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 976 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1035
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1036 EVERRPITKITHKGEIEIESDA 1057
>gi|432112838|gb|ELK35434.1| PHD finger protein 3 [Myotis davidii]
Length = 2033
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 984 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1043
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1044 EVERRPITKITHKGEIEIESDA 1065
>gi|297291110|ref|XP_001106919.2| PREDICTED: PHD finger protein 3 [Macaca mulatta]
Length = 2037
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 986 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1045
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1046 EVERRPITKITHKGEIEIESDA 1067
>gi|296484308|tpg|DAA26423.1| TPA: PHD finger protein 3 [Bos taurus]
Length = 2025
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 976 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1035
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1036 EVERRPITKITHKGEIEIESDA 1057
>gi|426235316|ref|XP_004011630.1| PREDICTED: PHD finger protein 3 isoform 1 [Ovis aries]
Length = 2027
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 976 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1035
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1036 EVERRPITKITHKGEIEIESDA 1057
>gi|354485811|ref|XP_003505075.1| PREDICTED: PHD finger protein 3-like [Cricetulus griseus]
Length = 2005
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 966 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1025
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1026 EVERRPITKITHKGEIEIESDA 1047
>gi|426353656|ref|XP_004044303.1| PREDICTED: PHD finger protein 3-like [Gorilla gorilla gorilla]
Length = 1309
Score = 47.8 bits (112), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 253 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 312
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 313 EVERRPITKITHKGEIEIESDA 334
>gi|440894606|gb|ELR47016.1| Transcription elongation factor A protein 2, partial [Bos grunniens
mutus]
Length = 284
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 59/134 (44%), Gaps = 28/134 (20%)
Query: 106 VEIKCSDATRTLIRERLAEAFSK-------------VAGEVEEMEKKEQVRACDPVGVAV 152
V + C DA RT RE L A +AG++EE V D
Sbjct: 117 VPVTC-DAVRTKCREMLTAALQTDHDHVAIGADCECLAGQIEEYILFRDVGNTD------ 169
Query: 153 SVESVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI 211
+ +KN L N+KD KNP RKVL G + P+ + EEMASDE + K +
Sbjct: 170 ----MKYKNRVRSRLSNLKDAKNPGLRRKVLCGAITPQQIAVMTSEEMASDELKEIRKAM 225
Query: 212 REDALAKIRDHSVV 225
++A IR+H +
Sbjct: 226 TKEA---IREHQMA 236
>gi|332253853|ref|XP_003276047.1| PREDICTED: PHD finger protein 3, partial [Nomascus leucogenys]
Length = 1807
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 750 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 809
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 810 EVERRPITKITHKGEIEIESDA 831
>gi|157817961|ref|NP_001102261.1| PHD finger protein 3 [Rattus norvegicus]
gi|149046439|gb|EDL99332.1| PHD finger protein 3 (predicted) [Rattus norvegicus]
Length = 2020
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 967 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1026
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1027 EVERRPITKITHKGEIEIESDA 1048
>gi|194391306|dbj|BAG60771.1| unnamed protein product [Homo sapiens]
Length = 861
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 253 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 312
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 313 EVERRPITKITHKGEIEIESDA 334
>gi|395829391|ref|XP_003787843.1| PREDICTED: transcription elongation factor A protein 2 [Otolemur
garnettii]
Length = 356
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 39/127 (30%), Positives = 60/127 (47%), Gaps = 15/127 (11%)
Query: 106 VEIKCSDATRTLIRERLAEAFSK------VAGEVEEMEKKEQVRACDPVGVAVSVESVLF 159
V + C DA R RE L+ A + ++E + Q+ C + V + +
Sbjct: 188 VPVTC-DAVRNKCREMLSAALQTDHDHVAIGADLERLS--AQIEEC--IFRDVGNTDMKY 242
Query: 160 KNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
KN + N+KD KNPD R VL G + P+ + EEMASDE + K + ++A
Sbjct: 243 KNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA--- 299
Query: 219 IRDHSVV 225
IR+H +
Sbjct: 300 IREHQMA 306
>gi|28972117|dbj|BAC65512.1| mKIAA0244 protein [Mus musculus]
Length = 1184
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 122 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 181
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 182 EVERRPITKITHKGEIEIESDA 203
>gi|449497990|ref|XP_004176897.1| PREDICTED: PHD finger protein 3 isoform 3 [Taeniopygia guttata]
gi|449497992|ref|XP_004176898.1| PREDICTED: PHD finger protein 3 isoform 4 [Taeniopygia guttata]
Length = 1981
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE 213
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E RQ N+ E
Sbjct: 911 LMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIE 963
>gi|291396440|ref|XP_002714452.1| PREDICTED: PHD finger protein 3 [Oryctolagus cuniculus]
Length = 2194
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 1138 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMNPEELASKELAAWRRRENRHTIEMIEKEQR 1197
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1198 EVERRPITKITHKGEIEIESDA 1219
>gi|449497988|ref|XP_004176896.1| PREDICTED: PHD finger protein 3 isoform 2 [Taeniopygia guttata]
Length = 2069
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE 213
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E RQ N+ E
Sbjct: 999 LMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIE 1051
>gi|54304003|emb|CAH59746.1| transcription elongation factor A protein 2 (SII) [Homo sapiens]
Length = 86
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 26 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQM 81
>gi|193786100|dbj|BAG51383.1| unnamed protein product [Homo sapiens]
Length = 272
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 53/219 (24%), Positives = 86/219 (39%), Gaps = 41/219 (18%)
Query: 36 LIEFIIMGLSTNQMKNRVSVESKKFKAPSSRTNKKRKFEGEDQAA------FPFMKKPLG 89
L++ +G+S N ++ + S E A S + K+ + D A P
Sbjct: 16 LLQSTRVGMSVNTLRKQSSDEEVIALAKSLIKSWKKLLDASDAKARERGRGMPLPTSSRD 75
Query: 90 QSQPPKQEQDR------------KTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEME 137
S+ P + R T V + C DA R RE L A + +
Sbjct: 76 ASEAPDPSRKRPELPRAPSTPRITTFPPVPVTC-DAVRNKCREMLTAAL--------QTD 126
Query: 138 KKEQVRACDPVGVAVSVESVLFKNMCPF-----------LFNVKDPKNPDFWRKVLLGEV 186
D V ++ +E +F+++ + N+KD KNPD R VL G +
Sbjct: 127 HDHVAIGADCVRLSAQIEECIFRDVGNTDMKYKNRVRSRISNLKDAKNPDLRRNVLCGAI 186
Query: 187 KPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
P+ + EEMASDE + K + ++A IR+H +
Sbjct: 187 TPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 222
>gi|449497986|ref|XP_002192240.2| PREDICTED: PHD finger protein 3 isoform 1 [Taeniopygia guttata]
Length = 2086
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE 213
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E RQ N+ E
Sbjct: 1016 LMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIE 1068
>gi|345304943|ref|XP_001505863.2| PREDICTED: PHD finger protein 3-like [Ornithorhynchus anatinus]
Length = 1190
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 141 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 200
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 201 EVERRPITKITHKGEIEIESDA 222
>gi|326916345|ref|XP_003204468.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Meleagris
gallopavo]
Length = 2064
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE 213
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E RQ N+ E
Sbjct: 992 LMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIE 1044
>gi|195355349|ref|XP_002044154.1| GM22558 [Drosophila sechellia]
gi|194129443|gb|EDW51486.1| GM22558 [Drosophila sechellia]
Length = 162
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
L N++DPKNP K L+G + P+ L PEEMASD+ + +Q +D++ + +V
Sbjct: 59 LANLRDPKNPGLREKFLVGLITPQELSRMTPEEMASDDLKQMRQQYVQDSINAAQLGNVE 118
Query: 226 GEK 228
G K
Sbjct: 119 GTK 121
>gi|148682474|gb|EDL14421.1| mCG4035 [Mus musculus]
Length = 2020
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 963 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1022
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1023 EVERRPITKITHKGEIEIESDA 1044
>gi|124487309|ref|NP_001074549.1| PHD finger protein 3 [Mus musculus]
gi|187953739|gb|AAI37914.1| PHD finger protein 3 [Mus musculus]
Length = 2025
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ R
Sbjct: 963 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQR 1022
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1023 EVERRPITKITHKGEIEIESDA 1044
>gi|118088827|ref|XP_426199.2| PREDICTED: PHD finger protein 3 [Gallus gallus]
Length = 2065
Score = 47.8 bits (112), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/53 (47%), Positives = 33/53 (62%), Gaps = 4/53 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE 213
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E RQ N+ E
Sbjct: 992 LMFNLKDPKNNILFKKVLKGEVTPDHLIKMSPEELASKELAAWRQRENRHTIE 1044
>gi|62543505|ref|NP_001015008.1| transcription elongation factor A protein 3 [Rattus norvegicus]
gi|60552718|gb|AAH91180.1| Transcription elongation factor A (SII), 3 [Rattus norvegicus]
Length = 348
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + PE + EEMASDE R+ RN +E IR+H +
Sbjct: 242 ISNLKDPRNPGLRRNVLSGTISPELIAKMTAEEMASDELRELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|441639245|ref|XP_003280185.2| PREDICTED: transcription elongation factor A protein 2 [Nomascus
leucogenys]
Length = 443
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 15/131 (11%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSK------VAGEVEEMEKKEQVRACDPVGVAVSVE 155
T V + C DA R+ RE LA A + + E + Q+ C + V
Sbjct: 271 TFPPVPVTC-DAVRSKCREMLAAALQTDRDHVAIGADCERLS--AQIEEC--IFRDVGNT 325
Query: 156 SVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
+ +KN + N+KD KNPD R VL G + P+ + EEMASDE + K + ++
Sbjct: 326 DMKYKNRVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKTMTKE 385
Query: 215 ALAKIRDHSVV 225
A IR+H +
Sbjct: 386 A---IREHQMA 393
>gi|328861258|gb|EGG10362.1| hypothetical protein MELLADRAFT_33850 [Melampsora larici-populina
98AG31]
Length = 264
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 45/77 (58%), Gaps = 4/77 (5%)
Query: 159 FKN-MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALA 217
+KN M +FN+KD NP V+ GE+ L + P +MAS+ER+++++++ E+ L
Sbjct: 147 YKNKMRSLIFNLKDKNNPGLREAVVSGEISSMKLCSMGPADMASEERKAQDRKLAEENLF 206
Query: 218 KIRDHSVVGEKELECDA 234
K R G ++ E DA
Sbjct: 207 KARG---AGPQQAETDA 220
>gi|157888820|dbj|BAF80886.1| tissue-specific transcription factor S-II [Mus musculus]
Length = 347
Score = 47.4 bits (111), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + PE + EEMASDE R+ RN +E IR+H +
Sbjct: 241 ISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQE----AIREHQM 296
Query: 225 V 225
Sbjct: 297 A 297
>gi|91834|pir||PS0180 transcription elongation factor S-II-related protein L122, hepatic
- mouse (fragment)
Length = 289
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + PE + EEMASDE R+ RN +E IR+H +
Sbjct: 183 ISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQE----AIREHQM 238
Query: 225 V 225
Sbjct: 239 A 239
>gi|12832213|dbj|BAB22010.1| unnamed protein product [Mus musculus]
Length = 347
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + PE + EEMASDE R+ RN +E IR+H +
Sbjct: 241 ISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQE----AIREHQM 296
Query: 225 V 225
Sbjct: 297 A 297
>gi|32189438|ref|NP_035672.1| transcription elongation factor A protein 3 [Mus musculus]
gi|28381402|sp|P23881.3|TCEA3_MOUSE RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|3288547|emb|CAA11392.1| transcription elongation factor TFIIS.h [Mus musculus]
gi|12840988|dbj|BAB25037.1| unnamed protein product [Mus musculus]
gi|14789853|gb|AAH10807.1| Transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + PE + EEMASDE R+ RN +E IR+H +
Sbjct: 241 ISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQE----AIREHQM 296
Query: 225 V 225
Sbjct: 297 A 297
>gi|195566922|ref|XP_002107024.1| GD17224 [Drosophila simulans]
gi|194204421|gb|EDX17997.1| GD17224 [Drosophila simulans]
Length = 141
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 37/63 (58%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
L N++DPKNP K L+G + P+ L PEEMASD+ + +Q +D++ + +V
Sbjct: 38 LANLRDPKNPGLREKFLVGLITPQELSRMTPEEMASDDLKQMRQQYVQDSINAAQLGNVE 97
Query: 226 GEK 228
G K
Sbjct: 98 GTK 100
>gi|148697997|gb|EDL29944.1| transcription elongation factor A (SII), 3 [Mus musculus]
Length = 347
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + PE + EEMASDE R+ RN +E IR+H +
Sbjct: 241 ISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQE----AIREHQM 296
Query: 225 V 225
Sbjct: 297 A 297
>gi|3133178|dbj|BAA28177.1| unnamed protein product [Mus musculus]
Length = 292
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + PE + EEMASDE R+ RN +E IR+H +
Sbjct: 186 ISNLKDPRNPGLRRNVLSGAISPELIAKMTAEEMASDELRELRNAMTQE----AIREHQM 241
Query: 225 V 225
Sbjct: 242 A 242
>gi|432094021|gb|ELK25813.1| Transcription elongation factor A protein 2 [Myotis davidii]
Length = 131
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 24 IANLKDAKNPDLRRNVLCGTITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQM 79
>gi|47215885|emb|CAG12277.1| unnamed protein product [Tetraodon nigroviridis]
Length = 311
Score = 47.4 bits (111), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + PE + EEMASDE + K + ++A +RDH +
Sbjct: 205 ISNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDELKEIRKNLTKEA---VRDHQMA 261
>gi|410924055|ref|XP_003975497.1| PREDICTED: transcription elongation factor A protein 1-like
[Takifugu rubripes]
Length = 311
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + PE + EEMASDE + K + ++A +RDH +
Sbjct: 205 ISNLKDVKNPNLRRTVLCGSITPERMAKMTAEEMASDELKEIRKNLTKEA---VRDHQMA 261
>gi|403178039|ref|XP_003336480.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
gi|375173311|gb|EFP92061.2| transcription elongation factor S-II [Puccinia graminis f. sp.
tritici CRL 75-36-700-3]
Length = 382
Score = 47.0 bits (110), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 162 MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRD 221
M +FN++D NP V+ GE+ L P++MAS+ER+++++++ E+ L K R
Sbjct: 272 MRSLIFNLRDKNNPGLRESVVSGEISASRLCVMGPQDMASEERKAQDRKLAEENLFKARG 331
Query: 222 HSVVGEKELECDA 234
G ++ E DA
Sbjct: 332 ---AGPQQAETDA 341
>gi|149060978|gb|EDM11588.1| rCG30435 [Rattus norvegicus]
Length = 302
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ P+ + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEV-PIYQEIRNTDMKYKNRVRSR 195
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 196 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 252
>gi|148682306|gb|EDL14253.1| transcription elongation factor A (SII) 1 [Mus musculus]
Length = 302
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 57/120 (47%), Gaps = 9/120 (7%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ P+ + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEV-PIYQEIRNTDMKYKNRVRSR 195
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 196 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 252
>gi|443915704|gb|ELU37060.1| transcription factor s-II (TFIIS), central domain-containing
protein [Rhizoctonia solani AG-1 IA]
Length = 377
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 29/70 (41%), Positives = 38/70 (54%), Gaps = 4/70 (5%)
Query: 166 LFN-VKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
LFN +KD KNP V+ G++ E V PEEMAS+ER+ +N + E A +
Sbjct: 227 LFNNLKDKKNPGLREAVVSGDISAEKFVKMTPEEMASEERKQQNSALNE---ANVHAALG 283
Query: 225 VGEKELECDA 234
GE E E DA
Sbjct: 284 AGEPEAETDA 293
>gi|351714850|gb|EHB17769.1| Transcription elongation factor A protein 2 [Heterocephalus glaber]
Length = 335
Score = 47.0 bits (110), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 54/120 (45%), Gaps = 29/120 (24%)
Query: 106 VEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF 165
V I C DA R RE L A + + M+ K +VR+
Sbjct: 131 VPITC-DAVRNKCREMLTTAL-----QTDHMKYKNRVRS--------------------R 164
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 165 ISNLKDAKNPELRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 221
>gi|16923938|ref|NP_476439.1| transcription elongation factor A protein 2 [Rattus norvegicus]
gi|28380169|sp|Q63799.1|TCEA2_RAT RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|712842|dbj|BAA02310.1| transcription elongation factor S-II [Rattus sp.]
Length = 299
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 106 VEIKCSDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
V I C DA R RE L A VA V Q+ C + + V + +KN
Sbjct: 131 VPITC-DAVRNKCREMLTLALQTDHDHVAVGVSCEHLSSQIEEC--IFLDVGNTDMKYKN 187
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNP R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 188 RVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 244
Query: 221 DHSV 224
+H +
Sbjct: 245 EHQM 248
>gi|6678235|ref|NP_033352.1| transcription elongation factor A protein 2 [Mus musculus]
gi|28380213|sp|Q9QVN7.2|TCEA2_MOUSE RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Protein S-II-T1; AltName: Full=Testis-specific
S-II; AltName: Full=Transcription elongation factor S-II
protein 2; AltName: Full=Transcription elongation factor
TFIIS.l
gi|2055284|dbj|BAA19752.1| S-II-T1 [Mus musculus]
gi|5381259|dbj|BAA82313.1| transcription elongation factor [Mus musculus]
gi|127798625|gb|AAH49617.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|127799183|gb|AAH65786.2| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187951073|gb|AAI38506.1| Transcription elongation factor A (SII), 2 [Mus musculus]
gi|187953941|gb|AAI38505.1| Transcription elongation factor A (SII), 2 [Mus musculus]
Length = 299
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 106 VEIKCSDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
V I C DA R RE L A VA V Q+ C + + V + +KN
Sbjct: 131 VPITC-DAVRNKCREMLTLALQTDHDHVAVGVNCEHLSSQIEEC--IFLDVGNTDMKYKN 187
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNP R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 188 RVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 244
Query: 221 DHSV 224
+H +
Sbjct: 245 EHQM 248
>gi|402881938|ref|XP_003904513.1| PREDICTED: transcription elongation factor A protein 2 [Papio
anubis]
Length = 299
Score = 46.6 bits (109), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 39/125 (31%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
T AV KC R ++ L A VA + Q+ C + V + +KN
Sbjct: 134 TCDAVRNKC----REMLTAALQTAHDHVAIGADCQRLSAQIEEC--IFRDVGNTDMKYKN 187
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 188 RVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 244
Query: 221 DHSVV 225
+H +
Sbjct: 245 EHQMA 249
>gi|41055847|ref|NP_957280.1| transcription elongation factor A protein 2 [Danio rerio]
gi|28277993|gb|AAH46074.1| Transcription elongation factor A (SII), 2 [Danio rerio]
Length = 300
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 57/125 (45%), Gaps = 24/125 (19%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFK---------- 160
+D+ RT RE L A + + Q D +A +E +++
Sbjct: 136 TDSVRTKCRELLVAAL--------QTDGDHQTIGADCEHMAAQIEDYIYQEFKSTDMKYK 187
Query: 161 -NMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQ-IRED 214
+ + N+KD KNPD R VL G + PE + + EEMAS E R++ K+ IRE
Sbjct: 188 TRLRSRISNLKDQKNPDLRRNVLCGNISPERIASMTAEEMASPELKEIRKALTKESIREH 247
Query: 215 ALAKI 219
L+K+
Sbjct: 248 QLSKV 252
>gi|4507385|ref|NP_003186.1| transcription elongation factor A protein 2 isoform a [Homo
sapiens]
gi|114683103|ref|XP_001153063.1| PREDICTED: transcription elongation factor A protein 2 isoform 10
[Pan troglodytes]
gi|397477238|ref|XP_003809984.1| PREDICTED: transcription elongation factor A protein 2 [Pan
paniscus]
gi|28380177|sp|Q15560.1|TCEA2_HUMAN RecName: Full=Transcription elongation factor A protein 2; AltName:
Full=Testis-specific S-II; AltName: Full=Transcription
elongation factor S-II protein 2; AltName:
Full=Transcription elongation factor TFIIS.l
gi|1217591|dbj|BAA09089.1| transcription elongation factor S-II, hS-II-T1 [Homo sapiens]
gi|17511903|gb|AAH18896.1| Transcription elongation factor A (SII), 2 [Homo sapiens]
gi|48145997|emb|CAG33221.1| TCEA2 [Homo sapiens]
gi|119595574|gb|EAW75168.1| transcription elongation factor A (SII), 2, isoform CRA_a [Homo
sapiens]
gi|167773997|gb|ABZ92433.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|307684308|dbj|BAJ20194.1| transcription elongation factor A (SII), 2 [synthetic construct]
gi|410218238|gb|JAA06338.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410267706|gb|JAA21819.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410287524|gb|JAA22362.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|410331783|gb|JAA34838.1| transcription elongation factor A (SII), 2 [Pan troglodytes]
gi|1586557|prf||2204253A transcription elongation factor S-II
Length = 299
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 193 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 249
>gi|297707612|ref|XP_002830595.1| PREDICTED: transcription elongation factor A protein 2 isoform 1
[Pongo abelii]
Length = 299
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 193 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 249
>gi|426392555|ref|XP_004062615.1| PREDICTED: transcription elongation factor A protein 2 [Gorilla
gorilla gorilla]
Length = 299
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 193 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 249
>gi|74210421|dbj|BAE23395.1| unnamed protein product [Mus musculus]
Length = 273
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 57/124 (45%), Gaps = 11/124 (8%)
Query: 106 VEIKCSDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
V I C DA R RE L A VA V Q+ C + + V + +KN
Sbjct: 105 VPITC-DAVRNKCREMLTLALQTDHDHVAVGVNCEHLSSQIEEC--IFLDVGNADMKYKN 161
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNP R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 162 RVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 218
Query: 221 DHSV 224
+H +
Sbjct: 219 EHQM 222
>gi|426241819|ref|XP_004014783.1| PREDICTED: transcription elongation factor A protein 2 [Ovis aries]
Length = 336
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 59/133 (44%), Gaps = 29/133 (21%)
Query: 106 VEIKCSDATRTLIRERLAEAFSK-------------VAGEVEEMEKKEQVRACDPVGVAV 152
V + C DA RT RE L A +AG++EE ++ V
Sbjct: 168 VPVTC-DAVRTKCREMLTAALQTDHDHVAIGADCECLAGQIEECIFRD-----------V 215
Query: 153 SVESVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI 211
+ +KN L N+KD KNP R VL G + P+ + EEMASDE + K +
Sbjct: 216 GNTDMKYKNRVRSRLSNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAM 275
Query: 212 REDALAKIRDHSV 224
++A IR+H +
Sbjct: 276 TKEA---IREHQM 285
>gi|281346348|gb|EFB21932.1| hypothetical protein PANDA_019839 [Ailuropoda melanoleuca]
Length = 264
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 35/122 (28%), Positives = 58/122 (47%), Gaps = 10/122 (8%)
Query: 111 SDATRTLIRERLAEA------FSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC- 163
SD+ R RE LA A + + + EE+ + + P+ + + +KN
Sbjct: 97 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEDILLPIYQEIRNTDMKYKNRVR 156
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHS 223
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H
Sbjct: 157 SRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQ 213
Query: 224 VV 225
+
Sbjct: 214 MA 215
>gi|159164218|pdb|2DME|A Chain A, Solution Structure Of The Tfiis Domain Ii Of Human Phd
Finger Protein 3
Length = 120
Score = 46.6 bits (109), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/39 (53%), Positives = 28/39 (71%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KDPKN ++KVL GEV P+ L+ PEE+AS E
Sbjct: 69 LMFNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKE 107
>gi|390462834|ref|XP_003732920.1| PREDICTED: transcription elongation factor A protein 2 [Callithrix
jacchus]
Length = 324
Score = 46.2 bits (108), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 41/124 (33%), Positives = 58/124 (46%), Gaps = 11/124 (8%)
Query: 106 VEIKCSDATRTLIRERLAEAFSK----VAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
V + C DA R RE LA A VA + Q+ C + V + +KN
Sbjct: 131 VPVTC-DAVRNKCREMLAIALQTDHDHVAIGADCKRLSAQIEEC--IFRDVGNTDMKYKN 187
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 188 RVRSRISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 244
Query: 221 DHSV 224
+H +
Sbjct: 245 EHQM 248
>gi|38505156|ref|NP_942016.1| transcription elongation factor A protein 2 isoform b [Homo
sapiens]
Length = 272
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 166 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 222
>gi|119595576|gb|EAW75170.1| transcription elongation factor A (SII), 2, isoform CRA_c [Homo
sapiens]
Length = 324
Score = 46.2 bits (108), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 193 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 249
>gi|83766945|dbj|BAE57085.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 761
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+A+S+E+ +++N C LFNVK KNP ++L+G + P+TL
Sbjct: 292 LALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSKM 349
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 350 SSQDMASEELQQKDAEIKREAE---RQHIIVQEQ 380
>gi|449665814|ref|XP_002165403.2| PREDICTED: transcription elongation factor A protein 1-like [Hydra
magnipapillata]
Length = 287
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 28/92 (30%), Positives = 47/92 (51%), Gaps = 18/92 (19%)
Query: 146 DPVGVAVSVESVLFKNMC-------------PFLFNVKDPKNPDFWRKVLLGEVKPETLV 192
DP +A ++E+ +F MC + N++D +NP+ + V+ G + PE
Sbjct: 150 DPTNIAAAIENEIF--MCFKDTNIKYRNKIKSKVMNLRDKRNPELCQLVIEGVITPERFA 207
Query: 193 TALPEEMASDERQSRNKQIREDALAKIRDHSV 224
EEMASDE + K+I E+A I++H +
Sbjct: 208 KMTAEEMASDEMKKERKKITEEA---IKEHQL 236
>gi|331242717|ref|XP_003334004.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309312994|gb|EFP89585.1| hypothetical protein PGTG_15734 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 382
Score = 46.2 bits (108), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 24/73 (32%), Positives = 42/73 (57%), Gaps = 3/73 (4%)
Query: 162 MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRD 221
M +FN++D NP V+ GE+ L P++MAS+ER+++++++ E+ L K R
Sbjct: 272 MRSLIFNLRDKNNPGLRESVVSGEISAGRLCVMGPQDMASEERKAQDRKLAEENLFKARG 331
Query: 222 HSVVGEKELECDA 234
G ++ E DA
Sbjct: 332 ---AGPQQAETDA 341
>gi|71051072|gb|AAH99524.1| Phf3 protein, partial [Mus musculus]
Length = 366
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 45/80 (56%), Gaps = 12/80 (15%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIRED 214
FN+KDPKN ++KVL GEV P+ L+ PEE+AS E R++R+ K+ RE
Sbjct: 1 FNLKDPKNNILFKKVLKGEVTPDHLIRMSPEELASKELAAWRRRENRHTIEMIEKEQREV 60
Query: 215 ALAKIRDHSVVGEKELECDA 234
I + GE E+E DA
Sbjct: 61 ERRPITKITHKGEIEIESDA 80
>gi|238501684|ref|XP_002382076.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
gi|220692313|gb|EED48660.1| PHD finger domain protein, putative [Aspergillus flavus NRRL3357]
Length = 924
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+A+S+E+ +++N C LFNVK KNP ++L+G + P+TL
Sbjct: 379 LALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSKM 436
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 437 SSQDMASEELQQKDAEIKREAE---RQHIIVQEQ 467
>gi|317142778|ref|XP_001819087.2| PHD finger domain protein [Aspergillus oryzae RIB40]
Length = 896
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+A+S+E+ +++N C LFNVK KNP ++L+G + P+TL
Sbjct: 351 LALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSKM 408
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 409 SSQDMASEELQQKDAEIKREAE---RQHIIVQEQ 439
>gi|410929091|ref|XP_003977933.1| PREDICTED: transcription elongation factor A protein 2-like
[Takifugu rubripes]
Length = 284
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 41/70 (58%), Gaps = 9/70 (12%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK--IRDH- 222
+ N+KD KNP+ R VL G + P+ + + EEMAS E KQIRE AL K IR+H
Sbjct: 195 ISNLKDQKNPELRRNVLCGNISPQRIASMSAEEMASAEL----KQIRE-ALTKESIREHQ 249
Query: 223 -SVVGEKELE 231
S VG E +
Sbjct: 250 LSKVGGTETD 259
>gi|391863799|gb|EIT73098.1| putative transcription factor [Aspergillus oryzae 3.042]
Length = 903
Score = 45.8 bits (107), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 29/94 (30%), Positives = 51/94 (54%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+A+S+E+ +++N C LFNVK KNP ++L+G + P+TL
Sbjct: 358 LALSIENAMYENFCGGSGETTEQYKAQLRTILFNVK--KNPSLRDRLLVGSLLPDTLSKM 415
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 416 SSQDMASEELQQKDAEIKREAE---RQHIIVQEQ 446
>gi|359318997|ref|XP_003638964.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Canis lupus familiaris]
Length = 1183
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 44/83 (53%), Gaps = 18/83 (21%)
Query: 149 GVAVSVESVLFK----NMCPF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA--- 194
G+A +E+ LF C + LFN++DP+NPD + KV+ G+V PE LV
Sbjct: 592 GIAAGIETALFNLTQTTSCRYKTKYRSLLFNLRDPRNPDLFLKVVRGDVTPEDLVQMSSI 651
Query: 195 --LPEEMAS--DERQSRNKQIRE 213
P+E+A D+ + R +I E
Sbjct: 652 QLAPQELACWRDQEEKRGLEIIE 674
>gi|327280228|ref|XP_003224854.1| PREDICTED: PHD finger protein 3-like [Anolis carolinensis]
Length = 2037
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/39 (51%), Positives = 28/39 (71%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KDPKN +++VL GEV P+ L+ PEE+AS E
Sbjct: 984 LIFNLKDPKNKILFKRVLKGEVTPDHLIRMSPEELASKE 1022
>gi|449488934|ref|XP_002191406.2| PREDICTED: transcription elongation factor A protein 3 [Taeniopygia
guttata]
Length = 379
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP R VL G ++P + EEMASDE ++ RN +E IR+H +
Sbjct: 273 ISNLKDPKNPALRRNVLCGAIEPSLIARMTAEEMASDELKKLRNAMTQE----AIREHQM 328
Query: 225 V 225
Sbjct: 329 A 329
>gi|47215864|emb|CAG02327.1| unnamed protein product [Tetraodon nigroviridis]
Length = 124
Score = 45.8 bits (107), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 40/68 (58%), Gaps = 9/68 (13%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK--IRDH--S 223
N+KD KNP+ R VL G + P+ + + EEMAS E KQIRE AL K IR+H S
Sbjct: 22 NLKDHKNPELRRNVLCGNISPQRIASMSAEEMASAEL----KQIRE-ALTKESIREHQLS 76
Query: 224 VVGEKELE 231
VG E +
Sbjct: 77 KVGGAETD 84
>gi|195478903|ref|XP_002100690.1| GE17201 [Drosophila yakuba]
gi|194188214|gb|EDX01798.1| GE17201 [Drosophila yakuba]
Length = 162
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 32/142 (22%)
Query: 106 VEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRAC-DPVGVAVSVESVLFKNM-- 162
V IKC RE LA A AG++ E C DP +A +E ++ +
Sbjct: 5 VRIKC--------REMLAAALQ--AGDLPE--------GCGDPEDMAAQLEEAIYVELKC 46
Query: 163 CPF---------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRE 213
C L N++DPKNP K LLG + E + PEEMASD+ + ++ +
Sbjct: 47 CQVKYKNRIRSRLANLRDPKNPGLREKFLLGLIGVEKMARMTPEEMASDDLKQMRQKFVQ 106
Query: 214 DALAKIRDHSVVGEKE--LECD 233
D++ K + G K +CD
Sbjct: 107 DSINKAQMAKFQGTKTDLFKCD 128
>gi|156359678|ref|XP_001624893.1| predicted protein [Nematostella vectensis]
gi|156211698|gb|EDO32793.1| predicted protein [Nematostella vectensis]
Length = 300
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 67/153 (43%), Gaps = 25/153 (16%)
Query: 82 PFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQ 141
P + S P +D K S ++ R RE + + +V GE E + K E+
Sbjct: 108 PALSTKSDTSDAPTTPKDNKPISFPNTITDESVRGKCREMIVNSL-QVQGEFEAVTKPEE 166
Query: 142 VRACDPVGVAVSVESVLF-----------KNMCPFLFNVKDPKNPDFWRKVLLGEVKPET 190
V A + E ++F + + + N++DPKNP +VL GE+ P
Sbjct: 167 V--------AAACEQLIFEEFKDTNVKYKQRIRSRVNNLRDPKNPMLKVRVLGGEISPAR 218
Query: 191 LVTALPEEMASDE----RQSRNKQ-IREDALAK 218
L EEMASDE RQ K+ IRE +AK
Sbjct: 219 LAVMTSEEMASDEMKKLRQEFTKEGIREAQMAK 251
>gi|383873107|ref|NP_001244428.1| transcription elongation factor A protein 2 [Macaca mulatta]
gi|380815990|gb|AFE79869.1| transcription elongation factor A protein 2 isoform a [Macaca
mulatta]
Length = 299
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
T AV KC R ++ L A VA + Q+ C + V + +KN
Sbjct: 134 TCDAVRNKC----REMLTAALQTAHDHVAIGADCQRLSAQIEEC--IFRDVGNTDMKYKN 187
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD +NPD R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 188 RVRSRISNLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 244
Query: 221 DHSVV 225
+H +
Sbjct: 245 EHQMA 249
>gi|432094693|gb|ELK26173.1| Transcription elongation factor A protein 1 [Myotis davidii]
Length = 376
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 54/117 (46%), Gaps = 27/117 (23%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVE--EMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFN 168
SD+ R RE LA A GE+ +M+ K +VR+ + N
Sbjct: 222 SDSVRLKCREMLAAALR--TGEIRNTDMKYKNRVRS--------------------RISN 259
Query: 169 VKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 260 LKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 313
>gi|355562936|gb|EHH19498.1| Transcription elongation factor S-II protein 2, partial [Macaca
mulatta]
Length = 273
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 57/125 (45%), Gaps = 10/125 (8%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
T AV KC R ++ L A VA + Q+ C + V + +KN
Sbjct: 110 TCDAVRNKC----REMLTAALQTAHDHVAIGADCQRLSAQIEEC--IFRDVGNTDMKYKN 163
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD +NPD R VL G + P+ + EEMASDE + K + ++A IR
Sbjct: 164 RVRSRISNLKDARNPDLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IR 220
Query: 221 DHSVV 225
+H +
Sbjct: 221 EHQMA 225
>gi|226442714|ref|NP_001139934.1| transcription elongation factor A protein 1 [Salmo salar]
gi|221220186|gb|ACM08754.1| Transcription elongation factor A protein 1 [Salmo salar]
Length = 311
Score = 45.8 bits (107), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 60/125 (48%), Gaps = 22/125 (17%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLF---KNMCP--- 164
SD+ R RE L++A AG+ + CD + A +E +F KN P
Sbjct: 147 SDSVRIKCREMLSQALQ--AGD----DYIAIGADCDQL--AAQIEEYIFCEFKNTDPKYK 198
Query: 165 -----FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKI 219
+ N+KD KNP+ + VL G V P+ + +EMASDE + K + ++A I
Sbjct: 199 NRVRSRIANLKDIKNPNLRKSVLCGNVSPDRMAKMTAQEMASDELKLIRKNLTKEA---I 255
Query: 220 RDHSV 224
RDH V
Sbjct: 256 RDHQV 260
>gi|403282600|ref|XP_003932732.1| PREDICTED: transcription elongation factor A protein 2 [Saimiri
boliviensis boliviensis]
Length = 306
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 200 ISNLKDAKNPDLRRNVLCGAITPQRIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 256
>gi|220592|dbj|BAA00768.1| unnamed protein product [Mus musculus]
Length = 235
Score = 45.8 bits (107), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 71 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 128
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 129 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 185
>gi|354500641|ref|XP_003512407.1| PREDICTED: transcription elongation factor A protein 2-like
[Cricetulus griseus]
Length = 299
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/130 (31%), Positives = 60/130 (46%), Gaps = 15/130 (11%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSK------VAGEVEEMEKKEQVRACDPVGVAVSVE 155
T +V I C DA R RE L A V + E + Q+ C + + V
Sbjct: 127 TFPSVPITC-DAVRNKCREMLTLALQTDHDHKAVGVDCEHLS--AQIEEC--IFLDVGNT 181
Query: 156 SVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
+ +KN + N+KD KNP R VL G + P+ + EEMASDE + K + ++
Sbjct: 182 DMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE 241
Query: 215 ALAKIRDHSV 224
A IR+H +
Sbjct: 242 A---IREHQM 248
>gi|344254454|gb|EGW10558.1| Transcription elongation factor A protein 2 [Cricetulus griseus]
Length = 255
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 60/131 (45%), Gaps = 15/131 (11%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSK------VAGEVEEMEKKEQVRACDPVGVAVSVE 155
T +V I C DA R RE L A V + E + Q+ C + + V
Sbjct: 83 TFPSVPITC-DAVRNKCREMLTLALQTDHDHKAVGVDCEHLS--AQIEEC--IFLDVGNT 137
Query: 156 SVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
+ +KN + N+KD KNP R VL G + P+ + EEMASDE + K + ++
Sbjct: 138 DMKYKNRVRSRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKE 197
Query: 215 ALAKIRDHSVV 225
A IR+H +
Sbjct: 198 A---IREHQMA 205
>gi|326932945|ref|XP_003212571.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Meleagris gallopavo]
Length = 466
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP+ R VL G + P + EEMASDE ++ RN +E IR+H +
Sbjct: 295 ISNLKDPKNPNLRRNVLCGAIAPALIARMTAEEMASDELKELRNAMTQE----AIREHQM 350
Query: 225 V 225
Sbjct: 351 A 351
>gi|91833|pir||JX0167 transcription elongation factor S-II-related protein L121, hepatic
- mouse
Length = 235
Score = 45.4 bits (106), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 71 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 128
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 129 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 185
>gi|147905221|ref|NP_001081593.1| TFIIS elongation factor [Xenopus laevis]
gi|1325970|emb|CAA66256.1| TFIIS elongation factor [Xenopus laevis]
gi|50414699|gb|AAH77765.1| XTFIIS.oB protein [Xenopus laevis]
Length = 303
Score = 45.4 bits (106), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 197 IANLKDAKNPNLRRNVLCGNIAPDFFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 253
Query: 226 GEKELECD 233
E D
Sbjct: 254 KTGGTETD 261
>gi|134079343|emb|CAK96972.1| unnamed protein product [Aspergillus niger]
Length = 955
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+++S+ES +++N+C P+ +FNVK KNP ++L+G + P+ L
Sbjct: 397 LSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSKM 454
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 455 STQDMASEELQQKDAEIKREAE---RQHIIVQEQ 485
>gi|354485610|ref|XP_003504976.1| PREDICTED: transcription elongation factor A protein 3-like
[Cricetulus griseus]
Length = 362
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + P + EEMASDE R+ RN +E IR+H +
Sbjct: 251 ISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 306
Query: 225 V 225
Sbjct: 307 A 307
>gi|240972273|ref|XP_002400972.1| transcription factor S-II, putative [Ixodes scapularis]
gi|215490968|gb|EEC00609.1| transcription factor S-II, putative [Ixodes scapularis]
Length = 255
Score = 45.4 bits (106), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 43/97 (44%), Gaps = 19/97 (19%)
Query: 144 ACDPVGVAVSVESVLFKNMCPF--------------LFNVKDPKNPDFWRKVLLGEVKPE 189
CD G+A +E + C F + N+KD KNP+ VL G + P+
Sbjct: 113 GCDLDGLAAKIEEYILSWHCEFGDTNMKYKNRVRSRVSNLKDSKNPNLRLNVLHGAIDPD 172
Query: 190 TLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSVV 225
+ +EMASDE +Q R K +E I DH +
Sbjct: 173 RIARMTADEMASDEMKQMRQKFTKE----AINDHQMA 205
>gi|45360521|ref|NP_988887.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
gi|37589996|gb|AAH59769.1| hypothetical protein MGC76031 [Xenopus (Silurana) tropicalis]
gi|89267843|emb|CAJ82979.1| transcription elongation factor A (SII), 1 [Xenopus (Silurana)
tropicalis]
Length = 304
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 198 IANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKEA---IREHQMA 254
Query: 226 GEKELECD 233
E D
Sbjct: 255 RTGGTETD 262
>gi|431891278|gb|ELK02155.1| Zinc finger protein 436 [Pteropus alecto]
Length = 622
Score = 45.4 bits (106), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDP+NP R VL G + E + EEMASDE R+ RN + IRE +AK
Sbjct: 11 ISNLKDPRNPGLRRNVLSGAISAELIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 69
>gi|317032975|ref|XP_001394653.2| PHD finger domain protein [Aspergillus niger CBS 513.88]
Length = 903
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+++S+ES +++N+C P+ +FNVK KNP ++L+G + P+ L
Sbjct: 345 LSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSKM 402
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 403 STQDMASEELQQKDAEIKREAE---RQHIIVQEQ 433
>gi|350631410|gb|EHA19781.1| hypothetical protein ASPNIDRAFT_119842 [Aspergillus niger ATCC
1015]
Length = 891
Score = 45.1 bits (105), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 53/94 (56%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+++S+ES +++N+C P+ +FNVK KNP ++L+G + P+ L
Sbjct: 333 LSLSLESAMYENICGGTGEPTEPYRSQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSKM 390
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 391 STQDMASEELQQKDAEIKREAE---RQHIIVQEQ 421
>gi|392572626|gb|EIW65771.1| hypothetical protein TREMEDRAFT_72529 [Tremella mesenterica DSM
1558]
Length = 335
Score = 45.1 bits (105), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 29/96 (30%), Positives = 48/96 (50%), Gaps = 15/96 (15%)
Query: 151 AVSVESVLFKN------------MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
+V++E+ +FK M N+KD NP +++LG + E L + E+
Sbjct: 208 SVAIEAAVFKQQKSQSGNEYRAKMRSLFLNLKDKGNPGLRNEIVLGYLTAEKLASLSKED 267
Query: 199 MASDERQSRNKQIREDALAKIRDHSVVGEKELECDA 234
MAS+ ++ N++I D L K + VGE + E DA
Sbjct: 268 MASESIRAMNEKIANDNLFKAK---AVGETQAETDA 300
>gi|405944776|pdb|2LW4|A Chain A, Solution Nmr Structure Of Human Transcription Elongation
Factor A Protein 2, Central Domain, Northeast Structural
Genomics Consortium (Nesg) Target Hr8682b
Length = 113
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/38 (50%), Positives = 24/38 (63%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+ N+KD KNPD R VL G + P+ + EEMASDE
Sbjct: 67 ISNLKDAKNPDLRRNVLCGAITPQQIAVMTSEEMASDE 104
>gi|313221451|emb|CBY32201.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KD KNPD V+ G + P+ L + PEEMAS + Q K+ ++A I DH +
Sbjct: 191 NLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEA---INDHQMAQN 247
Query: 228 KELECD 233
+ + D
Sbjct: 248 EGTQTD 253
>gi|194894439|ref|XP_001978066.1| GG17893 [Drosophila erecta]
gi|190649715|gb|EDV46993.1| GG17893 [Drosophila erecta]
Length = 162
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIRE 213
L N++DPKNP K LLG + E L PEEMASD+ +Q R K ++E
Sbjct: 59 LANLRDPKNPALREKFLLGLISVEQLARMTPEEMASDDLKQMRQKFVQE 107
>gi|313225202|emb|CBY20996.1| unnamed protein product [Oikopleura dioica]
Length = 295
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 36/66 (54%), Gaps = 3/66 (4%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KD KNPD V+ G + P+ L + PEEMAS + Q K+ ++A I DH +
Sbjct: 191 NLKDAKNPDLRDSVMTGVISPDKLASMKPEEMASKQLQELRKKFTKEA---INDHQMAQN 247
Query: 228 KELECD 233
+ + D
Sbjct: 248 EGTQTD 253
>gi|147901281|ref|NP_001089046.1| transcription elongation factor A (SII), 1 [Xenopus laevis]
gi|1325972|emb|CAA66255.1| TFIIS elongation factor [Xenopus laevis]
gi|1389556|dbj|BAA11672.1| transcriptional factor [Xenopus laevis]
gi|47122876|gb|AAH70555.1| LOC594866 protein [Xenopus laevis]
Length = 303
Score = 45.1 bits (105), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 36/68 (52%), Gaps = 3/68 (4%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 197 IANLKDAKNPNLRRNVLCGNIAPDLFARMSAEEMASDELKEMRKNLTKEA---IREHQMA 253
Query: 226 GEKELECD 233
E D
Sbjct: 254 RTGGTETD 261
>gi|344248661|gb|EGW04765.1| Transcription elongation factor A protein 3 [Cricetulus griseus]
Length = 138
Score = 45.1 bits (105), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAK 218
+ N+KDP+NP R VL G + P + EEMASDE R+ RN + IRE +AK
Sbjct: 30 ISNLKDPRNPGLRRNVLSGAISPGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAK 87
>gi|74146960|dbj|BAE25455.1| unnamed protein product [Mus musculus]
Length = 301
Score = 45.1 bits (105), Expect = 0.027, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|410966896|ref|XP_003989963.1| PREDICTED: SPOC domain-containing protein 1 [Felis catus]
Length = 1178
Score = 45.1 bits (105), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 45/83 (54%), Gaps = 18/83 (21%)
Query: 149 GVAVSVESVLF----KNMCPF-------LFNVKDPKNPDFWRKVLLGEVKPETLV----T 193
G+A +E+ LF C + LFN++DP+NPD + KVL G+V P LV T
Sbjct: 601 GIAADIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVLQGDVTPHGLVRMSST 660
Query: 194 AL-PEEMA--SDERQSRNKQIRE 213
L P+E+A D+ + R +I E
Sbjct: 661 QLAPQELARWRDQEEKRGLEIIE 683
>gi|291391945|ref|XP_002712401.1| PREDICTED: transcription elongation factor A 1 isoform 2
[Oryctolagus cuniculus]
Length = 279
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 115 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 172
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 173 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 229
>gi|348588983|ref|XP_003480244.1| PREDICTED: LOW QUALITY PROTEIN: PHD finger protein 3-like [Cavia
porcellus]
Length = 2019
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 32/82 (39%), Positives = 45/82 (54%), Gaps = 12/82 (14%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------RQSRN------KQIR 212
+FN+KDPKN ++KVL GEV P+ L+ EE+AS E R++R+ K+ R
Sbjct: 966 LMFNLKDPKNNILFKKVLKGEVTPDHLIKMSSEELASKELAAWRRRENRHTIEMIEKEQR 1025
Query: 213 EDALAKIRDHSVVGEKELECDA 234
E I + GE E+E DA
Sbjct: 1026 EVERRPITKITHKGEIEIESDA 1047
>gi|291391943|ref|XP_002712400.1| PREDICTED: transcription elongation factor A 1 isoform 1
[Oryctolagus cuniculus]
Length = 300
Score = 44.7 bits (104), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 136 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 193
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 194 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 250
>gi|6755728|ref|NP_035671.1| transcription elongation factor A protein 1 isoform 2 [Mus
musculus]
gi|28380825|sp|P10711.2|TCEA1_MOUSE RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|201939|gb|AAA40419.1| transcription factor S-II [Mus musculus]
gi|13543739|gb|AAH06022.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|38181911|gb|AAH61490.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|52789281|gb|AAH83127.1| Transcription elongation factor A (SII) 1 [Mus musculus]
gi|74193672|dbj|BAE22787.1| unnamed protein product [Mus musculus]
Length = 301
Score = 44.7 bits (104), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|201937|gb|AAA40418.1| transcription factor S-II [Mus musculus]
Length = 266
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 102 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 159
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 160 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 216
>gi|351701808|gb|EHB04727.1| Transcription elongation factor A protein 1, partial
[Heterocephalus glaber]
Length = 285
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)
Query: 111 SDATRTLIRERLAEA------FSKVAGEVEEM--EKKEQVRACDPVGVAVSVESVLFKNM 162
SD+ R RE LA A + + + EE+ + +E + P+ + + +KN
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEEDILFQVPIYQEIRNTDMKYKNR 175
Query: 163 C-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRD 221
+ N+KD KNP+ + VL G + P+ EEMASDE + K + +A IR+
Sbjct: 176 VRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTREA---IRE 232
Query: 222 HSVV 225
H +
Sbjct: 233 HQMA 236
>gi|348554119|ref|XP_003462873.1| PREDICTED: transcription elongation factor A protein 2-like [Cavia
porcellus]
Length = 325
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KD KNP+ R VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 194 ISNLKDAKNPELRRNVLCGTITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQM 249
>gi|431891774|gb|ELK02308.1| Transcription elongation factor A protein 1 [Pteropus alecto]
Length = 325
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 38/120 (31%), Positives = 58/120 (48%), Gaps = 12/120 (10%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ D + V ++ +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEE-DILCVNTDMK---YKNRVRSR 192
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 193 ISNLKDAKNPNLRKNVLCGNISPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 249
>gi|71043668|ref|NP_001020906.1| transcription elongation factor A protein 1 [Rattus norvegicus]
gi|293353479|ref|XP_002728223.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Rattus norvegicus]
gi|392333220|ref|XP_003752832.1| PREDICTED: transcription elongation factor A protein 1-like [Rattus
norvegicus]
gi|73919859|sp|Q4KLL0.1|TCEA1_RAT RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|68533992|gb|AAH99141.1| Transcription elongation factor A (SII) 1 [Rattus norvegicus]
gi|149040017|gb|EDL94101.1| rCG63250 [Rattus norvegicus]
Length = 301
Score = 44.7 bits (104), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|229094714|ref|NP_001153223.1| transcription elongation factor A protein 1 isoform 1 [Mus
musculus]
Length = 312
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 148 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 205
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 206 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 262
>gi|327279244|ref|XP_003224367.1| PREDICTED: transcription elongation factor A protein 1-like [Anolis
carolinensis]
Length = 341
Score = 44.7 bits (104), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAFSK----VAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 140 SDSVRMKCREMLAAALKTGDDYIAIGADEEELGSQIE--EAIFQELKNTDMKYKNRVRSR 197
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 198 IANLKDTKNPNLRKNVLCGNIAPDRFAKMTAEEMASDELKEMRKNLTKEA---IREHQMA 254
>gi|229094709|ref|NP_001153222.1| transcription elongation factor A protein 1 isoform 3 [Mus
musculus]
Length = 300
Score = 44.7 bits (104), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 136 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 193
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 194 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 250
>gi|301788390|ref|XP_002929610.1| PREDICTED: transcription elongation factor A protein 1-like
[Ailuropoda melanoleuca]
Length = 301
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|353234293|emb|CCA66319.1| related to transcription elongation factor TFIIS [Piriformospora
indica DSM 11827]
Length = 280
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 159 FKN-MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALA 217
++N M N+K +NP + V+ G++ E LVT +MAS+ER+ ++K I E+ L
Sbjct: 166 YRNKMRSLFLNLKGKENPSLRQGVVSGDISAEKLVTMSSSDMASEERKQKDKAIEEENLF 225
Query: 218 KIRDHSVVGEKELECDA 234
K GE++ E DA
Sbjct: 226 K---SLGAGEQQAETDA 239
>gi|119579237|gb|EAW58833.1| hCG1746234, isoform CRA_a [Homo sapiens]
Length = 160
Score = 44.7 bits (104), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+ D KNPD + G + P+ L EEMASDE + +K +R++A IR+H +
Sbjct: 54 ISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDELKEMHKNLRKEA---IREHQMA 110
>gi|402878243|ref|XP_003902806.1| PREDICTED: transcription elongation factor A protein 1, partial
[Papio anubis]
Length = 254
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 173
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 174 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 230
>gi|355723558|gb|AES07930.1| transcription elongation factor A , 1 [Mustela putorius furo]
Length = 314
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 151 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 208
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 209 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 265
>gi|395506561|ref|XP_003757600.1| PREDICTED: transcription elongation factor A protein 2 [Sarcophilus
harrisii]
Length = 300
Score = 44.7 bits (104), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 194 ISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQMA 250
>gi|17136888|ref|NP_476967.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|442627872|ref|NP_001260457.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
gi|135660|sp|P20232.1|TFS2_DROME RecName: Full=Transcription elongation factor S-II; AltName:
Full=RNA polymerase II elongation factor DMS-II;
AltName: Full=TFIIS
gi|7921|emb|CAA37710.1| unnamed protein product [Drosophila melanogaster]
gi|6713129|gb|AAA92864.2| transcription elongation factor [Drosophila melanogaster]
gi|7298202|gb|AAF53436.1| RNA polymerase II elongation factor, isoform A [Drosophila
melanogaster]
gi|15291997|gb|AAK93267.1| LD34766p [Drosophila melanogaster]
gi|220942248|gb|ACL83667.1| TfIIS-PA [synthetic construct]
gi|440213800|gb|AGB92992.1| RNA polymerase II elongation factor, isoform B [Drosophila
melanogaster]
Length = 313
Score = 44.3 bits (103), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 111 SDATRTLIRERLAEAFS-----KVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN-MCP 164
+DA R RE LA A + GE EEM + + D + + + +KN +
Sbjct: 150 TDAVRIKCREMLATALKIGEVPEGCGEPEEMAAELE----DAIYSEFNNTDMKYKNRIRS 205
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V
Sbjct: 206 RVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATV 265
Query: 225 VGEKE--LEC 232
G K L+C
Sbjct: 266 QGTKTDLLKC 275
>gi|339443|gb|AAA61138.1| transcription elongation factor SII [Homo sapiens]
Length = 301
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|45439355|ref|NP_958845.1| transcription elongation factor A protein 1 isoform 2 [Homo
sapiens]
gi|332213783|ref|XP_003256010.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Nomascus leucogenys]
gi|426359605|ref|XP_004047058.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Gorilla gorilla gorilla]
gi|37072|emb|CAA40484.1| transcription elongation factor [Homo sapiens]
Length = 280
Score = 44.3 bits (103), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 173
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 174 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 230
>gi|327271917|ref|XP_003220733.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 327
Score = 44.3 bits (103), Expect = 0.039, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KD KNPD + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 193 ISNLKDSKNPDLRKNVLCGVITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQM 248
>gi|114052218|ref|NP_001039390.1| transcription elongation factor A protein 1 [Bos taurus]
gi|122135281|sp|Q29RL9.1|TCEA1_BOVIN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1
gi|88954354|gb|AAI14118.1| Transcription elongation factor A (SII), 1 [Bos taurus]
Length = 301
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|61365803|gb|AAX42766.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|403300334|ref|XP_003940898.1| PREDICTED: transcription elongation factor A protein 1 [Saimiri
boliviensis boliviensis]
Length = 301
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|126302941|ref|XP_001375502.1| PREDICTED: transcription elongation factor A protein 2-like
[Monodelphis domestica]
Length = 359
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 195 ISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQMA 251
>gi|119607146|gb|EAW86740.1| transcription elongation factor A (SII), 1, isoform CRA_b [Homo
sapiens]
Length = 260
Score = 44.3 bits (103), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 96 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 153
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 154 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 210
>gi|119607145|gb|EAW86739.1| transcription elongation factor A (SII), 1, isoform CRA_a [Homo
sapiens]
Length = 287
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 123 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 180
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 181 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 237
>gi|5803191|ref|NP_006747.1| transcription elongation factor A protein 1 isoform 1 [Homo
sapiens]
gi|386781537|ref|NP_001247637.1| transcription elongation factor A protein 1 [Macaca mulatta]
gi|332213781|ref|XP_003256009.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Nomascus leucogenys]
gi|426359603|ref|XP_004047057.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Gorilla gorilla gorilla]
gi|1174652|sp|P23193.2|TCEA1_HUMAN RecName: Full=Transcription elongation factor A protein 1; AltName:
Full=Transcription elongation factor S-II protein 1;
AltName: Full=Transcription elongation factor TFIIS.o
gi|37074|emb|CAA44470.1| transcription elongation factor [Homo sapiens]
gi|47940496|gb|AAH72460.1| Transcription elongation factor A (SII), 1 [Homo sapiens]
gi|49457436|emb|CAG47017.1| TCEA1 [Homo sapiens]
gi|54696852|gb|AAV38798.1| transcription elongation factor A (SII), 1 [Homo sapiens]
gi|61355862|gb|AAX41184.1| transcription elongation factor A 1 [synthetic construct]
gi|158261931|dbj|BAF83143.1| unnamed protein product [Homo sapiens]
gi|380815988|gb|AFE79868.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|383421129|gb|AFH33778.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
gi|384942088|gb|AFI34649.1| transcription elongation factor A protein 1 isoform 1 [Macaca
mulatta]
Length = 301
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|349602860|gb|AEP98866.1| Transcription elongation factor A protein 1-like protein, partial
[Equus caballus]
Length = 290
Score = 44.3 bits (103), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 126 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 183
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 184 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 240
>gi|60829875|gb|AAX36898.1| transcription elongation factor A 1 [synthetic construct]
Length = 302
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|395841852|ref|XP_003793744.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Otolemur garnettii]
Length = 301
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|417398602|gb|JAA46334.1| Putative transcription elongation factor a protein 1 [Desmodus
rotundus]
Length = 301
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|343887420|ref|NP_001230609.1| transcription elongation factor A protein 1 [Sus scrofa]
Length = 300
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 136 SDSVRLKCREMLAAALRTGEDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 193
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 194 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 250
>gi|395841854|ref|XP_003793745.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Otolemur garnettii]
Length = 280
Score = 44.3 bits (103), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 173
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 174 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 230
>gi|221042038|dbj|BAH12696.1| unnamed protein product [Homo sapiens]
Length = 280
Score = 44.3 bits (103), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 173
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 174 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 230
>gi|355697956|gb|EHH28504.1| hypothetical protein EGK_18954, partial [Macaca mulatta]
gi|355779691|gb|EHH64167.1| hypothetical protein EGM_17319, partial [Macaca fascicularis]
Length = 300
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|126303929|ref|XP_001375747.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 44.3 bits (103), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + +K + ++A IR+H +
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMHKNLTKEA---IREHQMA 251
>gi|410987185|ref|XP_003999887.1| PREDICTED: transcription elongation factor A protein 1 [Felis
catus]
Length = 353
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 59/126 (46%), Gaps = 15/126 (11%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSV------ESVLFK 160
SD+ R RE LA A VA +E E Q+ D + V V + + +K
Sbjct: 182 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIEE-DILSVLVPIYQEIRNTDMKYK 240
Query: 161 NMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKI 219
N + N+KD KNP+ + VL G + P+ EEMASDE + K + ++A I
Sbjct: 241 NRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---I 297
Query: 220 RDHSVV 225
R+H +
Sbjct: 298 REHQMA 303
>gi|291387971|ref|XP_002710525.1| PREDICTED: transcription elongation factor A 1 [Oryctolagus
cuniculus]
Length = 329
Score = 44.3 bits (103), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|432867255|ref|XP_004071102.1| PREDICTED: transcription elongation factor A protein 2-like
[Oryzias latipes]
Length = 309
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 9/68 (13%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK--IRDH--S 223
N+KD KNPD R VL G + + + EEMAS E KQIRE AL K IR+H S
Sbjct: 205 NLKDQKNPDLRRNVLCGNISAQRIACMTAEEMASAEL----KQIRE-ALTKESIREHQLS 259
Query: 224 VVGEKELE 231
VG E +
Sbjct: 260 KVGGTETD 267
>gi|126303931|ref|XP_001375763.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + +K + ++A IR+H +
Sbjct: 174 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMHKNLTKEA---IREHQMA 230
>gi|195338531|ref|XP_002035878.1| GM14545 [Drosophila sechellia]
gi|194129758|gb|EDW51801.1| GM14545 [Drosophila sechellia]
Length = 311
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 62/130 (47%), Gaps = 12/130 (9%)
Query: 111 SDATRTLIRERLAEAFS-----KVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN-MCP 164
+DA R RE LA A + GE EEM + + D + + + +KN +
Sbjct: 148 TDAVRIKCREMLATALKIGEVPEGCGEPEEMAAELE----DAIYSEFNNTDMKYKNRIRS 203
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V
Sbjct: 204 RVANLKDPKNPGLRGNFMCGAVTAKQLARMTPEEMASDEMKKLREKFVKEAINDAQLATV 263
Query: 225 VGEKE--LEC 232
G K L+C
Sbjct: 264 QGTKTDLLKC 273
>gi|119579238|gb|EAW58834.1| hCG1746234, isoform CRA_b [Homo sapiens]
Length = 241
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+ D KNPD + G + P+ L EEMASDE + +K +R++A IR+H +
Sbjct: 135 ISNLTDAKNPDLRKNAPCGNIPPDLLARMTAEEMASDELKEMHKNLRKEA---IREHQMA 191
>gi|296480638|tpg|DAA22753.1| TPA: transcription elongation factor A protein 1 [Bos taurus]
Length = 286
Score = 43.9 bits (102), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|334325647|ref|XP_003340666.1| PREDICTED: transcription elongation factor A protein 1-like
[Monodelphis domestica]
Length = 301
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRMKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQELRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|345566736|gb|EGX49678.1| hypothetical protein AOL_s00078g167 [Arthrobotrys oligospora ATCC
24927]
Length = 316
Score = 43.9 bits (102), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
FN+KDPKNP V+ G ++P L EEMAS ER+ +++I ++ +
Sbjct: 209 LFFNLKDPKNPSLRNNVISGRIEPMRLALMSSEEMASAERKREDEKIEQENM 260
>gi|444728032|gb|ELW68496.1| Zinc finger protein 436 [Tupaia chinensis]
Length = 763
Score = 43.9 bits (102), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDP+NP RKVL G + + EEMASDE R+ RN + IRE +AK
Sbjct: 169 ISNLKDPRNPGLRRKVLSGAIAAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 227
>gi|296226473|ref|XP_002758943.1| PREDICTED: transcription elongation factor A protein 1 [Callithrix
jacchus]
Length = 323
Score = 43.9 bits (102), Expect = 0.052, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 159 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 216
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 217 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 273
>gi|345793232|ref|XP_535071.3| PREDICTED: transcription elongation factor A protein 1 [Canis lupus
familiaris]
Length = 399
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAFSK----VAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|345325225|ref|XP_001507346.2| PREDICTED: hypothetical protein LOC100075902 [Ornithorhynchus
anatinus]
Length = 604
Score = 43.9 bits (102), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNPD + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 259 ISNLKDSKNPDLRKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQMA 315
>gi|148675493|gb|EDL07440.1| transcription elongation factor A (SII), 2 [Mus musculus]
Length = 298
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 38/121 (31%), Positives = 56/121 (46%), Gaps = 6/121 (4%)
Query: 106 VEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRA-CDPVGVAVSVESVLFKNMC- 163
V I C DA R RE L A V E + + + + + V + +KN
Sbjct: 131 VPITC-DAVRNKCREMLTLALQTDHDHVAVGVNCEHLSSQIEDIFLDVGNTDMKYKNRVR 189
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHS 223
+ N+KD KNP R VL G + P+ + EEMASDE + K + ++A IR+H
Sbjct: 190 SRISNLKDAKNPGLRRNVLCGAITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQ 246
Query: 224 V 224
+
Sbjct: 247 M 247
>gi|126342511|ref|XP_001362232.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 43.9 bits (102), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRMKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQELRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|226372852|gb|ACO52051.1| Transcription elongation factor A protein 1 [Rana catesbeiana]
Length = 306
Score = 43.9 bits (102), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 25/68 (36%), Positives = 35/68 (51%), Gaps = 3/68 (4%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + P EEMASDE + K + ++A IR+H +
Sbjct: 200 IANLKDGKNPNLRRNVLCGNISPIVFAKMSAEEMASDELKEMRKNLTKEA---IREHQMA 256
Query: 226 GEKELECD 233
E D
Sbjct: 257 KTGGTETD 264
>gi|194857365|ref|XP_001968937.1| GG24225 [Drosophila erecta]
gi|190660804|gb|EDV57996.1| GG24225 [Drosophila erecta]
Length = 313
Score = 43.9 bits (102), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 111 SDATRTLIRERLAEAFS-----KVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN-MCP 164
+DA R RE LA A + GE EEM + + D + + +KN +
Sbjct: 150 TDAVRIKCREMLAAALKIGEVPEGCGEPEEMAAELE----DAIYSEFKNTDMKYKNRIRS 205
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V
Sbjct: 206 RVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATV 265
Query: 225 VGEKE--LEC 232
G K L+C
Sbjct: 266 QGTKTDLLKC 275
>gi|387015674|gb|AFJ49956.1| Transcription elongation factor A protein 1 [Crotalus adamanteus]
Length = 304
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAFSK----VAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 140 SDSVRMKCREMLAAALKTGDDYIAIGADEEELGSQIE--EAIFQELKNTDMKYKNRVRSR 197
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 198 IANLKDTKNPNLRKNVLCGNILPDRFAKMTAEEMASDELKEMRKNLTKEA---IREHQMA 254
>gi|242025624|ref|XP_002433224.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518765|gb|EEB20486.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 2246
Score = 43.9 bits (102), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 30/101 (29%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNM------------ 162
R +++ LAE E ++ME E+ D +++ +E LFK+
Sbjct: 1123 RESVKKTLAETLKVRVQECKDMEYNEE--HID--NLSIKIEEKLFKHFENKVDTKYKSKY 1178
Query: 163 CPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KDPKN ++K++ + P+ LV PEE+AS E
Sbjct: 1179 RSLIFNIKDPKNETLYKKIVDNLISPKDLVKLSPEELASQE 1219
>gi|126342513|ref|XP_001362316.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 43.9 bits (102), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 116 SDSVRMKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQELRNTDMKYKNRVRSR 173
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 174 IANLKDAKNPNLRKNVLCGNIPPDLFARLTAEEMASDELKEMRKNLTKEA---IREHQMA 230
>gi|384484057|gb|EIE76237.1| transcription elongation factor S-II [Rhizopus delemar RA 99-880]
Length = 304
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
N+K NP V+ GE+ E L T EEMAS+E Q+R++++ E+AL K R
Sbjct: 200 NLKSKSNPGLRESVVSGELTIEKLCTMSVEEMASEEAQARDRKLAEEALFKAR 252
>gi|194207770|ref|XP_001916902.1| PREDICTED: LOW QUALITY PROTEIN: SPOC domain-containing protein 1
[Equus caballus]
Length = 1162
Score = 43.5 bits (101), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 11/55 (20%)
Query: 149 GVAVSVESVLF----KNMCPF-------LFNVKDPKNPDFWRKVLLGEVKPETLV 192
G+A +E+ LF C + LFN++DP+NPD + KV+ G+V P+ LV
Sbjct: 565 GIAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGDVTPQGLV 619
>gi|67968616|dbj|BAE00667.1| unnamed protein product [Macaca fascicularis]
Length = 117
Score = 43.5 bits (101), Expect = 0.063, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 33/58 (56%), Gaps = 3/58 (5%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 13 NLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 67
>gi|427779725|gb|JAA55314.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 1186
Score = 43.5 bits (101), Expect = 0.064, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 16/85 (18%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE------- 213
+FN+KD +N +RK+L G++ P+ LV PEE+AS E R+ NK E
Sbjct: 1075 LVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENKHTIEMIKKEQM 1134
Query: 214 DALAKIRDHSVV-----GEKELECD 233
+A + H+++ GE E++ D
Sbjct: 1135 EAAQNVSSHALLKKTHKGEVEIDDD 1159
>gi|195475592|ref|XP_002090068.1| GE19417 [Drosophila yakuba]
gi|194176169|gb|EDW89780.1| GE19417 [Drosophila yakuba]
Length = 313
Score = 43.5 bits (101), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 40/130 (30%), Positives = 61/130 (46%), Gaps = 12/130 (9%)
Query: 111 SDATRTLIRERLAEAFS-----KVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN-MCP 164
+DA R RE LA A + GE EEM + + D + + +KN +
Sbjct: 150 TDAVRIKCREMLAAALKIGEVPEGCGEPEEMAAELE----DAIYSEFKNTDMKYKNRIRS 205
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V
Sbjct: 206 RVANLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATV 265
Query: 225 VGEKE--LEC 232
G K L+C
Sbjct: 266 QGTKTDLLKC 275
>gi|395511158|ref|XP_003759828.1| PREDICTED: transcription elongation factor A protein 1 [Sarcophilus
harrisii]
Length = 349
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 185 SDSVRMKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQELRNTDMKYKNRVRSR 242
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 243 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 299
>gi|427788339|gb|JAA59621.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2019
Score = 43.5 bits (101), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 16/85 (18%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE------- 213
+FN+KD +N +RK+L G++ P+ LV PEE+AS E R+ NK E
Sbjct: 1031 LVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENKHTIEMIKKEQM 1090
Query: 214 DALAKIRDHSVV-----GEKELECD 233
+A + H+++ GE E++ D
Sbjct: 1091 EAAQNVSSHALLKKTHKGEVEIDDD 1115
>gi|114620133|ref|XP_528135.2| PREDICTED: transcription elongation factor A protein 1 isoform 5
[Pan troglodytes]
gi|397505489|ref|XP_003823293.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Pan paniscus]
gi|410212656|gb|JAA03547.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251522|gb|JAA13728.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298812|gb|JAA28006.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341539|gb|JAA39716.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 301
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEMRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 251
>gi|114620135|ref|XP_001151569.1| PREDICTED: transcription elongation factor A protein 1 isoform 3
[Pan troglodytes]
gi|397505491|ref|XP_003823294.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Pan paniscus]
gi|410212654|gb|JAA03546.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410251520|gb|JAA13727.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410298810|gb|JAA28005.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
gi|410341537|gb|JAA39715.1| transcription elongation factor A (SII), 1 [Pan troglodytes]
Length = 280
Score = 43.5 bits (101), Expect = 0.070, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEMRNTDMKYKNRVRSR 173
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 174 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 230
>gi|427788337|gb|JAA59620.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2031
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 16/85 (18%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE------- 213
+FN+KD +N +RK+L G++ P+ LV PEE+AS E R+ NK E
Sbjct: 1043 LVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENKHTIEMIKKEQM 1102
Query: 214 DALAKIRDHSVV-----GEKELECD 233
+A + H+++ GE E++ D
Sbjct: 1103 EAAQNVSSHALLKKTHKGEVEIDDD 1127
>gi|224046246|ref|XP_002197689.1| PREDICTED: transcription elongation factor A protein 1 isoform 1
[Taeniopygia guttata]
Length = 304
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 198 IANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEA---IREHQMA 254
>gi|57530393|ref|NP_001006387.1| transcription elongation factor A protein 1 [Gallus gallus]
gi|53136812|emb|CAG32735.1| hypothetical protein RCJMB04_34f23 [Gallus gallus]
Length = 304
Score = 43.5 bits (101), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 198 IANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEA---IREHQMA 254
>gi|432908156|ref|XP_004077781.1| PREDICTED: transcription elongation factor A protein 3-like
[Oryzias latipes]
Length = 520
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 39/121 (32%), Positives = 57/121 (47%), Gaps = 16/121 (13%)
Query: 113 ATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAV--------SVESVLFKNMC- 163
AT IR++ E + A + + KE CD +G + + +KN
Sbjct: 354 ATGDSIRDKCIEMLA--AALRTDDDHKEFGVNCDSMGAEIEDYIYQEIKATDMKYKNRVR 411
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAK 218
+ N+KDPKNP R VL G ++ + + EEMASDE +Q RN + IRE +AK
Sbjct: 412 SRISNLKDPKNPGLRRNVLAGSIELSRIASMSAEEMASDELKQLRNVLTQEAIREHQMAK 471
Query: 219 I 219
Sbjct: 472 T 472
>gi|344272860|ref|XP_003408247.1| PREDICTED: transcription elongation factor A protein 1-like
[Loxodonta africana]
Length = 380
Score = 43.5 bits (101), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 35/125 (28%), Positives = 59/125 (47%), Gaps = 10/125 (8%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
T+ +V +KC R +I L +A +E E Q+ + + + + +KN
Sbjct: 150 TSDSVRLKC----REMIAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKN 203
Query: 162 MC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIR 220
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR
Sbjct: 204 RVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IR 260
Query: 221 DHSVV 225
+H +
Sbjct: 261 EHQMA 265
>gi|338728315|ref|XP_001489456.3| PREDICTED: transcription elongation factor A protein 1-like [Equus
caballus]
Length = 409
Score = 43.5 bits (101), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 202 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 259
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 260 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 316
>gi|339245691|ref|XP_003374479.1| transcription elongation factor S-II [Trichinella spiralis]
gi|316972266|gb|EFV55949.1| transcription elongation factor S-II [Trichinella spiralis]
Length = 347
Score = 43.5 bits (101), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 36/62 (58%), Gaps = 3/62 (4%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+FN++D KNPD R VL GE+ L T EEMAS+ ++ ++ ++A I +H V
Sbjct: 241 VFNLRDKKNPDLKRSVLSGEITAIRLATMTSEEMASEALKAARRKFTKEA---IEEHQVA 297
Query: 226 GE 227
E
Sbjct: 298 QE 299
>gi|348570704|ref|XP_003471137.1| PREDICTED: SPOC domain-containing protein 1-like [Cavia porcellus]
Length = 1143
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 34/66 (51%), Gaps = 11/66 (16%)
Query: 149 GVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPE 197
G+A +E+ LF M LFN++DP+NPD + KV+ G V P LV
Sbjct: 564 GIAADIEAALFDLMQGTTYRYKTKYRTLLFNLRDPRNPDLFLKVVHGNVTPHDLVRMSSV 623
Query: 198 EMASDE 203
++AS E
Sbjct: 624 QLASQE 629
>gi|449494108|ref|XP_004175278.1| PREDICTED: transcription elongation factor A protein 1 isoform 2
[Taeniopygia guttata]
Length = 267
Score = 43.5 bits (101), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 161 IANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEA---IREHQMA 217
>gi|427780239|gb|JAA55571.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 2067
Score = 43.5 bits (101), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 45/85 (52%), Gaps = 16/85 (18%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE------- 213
+FN+KD +N +RK+L G++ P+ LV PEE+AS E R+ NK E
Sbjct: 1043 LVFNIKDSRNQGLFRKILRGKIAPDRLVRMTPEELASKELARWREQENKHTIEMIKKEQM 1102
Query: 214 DALAKIRDHSVV-----GEKELECD 233
+A + H+++ GE E++ D
Sbjct: 1103 EAAQNVSSHALLKKTHKGEVEIDDD 1127
>gi|240277967|gb|EER41474.1| PHD finger domain-containing protein [Ajellomyces capsulatus H143]
Length = 851
Score = 43.5 bits (101), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC------- 163
++A L E+ A A + A + + KE V + V++E ++K++C
Sbjct: 288 ANALVKLFVEQAASALQQGAYSMPAGKTKEAVGEA----LGVAIEHAMYKHLCGGSGEPS 343
Query: 164 --------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
LFNV+ KN +L+G + P+TL T ++MAS E + ++ +I+ +A
Sbjct: 344 EAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKREA 401
Query: 216 LAKIRDHSVVGEK 228
R H ++ E+
Sbjct: 402 E---RQHMIIQEQ 411
>gi|345306840|ref|XP_001514566.2| PREDICTED: transcription elongation factor A protein 1-like
[Ornithorhynchus anatinus]
Length = 291
Score = 43.1 bits (100), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 185 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 241
>gi|428183038|gb|EKX51897.1| hypothetical protein GUITHDRAFT_102510 [Guillardia theta CCMP2712]
Length = 298
Score = 43.1 bits (100), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 30/116 (25%), Positives = 53/116 (45%), Gaps = 21/116 (18%)
Query: 112 DATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCP----FL- 166
D R +RE +AF+ GE + D ++ +ES ++++ +L
Sbjct: 126 DGKRLKVRELFEKAFADWKGESD----------VDRKDLSARIESAMYEHFGGANEQYLN 175
Query: 167 ------FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
FN+ DPKNPDF KV+ G++ E + +MA ++ + K +ED +
Sbjct: 176 HAKSVKFNLSDPKNPDFRSKVIFGDIDAEEIPKLSSGQMAGKDKIEQKKANKEDKI 231
>gi|126342555|ref|XP_001362914.1| PREDICTED: transcription elongation factor A protein 1-like isoform
1 [Monodelphis domestica]
Length = 301
Score = 43.1 bits (100), Expect = 0.088, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRMKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQELRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 195 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEIRKNLTKEA---IREHQMA 251
>gi|126342557|ref|XP_001363001.1| PREDICTED: transcription elongation factor A protein 1-like isoform
2 [Monodelphis domestica]
Length = 280
Score = 43.1 bits (100), Expect = 0.090, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 116 SDSVRMKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQELRNTDMKYKNRVRSR 173
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 174 IANLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEIRKNLTKEA---IREHQMA 230
>gi|225557325|gb|EEH05611.1| conserved hypothetical protein [Ajellomyces capsulatus G186AR]
Length = 892
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC------- 163
++A L E+ A A + A + + KE V + V++E ++K++C
Sbjct: 288 ANALVKLFVEQAASALQQGAYSMPAGKTKEAVGEA----LGVAIEHAMYKHLCGGSGEPS 343
Query: 164 --------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
LFNV+ KN +L+G + P+TL T ++MAS E + ++ +I+ +A
Sbjct: 344 EAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKREA 401
Query: 216 LAKIRDHSVVGEK 228
R H ++ E+
Sbjct: 402 E---RQHMIIQEQ 411
>gi|440909134|gb|ELR59079.1| Transcription elongation factor A protein 1, partial [Bos grunniens
mutus]
Length = 289
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 59/129 (45%), Gaps = 18/129 (13%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVL-------- 158
SD+ R RE LA A +A +E E Q+ D + V + + +
Sbjct: 116 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIEE-DILCVYIHIVPIYQEIRNTDM 174
Query: 159 -FKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+KN + N+KD KNP+ + VL G + P+ EEMASDE + K + ++A
Sbjct: 175 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA- 233
Query: 217 AKIRDHSVV 225
IR+H +
Sbjct: 234 --IREHQMA 240
>gi|431891151|gb|ELK02028.1| SPOC domain-containing protein 1 [Pteropus alecto]
Length = 1093
Score = 43.1 bits (100), Expect = 0.091, Method: Compositional matrix adjust.
Identities = 42/157 (26%), Positives = 68/157 (43%), Gaps = 37/157 (23%)
Query: 77 DQAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEM 136
D+ P M K L Q QP Q K +E++ T++R +S++ E ++
Sbjct: 523 DEPGGPDMGKDLAQLQP----QQEKPPLDIEVR-----GTVVRAMQEVLWSRLL-EFPDL 572
Query: 137 EKKEQVRACDPVGVAVSVESVLF----KNMCPF-------LFNVKDPKNPDFWRKVLLGE 185
E+V +A +E+ LF C + LFN++DP+NPD + KV+ G+
Sbjct: 573 VLSEEVVE----SIAAGIEAALFDLTQATNCRYKTKYRSLLFNLRDPRNPDLFLKVVHGD 628
Query: 186 VKPETLVTALPEEMASDERQSRNKQIREDALAKIRDH 222
+ P LV Q + Q+ LA+ RD
Sbjct: 629 ITPHGLV------------QMSSMQLAPQELARWRDQ 653
>gi|325096028|gb|EGC49338.1| PHD finger domain-containing protein [Ajellomyces capsulatus H88]
Length = 896
Score = 43.1 bits (100), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC------- 163
++A L E+ A A + A + + KE V + V++E ++K++C
Sbjct: 288 ANALVKLFVEQAASALQQGAYSMPAGKTKEAVGEA----LGVAIEHAMYKHLCGGSGEPS 343
Query: 164 --------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
LFNV+ KN +L+G + P+TL T ++MAS E + ++ +I+ +A
Sbjct: 344 EAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKREA 401
Query: 216 LAKIRDHSVVGEK 228
R H ++ E+
Sbjct: 402 E---RQHMIIQEQ 411
>gi|118100673|ref|XP_417425.2| PREDICTED: transcription elongation factor A protein 2 [Gallus
gallus]
Length = 300
Score = 43.1 bits (100), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 194 ISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQMA 250
>gi|348544613|ref|XP_003459775.1| PREDICTED: transcription elongation factor A protein 2-like
[Oreochromis niloticus]
Length = 308
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 39/70 (55%), Gaps = 9/70 (12%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK--IRDH- 222
+ N+KD KNP+ R VL G + P + EEMAS E KQ+RE AL K IR+H
Sbjct: 197 ISNLKDQKNPELRRNVLCGNISPHRIACMTAEEMASAEL----KQMRE-ALTKESIREHQ 251
Query: 223 -SVVGEKELE 231
S VG E +
Sbjct: 252 LSKVGGTETD 261
>gi|348529301|ref|XP_003452152.1| PREDICTED: hypothetical protein LOC100695418 [Oreochromis
niloticus]
Length = 620
Score = 43.1 bits (100), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 35/59 (59%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP + VL G ++ + T EEMASDE +Q RN + IRE +AK
Sbjct: 514 ISNLKDPKNPGLRKNVLAGSIELRRIATMSAEEMASDELKQLRNVLTQEAIREHQMAKT 572
>gi|197129381|gb|ACH45879.1| putative transcription elongation factor A2 [Taeniopygia guttata]
Length = 300
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 194 ISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQMA 250
>gi|148223439|ref|NP_001081812.1| transcription elongation factor A (SII), 3 [Xenopus laevis]
gi|1373400|gb|AAC60115.1| transcription elongation factor type xTFIIS.l [Xenopus laevis]
gi|46249530|gb|AAH68738.1| LOC398066 protein [Xenopus laevis]
Length = 292
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KD KNPD + VL G + PE + EEMAS+E + K+I + A I++H +
Sbjct: 186 ISNLKDSKNPDLRKNVLCGIITPEQIAIMSCEEMASNELKEMRKEITK---ASIQEHQM 241
>gi|449274195|gb|EMC83478.1| Transcription elongation factor A protein 2, partial [Columba
livia]
Length = 282
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 178 ISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQMA 234
>gi|326931955|ref|XP_003212089.1| PREDICTED: transcription elongation factor A protein 2-like
[Meleagris gallopavo]
Length = 274
Score = 43.1 bits (100), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 168 ISNLKDSKNPELKKNVLCGAITPEQIAVMTSEEMASNELKEIRKAMTKEA---IREHQMA 224
>gi|426236089|ref|XP_004012007.1| PREDICTED: transcription elongation factor A protein 1 [Ovis aries]
Length = 313
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 207 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 263
>gi|326917624|ref|XP_003205096.1| PREDICTED: transcription elongation factor A protein 1-like
[Meleagris gallopavo]
Length = 335
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 198 IANLKDAKNPNLRKNVLCGNIPPDKFAKMTAEEMASDELKEMRKNLTKEA---IREHQMA 254
>gi|291399294|ref|XP_002716071.1| PREDICTED: KIAA1710 protein-like [Oryctolagus cuniculus]
Length = 789
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDP+NP R VL G + + EEMASDE R+ RN + IRE +AK
Sbjct: 105 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 163
>gi|327276421|ref|XP_003222968.1| PREDICTED: transcription elongation factor A protein 2-like [Anolis
carolinensis]
Length = 209
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
N+KD KNPD + VL G + PE + EEMAS+E + K + ++A IR+H +
Sbjct: 101 NLKDSKNPDLRKNVLCGVITPEEIAVMTSEEMASNELKEIWKAMTKEA---IREHQM 154
>gi|351700633|gb|EHB03552.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 343
Score = 42.7 bits (99), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KD KNP R VL G + E + + EEMASDE R+ RN +E IR+H +
Sbjct: 237 ISNLKDSKNPGLRRNVLSGAISTELIAKMMAEEMASDELRELRNAMTQE----AIREHQM 292
Query: 225 V 225
Sbjct: 293 A 293
>gi|119470088|ref|XP_001258016.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
gi|119406168|gb|EAW16119.1| PHD finger domain protein, putative [Neosartorya fischeri NRRL 181]
Length = 884
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 50/94 (53%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ S+E +++N+C P+ LFNVK KNP ++L+G + P+ L
Sbjct: 326 LGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSKM 383
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 384 SSQDMASEELQQKDAEIKREAE---RQHIIVEEQ 414
>gi|380807497|gb|AFE75624.1| transcription elongation factor A protein 3, partial [Macaca
mulatta]
Length = 155
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 83 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 138
Query: 225 V 225
Sbjct: 139 A 139
>gi|409075972|gb|EKM76347.1| hypothetical protein AGABI1DRAFT_45124 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 293
Score = 42.7 bits (99), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
N+KD NP F V+ G+V E L E+MAS+ER++ +++I+E+ L K
Sbjct: 186 LFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFK 239
>gi|426192898|gb|EKV42833.1| hypothetical protein AGABI2DRAFT_195610 [Agaricus bisporus var.
bisporus H97]
Length = 293
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 33/54 (61%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
N+KD NP F V+ G+V E L E+MAS+ER++ +++I+E+ L K
Sbjct: 186 LFVNLKDKNNPGFRENVISGDVPVEKLAKMTSEDMASEERKAADRKIKEENLFK 239
>gi|224143046|ref|XP_002324832.1| predicted protein [Populus trichocarpa]
gi|222866266|gb|EEF03397.1| predicted protein [Populus trichocarpa]
Length = 633
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/82 (36%), Positives = 41/82 (50%), Gaps = 13/82 (15%)
Query: 133 VEEMEKKEQVRACDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKV 181
++E KE VR DP +A +E+ LFK LFN+KD NP+ KV
Sbjct: 269 IDEYVGKEVVR--DPRVLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRNNPELREKV 326
Query: 182 LLGEVKPETLVTALPEEMASDE 203
+ GE+ P L + EE+AS E
Sbjct: 327 MSGEIPPGRLCSMTAEELASKE 348
>gi|348583099|ref|XP_003477312.1| PREDICTED: transcription elongation factor A protein 3-like [Cavia
porcellus]
Length = 347
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 34/61 (55%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP R VL G + + + EEMASDE ++ RN +E IR+H +
Sbjct: 241 ISNLKDPKNPGLRRNVLSGAISTGLIAKMMAEEMASDELKELRNAMTQE----AIREHQM 296
Query: 225 V 225
Sbjct: 297 A 297
>gi|208968915|dbj|BAG74296.1| Transcription elongation factor A protein 1 [synthetic construct]
Length = 284
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 61/129 (47%), Gaps = 18/129 (13%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESV 157
T+ +V++KC RE LA A +A +E E Q+ + + + +
Sbjct: 119 TSDSVQLKC--------REMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDM 168
Query: 158 LFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+KN + N+KD KNP+ + VL G + P+ EEMASDE + K + ++A
Sbjct: 169 KYKNRVRSRISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKEA- 227
Query: 217 AKIRDHSVV 225
IR+H +
Sbjct: 228 --IREHQMA 234
>gi|354488913|ref|XP_003506610.1| PREDICTED: transcription elongation factor A protein 1-like
[Cricetulus griseus]
Length = 318
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/120 (30%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFL 166
SD+ R RE LA A VA +E E Q+ + + + + +KN
Sbjct: 154 SDSVRLKCREMLAAALRTGDDYVAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 211
Query: 167 FNV-KDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+V KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 212 ISVPKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 268
>gi|301619923|ref|XP_002939342.1| PREDICTED: hypothetical protein LOC100497807 [Xenopus (Silurana)
tropicalis]
Length = 392
Score = 42.7 bits (99), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KDP N +R+++LGE+ P+ L + EMA DE
Sbjct: 287 ILFNLKDPNNKVLFRRLVLGEITPQHLASLSSTEMAGDE 325
>gi|410901489|ref|XP_003964228.1| PREDICTED: PHD finger protein 3-like [Takifugu rubripes]
Length = 1448
Score = 42.7 bits (99), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN ++KVL GE+ P L+ PEE+AS E
Sbjct: 713 LMFNLKDTKNNVLYKKVLKGEISPGNLIRMSPEELASKE 751
>gi|241063664|ref|XP_002408196.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
gi|215492398|gb|EEC02039.1| hypothetical protein IscW_ISCW000551 [Ixodes scapularis]
Length = 1507
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%), Gaps = 4/56 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIREDAL 216
+FN+KD +N +RK+L G++ P+ LV PEE+AS E R+ N+ + L
Sbjct: 870 LVFNIKDTRNQGLFRKILKGKIAPDKLVRMTPEELASKELAKWRERENQHVAPPPL 925
>gi|320039752|gb|EFW21686.1| hypothetical protein CPSG_01843 [Coccidioides posadasii str.
Silveira]
Length = 848
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 29/158 (18%)
Query: 94 PKQEQDRKTASAVEIKCSDATR-TLIRERLAEAFSKV----AGEVEEMEK--KEQVRACD 146
P + + S E S AT T R+ +A A K+ AG +E K + R +
Sbjct: 253 PTTHGAKTSKSPTEATASGATTLTQARKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKE 312
Query: 147 PVG--VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPE 189
VG + ++E +++N+C P+ LFNV+ KNP +L+G + P+
Sbjct: 313 SVGEYLGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPD 370
Query: 190 TLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
++MAS+E + R+ +I+ +A R H ++ E
Sbjct: 371 AFSKMSTQDMASEELRQRDDEIKREAE---RQHIIIQE 405
>gi|348560474|ref|XP_003466038.1| PREDICTED: transcription elongation factor A protein 1-like [Cavia
porcellus]
Length = 425
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 57/120 (47%), Gaps = 10/120 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 234 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 291
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 292 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQMA 348
>gi|154274572|ref|XP_001538137.1| predicted protein [Ajellomyces capsulatus NAm1]
gi|150414577|gb|EDN09939.1| predicted protein [Ajellomyces capsulatus NAm1]
Length = 892
Score = 42.4 bits (98), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 34/133 (25%), Positives = 63/133 (47%), Gaps = 24/133 (18%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC------- 163
++A L E+ A A + A + + KE V + V++E ++K++C
Sbjct: 288 ANALVKLFVEQAASALQQGAYSMPAGKTKEAVGEA----LGVAIEHSMYKHLCGGSGEPS 343
Query: 164 --------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
LFNV+ KN +L+G + P+TL T ++MAS E + ++ +I+ +A
Sbjct: 344 EAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDTLATMSTQDMASKELRQKDDEIKREA 401
Query: 216 LAKIRDHSVVGEK 228
R H ++ E+
Sbjct: 402 E---RQHMIIQEQ 411
>gi|303311679|ref|XP_003065851.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
gi|240105513|gb|EER23706.1| Transcription factor S-II , central domain containing protein
[Coccidioides posadasii C735 delta SOWgp]
Length = 848
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 42/158 (26%), Positives = 73/158 (46%), Gaps = 29/158 (18%)
Query: 94 PKQEQDRKTASAVEIKCSDATR-TLIRERLAEAFSKV----AGEVEEMEK--KEQVRACD 146
P + + S E S AT T R+ +A A K+ AG +E K + R +
Sbjct: 253 PTTHGAKTSKSPTEATASGATTLTQARKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKE 312
Query: 147 PVG--VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPE 189
VG + ++E +++N+C P+ LFNV+ KNP +L+G + P+
Sbjct: 313 SVGEYLGFAIEQAMYQNLCGGSGEPNDPYRQQMRTILFNVR--KNPSLRDSLLVGRITPD 370
Query: 190 TLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
++MAS+E + R+ +I+ +A R H ++ E
Sbjct: 371 AFSKMSTQDMASEELRQRDDEIKREAE---RQHIIIQE 405
>gi|348570796|ref|XP_003471183.1| PREDICTED: zinc finger protein 436-like [Cavia porcellus]
Length = 856
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 33/59 (55%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDP+NP R VL G + + EEMASDE R+ RN + IRE +AK
Sbjct: 247 ISNLKDPRNPGLRRNVLSGAISSGLIAKMTAEEMASDELRELRNAMTQEAIREHQMAKT 305
>gi|328709087|ref|XP_001946550.2| PREDICTED: hypothetical protein LOC100167834 [Acyrthosiphon pisum]
Length = 1750
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 26/39 (66%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KDPKN +F++K++ V P LV +EMAS E
Sbjct: 1047 LLFNIKDPKNLNFFKKIMFKWVTPYQLVRMTADEMASQE 1085
>gi|67522641|ref|XP_659381.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|40744797|gb|EAA63953.1| hypothetical protein AN1777.2 [Aspergillus nidulans FGSC A4]
gi|259487122|tpe|CBF85543.1| TPA: PHD finger domain protein, putative (AFU_orthologue;
AFUA_6G09000) [Aspergillus nidulans FGSC A4]
Length = 889
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 28/95 (29%), Positives = 48/95 (50%), Gaps = 21/95 (22%)
Query: 150 VAVSVESVLFKNMC----------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVT 193
+ +SVE L++N+ LFNVK KNP ++L+G + P+ L
Sbjct: 324 LGISVEEALYQNLMGGGGEATSEAYKIQLRAILFNVK--KNPSLRDRLLVGSLTPDALSR 381
Query: 194 ALPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
+EMAS+E Q ++ +I+ +A R H ++ E+
Sbjct: 382 MSSQEMASEELQQKDAEIKREAE---RQHMIIQEQ 413
>gi|321468633|gb|EFX79617.1| hypothetical protein DAPPUDRAFT_244816 [Daphnia pulex]
Length = 2274
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 49/101 (48%), Gaps = 16/101 (15%)
Query: 112 DATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLF-----------K 160
+ATR++ R L EA E ++E E + VA +E LF K
Sbjct: 1706 EATRSISRSSLKEALWSRCKEANDVETDEAIVE----QVAKEIEESLFSLYKHDVGSKYK 1761
Query: 161 NMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMA 200
N +FN+KDPKNP +R+++ ++ P+ LV E++A
Sbjct: 1762 NKYRSLIFNIKDPKNPGLFREIITKQLLPDELVKMSTEDLA 1802
>gi|195030242|ref|XP_001987977.1| GH10818 [Drosophila grimshawi]
gi|193903977|gb|EDW02844.1| GH10818 [Drosophila grimshawi]
Length = 350
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 16/131 (12%)
Query: 112 DATRTLIRERLAEAFSKVAGEV-------EEMEKKEQVRACDPVGVAVSVESVLFKN-MC 163
DA R RE LA A GEV EEM + + D + + + +KN +
Sbjct: 188 DAVRLKCREMLATALK--MGEVPDGCAEPEEMAAELE----DAIYMEFKNTDMKYKNRIR 241
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHS 223
+ N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +
Sbjct: 242 SRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLAT 301
Query: 224 VVGEKE--LEC 232
V G K L+C
Sbjct: 302 VQGTKTDLLKC 312
>gi|62858793|ref|NP_001016290.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|89266837|emb|CAJ83973.1| transcription elongation factor A (SII), 2 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF----- 165
SD+ RT RE L A V D +A +E V+F M
Sbjct: 128 SDSVRTKCREMLRAALQTDGDHV--------AIGADCEFLAAQIEEVVFGEMQNTDMKYK 179
Query: 166 ------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKI 219
+ N+KD KNPD + VL G + PE + EEMAS+E + K + + A I
Sbjct: 180 NRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNELKEMRKAMTK---AAI 236
Query: 220 RDHSV 224
++H +
Sbjct: 237 QEHQM 241
>gi|406699653|gb|EKD02852.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 8904]
Length = 317
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 162 MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRD 221
M N+KD NP +++LG+V P+ +V EEMAS+ + N+++ E L K +
Sbjct: 208 MRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEEMASESVRLLNEKLAEKNLFKAK- 266
Query: 222 HSVVGEKELECDA 234
VG + E DA
Sbjct: 267 --AVGVTQAETDA 277
>gi|213624443|gb|AAI71109.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
gi|213627306|gb|AAI71083.1| transcription elongation factor A (SII), 3 [Xenopus (Silurana)
tropicalis]
Length = 292
Score = 42.4 bits (98), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 37/125 (29%), Positives = 53/125 (42%), Gaps = 22/125 (17%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPF----- 165
SD+ RT RE L A V D +A +E V+F M
Sbjct: 128 SDSVRTKCREMLRAALQTDGDHV--------AIGADCEFLAAQIEEVVFGEMQNTDMKYK 179
Query: 166 ------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKI 219
+ N+KD KNPD + VL G + PE + EEMAS+E + K + + A I
Sbjct: 180 NRIRSRISNLKDSKNPDLRKNVLCGVIGPEQIAVMSCEEMASNELKEMRKAMTK---AAI 236
Query: 220 RDHSV 224
++H +
Sbjct: 237 QEHQM 241
>gi|444707355|gb|ELW48637.1| SPOC domain-containing protein 1 [Tupaia chinensis]
Length = 694
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/71 (35%), Positives = 35/71 (49%), Gaps = 15/71 (21%)
Query: 132 EVEEMEKKEQVRACDPVGVAVSVESVLF-----------KNMCPFLFNVKDPKNPDFWRK 180
E+ E+ E+V G+A VE+ LF LFN++DP+NPD + K
Sbjct: 119 ELPELALSEEVVG----GIAAGVEAALFDLTQGTQGRYKAKYRSLLFNLRDPRNPDLFLK 174
Query: 181 VLLGEVKPETL 191
VL G+V P L
Sbjct: 175 VLHGDVTPHDL 185
>gi|45387785|ref|NP_991246.1| transcription elongation factor A protein 3 [Danio rerio]
gi|41107560|gb|AAH65444.1| Transcription elongation factor A (SII), 3 [Danio rerio]
Length = 409
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 36/59 (61%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP+ + VL G ++ + + EEMASDE +Q RN + IRE +AK
Sbjct: 303 ISNLKDPKNPNLRKNVLAGAIELSRIASMTAEEMASDELKQLRNVLTQEAIREHQMAKT 361
>gi|121699592|ref|XP_001268072.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
gi|119396214|gb|EAW06646.1| PHD finger domain protein, putative [Aspergillus clavatus NRRL 1]
Length = 853
Score = 42.4 bits (98), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 49/94 (52%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ +S+E +++N+C LFNVK KNP ++L+G + P+ L
Sbjct: 294 LGLSIEKAMYQNICGGSGEPTEAYKLQLRTVLFNVK--KNPSLRDRLLVGSLLPDKLSQM 351
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E Q ++ +I+ +A R H +V E+
Sbjct: 352 SSQDMASEELQQKDAEIKREAE---RQHIIVQEQ 382
>gi|431894648|gb|ELK04448.1| Transcription elongation factor A protein 2 [Pteropus alecto]
Length = 269
Score = 42.4 bits (98), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 3/58 (5%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
N+KD KNP R+VL G + P+ + EEMASDE + K + ++A IR+H +
Sbjct: 13 NLKDAKNPGLRRQVLCGSITPQQIAVMTSEEMASDELKEIRKAMTKEA---IREHQMA 67
>gi|440804552|gb|ELR25429.1| transcription elongation factor SII, hS-II-T1 isoform 8, putative
[Acanthamoeba castellanii str. Neff]
Length = 188
Score = 42.0 bits (97), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 35/120 (29%), Positives = 51/120 (42%), Gaps = 23/120 (19%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFK------- 160
IK +DATR E LAEA + + + E +A+ +E+ +FK
Sbjct: 26 IKLNDATRQKCFEMLAEALEQSESDADYFE------------LALDIEAEMFKLFGETNP 73
Query: 161 ----NMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
N+K+ KN D VL G + PE L +E+AS E Q + K + E L
Sbjct: 74 NYKAKFRQLFMNLKNVKNHDLRLGVLNGHISPERLCQMTSQELASKELQEQRKALEEACL 133
>gi|294880257|ref|XP_002768947.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
gi|239871976|gb|EER01665.1| transcription elongation factor s-ii, putative [Perkinsus marinus
ATCC 50983]
Length = 621
Score = 42.0 bits (97), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/41 (46%), Positives = 27/41 (65%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSR 207
FN+ DP+N R+VL GE+ P+ LVTA +E+ SD + R
Sbjct: 379 FNLSDPQNASLRRRVLTGEMSPQHLVTASHDELGSDSLKKR 419
>gi|194760841|ref|XP_001962641.1| GF15561 [Drosophila ananassae]
gi|190616338|gb|EDV31862.1| GF15561 [Drosophila ananassae]
Length = 315
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRAC-DPVGVAVSVESVL---FKN----- 161
+DA R RE L A GEV E C +P +A +E + FKN
Sbjct: 152 TDAVRLKCREMLTTALK--MGEVPE--------GCAEPEEMAAELEDAIYAEFKNTDMKY 201
Query: 162 ---MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
+ + N+KDPKNP + G V + L PEEMASDE + ++ ++A+
Sbjct: 202 KNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAIND 261
Query: 219 IRDHSVVGEKE--LEC 232
+ +V G K L+C
Sbjct: 262 AQLATVQGTKTDLLKC 277
>gi|417399424|gb|JAA46727.1| Putative transcription elongation factor a protein [Desmodus
rotundus]
Length = 350
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 244 ISNLKDPRNPGLRRNVLSGAISTGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 299
Query: 225 V 225
Sbjct: 300 A 300
>gi|401887634|gb|EJT51614.1| positive transcription elongation factor [Trichosporon asahii var.
asahii CBS 2479]
Length = 300
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%), Gaps = 3/73 (4%)
Query: 162 MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRD 221
M N+KD NP +++LG+V P+ +V EEMAS+ + N+++ E L K +
Sbjct: 201 MRSLFLNIKDKGNPGLRNEIVLGQVTPDKVVRMSKEEMASESVRLLNEKLAEKNLFKAK- 259
Query: 222 HSVVGEKELECDA 234
VG + E DA
Sbjct: 260 --AVGVTQAETDA 270
>gi|322786324|gb|EFZ12874.1| hypothetical protein SINV_06958 [Solenopsis invicta]
Length = 113
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N++D KNP+ L+G + P L EEMASDE + +Q +++A+ + +V G
Sbjct: 9 NLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGT 68
Query: 228 K 228
K
Sbjct: 69 K 69
>gi|195115581|ref|XP_002002335.1| GI17330 [Drosophila mojavensis]
gi|193912910|gb|EDW11777.1| GI17330 [Drosophila mojavensis]
Length = 323
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 61/136 (44%), Gaps = 24/136 (17%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRAC-DPVGVAVSVESVL---FKN----- 161
+DA R RE L A GEV E C +P +A +E + FKN
Sbjct: 160 TDAVRLKCREMLTNALK--IGEVPE--------GCAEPEEMAAELEDAIYSEFKNTDMKY 209
Query: 162 ---MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
+ + N+KDPKNP + G V + L PEEMASDE + ++ ++A+
Sbjct: 210 KNRIRSRVANLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAIND 269
Query: 219 IRDHSVVGEKE--LEC 232
+ +V G K L+C
Sbjct: 270 AQLATVQGTKTDLLKC 285
>gi|84497017|ref|ZP_00995839.1| hypothetical protein JNB_12523 [Janibacter sp. HTCC2649]
gi|84381905|gb|EAP97787.1| hypothetical protein JNB_12523 [Janibacter sp. HTCC2649]
Length = 562
Score = 42.0 bits (97), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 36/111 (32%), Positives = 50/111 (45%), Gaps = 14/111 (12%)
Query: 116 TLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFNVKDPKNP 175
+ +RE AG+V ++ + VA SV L+ P DP+ P
Sbjct: 88 SWVREHAPSLRQDGAGQVAQLAQA----------VACSVPGGLWSTAGPSAGAYADPERP 137
Query: 176 D--FWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ W +VL GEV P +TAL +EMA E Q R + + A A I DH V
Sbjct: 138 EGVVWARVLTGEVGPALALTAL-KEMAKLEDQLRPEAVPTVADA-ILDHGV 186
>gi|73950631|ref|XP_535363.2| PREDICTED: transcription elongation factor A protein 3 [Canis lupus
familiaris]
Length = 348
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 242 ISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|349802183|gb|AEQ16564.1| putative transcription elongation factor a protein 1 [Pipa
carvalhoi]
Length = 208
Score = 42.0 bits (97), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 3/60 (5%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N+KD KNP+ R VL G + + EEMASDE + K + ++A IR+H +
Sbjct: 112 IANLKDAKNPNLRRNVLCGNIATDRFARMSAEEMASDELKEMRKNLTKEA---IREHQMA 168
>gi|432905920|ref|XP_004077476.1| PREDICTED: PHD finger protein 3-like [Oryzias latipes]
Length = 1575
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 31/53 (58%), Gaps = 4/53 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE 213
+FN+KD KN +++VL GE+ P L+ PEE+AS E RQ N+ E
Sbjct: 684 LIFNLKDTKNNVLFKRVLKGEISPANLIRMSPEELASKELAAWRQRENRHTIE 736
>gi|327289455|ref|XP_003229440.1| PREDICTED: transcription elongation factor A protein 3-like [Anolis
carolinensis]
Length = 404
Score = 42.0 bits (97), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDPKNP R VL G + + EEMASDE ++ RN +E IR+H +
Sbjct: 242 ISNLKDPKNPGLRRNVLCGAISAGRIAKMTAEEMASDELKELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|114052232|ref|NP_001039825.1| transcription elongation factor A protein 3 [Bos taurus]
gi|122135940|sp|Q2KI09.1|TCEA3_BOVIN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3
gi|86438556|gb|AAI12813.1| Transcription elongation factor A (SII), 3 [Bos taurus]
gi|296490011|tpg|DAA32124.1| TPA: transcription elongation factor A protein 3 [Bos taurus]
Length = 349
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 243 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 298
Query: 225 V 225
Sbjct: 299 A 299
>gi|395739672|ref|XP_003780672.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 1 [Pongo abelii]
Length = 301
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 56/119 (47%), Gaps = 10/119 (8%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 137 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 194
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
+ N+KD KNP+ + VL G + P+ EEM SDE + K + ++A IR+H +
Sbjct: 195 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMPSDELKEMRKNLTKEA---IREHQM 250
>gi|281351551|gb|EFB27135.1| hypothetical protein PANDA_001093 [Ailuropoda melanoleuca]
Length = 332
Score = 42.0 bits (97), Expect = 0.23, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 226 ISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 281
Query: 225 V 225
Sbjct: 282 A 282
>gi|407928325|gb|EKG21184.1| Zinc finger RING-type protein [Macrophomina phaseolina MS6]
Length = 1629
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 30/90 (33%), Positives = 44/90 (48%), Gaps = 4/90 (4%)
Query: 78 QAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEME 137
+ + P K G SQ E+ ++ A+ + +RER+A + SKV GE E+
Sbjct: 489 KTSLPAQSKDYGTSQTQVSEEGQRWAAVASKLLEKGSPQAVRERIASSSSKVLGEAIELL 548
Query: 138 KKEQVRACDPVGVAVSVESVLFKNMCPFLF 167
K R P G A VE++L K+ PFLF
Sbjct: 549 KS---RNGKPYGAAGIVEAML-KSFKPFLF 574
>gi|403287385|ref|XP_003934929.1| PREDICTED: transcription elongation factor A protein 3 [Saimiri
boliviensis boliviensis]
Length = 348
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 242 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|355761436|gb|EHH61803.1| hypothetical protein EGM_19926 [Macaca fascicularis]
Length = 344
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 239 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 294
Query: 225 V 225
Sbjct: 295 A 295
>gi|440897844|gb|ELR49454.1| Transcription elongation factor A protein 3, partial [Bos grunniens
mutus]
Length = 328
Score = 41.6 bits (96), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 222 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 277
Query: 225 V 225
Sbjct: 278 A 278
>gi|41350335|ref|NP_003187.1| transcription elongation factor A protein 3 [Homo sapiens]
gi|397478949|ref|XP_003810796.1| PREDICTED: transcription elongation factor A protein 3 [Pan
paniscus]
gi|28380172|sp|O75764.2|TCEA3_HUMAN RecName: Full=Transcription elongation factor A protein 3; AltName:
Full=Transcription elongation factor S-II protein 3;
AltName: Full=Transcription elongation factor TFIIS.h
gi|27469901|gb|AAH41613.1| Transcription elongation factor A (SII), 3 [Homo sapiens]
gi|158261567|dbj|BAF82961.1| unnamed protein product [Homo sapiens]
gi|167773999|gb|ABZ92434.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|306921457|dbj|BAJ17808.1| transcription elongation factor A (SII), 3 [synthetic construct]
gi|410220416|gb|JAA07427.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410263304|gb|JAA19618.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
gi|410328351|gb|JAA33122.1| transcription elongation factor A (SII), 3 [Pan troglodytes]
Length = 348
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 242 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|355557658|gb|EHH14438.1| hypothetical protein EGK_00364, partial [Macaca mulatta]
Length = 348
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 242 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|410966352|ref|XP_003989697.1| PREDICTED: transcription elongation factor A protein 3 [Felis
catus]
Length = 347
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 241 ISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 296
Query: 225 V 225
Sbjct: 297 A 297
>gi|301754936|ref|XP_002913385.1| PREDICTED: transcription elongation factor A protein 3-like
[Ailuropoda melanoleuca]
Length = 492
Score = 41.6 bits (96), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 386 ISNLKDPRNPSLRRNVLSGTISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 441
Query: 225 V 225
Sbjct: 442 A 442
>gi|198432582|ref|XP_002121512.1| PREDICTED: similar to death inducer-obliterator 1 [Ciona
intestinalis]
Length = 1728
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 156 SVLFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMAS 201
+V +KN +FN+KD +N WRKV++G+V LV E+MAS
Sbjct: 820 NVKYKNRYRSIMFNLKDERNHGLWRKVIIGDVTTSELVQMTAEQMAS 866
>gi|384941052|gb|AFI34131.1| transcription elongation factor A protein 3 [Macaca mulatta]
gi|387540828|gb|AFJ71041.1| transcription elongation factor A protein 3 [Macaca mulatta]
Length = 348
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 242 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|196008337|ref|XP_002114034.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
gi|190583053|gb|EDV23124.1| hypothetical protein TRIADDRAFT_58083 [Trichoplax adhaerens]
Length = 302
Score = 41.6 bits (96), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 5/55 (9%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQ-IREDALA 217
N+KD KNP+ +KVL G + PE + EEMASDE RQ K+ IR+ +A
Sbjct: 186 NLKDSKNPNLCQKVLSGIITPEQIAKMTAEEMASDEMKKLRQGYAKEGIRDAQMA 240
>gi|156541048|ref|XP_001600804.1| PREDICTED: transcription elongation factor S-II-like [Nasonia
vitripennis]
Length = 312
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N++D KNP ++G + P L T EEMASDE + +Q +++A+ + +V G
Sbjct: 208 NLRDSKNPTLRTNFIIGAITPGRLATMTAEEMASDEIKQLREQFKKEAINDAQLATVQGT 267
Query: 228 KE--LEC 232
K L+C
Sbjct: 268 KTDLLKC 274
>gi|296813901|ref|XP_002847288.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
gi|238842544|gb|EEQ32206.1| conserved hypothetical protein [Arthroderma otae CBS 113480]
Length = 867
Score = 41.6 bits (96), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 34/135 (25%), Positives = 61/135 (45%), Gaps = 28/135 (20%)
Query: 117 LIRERLAEAFSKVAGEVEEMEKKEQVRACDPV----GVAVS----VESVLFKNMC----- 163
+ R A A +K+ E+ E P GV S +E+ ++KN+C
Sbjct: 299 VARRSAATALAKLVTEIAASAVAEGTFTIPPGKTKEGVGESLGEDIENCMYKNLCGSSGE 358
Query: 164 ----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRE 213
LFNV+ KNP +L+G P+++ T + MAS E + ++++I+
Sbjct: 359 PNDAYKTQLRTILFNVR--KNPSLRDSLLVGRTTPDSISTMSTQNMASQELREKDEEIKR 416
Query: 214 DALAKIRDHSVVGEK 228
+A R H+++ E+
Sbjct: 417 EAE---RQHTIIQEQ 428
>gi|307180955|gb|EFN68743.1| Transcription elongation factor A protein 1 [Camponotus floridanus]
Length = 311
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 38/69 (55%), Gaps = 2/69 (2%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
+ N++D KNP+ L+G + P L EEMASDE + +Q +++A+ + +V
Sbjct: 205 IANLRDAKNPNLRMNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQ 264
Query: 226 GEKE--LEC 232
G K L+C
Sbjct: 265 GTKTDLLKC 273
>gi|70991879|ref|XP_750788.1| PHD finger domain protein [Aspergillus fumigatus Af293]
gi|66848421|gb|EAL88750.1| PHD finger domain protein, putative [Aspergillus fumigatus Af293]
Length = 884
Score = 41.6 bits (96), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ S+E +++N+C P+ LFNVK KNP ++L+G + P+ L
Sbjct: 326 LGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSKM 383
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E ++ +IR +A R H +V E+
Sbjct: 384 SSQDMASEELLQKDAEIRREAE---RQHIIVEEQ 414
>gi|426328285|ref|XP_004024930.1| PREDICTED: transcription elongation factor A protein 3 [Gorilla
gorilla gorilla]
Length = 327
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 221 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 276
Query: 225 V 225
Sbjct: 277 A 277
>gi|307105461|gb|EFN53710.1| hypothetical protein CHLNCDRAFT_53651 [Chlorella variabilis]
Length = 1283
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 34/113 (30%), Positives = 48/113 (42%), Gaps = 15/113 (13%)
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFK-----------NMC 163
R +R + +A VA E E R +P A +VE+ LFK
Sbjct: 368 RQKVRGGIQQALELVATEA----AGEAGRLPEPAPTAEAVEAALFKLYGGTTKDYKQKFR 423
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
FN+KD NPD VL G++ P+ V E+A+ E + K E+AL
Sbjct: 424 TLQFNLKDAHNPDLRAHVLRGDIAPDAFVRMTATELANKELAAYRKAKEEEAL 476
>gi|159124350|gb|EDP49468.1| PHD finger domain protein, putative [Aspergillus fumigatus A1163]
Length = 885
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 49/94 (52%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC--------PF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ S+E +++N+C P+ LFNVK KNP ++L+G + P+ L
Sbjct: 326 LGFSIEKAMYQNICGGSGEPTEPYKLQLRTILFNVK--KNPSLRDRLLVGSLLPDALSKM 383
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
++MAS+E ++ +IR +A R H +V E+
Sbjct: 384 SSQDMASEELLQKDAEIRREAE---RQHIIVEEQ 414
>gi|119615455|gb|EAW95049.1| transcription elongation factor A (SII), 3, isoform CRA_b [Homo
sapiens]
Length = 396
Score = 41.6 bits (96), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 242 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 297
Query: 225 V 225
Sbjct: 298 A 298
>gi|3288459|emb|CAA11393.1| transcription elongation factor TFIIS.h [Homo sapiens]
Length = 320
Score = 41.6 bits (96), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 214 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 269
Query: 225 V 225
Sbjct: 270 A 270
>gi|302683244|ref|XP_003031303.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
gi|300104995|gb|EFI96400.1| hypothetical protein SCHCODRAFT_56755 [Schizophyllum commune H4-8]
Length = 286
Score = 41.2 bits (95), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 7/69 (10%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVG- 226
N+K NP +VL GE++P L T +MAS+ER++ + +IRE + H +G
Sbjct: 182 NLKAKSNPGLRARVLKGELEPARLATMSVADMASEERKAADSKIREQTI-----HESLGA 236
Query: 227 -EKELECDA 234
E+E E DA
Sbjct: 237 AEQEAETDA 245
>gi|351705981|gb|EHB08900.1| Transcription elongation factor A protein 3 [Heterocephalus glaber]
Length = 543
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSVV 225
N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 326 NLKDPRNPGLRRNVLNGAISAGLIAKMTAEEMASDELRKLRNAMTQE----AIREHQMA 380
>gi|443710452|gb|ELU04705.1| hypothetical protein CAPTEDRAFT_155099 [Capitella teleta]
Length = 309
Score = 41.2 bits (95), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 45/164 (27%), Positives = 71/164 (43%), Gaps = 29/164 (17%)
Query: 87 PLGQSQPPKQEQD-----RKTASAVEIK-CSDATRTLIRERLAEAFSKVAGEVEEMEKKE 140
P S PP D R+ +S+ E+ SD R RE L +A EK+
Sbjct: 116 PAESSTPPDLSSDAAPRLRRMSSSAEVDDTSDPVRIKCRELLTKALQTPP------EKEG 169
Query: 141 QVRACDPVGVAVSVESVL---FKN--------MCPFLFNVKDPKNPDFWRKVLLGEVKPE 189
AC+ +A +E + FKN + + N++D KNP V+ G + PE
Sbjct: 170 CAPACE---LAAGIEQSIYNEFKNTEMKYKTRVRSRVANLRDSKNPKLREGVMYGFIPPE 226
Query: 190 TLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGEKELECD 233
+ + EEMASD+ + ++ ++A I DH + + E D
Sbjct: 227 RMASMTSEEMASDDLKKLREKFTKEA---INDHQMAQQGGTETD 267
>gi|195579326|ref|XP_002079513.1| GD21972 [Drosophila simulans]
gi|194191522|gb|EDX05098.1| GD21972 [Drosophila simulans]
Length = 146
Score = 41.2 bits (95), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 33/61 (54%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V G
Sbjct: 42 NLKDPKNPGLRGNFMCGAVTAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGT 101
Query: 228 K 228
K
Sbjct: 102 K 102
>gi|8050580|gb|AAF71710.1|AF220261_1 transcription elongation factor TFIIS [Drosophila virilis]
Length = 324
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V G
Sbjct: 220 NLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGT 279
Query: 228 KE--LEC 232
K L+C
Sbjct: 280 KTDLLKC 286
>gi|300120236|emb|CBK19790.2| unnamed protein product [Blastocystis hominis]
Length = 285
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+ DPKNPD ++ GE++PE L +EMAS E
Sbjct: 34 ILFNLSDPKNPDLRNRIFSGELEPERLPIMTNDEMASSE 72
>gi|195385615|ref|XP_002051500.1| TfIIS [Drosophila virilis]
gi|194147957|gb|EDW63655.1| TfIIS [Drosophila virilis]
Length = 324
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V G
Sbjct: 220 NLKDPKNPGLRSNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGT 279
Query: 228 KE--LEC 232
K L+C
Sbjct: 280 KTDLLKC 286
>gi|115444961|ref|NP_001046260.1| Os02g0208600 [Oryza sativa Japonica Group]
gi|113535791|dbj|BAF08174.1| Os02g0208600, partial [Oryza sativa Japonica Group]
Length = 913
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 117 LIRERLAEAFSK---VAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---------- 163
++ + L+E+ SK A + E ++K ++ D +AV VE LFK
Sbjct: 313 VVADTLSESESKRMKSANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKG 370
Query: 164 -PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +VL G++ P+ L + EE+AS E
Sbjct: 371 RSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKE 411
>gi|334328236|ref|XP_003341053.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Monodelphis domestica]
Length = 487
Score = 41.2 bits (95), Expect = 0.34, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 5/58 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAK 218
+ N+KDP+NP+ R VL G + + EEMASDE ++ RN + IRE +AK
Sbjct: 247 ISNLKDPRNPNLRRNVLCGAISTSLIARMTAEEMASDELKELRNAMTLEAIREHQMAK 304
>gi|355723564|gb|AES07932.1| transcription elongation factor A , 3 [Mustela putorius furo]
Length = 324
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 219 ISNLKDPRNPSLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 274
Query: 225 V 225
Sbjct: 275 A 275
>gi|50552628|ref|XP_503724.1| YALI0E09196p [Yarrowia lipolytica]
gi|49649593|emb|CAG79314.1| YALI0E09196p [Yarrowia lipolytica CLIB122]
Length = 295
Score = 41.2 bits (95), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 162 MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
M N+KDPKNP V+ G++ E L P+EMASDE
Sbjct: 185 MRSLYINLKDPKNPGLRGNVISGKISAERLCRMSPQEMASDE 226
>gi|335307331|ref|XP_003360800.1| PREDICTED: LOW QUALITY PROTEIN: transcription elongation factor A
protein 3-like [Sus scrofa]
Length = 388
Score = 41.2 bits (95), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 282 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 337
Query: 225 V 225
Sbjct: 338 A 338
>gi|47220832|emb|CAG00039.1| unnamed protein product [Tetraodon nigroviridis]
Length = 424
Score = 41.2 bits (95), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP + VL G + + + EEMASDE +Q RN + IRE +AK
Sbjct: 318 ISNLKDPKNPGLRKNVLAGTIALSRIASMSAEEMASDELKQLRNTLTQEAIREHQMAKT 376
>gi|338721851|ref|XP_001504276.3| PREDICTED: hypothetical protein LOC100071603 [Equus caballus]
Length = 654
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE R+ RN +E IR+H +
Sbjct: 447 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELRELRNAMTQE----AIREHQM 502
Query: 225 V 225
Sbjct: 503 A 503
>gi|301777208|ref|XP_002924013.1| PREDICTED: SPOC domain-containing protein 1-like [Ailuropoda
melanoleuca]
Length = 1182
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 28/83 (33%), Positives = 43/83 (51%), Gaps = 18/83 (21%)
Query: 149 GVAVSVESVLFK----NMCPF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTA--- 194
G+A +E+ LF C + LFN++DP+NPD + KV+ G+V P LV
Sbjct: 592 GIAAGIETALFDLTQATSCRYKTKYRSLLFNLRDPRNPDLFLKVVQGDVTPHDLVRMSTA 651
Query: 195 --LPEEMA--SDERQSRNKQIRE 213
P+E+A D+ + R +I E
Sbjct: 652 QLAPQELARWRDQEEKRGLEIIE 674
>gi|357139063|ref|XP_003571105.1| PREDICTED: uncharacterized protein LOC100836963 [Brachypodium
distachyon]
Length = 1244
Score = 41.2 bits (95), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 7/59 (11%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHS 223
LFN+KD NP+ +VL G++ PE L + EE+AS K++ E LAK +H+
Sbjct: 376 LLFNLKDKSNPELRVRVLSGDIAPERLCSMTAEELAS-------KELSEWRLAKAEEHA 427
>gi|313223|emb|CAA51940.1| transcription elongation factor [Homo sapiens]
Length = 301
Score = 41.2 bits (95), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 18/129 (13%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESV 157
T+ +V++KC RE LA A +A +E E Q+ + + + +
Sbjct: 136 TSDSVQLKC--------REMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDM 185
Query: 158 LFKNMC-PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+KN + N+KD KNP + VL G + P+ EEMASDE + K + ++A
Sbjct: 186 KYKNRVRSRISNLKDAKNPYLRKNVLCGNIPPDLFARMTAEEMASDELKEMWKNLTKEA- 244
Query: 217 AKIRDHSVV 225
IR+H +
Sbjct: 245 --IREHQMA 251
>gi|49387896|dbj|BAD24999.1| PHD finger protein-like [Oryza sativa Japonica Group]
gi|49387908|dbj|BAD25008.1| PHD finger protein-like [Oryza sativa Japonica Group]
Length = 1119
Score = 40.8 bits (94), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 32/101 (31%), Positives = 51/101 (50%), Gaps = 16/101 (15%)
Query: 117 LIRERLAEAFSK---VAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---------- 163
++ + L+E+ SK A + E ++K ++ D +AV VE LFK
Sbjct: 313 VVADTLSESESKRMKSANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKG 370
Query: 164 -PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +VL G++ P+ L + EE+AS E
Sbjct: 371 RSLLFNLKDKSNPELRERVLSGDITPDRLCSMTAEELASKE 411
>gi|303277747|ref|XP_003058167.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460824|gb|EEH58118.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 920
Score = 40.8 bits (94), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 22/58 (37%), Positives = 31/58 (53%), Gaps = 4/58 (6%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIREDALAK 218
+FN+KDP NP +VL GE+ P+ L P E+A + R+ R + EDA K
Sbjct: 202 LIFNLKDPSNPHLRGRVLRGELTPQVLCVLSPTELARKDLQEMRREREALVGEDAFLK 259
>gi|260797171|ref|XP_002593577.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
gi|229278803|gb|EEN49588.1| hypothetical protein BRAFLDRAFT_88149 [Branchiostoma floridae]
Length = 588
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLF 167
K D+ R RE LA A + EM+ K +VR+ +
Sbjct: 108 TKTHDSVREKCREMLANALKTDEFKNTEMKYKTRVRS--------------------RIA 147
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIREDA 215
N+KD KNP KVL G+V E + EEMAS E RQS K+ DA
Sbjct: 148 NLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAIRDA 199
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 47/112 (41%), Gaps = 24/112 (21%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLF 167
K D+ R RE LA A + EM+ K +VR+ +
Sbjct: 357 TKTHDSVREKCREMLANALKTDEFKNTEMKYKTRVRS--------------------RIA 396
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIREDA 215
N+KD KNP KVL G+V E + EEMAS E RQS K+ DA
Sbjct: 397 NLKDAKNPGLREKVLHGDVSAEKMAKMTAEEMASPEMKELRQSLTKEAIRDA 448
>gi|332023706|gb|EGI63930.1| Transcription elongation factor S-II [Acromyrmex echinatior]
Length = 288
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N++D KNP+ L+G + P L EEMASDE + +Q +++A+ + +V G
Sbjct: 184 NLRDVKNPNLRTNFLVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGT 243
Query: 228 KE--LEC 232
K L+C
Sbjct: 244 KTDLLKC 250
>gi|256071836|ref|XP_002572244.1| transcription elongation factor s-II [Schistosoma mansoni]
gi|360043833|emb|CCD81379.1| putative transcription elongation factor s-II [Schistosoma mansoni]
Length = 318
Score = 40.8 bits (94), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 150 VAVSVESV---LFKNMCP--------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
+A+ +ES LF N P + N++D NP+ VL+G V P+ L + EE
Sbjct: 185 LAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEE 244
Query: 199 MASDE-RQSRNKQIREDALAKIRDH--SVVGEKELE 231
MAS E ++ R K +E I DH +V G E +
Sbjct: 245 MASKEMKELREKYTKE----TIEDHQMAVTGGTETD 276
>gi|195437119|ref|XP_002066492.1| GK18066 [Drosophila willistoni]
gi|194162577|gb|EDW77478.1| GK18066 [Drosophila willistoni]
Length = 319
Score = 40.8 bits (94), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KDPKNP + G V + L PEEMASDE + ++ ++A+ + +V G
Sbjct: 215 NLKDPKNPGLRGNFMCGAVSAKQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGT 274
Query: 228 KE--LEC 232
K L+C
Sbjct: 275 KTDLLKC 281
>gi|351709942|gb|EHB12861.1| SPOC domain-containing protein 1 [Heterocephalus glaber]
Length = 1116
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 34/115 (29%), Positives = 54/115 (46%), Gaps = 22/115 (19%)
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFK----NMCPF----- 165
R + L EA E+ ++ E+V G+A +E+ LF C +
Sbjct: 519 RVTVVRALWEALWSRVQELPDLGLSEEVVE----GIAAGIEAALFDLTQGTSCRYKIKYR 574
Query: 166 --LFNVKDPKNPDFWRKVLLGEVKPETLVTA-----LPEEMA--SDERQSRNKQI 211
LFN++DP+NPD + KV+ G+V P LV P+E+A D+ + R +I
Sbjct: 575 SLLFNLRDPRNPDLFLKVVHGDVTPHDLVRMNSVQLAPQELARWRDQEEKRGLEI 629
>gi|302796655|ref|XP_002980089.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
gi|302811590|ref|XP_002987484.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300144890|gb|EFJ11571.1| hypothetical protein SELMODRAFT_9088 [Selaginella moellendorffii]
gi|300152316|gb|EFJ18959.1| hypothetical protein SELMODRAFT_9085 [Selaginella moellendorffii]
Length = 58
Score = 40.8 bits (94), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD NPD +V +GEV PE L + E++AS E
Sbjct: 9 LVFNLKDKNNPDLRARVFVGEVSPEQLCSMTIEQLASKE 47
>gi|170111316|ref|XP_001886862.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164638220|gb|EDR02499.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 294
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 44/91 (48%), Gaps = 11/91 (12%)
Query: 145 CDPVGVAVSVESVLFKNMCPFLF-NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
CD V A +K+ LF N+KD NP ++ GE++ E +EMAS+E
Sbjct: 173 CDGVTAA-------YKSKIRSLFVNLKDKSNPSLRESIVSGELQAEKFTKMTSQEMASEE 225
Query: 204 RQSRNKQIREDALAKIRDHSVVGEKELECDA 234
R++ + +IR + + E++ E DA
Sbjct: 226 RKAADNKIRAE---NFHNSLAAAEQQAETDA 253
>gi|115400495|ref|XP_001215836.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114191502|gb|EAU33202.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 885
Score = 40.8 bits (94), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 33/132 (25%), Positives = 65/132 (49%), Gaps = 24/132 (18%)
Query: 109 KCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC----- 163
+ + A L E++ EA + + + + KE+V +A+++E +++N+C
Sbjct: 301 RAATALSRLFVEQITEAQKRGPFNLPDGKTKEEVGQ----QIALAIEYAMYQNICGGAGE 356
Query: 164 ----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRE 213
LFNVK KN ++L+G + P++L ++MAS+E Q ++ +I+
Sbjct: 357 PTEAYKLQLRTILFNVK--KNTSLRDRLLVGSLSPDSLSKMSSQDMASEELQQKDAEIKR 414
Query: 214 DALAKIRDHSVV 225
+A R H +V
Sbjct: 415 EAE---RQHIIV 423
>gi|289742185|gb|ADD19840.1| transcription elongation factor tFIIS [Glossina morsitans
morsitans]
Length = 326
Score = 40.4 bits (93), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KDPKNP + G + + L PEEMASDE + ++ ++A+ + +V G
Sbjct: 222 NLKDPKNPTLRGNFMCGAITAQQLAKMTPEEMASDEMKKLREKFVKEAINDAQLATVQGT 281
Query: 228 KE--LEC 232
K L+C
Sbjct: 282 KTDLLKC 288
>gi|350585852|ref|XP_003482063.1| PREDICTED: SPOC domain-containing protein 1-like [Sus scrofa]
Length = 1288
Score = 40.4 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 27/83 (32%), Positives = 42/83 (50%), Gaps = 18/83 (21%)
Query: 149 GVAVSVESVLF-----------KNMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTA--- 194
G+A +E+ LF LFN++DP+NPD + KV+ G+V P+ LV
Sbjct: 624 GLAAGIEAALFDLTHATNGHYRTKYRSLLFNLRDPRNPDLFLKVIHGDVTPQGLVRMNSV 683
Query: 195 --LPEEMA--SDERQSRNKQIRE 213
P+E+A D+ + R +I E
Sbjct: 684 QLAPQELARWRDQEEKRGLEIIE 706
>gi|226478976|emb|CAX72983.1| RNA polymerase II elongation factor [Schistosoma japonicum]
Length = 317
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 47/96 (48%), Gaps = 18/96 (18%)
Query: 150 VAVSVESV---LFKNMCP--------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
+A+ +ES LF N P + N++D NP+ VL+G V P+ L + EE
Sbjct: 184 LAIRIESSIYDLFNNTDPKYKQRVRTRVMNLRDSNNPNLRLNVLMGHVSPDKLASMTSEE 243
Query: 199 MASDE-RQSRNKQIREDALAKIRDH--SVVGEKELE 231
MAS E ++ R K +E I DH +V G E +
Sbjct: 244 MASKEMKELREKYTKE----TIEDHQMAVTGGTETD 275
>gi|358254214|dbj|GAA54231.1| transcription elongation factor S-II, partial [Clonorchis sinensis]
Length = 143
Score = 40.4 bits (93), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 37/69 (53%), Gaps = 7/69 (10%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDH-- 222
+ N++D NP+ VL+G V P+ L + EEMAS E ++ R K +E I DH
Sbjct: 38 VMNLRDSNNPNLRLNVLMGHVNPDKLASMTSEEMASKEMKELREKYTKE----TIEDHQM 93
Query: 223 SVVGEKELE 231
+V G E +
Sbjct: 94 AVTGGTETD 102
>gi|348507274|ref|XP_003441181.1| PREDICTED: hypothetical protein LOC100699272 [Oreochromis
niloticus]
Length = 1691
Score = 40.4 bits (93), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 30/53 (56%), Gaps = 4/53 (7%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIRE 213
+FN+KD KN ++VL GE+ P L+ PEE+AS E RQ N+ E
Sbjct: 749 LMFNLKDTKNNILCKRVLKGEISPANLIRMSPEELASKELAAWRQRENRHTIE 801
>gi|344253671|gb|EGW09775.1| Transcription elongation factor A protein 1 [Cricetulus griseus]
Length = 278
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 31/55 (56%), Gaps = 3/55 (5%)
Query: 170 KDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
KD KNP+ + VL G + P+ EEMASDE + K + ++A IR+H +
Sbjct: 176 KDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDELKEMRKNLTKEA---IREHQM 227
>gi|212536338|ref|XP_002148325.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
gi|210070724|gb|EEA24814.1| transcription elongation factor S-II [Talaromyces marneffei ATCC
18224]
Length = 296
Score = 40.4 bits (93), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 50/91 (54%), Gaps = 16/91 (17%)
Query: 151 AVSVESVLFKNMCP-----------FLF-NVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
A++VE+ F + P LF N+K+ NP ++VL G+V P+ V +E
Sbjct: 164 AIAVEAAAFTSFGPETKEQYKTKIRSLFQNLKNKSNPQLRQRVLSGDVTPDKFVNMTHDE 223
Query: 199 MASDERQSRNKQIREDALAKIRDHSVVGEKE 229
+ SDER++ +++I+++ + D ++V + E
Sbjct: 224 LKSDERRALDQKIQKENM----DKAMVAQAE 250
>gi|71023611|ref|XP_762035.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
gi|46101600|gb|EAK86833.1| hypothetical protein UM05888.1 [Ustilago maydis 521]
Length = 315
Score = 40.4 bits (93), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 150 VAVSVESVLFKNMC-------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALP 196
AV+VE+ + N N+KD NPD +V+ G++ + LVT
Sbjct: 180 AAVAVEAAILSNQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVVEGDIAADKLVTMTN 239
Query: 197 EEMASDERQSRNKQIREDALAKIRDHSVVGEKELECDA 234
EE+ASD+R+ ++I E + + +E E DA
Sbjct: 240 EELASDKRK---REIEELQMQNLFKAKGAAAQEAETDA 274
>gi|242764560|ref|XP_002340799.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
gi|218723995|gb|EED23412.1| PHD finger domain protein, putative [Talaromyces stipitatus ATCC
10500]
Length = 875
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 55/114 (48%), Gaps = 21/114 (18%)
Query: 117 LIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC------------- 163
+ +E++ A + A V + +E V P+G+ SVE ++ N+C
Sbjct: 289 IFKEQVTSAQKQAAYSVPPEKTEEDV--ARPLGL--SVEHAMYVNLCGGSGEPNDAYKNQ 344
Query: 164 --PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
+FNVK N ++L G + P TL T ++MAS+E+Q ++ +I+ A
Sbjct: 345 LRSIMFNVK--ANSSLRDRLLSGSLAPSTLATMSSQDMASEEQQQKDAEIKRAA 396
>gi|82915268|ref|XP_729034.1| transcription elongation factor TFIIS.h [Plasmodium yoelii yoelii
17XNL]
gi|23485845|gb|EAA20599.1| transcription elongation factor TFIIS.h, putative [Plasmodium
yoelii yoelii]
Length = 366
Score = 40.0 bits (92), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIREDALAKIRDHSV 224
FN+ D KNP+F K+ + TL T ++MASDE+++ R K ++E LA D V
Sbjct: 256 FNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKKNERQKCLQESLLACQSDWDV 314
>gi|358369364|dbj|GAA85979.1| PHD finger domain protein [Aspergillus kawachii IFO 4308]
Length = 927
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 47/79 (59%), Gaps = 6/79 (7%)
Query: 150 VAVSVESVLFKNMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNK 209
+++S+ES + + +FNVK KNP ++L+G + P+ L ++MAS+E Q ++
Sbjct: 385 LSLSLESAM-SQLRTIMFNVK--KNPSLRDRLLVGSLSPDALSKMSTQDMASEELQQKDA 441
Query: 210 QIREDALAKIRDHSVVGEK 228
+I+ +A R H +V E+
Sbjct: 442 EIKREAE---RQHIIVQEQ 457
>gi|222622404|gb|EEE56536.1| hypothetical protein OsJ_05842 [Oryza sativa Japonica Group]
Length = 614
Score = 40.0 bits (92), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 128 KVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPD 176
K A + E ++K ++ D +AV VE LFK LFN+KD NP+
Sbjct: 2 KSANDEEAIDKDSIIQKAD--DLAVRVEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE 59
Query: 177 FWRKVLLGEVKPETLVTALPEEMASDE 203
+VL G++ P+ L + EE+AS E
Sbjct: 60 LRERVLSGDITPDRLCSMTAEELASKE 86
>gi|343427400|emb|CBQ70927.1| related to transcription elongation factor TFIIS [Sporisorium
reilianum SRZ2]
Length = 319
Score = 40.0 bits (92), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 29/98 (29%), Positives = 47/98 (47%), Gaps = 16/98 (16%)
Query: 150 VAVSVESVLFKNMC-------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALP 196
AV+VE+ + N N+KD NPD +V+ ++ +TLVT
Sbjct: 184 AAVAVEAAILANQGKGAVTTEYRNKVRSLSLNIKDKNNPDLRARVVERDIPADTLVTMSN 243
Query: 197 EEMASDERQSRNKQIREDALAKIRDHSVVGEKELECDA 234
EE+ASD+R+ +Q++ L K + + +E E DA
Sbjct: 244 EELASDKRKREIEQLQMQNLFKAKGAAA---QEAETDA 278
>gi|68072123|ref|XP_677975.1| transcription elongation factor [Plasmodium berghei strain ANKA]
gi|56498287|emb|CAH96309.1| transcription elongation factor s-ii, putative [Plasmodium berghei]
Length = 365
Score = 40.0 bits (92), Expect = 0.76, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIREDALAKIRDHSV 224
FN+ D KNP+F K+ + TL T ++MASDE+++ R K ++E LA D V
Sbjct: 255 FNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKKNERQKCLQESLLACQSDWDV 313
>gi|345324936|ref|XP_003430868.1| PREDICTED: transcription elongation factor A protein 3-like
[Ornithorhynchus anatinus]
Length = 281
Score = 40.0 bits (92), Expect = 0.80, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 32/56 (57%), Gaps = 5/56 (8%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAK 218
N++DP+NP R VL G + + EEMASDE ++ RN + IRE +AK
Sbjct: 177 NLRDPRNPALRRSVLCGGIAASRIARMTAEEMASDELKELRNAMTLEAIREHQMAK 232
>gi|194664368|ref|XP_588581.4| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|297472143|ref|XP_002685704.1| PREDICTED: SPOC domain-containing protein 1 [Bos taurus]
gi|296490254|tpg|DAA32367.1| TPA: SPOC domain containing 1-like [Bos taurus]
Length = 1249
Score = 40.0 bits (92), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 43/84 (51%), Gaps = 20/84 (23%)
Query: 149 GVAVSVESVLFKNMC------------PFLFNVKDPKNPDFWRKVLLGEVKPETL----- 191
G+A +E+ LF N+ LFN++DP+NP+ + KV+ G++ P L
Sbjct: 658 GIAAGIEAALF-NLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSS 716
Query: 192 VTALPEEMA--SDERQSRNKQIRE 213
V P+E+A D+ + R +I E
Sbjct: 717 VQLAPQELARWRDQEEKRGLEIIE 740
>gi|392584823|gb|EIW74165.1| transcription elongation factor [Coniophora puteana RWD-64-598 SS2]
Length = 294
Score = 40.0 bits (92), Expect = 0.85, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 41/80 (51%), Gaps = 4/80 (5%)
Query: 156 SVLFKNMCPFLF-NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
S +K+ LF N+KD NP ++ G++ P T EMAS+ER++ +K+++E+
Sbjct: 177 SAEYKSKIRSLFVNLKDKNNPSLRETIVSGDLSPSKFATMSSSEMASEERRAADKRLQEE 236
Query: 215 ALAKIRDHSVVGEKELECDA 234
K E+E E D
Sbjct: 237 NFFK---SLAAAEQEAETDG 253
>gi|410905253|ref|XP_003966106.1| PREDICTED: transcription elongation factor A protein 3-like
[Takifugu rubripes]
Length = 502
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 34/59 (57%), Gaps = 5/59 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRN----KQIREDALAKI 219
+ N+KDPKNP + VL G + + + EEMASDE +Q RN + IRE +AK
Sbjct: 380 ISNLKDPKNPGLRKNVLAGTLALSRIASMSAEEMASDELKQLRNTLTQEAIREHQMAKT 438
>gi|224092388|ref|XP_002309587.1| predicted protein [Populus trichocarpa]
gi|222855563|gb|EEE93110.1| predicted protein [Populus trichocarpa]
Length = 743
Score = 40.0 bits (92), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 34/69 (49%), Gaps = 11/69 (15%)
Query: 146 DPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
DP +A +E+ LFK LFN+KD NP+ KV+ GE+ P L +
Sbjct: 390 DPQFLASEIEAELFKLFGGVNKKYKEKGRSLLFNLKDRSNPELREKVMSGEITPGRLCSM 449
Query: 195 LPEEMASDE 203
EE+AS E
Sbjct: 450 TAEELASKE 458
>gi|344287082|ref|XP_003415284.1| PREDICTED: transcription elongation factor A protein 3-like
[Loxodonta africana]
Length = 500
Score = 39.7 bits (91), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE ++ RN +E IR+H +
Sbjct: 243 ISNLKDPRNPGLRRNVLSGAISAGLIAKMTAEEMASDELKELRNAMTQE----AIREHQM 298
Query: 225 V 225
Sbjct: 299 A 299
>gi|242017625|ref|XP_002429288.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
gi|212514184|gb|EEB16550.1| transcription elongation factor S-II, putative [Pediculus humanus
corporis]
Length = 289
Score = 39.7 bits (91), Expect = 0.91, Method: Compositional matrix adjust.
Identities = 62/225 (27%), Positives = 95/225 (42%), Gaps = 53/225 (23%)
Query: 41 IMGLSTNQMKNRVSVESKKFKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQP------- 93
++ LS +KN KKF + SS T+ + + A L +S+P
Sbjct: 47 VISLSKTLIKNW-----KKFLSNSSATSNNKDNNTNNTTATAANTPKLEKSKPVEDKSEE 101
Query: 94 --PKQEQDRK----------TASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQ 141
P ++ DRK TA +V IKC RE LA A + G E +Q
Sbjct: 102 PKPTKKDDRKRHQTSFPPSNTADSVRIKC--------RELLAAA---IKGNTES----DQ 146
Query: 142 VRAC-DPVGVAVSVESVLF----------KN-MCPFLFNVKDPKNPDFWRKVLLGEVKPE 189
V C P +A +E +F KN + + N+KDPKNP+ L+G +
Sbjct: 147 VDGCGSPEDLAEELEEAIFNEFRNTDIKYKNRIRSRVANLKDPKNPNLRMNYLIGALPAS 206
Query: 190 TLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGEKE--LEC 232
L EE+ASDE + + +++A+ + +V G K L+C
Sbjct: 207 RLAVMTAEELASDEMKQIRDKFKKEAINDAQLATVQGTKTDLLKC 251
>gi|383847733|ref|XP_003699507.1| PREDICTED: transcription elongation factor S-II-like isoform 2
[Megachile rotundata]
Length = 311
Score = 39.7 bits (91), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N++D KNP+ + G + P L EEMASDE + +Q +++A+ + +V G
Sbjct: 207 NLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGT 266
Query: 228 KE--LEC 232
K L+C
Sbjct: 267 KTDLLKC 273
>gi|242096284|ref|XP_002438632.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
gi|241916855|gb|EER89999.1| hypothetical protein SORBIDRAFT_10g023180 [Sorghum bicolor]
Length = 732
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 19/43 (44%), Positives = 26/43 (60%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSR 207
LFN+KD NP +VL GE+ P+ L + EE+AS E +R
Sbjct: 364 LLFNLKDKSNPVLRGQVLSGEITPKCLCSMTTEELASKELSAR 406
>gi|218190291|gb|EEC72718.1| hypothetical protein OsI_06323 [Oryza sativa Indica Group]
Length = 907
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 13/87 (14%)
Query: 128 KVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPD 176
K A + E ++K ++ D +AV +E LFK LFN+KD NP+
Sbjct: 2 KSANDEEAIDKDSIIQKAD--DLAVRIEEELFKLFGGVNKKYKEKGRSLLFNLKDKSNPE 59
Query: 177 FWRKVLLGEVKPETLVTALPEEMASDE 203
+VL G++ P+ L + EE+AS E
Sbjct: 60 LRERVLSGDITPDRLCSMTAEELASKE 86
>gi|70953587|ref|XP_745885.1| transcription elongation factor s-ii [Plasmodium chabaudi chabaudi]
gi|56526345|emb|CAH78009.1| transcription elongation factor s-ii, putative [Plasmodium chabaudi
chabaudi]
Length = 364
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%), Gaps = 1/52 (1%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIREDALA 217
FN+ D KNP+F K+ + TL T ++MASDE+++ R K ++E LA
Sbjct: 254 FNLSDKKNPNFNEKIYAEYISARTLATMNSQDMASDEKKNERQKCLQESLLA 305
>gi|302510146|ref|XP_003017033.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
gi|291180603|gb|EFE36388.1| PHD finger domain protein, putative [Arthroderma benhamiae CBS
112371]
Length = 833
Score = 39.7 bits (91), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ +E +++N+C LFNV+ KNP +L+G P+ + T
Sbjct: 310 LGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTM 367
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
+ MAS E + ++++I+ +A R H+++ E+
Sbjct: 368 STQNMASQELREKDEEIKREAE---RQHTIIQEQ 398
>gi|327305353|ref|XP_003237368.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
gi|326460366|gb|EGD85819.1| transcription elongation factor S-II [Trichophyton rubrum CBS
118892]
Length = 297
Score = 39.7 bits (91), Expect = 0.95, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 15/184 (8%)
Query: 58 KKFKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQ---EQDRKTASAVEIKCSDAT 114
KK +P S + K G A K + PP + + D+ + S +K D+
Sbjct: 83 KKTASPGSSDSPKPTPNGTGTPASATNDKAQSSNVPPDKRSWKADQVSTSVTGVKARDSC 142
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFNVKDPKN 174
L+ + L ++ V + K +V A + V M N+K+ N
Sbjct: 143 LGLMYDGLCLGSTESPQAV--LRKATEVEAAAFKAFGPETKEVYRSKMRSLYQNLKNKSN 200
Query: 175 PDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE------K 228
+VL EV PE V EE+ SDER+ +++I+++ + D ++VG+ K
Sbjct: 201 LSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENM----DKAMVGQPERSISK 256
Query: 229 ELEC 232
L+C
Sbjct: 257 SLQC 260
>gi|383847731|ref|XP_003699506.1| PREDICTED: transcription elongation factor S-II-like isoform 1
[Megachile rotundata]
Length = 312
Score = 39.7 bits (91), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N++D KNP+ + G + P L EEMASDE + +Q +++A+ + +V G
Sbjct: 208 NLRDAKNPNLRTNFIAGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGT 267
Query: 228 KE--LEC 232
K L+C
Sbjct: 268 KTDLLKC 274
>gi|302654552|ref|XP_003019080.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
gi|291182777|gb|EFE38435.1| PHD finger domain protein, putative [Trichophyton verrucosum HKI
0517]
Length = 833
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ +E +++N+C LFNV+ KNP +L+G P+ + T
Sbjct: 310 LGTEIEDCMYRNLCGSAGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTM 367
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
+ MAS E + ++++I+ +A R H+++ E+
Sbjct: 368 STQNMASQELREKDEEIKREAE---RQHTIIQEQ 398
>gi|156102921|ref|XP_001617153.1| transcription elongation factor [Plasmodium vivax Sal-1]
gi|148806027|gb|EDL47426.1| transcription elongation factor, putative [Plasmodium vivax]
Length = 435
Score = 39.7 bits (91), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%), Gaps = 1/59 (1%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIREDALAKIRDHSV 224
FN+ D KNP F K+ + P T+ T +EMASDE++ RNK ++E A D V
Sbjct: 325 FNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQESLQACQSDWDV 383
>gi|307192626|gb|EFN75800.1| Transcription elongation factor S-II [Harpegnathos saltator]
Length = 278
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N++D KNP+ ++G + P L EEMASDE + +Q +++A+ + +V G
Sbjct: 174 NLRDVKNPNLRTNFIVGAITPARLAVMTAEEMASDEIKQLREQFKKEAINDAQLATVQGT 233
Query: 228 KE--LEC 232
K L+C
Sbjct: 234 KTDLLKC 240
>gi|302658771|ref|XP_003021085.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
gi|291184964|gb|EFE40467.1| hypothetical protein TRV_04798 [Trichophyton verrucosum HKI 0517]
Length = 297
Score = 39.7 bits (91), Expect = 0.98, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 77/184 (41%), Gaps = 15/184 (8%)
Query: 58 KKFKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQ---EQDRKTASAVEIKCSDAT 114
KK +P S + K G A K + PP + + D+ S +K D+
Sbjct: 83 KKTASPGSSDSPKPTPNGTGTPASATNDKAQSSNVPPDKRNWKADQVNTSVTGVKARDSC 142
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFNVKDPKN 174
L+ + L ++ + V + K +V A + V M N+K+ N
Sbjct: 143 IGLMYDGLCLGSTESSQAV--LRKAAEVEAAAFKAFGPESKEVYRTKMRSLFQNLKNTSN 200
Query: 175 PDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE------K 228
+VL EV PE V EE+ SDER+ +++I+++ + D ++VG+ K
Sbjct: 201 LSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENM----DKAMVGQPERSISK 256
Query: 229 ELEC 232
L+C
Sbjct: 257 SLQC 260
>gi|327302438|ref|XP_003235911.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
gi|326461253|gb|EGD86706.1| hypothetical protein TERG_02966 [Trichophyton rubrum CBS 118892]
Length = 832
Score = 39.7 bits (91), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ +E +++N+C LFNV+ KNP +L+G P+ + T
Sbjct: 311 LGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTM 368
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
+ MAS E + ++++I+ +A R H+++ E+
Sbjct: 369 STQNMASQELREKDEEIKREAE---RQHTIIQEQ 399
>gi|401395411|ref|XP_003879596.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
gi|325114003|emb|CBZ49561.1| putative transcription elongation factor TFIIS [Neospora caninum
Liverpool]
Length = 418
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 18/78 (23%)
Query: 150 VAVSVESVLFKNMC--------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTAL 195
VA +E L++ C +N D KNPD KVL G PE L T
Sbjct: 277 VAAEIEKALWQEYCVKRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLATMN 336
Query: 196 PEEMASDERQSRNKQIRE 213
++ASDE+ K++RE
Sbjct: 337 SADLASDEK----KRMRE 350
>gi|333361278|pdb|3NDQ|A Chain A, Structure Of Human Tfiis Domain Ii
Length = 108
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 46/98 (46%), Gaps = 7/98 (7%)
Query: 111 SDATRTLIRERLAEAF----SKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC-PF 165
SD+ R RE LA A +A +E E Q+ + + + + +KN
Sbjct: 13 SDSVRLKCREMLAAALRTGDDYIAIGADEEELGSQIE--EAIYQEIRNTDMKYKNRVRSR 70
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+ N+KD KNP+ + VL G + P+ EEMASDE
Sbjct: 71 ISNLKDAKNPNLRKNVLCGNIPPDLFARMTAEEMASDE 108
>gi|405958419|gb|EKC24549.1| Transcription elongation factor A protein 1 [Crassostrea gigas]
Length = 369
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 32/58 (55%), Gaps = 5/58 (8%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSV 224
N+KD KNP V++G + PE + EEMASDE RQ R K +E I DH +
Sbjct: 193 NLKDKKNPKLKEGVIMGLIPPERIANMSAEEMASDEMRQLRAKFTKE----SIDDHQM 246
>gi|326475222|gb|EGD99231.1| PHD finger domain-containing protein [Trichophyton tonsurans CBS
112818]
Length = 833
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ +E +++N+C LFNV+ KNP +L+G P+ + T
Sbjct: 310 LGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTM 367
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
+ MAS E + ++++I+ +A R H+++ E+
Sbjct: 368 STQNMASQELREKDEEIKREAE---RQHTIIQEQ 398
>gi|255932231|ref|XP_002557672.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211582291|emb|CAP80469.1| Pc12g08420 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 877
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/94 (27%), Positives = 48/94 (51%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+A+S+E +++++C +FNVK KN ++L+G + P+ L
Sbjct: 373 LALSIEDAMYESICGRTGEPNEAYKAQLRSIMFNVK--KNASLRDRLLIGSLSPKLLSQM 430
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
EMAS E Q ++ +I+ +A R H++V E+
Sbjct: 431 TTAEMASKELQQKDAEIKREA---DRHHTIVQEQ 461
>gi|426222699|ref|XP_004005523.1| PREDICTED: SPOC domain-containing protein 1 [Ovis aries]
Length = 1255
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 31/56 (55%), Gaps = 13/56 (23%)
Query: 149 GVAVSVESVLFKNMC------------PFLFNVKDPKNPDFWRKVLLGEVKPETLV 192
G+A +E+ LF N+ LFN++DP+NP+ + KV+ G++ P LV
Sbjct: 695 GIAAGIEAALF-NLTQATNSRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLV 749
>gi|397624121|gb|EJK67280.1| hypothetical protein THAOC_11713 [Thalassiosira oceanica]
Length = 2246
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%), Gaps = 3/61 (4%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVG 226
FN++DPKNP +V++G++ + L+ A E++AS + + + + + A I++ +VG
Sbjct: 2009 FNLQDPKNPSLCARVIVGDMSIDELIDASAEDLASSALKEKRQAVHQKA---IKNVVLVG 2065
Query: 227 E 227
E
Sbjct: 2066 E 2066
>gi|389586162|dbj|GAB68891.1| transcription elongation factor [Plasmodium cynomolgi strain B]
Length = 405
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIREDALA 217
FN+ D KNP F K+ + P T+ T +EMASDE++ RNK ++E A
Sbjct: 292 FNLCDKKNPSFNEKIYAEYIPPRTIATMNSQEMASDEKKKERNKCLQESLQA 343
>gi|326479708|gb|EGE03718.1| PHD finger domain-containing protein [Trichophyton equinum CBS
127.97]
Length = 833
Score = 39.7 bits (91), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ +E +++N+C LFNV+ KNP +L+G P+ + T
Sbjct: 310 LGTEIEDCMYRNLCGSTGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTM 367
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
+ MAS E + ++++I+ +A R H+++ E+
Sbjct: 368 STQNMASQELREKDEEIKREAE---RQHTIIQEQ 398
>gi|291233503|ref|XP_002736692.1| PREDICTED: transcription elongation factor A 1-like [Saccoglossus
kowalevskii]
Length = 138
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 35/61 (57%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KD +NP ++VL G + PE + EEMASD + +++ ++A+ + + + G
Sbjct: 34 NLKDVRNPILRQQVLCGSIPPEKIANMTAEEMASDRLKELRRELTKEAIREAQMSTTGGT 93
Query: 228 K 228
K
Sbjct: 94 K 94
>gi|237841743|ref|XP_002370169.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|95007190|emb|CAJ20411.1| transcription elongation factor s-II, putative [Toxoplasma gondii
RH]
gi|211967833|gb|EEB03029.1| transcription elongation factor TFIIS, putative [Toxoplasma gondii
ME49]
gi|221482635|gb|EEE20973.1| transcription elongation factor, putative [Toxoplasma gondii GT1]
gi|221503171|gb|EEE28877.1| transcription elongation factor, putative [Toxoplasma gondii VEG]
Length = 418
Score = 39.7 bits (91), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 23/130 (17%)
Query: 101 KTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQV---RACDPVGVAVSVESV 157
K ++AVE A+ +R+R A F A V+ M+ + + R+ + VA +E
Sbjct: 227 KASTAVEDYPGPASGDAVRDR-ARGFLWRA-LVDGMQSRRDLGADRSGETARVAAEIEKA 284
Query: 158 LFKNMC--------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
L++ C +N D KNPD KVL G PE L ++ASDE
Sbjct: 285 LWQEYCVRRKSTKEYNMQLKTLKWNFADQKNPDLNLKVLCGVYTPEQLAIMSSADLASDE 344
Query: 204 RQSRNKQIRE 213
+ K++RE
Sbjct: 345 K----KRMRE 350
>gi|449437376|ref|XP_004136468.1| PREDICTED: uncharacterized protein LOC101216628 [Cucumis sativus]
gi|449503562|ref|XP_004162064.1| PREDICTED: uncharacterized protein LOC101228635 [Cucumis sativus]
Length = 1124
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 34/68 (50%), Gaps = 11/68 (16%)
Query: 147 PVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTAL 195
P +A+ +E LFK LFN+KD NP+ +V+ GE+ PE L +
Sbjct: 369 PESLALKIEEELFKLFSGVNKKYKEKGRSLLFNLKDRNNPELRERVMSGEITPERLCSMT 428
Query: 196 PEEMASDE 203
EE+AS E
Sbjct: 429 AEELASKE 436
>gi|395521671|ref|XP_003764939.1| PREDICTED: transcription elongation factor A protein 3 [Sarcophilus
harrisii]
Length = 479
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%), Gaps = 5/61 (8%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED-ALAKIRDHSV 224
+ N+KDP+NP R VL G + + EEMASDE K++R L IR+H +
Sbjct: 256 ISNLKDPRNPSLRRNVLCGAISTSLIARMTAEEMASDEL----KELRSAMTLEAIREHQM 311
Query: 225 V 225
Sbjct: 312 A 312
>gi|315040700|ref|XP_003169727.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
gi|311345689|gb|EFR04892.1| hypothetical protein MGYG_07894 [Arthroderma gypseum CBS 118893]
Length = 849
Score = 39.3 bits (90), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 23/94 (24%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+ +E +++N+C LFNV+ KNP +L+G P+ + T
Sbjct: 326 LGAEIEDCMYRNLCGSSGEPNDAYKNQLRTILFNVR--KNPSLRDSLLVGRTTPDAISTM 383
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
+ MAS E + ++++I+ +A R H+++ E+
Sbjct: 384 STQNMASQELREKDEEIKREAE---RQHTIIQEQ 414
>gi|384246623|gb|EIE20112.1| hypothetical protein COCSUDRAFT_67485 [Coccomyxa subellipsoidea
C-169]
Length = 1199
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/64 (35%), Positives = 34/64 (53%), Gaps = 11/64 (17%)
Query: 150 VAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
VA +E+ +FK+ FN+ D NPDF KVL G+++P L+T +E
Sbjct: 371 VAQRIEATMFKHFGGVNKEYGARNRSIQFNLADKSNPDFRAKVLRGDLEPAKLMTMHTQE 430
Query: 199 MASD 202
MAS+
Sbjct: 431 MASE 434
>gi|356509950|ref|XP_003523705.1| PREDICTED: uncharacterized protein LOC100791982 [Glycine max]
Length = 1090
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +V+ G++ PE L + EE+AS E
Sbjct: 392 LLFNLKDHNNPELRERVMFGKIPPEQLCSMTAEELASKE 430
>gi|156082914|ref|XP_001608941.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia bovis
T2Bo]
gi|154796191|gb|EDO05373.1| transcription factor S-II (TFIIS)and transcription factor S-II
(TFIIS) central domain containing protein [Babesia
bovis]
Length = 302
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 31/50 (62%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
FN+KDPKN F K+ G+++P ++ EMAS+E++ I +++L
Sbjct: 190 FNLKDPKNSTFSDKIYNGDIEPRSVAIMEAAEMASEEKKMERINILQESL 239
>gi|170036779|ref|XP_001846239.1| transcription elongation factor S-II [Culex quinquefasciatus]
gi|167879682|gb|EDS43065.1| transcription elongation factor S-II [Culex quinquefasciatus]
Length = 292
Score = 39.3 bits (90), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/36 (50%), Positives = 21/36 (58%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
N+KDPKNP + G + E L PEEMASDE
Sbjct: 188 NLKDPKNPSLRANFVSGAITAERLAKMTPEEMASDE 223
>gi|429329053|gb|AFZ80812.1| transcription elongation factor S-II, putative [Babesia equi]
Length = 294
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
FN+KDP N F ++ GE+ LVT +MASDE++ + I +++L
Sbjct: 184 FNLKDPNNKSFNDRIYKGEINSLDLVTMKSIDMASDEKKLQRNNILQESL 233
>gi|50556790|ref|XP_505803.1| YALI0F23815p [Yarrowia lipolytica]
gi|74632309|sp|Q6C0K9.1|BYE1_YARLI RecName: Full=Transcription factor BYE1
gi|49651673|emb|CAG78614.1| YALI0F23815p [Yarrowia lipolytica CLIB122]
Length = 822
Score = 39.3 bits (90), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%), Gaps = 3/59 (5%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVV 225
FN++D KN +V+ G+V P+TLV EEM + E Q +++R +A IRD +V
Sbjct: 269 FNLRDSKNETLRIRVMTGQVTPQTLVAMSSEEMMNPELQKLAEEVRAEA---IRDTVLV 324
>gi|407929237|gb|EKG22072.1| Zinc finger TFIIS-type protein [Macrophomina phaseolina MS6]
Length = 302
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 38/64 (59%), Gaps = 1/64 (1%)
Query: 156 SVLFKNMCPFLF-NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIRED 214
S +K LF N+K+ NP ++VL GE++PE VT EE+ S ER++ +++ ++
Sbjct: 185 SAPYKERMRSLFQNLKNKSNPGLRKRVLAGEIRPEKFVTMSSEELMSAERRAEAERLEKE 244
Query: 215 ALAK 218
+ K
Sbjct: 245 NMNK 248
>gi|427797651|gb|JAA64277.1| Putative transcription elongation factor a sii 1, partial
[Rhipicephalus pulchellus]
Length = 292
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 59/135 (43%), Gaps = 32/135 (23%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
T +AV +KC RE L+ A + E+M + C+ +A +E ++
Sbjct: 129 TTNAVRLKC--------RELLSSAL-----KCEDMPE-----GCNTDSLAAKIEESIYNE 170
Query: 162 MCPF-----------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ N+KD KNP VL G ++PE + EEMASD+ + ++
Sbjct: 171 FGDTNNKYKNRVRSRVSNLKDSKNPALRINVLHGAIEPERIARMTAEEMASDDMKQLRQR 230
Query: 211 IREDALAKIRDHSVV 225
+ ++A I DH +
Sbjct: 231 LTKEA---INDHQMA 242
>gi|390597425|gb|EIN06825.1| transcription elongation factor [Punctularia strigosozonata
HHB-11173 SS5]
Length = 320
Score = 39.3 bits (90), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
F N+KD NP V+ GE+ E +MAS+ER++++++IRE+ L
Sbjct: 213 FFVNLKDKNNPGLRAAVVSGELPVEKFAKMTSADMASEERRAQDQKIREENL 264
>gi|340375596|ref|XP_003386320.1| PREDICTED: PHD finger protein 3-like [Amphimedon queenslandica]
Length = 738
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIRED 214
LFN+KD KN ++K+L GE+ + LV PE++AS E + R K I+++
Sbjct: 458 LLFNLKDTKNEGLFKKILCGELSTKQLVRMSPEQLASRELAEWREKTIKKE 508
>gi|119193931|ref|XP_001247569.1| hypothetical protein CIMG_01340 [Coccidioides immitis RS]
gi|392863190|gb|EAS36089.2| PHD finger domain-containing protein [Coccidioides immitis RS]
Length = 849
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 34/132 (25%), Positives = 63/132 (47%), Gaps = 24/132 (18%)
Query: 115 RTLIRERLAEAFSKVAGEVEEMEK--KEQVRACDPVG--VAVSVESVLFKNMC------- 163
R + L + F + AG +E K + R + VG + ++E +++N+C
Sbjct: 280 RKNVANALIKLFVEQAGVAQEQGKFSIPEGRTKESVGEYLGFAIEQAMYQNLCGGSGEPN 339
Query: 164 -PF-------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
P+ LFNV+ KNP +L+G + P+ ++MAS+E + R+ +I+ +A
Sbjct: 340 DPYRQQMRTILFNVR--KNPSLRDSLLVGRITPDAFSKMSTQDMASEELRQRDDEIKREA 397
Query: 216 LAKIRDHSVVGE 227
R H ++ E
Sbjct: 398 E---RQHIIIQE 406
>gi|255582730|ref|XP_002532142.1| transcription elongation factor s-II, putative [Ricinus communis]
gi|223528178|gb|EEF30241.1| transcription elongation factor s-II, putative [Ricinus communis]
Length = 1154
Score = 38.9 bits (89), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +V+ GE+ PE L + EE+AS E
Sbjct: 420 LLFNLKDRNNPELRARVMSGEIPPEKLCSMTAEELASKE 458
>gi|242060932|ref|XP_002451755.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
gi|241931586|gb|EES04731.1| hypothetical protein SORBIDRAFT_04g007300 [Sorghum bicolor]
Length = 1087
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +VL G++ PE L + EE+AS E
Sbjct: 367 LLFNLKDKSNPELRERVLSGDIAPERLCSMTAEELASKE 405
>gi|367043846|ref|XP_003652303.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
gi|346999565|gb|AEO65967.1| hypothetical protein THITE_2113636 [Thielavia terrestris NRRL 8126]
Length = 293
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 35/53 (66%), Gaps = 1/53 (1%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI-REDAL 216
+ ++K NP+ R+VL GE+ PE V +E+AS+ +++R++++ RE+ L
Sbjct: 186 LMTSLKRKDNPELGRRVLGGEITPEKFVVMTDDELASEAQRARDRELERENML 238
>gi|413926158|gb|AFW66090.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1080
Score = 38.9 bits (89), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +VL G++ PE L + EE+AS E
Sbjct: 365 LLFNLKDKSNPELRERVLSGDIAPERLCSMTAEELASKE 403
>gi|326931937|ref|XP_003212080.1| PREDICTED: death-inducer obliterator 1-like [Meleagris gallopavo]
Length = 2496
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 39/134 (29%), Positives = 58/134 (43%), Gaps = 19/134 (14%)
Query: 84 MKKPLGQSQPPKQEQDRKTASAVEIKC--SDATRTLIRERLAEAFSKVAGEVEEMEKKEQ 141
+K+P S P + SAV I+ + R IR L E K + +++
Sbjct: 818 LKRPAPSSVPTASGSSQVKVSAVPIQSQPNSQIRQNIRRSLKEILWKRVNDSDDL----- 872
Query: 142 VRACDPVG-VAVSVESVLFK-----------NMCPFLFNVKDPKNPDFWRKVLLGEVKPE 189
V VG VA+++E +F +FN+KDPKN + +VL GE+
Sbjct: 873 VMTESEVGKVALNIEKEMFNLFQVTDNRYKSKYRSIMFNLKDPKNQGLFHRVLHGEISLS 932
Query: 190 TLVTALPEEMASDE 203
LV PEE+ S E
Sbjct: 933 KLVRMKPEELLSKE 946
>gi|356515496|ref|XP_003526436.1| PREDICTED: uncharacterized protein LOC100808809 [Glycine max]
Length = 1143
Score = 38.9 bits (89), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +V+ G++ PE L + EE+AS E
Sbjct: 443 LLFNLKDRNNPELRERVMFGKIPPEQLCSMTAEELASKE 481
>gi|221061105|ref|XP_002262122.1| transcription factor [Plasmodium knowlesi strain H]
gi|193811272|emb|CAQ42000.1| transcription factor, putative [Plasmodium knowlesi strain H]
Length = 407
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 1/52 (1%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIREDALA 217
FN+ D KNP F K+ + P+ + T +EMASDE++ RNK ++E A
Sbjct: 297 FNLCDKKNPSFNEKIYAEYISPKIIATMNSQEMASDEKKKERNKCLQESLQA 348
>gi|164661661|ref|XP_001731953.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
gi|159105854|gb|EDP44739.1| hypothetical protein MGL_1221 [Malassezia globosa CBS 7966]
Length = 304
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 7/70 (10%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVG 226
N+KD NP+ +KVL G + P LV EE+AS + + + IR+ L H+ G
Sbjct: 199 LNLKDKNNPELRQKVLEGHIDPGMLVVMRSEELASKSLKEQQESIRQQNL-----HNAKG 253
Query: 227 --EKELECDA 234
+E E DA
Sbjct: 254 AEAQEAETDA 263
>gi|115709498|ref|XP_797149.2| PREDICTED: uncharacterized protein LOC592539, partial
[Strongylocentrotus purpuratus]
Length = 403
Score = 38.9 bits (89), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN +R +L GE+ P LV +++AS E
Sbjct: 354 LIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQE 392
>gi|169618205|ref|XP_001802516.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
gi|111058985|gb|EAT80105.1| hypothetical protein SNOG_12292 [Phaeosphaeria nodorum SN15]
Length = 896
Score = 38.9 bits (89), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 2/51 (3%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
+FN K KNP ++L G +KP+ LV+ EEMAS+++Q IRE A
Sbjct: 378 IMFNAK--KNPILVDRLLSGSLKPQELVSMPTEEMASEDKQKEFAAIREAA 426
>gi|30689925|ref|NP_197934.2| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|26449758|dbj|BAC42002.1| putative PHD finger protein [Arabidopsis thaliana]
gi|332006074|gb|AED93457.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 735
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIREDALAKIR 220
LFN+KD NP+ V+ G++ PE L EE+AS E RQ++ +++ E + +R
Sbjct: 389 LLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAE--MVVLR 446
Query: 221 DHSV 224
D +
Sbjct: 447 DTDI 450
>gi|317418995|emb|CBN81033.1| Death-inducer obliterator 1 [Dicentrarchus labrax]
Length = 2389
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/102 (31%), Positives = 49/102 (48%), Gaps = 19/102 (18%)
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVG-VAVSVESVLFKNMC---------- 163
R IR L + K + ++++ E VG +AV++E +F N+C
Sbjct: 662 RQNIRRSLTDILYKRVSDSDDLKMTESE-----VGRLAVAIEKEMF-NLCLSTDSKYKNK 715
Query: 164 --PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KDPKN + +V+ GEV P LV EE+ S E
Sbjct: 716 YRSLMFNLKDPKNKGLFYRVVGGEVSPFRLVRLSAEELLSKE 757
>gi|403341216|gb|EJY69907.1| Transcription elongation factor TFIIS [Oxytricha trifallax]
Length = 340
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 48/107 (44%), Gaps = 11/107 (10%)
Query: 114 TRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMC---------- 163
T T R+ L F K EE + E++ + + +E L+K+
Sbjct: 168 TGTQYRDSLRINFIKYMQIPEEGVEYEEIVLTRAAQLGLQIEDELYKSFPRLAEYQNKAR 227
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNK 209
+FN+KDPKNPD ++ G ++P LV + +AS Q RNK
Sbjct: 228 SLMFNLKDPKNPDLRMSLIEGVIEPNQLVRLDSKSLASKALQDERNK 274
>gi|336369371|gb|EGN97713.1| hypothetical protein SERLA73DRAFT_184533 [Serpula lacrymans var.
lacrymans S7.3]
gi|336382153|gb|EGO23304.1| hypothetical protein SERLADRAFT_472264 [Serpula lacrymans var.
lacrymans S7.9]
Length = 298
Score = 38.5 bits (88), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 32/96 (33%), Positives = 48/96 (50%), Gaps = 5/96 (5%)
Query: 141 QVRACDPVGVA-VSVESVLFKNMCPFLF-NVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
+ RA + VA S SV +K+ LF N+KD NP ++ G++ E E
Sbjct: 165 RARAIESAVVAQFSGPSVEYKSKIRSLFVNLKDKNNPGLRESIVSGDLSVEKFGKMSSAE 224
Query: 199 MASDERQSRNKQIREDALAKIRDHSVVGEKELECDA 234
MAS+ER++ + +I+ED K E+E E DA
Sbjct: 225 MASEERKAADNKIKEDNFFKSLG---AAEQEAETDA 257
>gi|357607939|gb|EHJ65747.1| transcription elongation factor S-II [Danaus plexippus]
Length = 292
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 46/153 (30%), Positives = 65/153 (42%), Gaps = 33/153 (21%)
Query: 88 LGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRAC-D 146
L S PP+ T AV +KC RE L +A K+ GE AC
Sbjct: 117 LPASFPPQS----NTTDAVRLKC--------RELLTQAL-KIDGE--------NPNACAT 155
Query: 147 PVGVAVSVESVL---FKN--------MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTAL 195
P +A +E + FKN + + N+KDPKNP L G + L
Sbjct: 156 PEELAEDLEECIYAEFKNTDMRYKNRVRSRVANLKDPKNPTLRTNFLNGVINAARLAKMT 215
Query: 196 PEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
PEEMASDE + ++ ++A+ + +V G K
Sbjct: 216 PEEMASDEMKKLREKFIKEAIDDAQLATVQGTK 248
>gi|302507047|ref|XP_003015480.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
gi|291179052|gb|EFE34840.1| hypothetical protein ARB_06606 [Arthroderma benhamiae CBS 112371]
Length = 297
Score = 38.5 bits (88), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 45/184 (24%), Positives = 75/184 (40%), Gaps = 15/184 (8%)
Query: 58 KKFKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQEQ---DRKTASAVEIKCSDAT 114
KK +P S + K G A K + PP + D+ S +K D+
Sbjct: 83 KKTASPGSSDSPKPTPNGTGTPASATNDKAQSSNVPPDKRNWKADQVNTSVTNVKARDSC 142
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFNVKDPKN 174
L+ + L ++ V + K +V A + V M N+K+ N
Sbjct: 143 IGLMYDGLCLGSTESPQAV--LRKATEVEAAAFKAFGPENKEVYRTKMRSLFQNLKNKSN 200
Query: 175 PDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE------K 228
+VL EV PE V EE+ SDER+ +++I+++ + D ++VG+ K
Sbjct: 201 LSLRTRVLTNEVTPERFVNMTHEELKSDERREEDRKIQKENM----DKAMVGQPERSISK 256
Query: 229 ELEC 232
L+C
Sbjct: 257 SLQC 260
>gi|363741478|ref|XP_001234737.2| PREDICTED: death-inducer obliterator 1 [Gallus gallus]
Length = 2152
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 47/164 (28%), Positives = 67/164 (40%), Gaps = 22/164 (13%)
Query: 54 SVESKKFKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQEQDRKTASAVEIKC--S 111
SV SK P S KK A +K+P S P + SA+ I+ +
Sbjct: 704 SVPSKPSAPPGSSLPKKPVASSSLGAG---LKRPAPSSVPTASGSSQVKVSAIPIQSQPN 760
Query: 112 DATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVG-VAVSVESVLFK---------- 160
R IR L E K + +++ V VG VA+++E +F
Sbjct: 761 SQIRQNIRRSLKEILWKRVNDSDDL-----VMTESEVGKVALNIEKEMFNLFHVTDNRYK 815
Query: 161 -NMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KDPKN + +VL GE+ LV PEE+ S E
Sbjct: 816 SKYRSIMFNLKDPKNQGLFHRVLHGEISLSKLVRMKPEELLSKE 859
>gi|147841857|emb|CAN64736.1| hypothetical protein VITISV_043189 [Vitis vinifera]
Length = 1059
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +V+ GE+ PE L + EE+AS E
Sbjct: 434 LLFNLKDRNNPELRERVVAGEISPERLCSMTAEELASKE 472
>gi|322795023|gb|EFZ17875.1| hypothetical protein SINV_15581 [Solenopsis invicta]
Length = 695
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 44/176 (25%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 43 GLSTNQMKNRVSVESKK----FKAPSSRTNKKRKFEGEDQAAFPFMKKPLGQSQPPKQEQ 98
G + Q+K ++ S K K P S T + K + KK + P + +Q
Sbjct: 64 GNKSTQLKQTITTMSGKNPMVLKTPKSVTQVQLKTQAAGSPKQTSTKKQEAKPSPSQLKQ 123
Query: 99 DRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVL 158
+ T V+ ++ R IR+ L E S E E+++ ++ A +A ++E +
Sbjct: 124 TKLTP--VKKPETEPIRVNIRKTLTELLSSRIKETEDLKLTDEEIA----DLAFNIELEM 177
Query: 159 FK-----------NMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+K +FN+KD KN +RK+ + P+ +V P+EMAS E
Sbjct: 178 YKYFKDTGSKYKAKYRSLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQE 233
>gi|225430091|ref|XP_002281873.1| PREDICTED: uncharacterized protein LOC100267937 [Vitis vinifera]
Length = 1146
Score = 38.5 bits (88), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +V+ GE+ PE L + EE+AS E
Sbjct: 434 LLFNLKDRNNPELRERVVAGEISPERLCSMTAEELASKE 472
>gi|413936812|gb|AFW71363.1| putative SPOC domain / Transcription elongation factor S-II protein
[Zea mays]
Length = 1082
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +VL G++ PE L + EE+AS E
Sbjct: 370 LLFNLKDKSNPELRERVLSGDIVPERLCSMTAEELASKE 408
>gi|42573473|ref|NP_974833.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
gi|332006075|gb|AED93458.1| SPOC dand transcription elongation factor S-II domain protein
[Arabidopsis thaliana]
Length = 997
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIREDALAKIR 220
LFN+KD NP+ V+ G++ PE L EE+AS E RQ++ +++ E + +R
Sbjct: 389 LLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAE--MVVLR 446
Query: 221 DHSV 224
D +
Sbjct: 447 DTDI 450
>gi|296805870|ref|XP_002843759.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
gi|238845061|gb|EEQ34723.1| transcription elongation factor S-II [Arthroderma otae CBS 113480]
Length = 297
Score = 38.5 bits (88), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 151 AVSVESVLFKNMCP------------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
A VE+ F P N+K N +VL GEV P+ V+ EE
Sbjct: 165 ATEVEAAAFNTYGPETKESYRTKIRSLYQNLKQKSNLSLRTRVLTGEVTPDRFVSMTHEE 224
Query: 199 MASDERQSRNKQIREDALAKIRDHSVVGE------KELEC 232
+ SDER+ +++I+++ + D ++VG+ K L+C
Sbjct: 225 LKSDERREEDRKIQKENM----DKAMVGQPERSISKSLQC 260
>gi|393904020|gb|EJD73631.1| transcription elongation factor S-II [Loa loa]
Length = 310
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D KN VL+G V PE +EMASDE +++ ++ + A+
Sbjct: 204 VFNLRDKKNLVLRENVLIGAVTPEKFAVMTADEMASDEMKAQREKFTKQAI 254
>gi|402588846|gb|EJW82779.1| hypothetical protein WUBG_06311 [Wuchereria bancrofti]
Length = 154
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D KN VL+G V PE +EMASDE +++ ++ + A+
Sbjct: 48 VFNLRDKKNLVLRENVLIGAVTPEKFAVMTADEMASDEMKAQREKFTKQAI 98
>gi|402218151|gb|EJT98229.1| transcription elongation factor [Dacryopinax sp. DJM-731 SS1]
Length = 311
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
N+K+ NP V+ GE+ L T +EMAS+ERQ+ +K+I E L K +
Sbjct: 204 LYLNLKEKSNPGLREAVVSGELSVPRLCTMSVQEMASEERQAESKRIEEQNLFKAKGAEE 263
Query: 225 VG 226
G
Sbjct: 264 AG 265
>gi|326472154|gb|EGD96163.1| transcription elongation factor S-II [Trichophyton tonsurans CBS
112818]
gi|326476985|gb|EGE00995.1| transcription elongation factor S-II [Trichophyton equinum CBS
127.97]
Length = 297
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 46/100 (46%), Gaps = 22/100 (22%)
Query: 151 AVSVESVLFKNMCP------------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
A VE+ FK P N+K+ N +VL EV PE V EE
Sbjct: 165 ATDVEAAAFKAFGPETKEAYRTKIRSLYQNLKNKSNLSLRTRVLTNEVTPERFVNMTHEE 224
Query: 199 MASDERQSRNKQIREDALAKIRDHSVVGE------KELEC 232
+ SDER+ +++I+++ + D ++VG+ K L+C
Sbjct: 225 LKSDERREEDRKIQKENM----DKAMVGQPERSISKSLQC 260
>gi|296081928|emb|CBI20933.3| unnamed protein product [Vitis vinifera]
Length = 1097
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +V+ GE+ PE L + EE+AS E
Sbjct: 416 LLFNLKDRNNPELRERVVAGEISPERLCSMTAEELASKE 454
>gi|327348586|gb|EGE77443.1| PHD finger domain-containing protein [Ajellomyces dermatitidis ATCC
18188]
Length = 897
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 22/98 (22%)
Query: 146 DPVGVAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPET 190
+P+G+A+ E ++K++C LFNV+ KN +L+G + P+
Sbjct: 322 EPLGLAI--ELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDA 377
Query: 191 LVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
L T ++MAS E + ++ +I+ +A R H ++ E+
Sbjct: 378 LATMSTQDMASKELRQKDDEIKREAE---RQHIIIQEQ 412
>gi|261205282|ref|XP_002627378.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
gi|239592437|gb|EEQ75018.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
SLH14081]
Length = 873
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 22/98 (22%)
Query: 146 DPVGVAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPET 190
+P+G+A+ E ++K++C LFNV+ KN +L+G + P+
Sbjct: 298 EPLGLAI--ELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDA 353
Query: 191 LVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
L T ++MAS E + ++ +I+ +A R H ++ E+
Sbjct: 354 LATMSTQDMASKELRQKDDEIKREAE---RQHIIIQEQ 388
>gi|239611404|gb|EEQ88391.1| PHD finger domain-containing protein [Ajellomyces dermatitidis
ER-3]
Length = 873
Score = 38.5 bits (88), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 26/98 (26%), Positives = 50/98 (51%), Gaps = 22/98 (22%)
Query: 146 DPVGVAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPET 190
+P+G+A+ E ++K++C LFNV+ KN +L+G + P+
Sbjct: 298 EPLGLAI--ELAMYKHLCGGAGEPSEAYKQQMRTILFNVR--KNTSLRDSLLVGSISPDA 353
Query: 191 LVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
L T ++MAS E + ++ +I+ +A R H ++ E+
Sbjct: 354 LATMSTQDMASKELRQKDDEIKREAE---RQHIIIQEQ 388
>gi|357466369|ref|XP_003603469.1| Transcription elongation factor A protein [Medicago truncatula]
gi|355492517|gb|AES73720.1| Transcription elongation factor A protein [Medicago truncatula]
Length = 1132
Score = 38.5 bits (88), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
LFN+KD NP+ +V+ G++ PE L + EE+AS E
Sbjct: 422 LLFNLKDRNNPELRERVMFGKILPEQLCSMTAEELASKE 460
>gi|395329637|gb|EJF62023.1| transcription elongation factor [Dichomitus squalens LYAD-421 SS1]
Length = 300
Score = 38.1 bits (87), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 36/70 (51%), Gaps = 3/70 (4%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSV 224
N+KD NP V+ GE+ L +MAS+ER++ + +I+E+ L K
Sbjct: 193 LFVNLKDKNNPGLRECVISGELPVSKLCKMSSADMASEERKAADAKIKEENLFKTLG--- 249
Query: 225 VGEKELECDA 234
GE+E E DA
Sbjct: 250 AGEQEAETDA 259
>gi|312088616|ref|XP_003145930.1| hypothetical protein LOAG_10358 [Loa loa]
Length = 241
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D KN VL+G V PE +EMASDE +++ ++ + A+
Sbjct: 135 VFNLRDKKNLVLRENVLIGAVTPEKFAVMTADEMASDEMKAQREKFTKQAI 185
>gi|297808571|ref|XP_002872169.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
gi|297318006|gb|EFH48428.1| hypothetical protein ARALYDRAFT_489410 [Arabidopsis lyrata subsp.
lyrata]
Length = 1027
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 6/64 (9%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE----RQSRNKQIREDALAKIR 220
LFN+KD NP+ V+ G++ PE L EE+AS E RQ++ +++ E + +R
Sbjct: 383 LLFNLKDKNNPELRESVMSGKISPERLCNMTAEELASKELSQWRQAKAEEMAE--MVVLR 440
Query: 221 DHSV 224
D +
Sbjct: 441 DADI 444
>gi|440896934|gb|ELR48725.1| SPOC domain-containing protein 1, partial [Bos grunniens mutus]
Length = 1171
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 25/83 (30%), Positives = 41/83 (49%), Gaps = 18/83 (21%)
Query: 149 GVAVSVESVLFK-----------NMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTA--- 194
G+A +E+ LF LFN++DP+NP+ + KV+ G++ P LV
Sbjct: 580 GIAAGIEAALFNLTQATNGRYKTKYRSLLFNLRDPRNPELFLKVVHGDITPHGLVRMSSV 639
Query: 195 --LPEEMA--SDERQSRNKQIRE 213
P+E+A D+ + R +I E
Sbjct: 640 QLAPQELARWRDQEEKRGLEIIE 662
>gi|395856832|ref|XP_003800822.1| PREDICTED: SPOC domain-containing protein 1 [Otolemur garnettii]
Length = 1272
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 28/82 (34%), Positives = 42/82 (51%), Gaps = 18/82 (21%)
Query: 150 VAVSVESVLF----KNMCPF-------LFNVKDPKNPDFWRKVLLGEVKPETLV-----T 193
VA S+E+ LF C + LFN++DP+N D + KV+ G+V P LV
Sbjct: 709 VAASIEAALFDLTQGTNCRYKTKYRSLLFNLRDPRNMDLFLKVVHGDVSPHDLVRMSSIQ 768
Query: 194 ALPEEMA--SDERQSRNKQIRE 213
P+E+A D+ + R +I E
Sbjct: 769 LAPQELARWRDQEEKRGLEIIE 790
>gi|170579780|ref|XP_001894980.1| transcription elongation factor S-II (TFIIS) [Brugia malayi]
gi|158598237|gb|EDP36172.1| transcription elongation factor S-II (TFIIS), putative [Brugia
malayi]
Length = 305
Score = 38.1 bits (87), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D KN VL+G V PE +EMASDE +++ ++ + A+
Sbjct: 199 VFNLRDKKNLVLRENVLIGAVTPEKFAVMTADEMASDEMKAQREKFTKQAI 249
>gi|389743667|gb|EIM84851.1| transcription elongation factor [Stereum hirsutum FP-91666 SS1]
Length = 299
Score = 38.1 bits (87), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 33/54 (61%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAK 218
+ N+KD KNP V+ G++ L ++MAS+ER++ +K+I+E+ + K
Sbjct: 192 LVVNLKDKKNPGLRESVVSGDLPAAKLAKMTSQDMASEERKNADKKIKEENMFK 245
>gi|330921683|ref|XP_003299524.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
gi|311326749|gb|EFQ92363.1| hypothetical protein PTT_10532 [Pyrenophora teres f. teres 0-1]
Length = 306
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 28/105 (26%), Positives = 50/105 (47%), Gaps = 3/105 (2%)
Query: 112 DATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFNVKD 171
DA L+ + LA + E+ + K+ + A G SV M N+K
Sbjct: 149 DACVRLMYDGLAYMSEAMPDEILLVAKQVEAAAYTNAG---SVNDAYKAKMRSLFQNLKS 205
Query: 172 PKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
NP ++VL+GEV + V +EM SDER++ +++++ + +
Sbjct: 206 KSNPALRKRVLIGEVPAKRFVVMTHDEMKSDERRALDEKLKAENM 250
>gi|358367754|dbj|GAA84372.1| transcription elongation factor S-II [Aspergillus kawachii IFO
4308]
Length = 303
Score = 38.1 bits (87), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 47/91 (51%), Gaps = 16/91 (17%)
Query: 151 AVSVESVLFKNMCP------------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
A +VE+ F ++ P N+K+ NP +VL G+V PE V +E
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPSLRVRVLNGDVTPERFVRMSHDE 230
Query: 199 MASDERQSRNKQIREDALAKIRDHSVVGEKE 229
+ S+E+Q R+++I+++ + D ++V + E
Sbjct: 231 LRSEEQQERDRRIQKENM----DKAMVAQAE 257
>gi|157119415|ref|XP_001653370.1| transcription elongation factor s-ii [Aedes aegypti]
gi|108883153|gb|EAT47378.1| AAEL001496-PA [Aedes aegypti]
Length = 303
Score = 38.1 bits (87), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 29/47 (61%), Gaps = 1/47 (2%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIRE 213
N+KDPKNP + G + + L PEEMASDE ++ R++ ++E
Sbjct: 199 NLKDPKNPSLRSNFVSGAITAQRLAKMTPEEMASDEMKNLRDRFVKE 245
>gi|390348322|ref|XP_799219.3| PREDICTED: transcription elongation factor S-II-like
[Strongylocentrotus purpuratus]
Length = 306
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%), Gaps = 5/59 (8%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIRDHSVV 225
N++D KNPD R VL G + E + + EEMAS+ +Q R K +E I DH +
Sbjct: 202 NLQDSKNPDLRRMVLRGTIPAEKIASMAAEEMASEAMKQMRQKFTKE----AINDHQLA 256
>gi|124511836|ref|XP_001349051.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
gi|23498819|emb|CAD50896.1| transcription elongation factor s-II, putative [Plasmodium
falciparum 3D7]
Length = 403
Score = 37.7 bits (86), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQS-RNKQIREDALAKIRDHSV 224
FN+ D KNP+F KV + + L T ++MASDE+++ R K ++E LA D V
Sbjct: 293 FNLSDKKNPNFNEKVYSEFISSKALATMNSQDMASDEKKNERKKCLQESLLACQSDWDV 351
>gi|198450551|ref|XP_001358032.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
gi|198131086|gb|EAL27169.2| GA19664 [Drosophila pseudoobscura pseudoobscura]
Length = 2182
Score = 37.7 bits (86), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN + K+ +V+P+ LV PEE+AS E
Sbjct: 1508 LMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQE 1546
>gi|346466499|gb|AEO33094.1| hypothetical protein [Amblyomma maculatum]
Length = 313
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 57/135 (42%), Gaps = 32/135 (23%)
Query: 102 TASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN 161
T +AV +KC RE L+ A + E+M C+ G+A +E ++
Sbjct: 150 TTNAVRLKC--------RELLSSAL-----KCEDMPD-----GCNVDGLAAKIEESIYNE 191
Query: 162 MCPF-----------LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQ 210
+ N+KD +NP VL G + PE + EEMASDE + ++
Sbjct: 192 FGDTNMKYKNRVRSRVSNLKDSRNPALRLNVLHGAIDPERIARMSAEEMASDEMKELRQR 251
Query: 211 IREDALAKIRDHSVV 225
+++ I DH +
Sbjct: 252 FTKES---INDHQMA 263
>gi|324513389|gb|ADY45503.1| Transcription elongation factor S-II [Ascaris suum]
Length = 301
Score = 37.7 bits (86), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 19/51 (37%), Positives = 28/51 (54%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+FN++D KN VL G V P EEMASDE +S+ ++ + A+
Sbjct: 195 VFNLRDKKNAALRENVLTGVVTPAKFAVMTSEEMASDEMRSQREKFTKQAI 245
>gi|242795417|ref|XP_002482584.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
gi|218719172|gb|EED18592.1| transcription elongation factor S-II [Talaromyces stipitatus ATCC
10500]
Length = 296
Score = 37.7 bits (86), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 24/72 (33%), Positives = 41/72 (56%), Gaps = 5/72 (6%)
Query: 159 FKNMCPFLF-NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALA 217
+K LF N+K+ NP ++VL EV PE V EE+ SDER++ +++I ++ +
Sbjct: 183 YKTKIRSLFQNLKNKSNPQLRQRVLSNEVTPEKFVKMTHEELKSDERRALDEKIHKENM- 241
Query: 218 KIRDHSVVGEKE 229
D ++V + E
Sbjct: 242 ---DKAMVAQAE 250
>gi|195166102|ref|XP_002023874.1| GL27309 [Drosophila persimilis]
gi|194106034|gb|EDW28077.1| GL27309 [Drosophila persimilis]
Length = 2185
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 17/39 (43%), Positives = 25/39 (64%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN + K+ +V+P+ LV PEE+AS E
Sbjct: 1510 LMFNIKDRKNKTLFEKICAKQVEPKQLVAMTPEELASQE 1548
>gi|118347836|ref|XP_001007394.1| hypothetical protein TTHERM_00361840 [Tetrahymena thermophila]
gi|89289161|gb|EAR87149.1| hypothetical protein TTHERM_00361840 [Tetrahymena thermophila
SB210]
Length = 574
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 35/66 (53%), Gaps = 16/66 (24%)
Query: 150 VAVSVESVLF---------------KNMCPFLF-NVKDPKNPDFWRKVLLGEVKPETLVT 193
+AV +ES LF KN C LF ++KDP+N +F RK+L ++KP L T
Sbjct: 351 LAVEIESNLFNINNSHNKYALKEQYKNRCKILFVHLKDPQNFNFRRKILNKQMKPIQLCT 410
Query: 194 ALPEEM 199
+EM
Sbjct: 411 INEQEM 416
>gi|189203175|ref|XP_001937923.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187985022|gb|EDU50510.1| transcription elongation factor S-II [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 306
Score = 37.7 bits (86), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 23/78 (29%), Positives = 39/78 (50%), Gaps = 11/78 (14%)
Query: 150 VAVSVESVLFKN-----------MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
VA VE+ + N M N+K NP ++VL GEV + VT +E
Sbjct: 173 VAKQVEAAAYTNAGSVNDGYKAKMRSLFQNLKSKSNPALRKRVLTGEVPAKRFVTMTHDE 232
Query: 199 MASDERQSRNKQIREDAL 216
M SDER++ +++++ + +
Sbjct: 233 MKSDERRALDEKLKAENM 250
>gi|425778300|gb|EKV16434.1| hypothetical protein PDIP_35810 [Penicillium digitatum Pd1]
gi|425780677|gb|EKV18681.1| hypothetical protein PDIG_07750 [Penicillium digitatum PHI26]
Length = 880
Score = 37.4 bits (85), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 48/94 (51%), Gaps = 20/94 (21%)
Query: 150 VAVSVESVLFKNMC---------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
+A+S+E +++++C +FNVK KN ++++G + P+ L
Sbjct: 369 LALSIEDAMYESICGRSGEPNESYKAQLRSIMFNVK--KNASLRDRLIIGSLSPKLLSQM 426
Query: 195 LPEEMASDERQSRNKQIREDALAKIRDHSVVGEK 228
EMAS+E Q ++ +I+ +A R H +V E+
Sbjct: 427 TTAEMASEELQQKDAEIKREA---DRHHIIVQEE 457
>gi|326673092|ref|XP_686400.5| PREDICTED: hypothetical protein LOC553518 [Danio rerio]
Length = 1738
Score = 37.4 bits (85), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 19/39 (48%), Positives = 24/39 (61%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
FN+KD KN +++VL GEV P LV EE+AS E
Sbjct: 859 LTFNLKDAKNNVLFKRVLKGEVSPADLVRMTAEELASKE 897
>gi|114050769|ref|NP_001040406.1| transcription elongation factor S-II [Bombyx mori]
gi|95102774|gb|ABF51328.1| transcription elongation factor S-II [Bombyx mori]
Length = 288
Score = 37.4 bits (85), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVGE 227
N+KDPKNP G + L PEEMASDE + ++ ++A+ + +V G
Sbjct: 184 NLKDPKNPTLRTNFFNGVISASRLAKMTPEEMASDEMKKLREKFIKEAIDDAQLATVQGT 243
Query: 228 K 228
K
Sbjct: 244 K 244
>gi|410920567|ref|XP_003973755.1| PREDICTED: LOW QUALITY PROTEIN: death-inducer obliterator 1-like
[Takifugu rubripes]
Length = 2311
Score = 37.4 bits (85), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 35/123 (28%), Positives = 57/123 (46%), Gaps = 20/123 (16%)
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVG-VAVSVESVLFKNMC---------- 163
R IR L + K + ++++ E VG +A ++E +F N+C
Sbjct: 643 RQNIRRSLTDILYKRVSDSDDLKMTESE-----VGRLAFAIEKEMF-NLCLNTDSKYKNK 696
Query: 164 --PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIREDALAKIR 220
+FN+KDPKN + +V+ G+V P LV EE+ S E + R E+ + +R
Sbjct: 697 YRSLMFNLKDPKNKGLFYRVIGGDVTPFRLVRLSAEELLSKEMSEWRKPDAPEERGSGMR 756
Query: 221 DHS 223
HS
Sbjct: 757 AHS 759
>gi|355683932|gb|AER97239.1| death inducer-obliterator 1 [Mustela putorius furo]
Length = 804
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 24/39 (61%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KDPKN + +VL E+ LV PEE+AS E
Sbjct: 721 IMFNLKDPKNQGLFHRVLREEISSAKLVRMKPEELASKE 759
>gi|321454544|gb|EFX65711.1| hypothetical protein DAPPUDRAFT_32159 [Daphnia pulex]
Length = 338
Score = 37.4 bits (85), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 24/37 (64%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
FN+KDPKN +RK++ ++ P LV EE+AS E
Sbjct: 1 FNIKDPKNLGLFRKIIEKQITPGQLVKMSTEELASKE 37
>gi|357618039|gb|EHJ71135.1| hypothetical protein KGM_08149 [Danaus plexippus]
Length = 1879
Score = 37.4 bits (85), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE-RQSRNKQIR 212
+FN+KD KN W K+ + P+ LV PEE+AS E Q R+K+ +
Sbjct: 1056 LMFNIKDRKNLSLWEKICEKVITPKQLVRFSPEELASQELAQWRDKEAK 1104
>gi|4874303|gb|AAD31365.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 643
Score = 37.0 bits (84), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 41/84 (48%), Gaps = 15/84 (17%)
Query: 145 CDPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVT 193
DP +A +E+ LFK LFN+KD NP KV+ GE+ E L +
Sbjct: 263 LDPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCS 322
Query: 194 ALPEEMASDE----RQSRNKQIRE 213
EE+AS E RQ++ +++ +
Sbjct: 323 MSAEELASKELAEWRQAKAEEMAQ 346
>gi|290462619|gb|ADD24357.1| Transcription elongation factor S-II [Lepeophtheirus salmonis]
Length = 291
Score = 37.0 bits (84), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 29/101 (28%), Positives = 43/101 (42%), Gaps = 5/101 (4%)
Query: 108 IKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAV----SVESVLFKNMC 163
I +D R RE L A + ++ + K D + A+ S +KN
Sbjct: 122 IATTDDVRLRCREMLTNALKGIGSDLPDGICKSPEELADLIEEAIFSNFKSTSAKYKNQI 181
Query: 164 -PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KNP VL G ++P +EMAS+E
Sbjct: 182 RSRVFNLKDKKNPALRENVLTGIIEPSKFAVMTADEMASNE 222
>gi|389739651|gb|EIM80844.1| hypothetical protein STEHIDRAFT_162607 [Stereum hirsutum FP-91666
SS1]
Length = 904
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 22/85 (25%), Positives = 41/85 (48%), Gaps = 1/85 (1%)
Query: 86 KPLGQSQPPKQEQDRKTASAVEIKCSDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRAC 145
KP+ QS+P + + KTA + ++ T + R ++ + A + E + + ++
Sbjct: 412 KPVVQSEPSARFEILKTAESTDVFLQADTTGEFKSRSTQSSTSAAATIHAAEDR-KYKST 470
Query: 146 DPVGVAVSVESVLFKNMCPFLFNVK 170
V + S L NM PFLFN++
Sbjct: 471 QHVTTSDSSSRALASNMSPFLFNIQ 495
>gi|321466977|gb|EFX77969.1| hypothetical protein DAPPUDRAFT_53771 [Daphnia pulex]
Length = 299
Score = 37.0 bits (84), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 33/59 (55%)
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRDHSVVG 226
N+KD +NP+ L G+V P L EEMASDE ++ ++ ++++ + +V G
Sbjct: 195 NLKDARNPNLRLNFLCGQVSPARLSNMTSEEMASDEMKNIRQKFTKESINDAQLATVQG 253
>gi|51968872|dbj|BAD43128.1| putative transcription elongation factor S-II [Arabidopsis
thaliana]
Length = 745
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 146 DPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
DP +A +E+ LFK LFN+KD NP KV+ GE+ E L +
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 195 LPEEMASDE 203
EE+AS E
Sbjct: 375 SAEELASKE 383
>gi|297821975|ref|XP_002878870.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
gi|297324709|gb|EFH55129.1| hypothetical protein ARALYDRAFT_481416 [Arabidopsis lyrata subsp.
lyrata]
Length = 692
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 32/69 (46%), Gaps = 11/69 (15%)
Query: 146 DPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
DP +A +E+ LFK LFN KD NP KV+ GE+ E L +
Sbjct: 296 DPQVLAFEIEAELFKLFGGVNKKYKEKGRSLLFNFKDKSNPKLREKVMYGEIAAERLCSM 355
Query: 195 LPEEMASDE 203
EE+AS E
Sbjct: 356 SAEELASKE 364
>gi|145234013|ref|XP_001400379.1| transcription elongation factor S-II [Aspergillus niger CBS 513.88]
gi|134057319|emb|CAK44518.1| unnamed protein product [Aspergillus niger]
gi|350635099|gb|EHA23461.1| hypothetical protein ASPNIDRAFT_37464 [Aspergillus niger ATCC 1015]
Length = 303
Score = 37.0 bits (84), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 25/91 (27%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 151 AVSVESVLFKNMCP------------FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEE 198
A +VE+ F ++ P N+K+ NP +VL G+V PE V +E
Sbjct: 171 ASAVEAAAFSDLGPETKEQYRTKIRSLYQNLKNKSNPTLRVRVLNGDVTPEQFVRMSHDE 230
Query: 199 MASDERQSRNKQIREDALAKIRDHSVVGEKE 229
+ S E+Q R+++I+++ + D ++V + E
Sbjct: 231 LRSAEQQERDRKIQKENM----DKAMVAQAE 257
>gi|79563173|ref|NP_180135.2| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
gi|330252635|gb|AEC07729.1| SPOC domain / Transcription elongation factor S-II protein
[Arabidopsis thaliana]
Length = 745
Score = 37.0 bits (84), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 33/69 (47%), Gaps = 11/69 (15%)
Query: 146 DPVGVAVSVESVLFKNMC-----------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
DP +A +E+ LFK LFN+KD NP KV+ GE+ E L +
Sbjct: 315 DPQVLAFEIETELFKLFGGVNKKYKEKGRSLLFNLKDKSNPKLREKVMYGEIAAERLCSM 374
Query: 195 LPEEMASDE 203
EE+AS E
Sbjct: 375 SAEELASKE 383
>gi|91083709|ref|XP_969911.1| PREDICTED: similar to AGAP004866-PA [Tribolium castaneum]
gi|270007882|gb|EFA04330.1| hypothetical protein TcasGA2_TC014624 [Tribolium castaneum]
Length = 1612
Score = 37.0 bits (84), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 23/39 (58%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN WR++ + P LV P+++AS E
Sbjct: 879 LIFNIKDIKNQTLWRRICEKTINPYQLVRLSPDDLASQE 917
>gi|451851025|gb|EMD64326.1| hypothetical protein COCSADRAFT_171386 [Cochliobolus sativus
ND90Pr]
Length = 881
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 149 GVAVSVESVLFKNMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRN 208
G S F M +FNVK KN ++L G +K E LV+ EEMAS+++Q
Sbjct: 352 GEPTGGSSPYFGKMRTIMFNVK--KNTVLVDRLLSGSLKAEDLVSMEAEEMASEDKQREY 409
Query: 209 KQIREDA 215
+RE A
Sbjct: 410 AAMREAA 416
>gi|297807181|ref|XP_002871474.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
gi|297317311|gb|EFH47733.1| hypothetical protein ARALYDRAFT_350338 [Arabidopsis lyrata subsp.
lyrata]
Length = 819
Score = 37.0 bits (84), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 1/55 (1%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKI 219
LFN+KD NPD +V+ E+ E L + EE+AS E S+ +Q + + +AK+
Sbjct: 230 LLFNLKDKNNPDLRERVMSEEISAERLCSMTAEELASKEL-SQWRQAKAEEMAKM 283
>gi|410953420|ref|XP_003983369.1| PREDICTED: death-inducer obliterator 1 [Felis catus]
Length = 2093
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 52/202 (25%), Positives = 81/202 (40%), Gaps = 40/202 (19%)
Query: 62 APSSRTNKKRKFEGEDQAAFPFMKKPLGQSQP--PKQEQDRKTASAVEIKCSDATRTLIR 119
AP + T+ +K G A ++KP+ S P P T+S + + R IR
Sbjct: 616 APGTATSASKKSPGSAALAG-ALRKPVATSGPLAPPAPGRLGTSSPALSQPNSQIRQNIR 674
Query: 120 ERLAEAFSKVAGEVEEMEKKEQVRACDPVG-VAVSVESVLF-----------KNMCPFLF 167
L E K + +++ E VG +A+ +E LF +F
Sbjct: 675 RSLKEILWKRVNDSDDLIMTENE-----VGKIALHIEKELFNLFQVTDNRYKSKYRSIMF 729
Query: 168 NVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE------------RQSRNKQ----- 210
N+KDPKN + +VL E+ LV PEE+ S E +SRNKQ
Sbjct: 730 NLKDPKNQGLFHRVLREEISLAKLVRMKPEELVSKELSTWRERPTKPAMESRNKQHGDSK 789
Query: 211 ---IREDALAKIRDHSVVGEKE 229
++ DA+ + D V + +
Sbjct: 790 QTTVKRDAVPNMEDSPPVSDSD 811
>gi|169602463|ref|XP_001794653.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
gi|111066873|gb|EAT87993.1| hypothetical protein SNOG_04233 [Phaeosphaeria nodorum SN15]
Length = 301
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 37/68 (54%)
Query: 149 GVAVSVESVLFKNMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRN 208
G A SV + M N+K+ NP + VL G+++P+ V +EM SD R++ +
Sbjct: 178 GNAGSVNDAYKQKMRSLFQNLKNKSNPALRKDVLSGKIQPKKFVVMSHDEMKSDSRRAED 237
Query: 209 KQIREDAL 216
+++ ++ +
Sbjct: 238 EKLEKENM 245
>gi|195453902|ref|XP_002073994.1| GK14401 [Drosophila willistoni]
gi|194170079|gb|EDW84980.1| GK14401 [Drosophila willistoni]
Length = 2012
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 30/108 (27%), Positives = 49/108 (45%), Gaps = 15/108 (13%)
Query: 111 SDATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGV---AVSVESVLFKNMC---- 163
S+ R +R L E E +E K + ++ + V A SVES ++ +
Sbjct: 1282 SEPIRVNVRRTLKEQLLARIKEAQEANKDKAIKWLTSLEVEQFAKSVESEMYHSFGRDAG 1341
Query: 164 --------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN + K+ +V+P+ LV PE++AS E
Sbjct: 1342 AKYKSKYRSLMFNIKDRKNKTLFEKICAKQVEPKQLVRMTPEQLASQE 1389
>gi|19114535|ref|NP_593623.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe
972h-]
gi|1351227|sp|P49373.1|TFS2_SCHPO RecName: Full=Transcription elongation factor S-II; AltName:
Full=TFIIS
gi|924620|gb|AAA74048.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
gi|12038919|emb|CAC19733.1| transcription elongation factor TFIIS [Schizosaccharomyces pombe]
Length = 293
Score = 37.0 bits (84), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/93 (25%), Positives = 43/93 (46%), Gaps = 6/93 (6%)
Query: 124 EAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKNMCPFLFNVKDPKNPDFWRKVLL 183
E+ S + + +E++ + RA G S M N+KD NP VL
Sbjct: 151 ESSSLIIAKAKEIDAQVLARAAGKTG------SEYRNRMRSLYMNLKDKNNPKLRASVLR 204
Query: 184 GEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
E+ P+ L T E+AS++R+ + ++ ++ L
Sbjct: 205 NEITPQRLSTMTSAELASEDRRKEDAKLEQENL 237
>gi|384495291|gb|EIE85782.1| hypothetical protein RO3G_10492 [Rhizopus delemar RA 99-880]
Length = 511
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 22/121 (18%)
Query: 118 IRERLAEAFSKVAGEVEE--MEKKEQVRACDPV-----GVAVSVESVLFKNM------C- 163
+R + + S + + E +EK QV PV +A S+ES +F + C
Sbjct: 87 VRRNVVKNMSTILKSIMESAVEKDPQVFDGQPVQERAESLAKSIESTMFSQLGDRGRTCG 146
Query: 164 --------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDA 215
L N+KD N F +++ G++ P L+ E+MA+ E +S+ + +R+ +
Sbjct: 147 EVYKNKFRSLLHNLKDKANQTFQLRIVTGDLSPLELIKMSSEDMANPELKSKAEVLRQKS 206
Query: 216 L 216
L
Sbjct: 207 L 207
>gi|258575137|ref|XP_002541750.1| predicted protein [Uncinocarpus reesii 1704]
gi|237902016|gb|EEP76417.1| predicted protein [Uncinocarpus reesii 1704]
Length = 888
Score = 36.6 bits (83), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 35/136 (25%), Positives = 59/136 (43%), Gaps = 29/136 (21%)
Query: 116 TLIRERLAEAFSKV----AGEVEEMEK-----KEQVRACDPVGVAVSVESVLFKNMC--- 163
T R+ +A A K+ AG +E K +E R C + +++N+C
Sbjct: 313 TQARKNVANAIIKLFVEQAGVAQEQGKFSNSGRENERQCRRESGGSHLSKPMYQNLCGGS 372
Query: 164 ------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI 211
LFNV+ KNP +L+G + P+ ++MAS+E + R+ +I
Sbjct: 373 GEPNDAYKQQMRTILFNVR--KNPSLRDSLLVGRISPDAFSKMSTQDMASEELRQRDDEI 430
Query: 212 REDALAKIRDHSVVGE 227
+ +A R H +V E
Sbjct: 431 KREAE---RQHIIVQE 443
>gi|451996314|gb|EMD88781.1| hypothetical protein COCHEDRAFT_30093 [Cochliobolus heterostrophus
C5]
Length = 875
Score = 36.6 bits (83), Expect = 7.8, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 149 GVAVSVESVLFKNMCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRN 208
G S F M +FNVK KN ++L G +K E LV+ EEMAS+++Q
Sbjct: 352 GEPTGGSSPYFGKMRTIMFNVK--KNTVLVDRLLSGNLKAEDLVSMEAEEMASEDKQREY 409
Query: 209 KQIREDA 215
+RE A
Sbjct: 410 AAMREAA 416
>gi|390339426|ref|XP_780718.3| PREDICTED: uncharacterized protein LOC575208 [Strongylocentrotus
purpuratus]
Length = 2433
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/39 (41%), Positives = 24/39 (61%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN +R +L GE+ P LV +++AS E
Sbjct: 1325 LIFNIKDMKNKGLFRHILKGEISPRNLVRMSSDQLASQE 1363
>gi|225719828|gb|ACO15760.1| Transcription elongation factor A protein 1 [Caligus clemensi]
Length = 296
Score = 36.6 bits (83), Expect = 7.9, Method: Compositional matrix adjust.
Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 166 LFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN++D KNP VL G ++P +EMASDE
Sbjct: 190 VFNLRDKKNPALRENVLTGIIEPSKFAVMTADEMASDE 227
>gi|58268784|ref|XP_571548.1| positive transcription elongation factor [Cryptococcus neoformans
var. neoformans JEC21]
gi|134113304|ref|XP_774677.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50257321|gb|EAL20030.1| hypothetical protein CNBF3560 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227783|gb|AAW44241.1| positive transcription elongation factor, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 349
Score = 36.6 bits (83), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 162 MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRD 221
M N+KD NP +++LG V E + + +EMAS+ + ++I D L K +
Sbjct: 242 MRSLFLNLKDKGNPALRNEIVLGYVSTEKVASMSKDEMASESVRMLKEKIASDNLFKAK- 300
Query: 222 HSVVGEKELECDA 234
VG + E DA
Sbjct: 301 --AVGVTQAETDA 311
>gi|168050394|ref|XP_001777644.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670987|gb|EDQ57546.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1465
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKI 219
LFN+KD NP+ +V GE+ PE L E++AS E S + +E AL K+
Sbjct: 385 LLFNLKDKSNPELRARVFSGEIPPEDLCRMSGEQLASKEL-SDWRNAKEQALDKM 438
>gi|340719413|ref|XP_003398148.1| PREDICTED: hypothetical protein LOC100650691 [Bombus terrestris]
Length = 2365
Score = 36.6 bits (83), Expect = 8.1, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 47/100 (47%), Gaps = 15/100 (15%)
Query: 115 RTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFK-----------NMC 163
R IR+ L E S E E+++ ++ A +A ++E L+K
Sbjct: 1270 RLNIRKTLTELLSSRIKETEDLKLTDEEIA----DLAYNIELELYKYFKDTGAKYKAKYR 1325
Query: 164 PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDE 203
+FN+KD KN +RK+ + P+ +V P+EMAS E
Sbjct: 1326 SLVFNIKDTKNLTLFRKIADRSLTPDAVVRLSPDEMASQE 1365
>gi|67588103|ref|XP_665338.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis
TU502]
gi|54655975|gb|EAL35108.1| transcription elongation factor TFIIS.h [Cryptosporidium hominis]
Length = 332
Score = 36.6 bits (83), Expect = 8.4, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+N+ D KNP+ K+ +G++ PE + EMASD +Q ++ ++++L
Sbjct: 225 WNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQESL 274
>gi|321260424|ref|XP_003194932.1| positive transcription elongation factor [Cryptococcus gattii
WM276]
gi|317461404|gb|ADV23145.1| positive transcription elongation factor, putative [Cryptococcus
gattii WM276]
Length = 333
Score = 36.6 bits (83), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 36/73 (49%), Gaps = 3/73 (4%)
Query: 162 MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDALAKIRD 221
M N+KD NP +++LG + E + + +EMAS+ + ++I D L K +
Sbjct: 229 MRSLFLNLKDKGNPALRNEIVLGYISTEKVASMSKDEMASESVRMLKEKIASDNLFKAK- 287
Query: 222 HSVVGEKELECDA 234
VG + E DA
Sbjct: 288 --AVGVTQAETDA 298
>gi|443894971|dbj|GAC72317.1| transcription elongation factor TFIIS [Pseudozyma antarctica T-34]
Length = 321
Score = 36.6 bits (83), Expect = 8.6, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 13/69 (18%)
Query: 150 VAVSVESVLFKNMC-------------PFLFNVKDPKNPDFWRKVLLGEVKPETLVTALP 196
AV+VE+ + N N+KD NPD +V+ ++ + LVT
Sbjct: 186 AAVAVEAAILANQGKGSVTADYRNKVRSLSLNIKDKNNPDLRVRVVERDIAADKLVTMTN 245
Query: 197 EEMASDERQ 205
EE+ASD+R+
Sbjct: 246 EELASDKRK 254
>gi|344232834|gb|EGV64707.1| transcription elongation factor [Candida tenuis ATCC 10573]
Length = 286
Score = 36.6 bits (83), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/101 (25%), Positives = 47/101 (46%), Gaps = 22/101 (21%)
Query: 112 DATRTLIRERLAEAFSKVAGEVEEMEKKEQVRACDPVGVAVSVESVLFKN---------- 161
D+TR L A + +E + +Q+ + VA S+E+ +FK+
Sbjct: 124 DSTRNASISALYTALA-----IERGDSSQQI-----LSVAKSIEAEVFKDEYSKVADGYR 173
Query: 162 --MCPFLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMA 200
+ F+ N+++ KNP+ ++L G++ P V P EMA
Sbjct: 174 NKLRTFVMNLRNKKNPELRDRILSGQITPGKFVKMSPNEMA 214
>gi|116180542|ref|XP_001220120.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
gi|88185196|gb|EAQ92664.1| hypothetical protein CHGG_00899 [Chaetomium globosum CBS 148.51]
Length = 307
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%), Gaps = 1/53 (1%)
Query: 165 FLFNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQI-REDAL 216
+ ++K NP+ R+VL G++ PE EE+ASD ++ R+ + RE+ L
Sbjct: 200 LMTSLKRKDNPELGRRVLRGDIAPEKFAVMTDEELASDAQRERDAALERENML 252
>gi|66361609|ref|XP_627328.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
gi|46228708|gb|EAK89578.1| transcription elongation factor TFIIS [Cryptosporidium parvum Iowa
II]
Length = 332
Score = 36.6 bits (83), Expect = 8.9, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 31/50 (62%)
Query: 167 FNVKDPKNPDFWRKVLLGEVKPETLVTALPEEMASDERQSRNKQIREDAL 216
+N+ D KNP+ K+ +G++ PE + EMASD +Q ++ ++++L
Sbjct: 225 WNLSDLKNPELNSKLYVGKITPEEIARMQSREMASDAKQKEREKHKQESL 274
>gi|308510188|ref|XP_003117277.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
gi|308242191|gb|EFO86143.1| hypothetical protein CRE_01901 [Caenorhabditis remanei]
Length = 308
Score = 36.6 bits (83), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 30/83 (36%), Positives = 39/83 (46%), Gaps = 12/83 (14%)
Query: 146 DPVGVAVSVESVLF-------KNMCPF----LFNVKDPKNPDFWRKVLLGEVKPETLVTA 194
DP +AV +E L+ KN +FN++D KN VL G V+ E T
Sbjct: 171 DPEELAVQIEEKLYSVHRDTNKNYSAAVRSRIFNLRDKKNLALRENVLTGVVRAEKFATM 230
Query: 195 LPEEMASDE-RQSRNKQIREDAL 216
EEMAS E R R+K +E L
Sbjct: 231 TSEEMASPEIRNMRDKFTKEAIL 253
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.314 0.130 0.363
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,367,953,263
Number of Sequences: 23463169
Number of extensions: 125207276
Number of successful extensions: 304071
Number of sequences better than 100.0: 732
Number of HSP's better than 100.0 without gapping: 566
Number of HSP's successfully gapped in prelim test: 166
Number of HSP's that attempted gapping in prelim test: 303282
Number of HSP's gapped (non-prelim): 886
length of query: 235
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 97
effective length of database: 9,121,278,045
effective search space: 884763970365
effective search space used: 884763970365
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (22.0 bits)
S2: 74 (33.1 bits)